Homology
BLAST of mRNA_C-linearis_contig102.771.1 vs. uniprot
Match:
A0A8J2T2D7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2D7_9STRA)
HSP 1 Score: 137 bits (346), Expect = 1.980e-33
Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 1
Query: 82 RLTPFMLFYTEHRDAVKSRITKANTACNPADISREICRLWQRLSPQQTKGYCLLSNLYVESLAKHGASGGIQ-----AKSAGKRQKDPRLPKPPVSSFMWFSRHHRAVLRNGNSELSFGEIGKAVGVLWKSADAAARRPFDDLAAEDKARYARELADYKARLIQTQ 564
RLTPFMLFY E RD V+ K + P ++S EI R W+ L Q++ Y +LS Y E S + K +R KDPR PK S++M+FS+HHR +L+ N+ L+FG++GK VG +WK+A ++PF+DLAA D+ARYAREL +YK + Q
Sbjct: 5 RLTPFMLFYCEVRDKVE----KESPKLQPHEVSSEIARRWKALPADQSRAYSVLSATYAEQKKFQKDSPKVPPSPKPVKKRKERYKDPRAPKSATSAYMYFSKHHRTLLKRENASLTFGDLGKTVGAMWKAATPGEKKPFEDLAARDRARYARELEEYKKERLAEQ 166
BLAST of mRNA_C-linearis_contig102.771.1 vs. uniprot
Match:
A0A7S3JW32_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW32_9STRA)
HSP 1 Score: 133 bits (334), Expect = 1.100e-30
Identity = 74/172 (43.02%), Postives = 106/172 (61.63%), Query Frame = 1
Query: 82 RLTPFMLFYTEHRDAVKSRITKANTACNPADISREICRLWQRLSPQQTKGYCLLSNLYVE-----SLAKH------------GASGGIQAKSAGKRQKDPRLPKPPVSSFMWFSRHHRAVLRNGNSELSFGEIGKAVGVLWKSADAAARRPFDDLAAEDKARYARELADYKA 546
RLTPFMLF+ EH+D V+ +AN + P ++S+ I W+ L+P++ + Y +LS Y E SLA +G AK GK +KDP+ PK S++M+FS+HHR +L+ NS L+FG++GK VG +WK+A +RPF++LAAEDK RY EL DYK+
Sbjct: 4 RLTPFMLFFCEHKDVVQ----QANPSAAPHEVSQIIADNWKALAPEKARAYSVLSATYTEQKKANSLATSKXXXXXXXXXXXXETGNGGAKVNGK-EKDPKAPKSATSAYMYFSKHHRMLLKQENSYLTFGDLGKTVGAMWKAATPEEKRPFEELAAEDKNRYVNELHDYKS 170
BLAST of mRNA_C-linearis_contig102.771.1 vs. uniprot
Match:
A0A6H5JGF1_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF1_9PHAE)
HSP 1 Score: 108 bits (271), Expect = 6.190e-22
Identity = 53/74 (71.62%), Postives = 61/74 (82.43%), Query Frame = 1
Query: 361 MWFSRHHRAVLRNGNSELSFGEIGKAVGVLWKSADAAARRPFDDLAAEDKARYARELADYKARLIQTQGSRERE 582
MWFSRHHRA+LR N E+SF +IGKAVGVLWKSA +RPFDDL+AEDKARYARELA+YKA L+ QGS E +
Sbjct: 1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLLLKQGSTENK 74
BLAST of mRNA_C-linearis_contig102.771.1 vs. uniprot
Match:
A0A4V5NCD6_9BASI (Non-histone chromosomal protein 6 n=1 Tax=Rhodotorula sp. CCFEE 5036 TaxID=1965284 RepID=A0A4V5NCD6_9BASI)
HSP 1 Score: 85.1 bits (209), Expect = 8.750e-16
Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 265 LAKHGASGGIQAKSAGKRQKDPRLPKPPVSSFMWFSRHHRAVLRNGNSELSFGEIGKAVGVLWKSADAAARRPFDDLAAEDKARYARELADYKA 546
+ K G + +A +A K +KDP PK P+S++M FS+ RA ++ +++FGEIGK +G WK AD A R+P++D AA +KARY +E A Y A
Sbjct: 1 MPKEGKTRSGKATAAAKPKKDPNAPKRPLSAYMLFSQDKRAEVKEEKPDVTFGEIGKILGAKWKEADEAERKPYEDKAAAEKARYEKEKAAYDA 94
BLAST of mRNA_C-linearis_contig102.771.1 vs. uniprot
