mRNA_C-linearis_contig102.772.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig102.772.1 vs. uniprot
Match: D7G1C2_ECTSI (Iron-sulfur cluster assembly protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C2_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 1.930e-84
Identity = 136/149 (91.28%), Postives = 141/149 (94.63%), Query Frame = 3

Query:  264 VRRSGAPALCQRRSYHDNIVEHYENPRNVGSLDKNNEFVGTGLVGAPACGDVMKLQIKVDKNGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGTVPKPAQHAEAA 710
            +RRSGA    QRRSYHDNIVEHYENPRNVGS+DK ++FVGTGLVGAPACGDVMKLQIKVD+NGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKG V KPAQHA AA
Sbjct:    1 MRRSGAAVAHQRRSYHDNIVEHYENPRNVGSMDKKDKFVGTGLVGAPACGDVMKLQIKVDENGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGAVAKPAQHALAA 149

[Close]

BLAST of mRNA_C-linearis_contig102.772.1 vs. uniprot
Match: A0A1Z5JMQ2_FISSO (Iron-sulfur cluster assembly protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMQ2_FISSO)

HSP 1 Score: 226 bits (575), Expect = 1.520e-66
Identity = 110/131 (83.97%), Postives = 121/131 (92.37%), Query Frame = 3

Query:  279 APALCQRRSYHDNIVEHYENPRNVGSLDKNNEFVGTGLVGAPACGDVMKLQIKVDKNGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDK 671
            A A   RR YH+NIVEHYENPRNVGSLDKN++ VGTGLVGAPACGDVMKLQIKVD+NG+ITESKFKTFGCGSAIASSSVATEW+KG+SVDE L IKN+DIA HLKLPPVKLHCSMLAEDAIKAA+KD ++K
Sbjct:   21 AAARLIRRGYHENIVEHYENPRNVGSLDKNDKSVGTGLVGAPACGDVMKLQIKVDENGIITESKFKTFGCGSAIASSSVATEWVKGKSVDEVLSIKNSDIASHLKLPPVKLHCSMLAEDAIKAAVKDWKEK 151

[Close]

BLAST of mRNA_C-linearis_contig102.772.1 vs. uniprot
Match: A0A7S3PWM6_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWM6_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.780e-66
Identity = 118/179 (65.92%), Postives = 136/179 (75.98%), Query Frame = 3

Query:  162 HPLTLPVLYSV--DFSATMNTMQNVARKSLGGSLSTVRRSGAPALCQRRSYHDNIVEHYENPRNVGSLDKNNEFVGTGLVGAPACGDVMKLQIKVDKNGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGTVPKPA 692
            HP T    Y+    FS   N +Q ++R     S     R+   +L Q+R YHD+IVEHYENPRNVGSL+K++  VGTGLVGAPACGDVMKLQIKVD NG I ESKFKTFGCGSAIASSSVATEW+KG++VDE L IKN+DIAGHLKLPPVKLHCSMLAEDAI+AA+ DL+ K    K A
Sbjct:   14 HPTTANPSYTPRHQFSMLSNAVQRLSRSVSRSSRVITSRASPASLVQKRGYHDSIVEHYENPRNVGSLNKDDSNVGTGLVGAPACGDVMKLQIKVDDNGQIIESKFKTFGCGSAIASSSVATEWVKGKTVDEVLAIKNSDIAGHLKLPPVKLHCSMLAEDAIRAAVSDLKSKQQKKKAA 192

[Close]

BLAST of mRNA_C-linearis_contig102.772.1 vs. uniprot
Match: A0A6U3XMM0_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3XMM0_9STRA)

HSP 1 Score: 222 bits (565), Expect = 3.330e-65
Identity = 106/136 (77.94%), Postives = 122/136 (89.71%), Query Frame = 3

Query:  264 VRRSGAPALCQRRSYHDNIVEHYENPRNVGSLDKNNEFVGTGLVGAPACGDVMKLQIKVDKNGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDK 671
            V  +G  +    R+YHDNIVEHYENPRNVGSLDKN+E+VGTGLVGAPACGDVMKLQI+VD+NGVITESKFKTFGCGSAIASSSV TEW++G+++DE++ IKN DIAG LKLPPVKLHCSMLAEDAIKAA+KD + K
Sbjct:   19 VNAAGRTSAGSARTYHDNIVEHYENPRNVGSLDKNSEYVGTGLVGAPACGDVMKLQIRVDENGVITESKFKTFGCGSAIASSSVMTEWVEGKTIDEAMAIKNKDIAGFLKLPPVKLHCSMLAEDAIKAAVKDYKSK 154

[Close]

BLAST of mRNA_C-linearis_contig102.772.1 vs. uniprot
Match: A0A5D6XWY5_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWY5_9STRA)