Match:
A0A5C5G4Q3_9BASI (High mobility group box domain-containing protein n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5G4Q3_9BASI)
HSP 1 Score: 79.7 bits (195), Expect = 3.870e-14
Identity = 38/87 (43.68%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 295 QAKSAGKRQKDPRLPKPPVSSFMWFSRHHRAVLRNGNSELSFGEIGKAVGVLWKSADAAARRPFDDLAAEDKARYARELADYKARLI 555
+A +A K +KDP PK P+S++M FS+ R+V++ N +++FGEIGK +GV WK A ++P+++ A DK RY +E A Y RL+
Sbjct: 11 KATAAAKPKKDPNAPKRPLSAYMHFSQDMRSVVKEENPDVTFGEIGKLLGVKWKEATENDKKPYEEKAKADKERYEKEKAAYDVRLL 97
BLAST of mRNA_C-linearis_contig102.771.1 vs. uniprot
Match:
F0YAN0_AURAN (HMG box domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAN0_AURAN)
HSP 1 Score: 78.2 bits (191), Expect = 6.080e-14
Identity = 32/64 (50.00%), Postives = 50/64 (78.12%), Query Frame = 1
Query: 349 VSSFMWFSRHHRAVLRNGNSELSFGEIGKAVGVLWKSADAAARRPFDDLAAEDKARYARELADY 540
S++M+FS+HHR +L+ NS+L+FG++GK VG +WK+A ++PF+DLAA D+ RY EL++Y
Sbjct: 20 TSAYMYFSKHHRLLLKRENSDLTFGDLGKTVGAMWKAATPQEKKPFEDLAAADRTRYNSELSEY 83
BLAST of mRNA_C-linearis_contig102.771.1 vs. uniprot
Match:
D7G1C1_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C1_ECTSI)
HSP 1 Score: 77.4 bits (189), Expect = 6.860e-14
Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 1
Query: 361 MWFSRHHRAVLRNGNSELSFGEIGKAVGVLWKSADAAARRPFDDLAAE 504
MWFSRHHRA+LR N E+SF +IGKAVGVLWKSA +RPFDDL+AE
Sbjct: 1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAE 48
BLAST of mRNA_C-linearis_contig102.771.1 vs. uniprot
Match:
F4RQM9_MELLP (HMG box domain-containing protein (Fragment) n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4RQM9_MELLP)
HSP 1 Score: 77.0 bits (188), Expect = 1.500e-13
Identity = 34/77 (44.16%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 313 KRQKDPRLPKPPVSSFMWFSRHHRAVLRNGNSELSFGEIGKAVGVLWKSADAAARRPFDDLAAEDKARYARELADYK 543
KR+KDP PK P+S++M+FS+ R ++ N E+SFGEIG+ +G+ WKS ++P++D+A DK R+ E A+Y+
Sbjct: 5 KREKDPNAPKRPLSAYMFFSQDWRERIKTENPEVSFGEIGRLLGLKWKSLGEEEKKPYEDMACRDKKRHETEKAEYE 81
BLAST of mRNA_C-linearis_contig102.771.1 vs. uniprot
Match:
A0A1B6F3S3_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6F3S3_9HEMI)
HSP 1 Score: 84.7 bits (208), Expect = 1.660e-13
Identity = 48/170 (28.24%), Postives = 84/170 (49.41%), Query Frame = 1
Query: 79 GRLTPFMLFYTEHRDAVKSRITKANTACNPADISREICRLWQRLSPQQTKGYCLLSNL----YVESLAKHGASGGIQAKSAGKRQ--KDPRLPKPPVSSFMWFSRHHRAVLRNGNSELSFGEIGKAVGVLWKSADAAARRPFDDLAAEDKARYARELADYKARLIQTQGS 570
GR+T + F R+ K + N A+ S++ W+ +S + K + + + Y E + + G++ + KR+ KDP PK +S+F WF R+ ++ N +LS G+I K +G W + R ++ +A +DKARY +E++DYK QT +