HSP 1 Score: 221 bits (564), Expect = 4.810e-65
Identity = 109/150 (72.67%), Postives = 126/150 (84.00%), Query Frame = 3

Query:  222 QNVARKSLGGSLSTVRRSGAPALCQRRSYHDNIVEHYENPRNVGSLDKNNEFVGTGLVGAPACGDVMKLQIKVDKNGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDK 671
            ++V ++SL  +LST     A    Q R YHDN+++HYENPRNVGS+DK+   VGTGLVGAPACGDVMKLQI+VD+NG I +SKFKTFGCGSAIASSSVATEWLKG++V+E L+IKNTDIA HLKLPPVKLHCSMLAEDAIKAAI D Q K
Sbjct:    4 RSVLKRSLASALSTRPAVAAAPALQMRRYHDNVIDHYENPRNVGSMDKSARNVGTGLVGAPACGDVMKLQIEVDENGTIVDSKFKTFGCGSAIASSSVATEWLKGKTVEECLQIKNTDIASHLKLPPVKLHCSMLAEDAIKAAISDYQKK 153

[Close]

BLAST of mRNA_C-linearis_contig102.772.1 vs. uniprot
Match: G4YNR1_PHYSP (Iron-sulfur cluster assembly protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=G4YNR1_PHYSP)

HSP 1 Score: 220 bits (560), Expect = 1.780e-64
Identity = 108/151 (71.52%), Postives = 129/151 (85.43%), Query Frame = 3

Query:  222 QNVARKSLGGSLSTVRRSGAPALCQR-RSYHDNIVEHYENPRNVGSLDKNNEFVGTGLVGAPACGDVMKLQIKVDKNGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDK 671
            ++  ++SLG   +  + + APA  Q+ R YH+N+++HYENPRNVG++DKN + VGTGLVGAPACGDVMKLQI+VD+NG I +SKFKTFGCGSAIASSSVATEWLKG+SV+E LKIKNTDIA HLKLPPVKLHCSMLAEDAIKAAI D + K
Sbjct:    4 RSALKRSLGAFSAARKAAPAPAFAQQTRMYHENVIDHYENPRNVGAMDKNAKDVGTGLVGAPACGDVMKLQIQVDENGTIVDSKFKTFGCGSAIASSSVATEWLKGKSVEECLKIKNTDIASHLKLPPVKLHCSMLAEDAIKAAISDYKRK 154

[Close]

BLAST of mRNA_C-linearis_contig102.772.1 vs. uniprot
Match: A0A8K1CUK2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUK2_PYTOL)

HSP 1 Score: 219 bits (559), Expect = 2.930e-64
Identity = 113/163 (69.33%), Postives = 129/163 (79.14%), Query Frame = 3

Query:  228 VARKSLGGSLSTV--------RRSGAPALCQRRSYHDNIVEHYENPRNVGSLDKNNEFVGTGLVGAPACGDVMKLQIKVDKNGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGTVPKPA 692
            +AR +L  SL++         R + A AL Q R YH+N+++HYENPRNVGSLDKN   VGTGLVGAPACGDVMKLQI+VD+NG I ESKFKTFGCGSAIASSSVATEWLKG++++E L IKNTDIA HLKLPPVKLHCSMLAEDAIKAAI D + K T    A
Sbjct:    2 IARSALKRSLTSALSAKGAVSRLAPASALGQARMYHENVIDHYENPRNVGSLDKNATDVGTGLVGAPACGDVMKLQIRVDENGTIIESKFKTFGCGSAIASSSVATEWLKGKTIEECLNIKNTDIASHLKLPPVKLHCSMLAEDAIKAAISDYKTKQTAKSSA 164

[Close]

BLAST of mRNA_C-linearis_contig102.772.1 vs. uniprot
Match: A0A6G0XIV5_9STRA (Iron-sulfur cluster assembly protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A6G0XIV5_9STRA)

HSP 1 Score: 218 bits (556), Expect = 5.560e-64
Identity = 106/139 (76.26%), Postives = 121/139 (87.05%), Query Frame = 3

Query:  255 LSTVRRSGAPALCQRRSYHDNIVEHYENPRNVGSLDKNNEFVGTGLVGAPACGDVMKLQIKVDKNGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDK 671
            L  VRR+  P+    R YH+NI++HYENPRNVGSLDK +  VGTGLVGAPACGDVMKLQI+VD+NG I +SKFKTFGCGSAIASSSVATEWLKG++VD+ L IKNTDIA HLKLPPVKLHCSMLAEDAIKAA++D +DK
Sbjct:    8 LRVVRRALTPSRVAVRMYHENIIDHYENPRNVGSLDKKSASVGTGLVGAPACGDVMKLQIEVDENGTIIDSKFKTFGCGSAIASSSVATEWLKGKNVDDCLSIKNTDIANHLKLPPVKLHCSMLAEDAIKAAVQDYKDK 146

[Close]

BLAST of mRNA_C-linearis_contig102.772.1 vs. uniprot
Match: A0A7R9U6U0_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6U0_9STRA)

HSP 1 Score: 218 bits (555), Expect = 9.470e-64
Identity = 105/125 (84.00%), Postives = 116/125 (92.80%), Query Frame = 3

Query:  297 RRSYHDNIVEHYENPRNVGSLDKNNEFVGTGLVGAPACGDVMKLQIKVDKNGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDK 671
            RRSYH N+V+HYENPRNVGSLD  +E VGTGLVGAPACGDVMKLQIKVD+NGV+TESKFKTFGCGSAIASSSVATEW++GR+VDE L IKNTDIA HLKLPPVKLHCSMLAEDAIKAA++D + K
Sbjct:   32 RRSYHANVVDHYENPRNVGSLDAKDESVGTGLVGAPACGDVMKLQIKVDENGVVTESKFKTFGCGSAIASSSVATEWMQGRTVDEVLAIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVQDWKSK 156

[Close]

BLAST of mRNA_C-linearis_contig102.772.1 vs. uniprot
Match: A0A448Z7H0_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7H0_9STRA)

HSP 1 Score: 218 bits (555), Expect = 1.010e-63
Identity = 106/139 (76.26%), Postives = 120/139 (86.33%), Query Frame = 3

Query:  276 GAPALCQRRSYHDNIVEHYENPRNVGSLDKNNEFVGTGLVGAPACGDVMKLQIKVDKNGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGTVPKPA 692
            G   L  +RSYH+NIVEHYENPRNVGS+DKN E VGTGLVGAPACGDVMKLQI+VD +G I ESKFKTFGCGSAIA+SSVATEW+KG++VDE+L +KN+DIA HLKLPPVKLHCSMLAEDAIKAA+KD + K    K A
Sbjct:   21 GGSTLVNKRSYHENIVEHYENPRNVGSMDKNEESVGTGLVGAPACGDVMKLQIRVDDDGNIVESKFKTFGCGSAIAASSVATEWVKGKNVDEALAVKNSDIAAHLKLPPVKLHCSMLAEDAIKAAVKDWKAKQDDKKTA 159

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig102.772.1 vs. uniprot

BLAST of mRNA_C-linearis_contig102.772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7G1C2_ECTSI	1.930e-84	91.28	Iron-sulfur cluster assembly protein n=1 Tax=Ectoc...	[more]
A0A1Z5JMQ2_FISSO	1.520e-66	83.97	Iron-sulfur cluster assembly protein n=2 Tax=Fistu...	[more]
A0A7S3PWM6_9STRA	1.780e-66	65.92	Iron-sulfur cluster assembly protein n=1 Tax=Chaet...	[more]
A0A6U3XMM0_9STRA	3.330e-65	77.94	Iron-sulfur cluster assembly protein n=1 Tax=Dicty...	[more]
A0A5D6XWY5_9STRA	4.810e-65	72.67	Iron-sulfur cluster assembly protein n=1 Tax=Pythi...	[more]
G4YNR1_PHYSP	1.780e-64	71.52	Iron-sulfur cluster assembly protein n=21 Tax=Pero...	[more]
A0A8K1CUK2_PYTOL	2.930e-64	69.33	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A6G0XIV5_9STRA	5.560e-64	76.26	Iron-sulfur cluster assembly protein n=2 Tax=Eukar...	[more]
A0A7R9U6U0_9STRA	9.470e-64	84.00	Iron-sulfur cluster assembly protein n=1 Tax=Pingu...	[more]
A0A448Z7H0_9STRA	1.010e-63	76.26	Iron-sulfur cluster assembly protein n=1 Tax=Pseud...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	275.4
Seed ortholog evalue	1.8e-71
Seed eggNOG ortholog	2880.D7G1C2
Preferred name	ISCU
KEGG ko	ko:K22068
Hectar predicted targeting category	other localisation
GOs	GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0005198,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008033,GO:0008150,GO:0008152,GO:0008198,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0031974,GO:0032947,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044571,GO:0046483,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097428,GO:0098771,GO:1901360,GO:1901564,GO:1990221
EggNOG free text desc.	iron-sulfur transferase activity
EggNOG OGs	COG0822@1,KOG3361@2759
Ec32 ortholog description	ISC system FeS cluster assembly, IscU scaffold
Ec32 ortholog	Ec-00_005560.1
COG Functional cat.	C
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko03029
Exons	4
Model size	2116
Cds size	504
Stop	1
Start	1