Sbjct: 216 GRMTAYAYFVQTCREEHKKMHPEENVVF--AEFSKKCAERWKSMSDEDKKRFQEKAEIDKIRYEEQMKDYTPPDGVEKRGGKKRKQIKDPNAPKKSISAFFWFCHDERSKVKQDNPDLSMGDISKVLGRRWADVNPEIRMKYESMAIQDKARYEKEMSDYKNGQKQTDNA 383
BLAST of mRNA_C-linearis_contig102.771.1 vs. uniprot
Match:
A0A0L0V1A0_9BASI (HMG box domain-containing protein n=2 Tax=Puccinia striiformis TaxID=27350 RepID=A0A0L0V1A0_9BASI)
HSP 1 Score: 75.5 bits (184), Expect = 1.030e-12
Identity = 33/77 (42.86%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 313 KRQKDPRLPKPPVSSFMWFSRHHRAVLRNGNSELSFGEIGKAVGVLWKSADAAARRPFDDLAAEDKARYARELADYK 543
K++KDP PK P+S++M+FS+ R ++ N E+SFGEIG+ +G+ WK ++P++D+AA DK R+ E A+Y+
Sbjct: 28 KKEKDPNAPKRPLSAYMFFSQDWRERIKTENPEVSFGEIGRLLGLKWKGLTDEEKKPYEDMAARDKKRHEAEKAEYE 104
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.771.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.98e-33 / Id = 43.37 Expect = 1.10e-30 / Id = 43.02 Expect = 6.19e-22 / Id = 71.62 Expect = 8.75e-16 / Id = 44.68 Expect = 3.87e-14 / Id = 43.68 Expect = 6.08e-14 / Id = 50.00 Expect = 6.86e-14 / Id = 72.92 Expect = 1.50e-13 / Id = 44.16 Expect = 1.66e-13 / Id = 28.24 Expect = 1.03e-12 / Id = 42.86 Sequence A0A8J2T2D7_9STRA A0A7S3JW32_9STRA A0A6H5JGF1_9PHAE A0A4V5NCD6_9BASI A0A5C5G4Q3_9BASI F0YAN0_AURAN D7G1C1_ECTSI F4RQM9_MELLP A0A1B6F3S3_9HEMI A0A0L0V1A0_9BASI Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Fungi Seed ortholog score 80.9 Seed ortholog evalue 1.7e-12 Seed eggNOG ortholog 5286.M7X9L2 Preferred name NHP6 Hectar predicted targeting category other localisation GOs GO:0000228,GO:0000785,GO:0000790,GO:0001192,GO:0001195,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006338,GO:0006351,GO:0006352,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006383,GO:0006384,GO:0006385,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031491,GO:0031497,GO:0031974,GO:0031981,GO:0032774,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034724,GO:0034728,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051123,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0051716,GO:0060255,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070897,GO:0070898,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 EggNOG free text desc. high mobility group EggNOG OGs 2YEUW@29000,3A6QT@33154,3P5CR@4751,3V1M3@5204,COG5648@1,KOG0381@2759 COG Functional cat. K Best tax level Pucciniomycotina Best eggNOG OG NA|NA|NA Exons 3 Model size 2972 Cds size 1335 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927368.0355408-UTR-C-linearis_contig102:171595..171655 1622927368.0355408-UTR-C-linearis_contig102:171595..171655 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig102 171596..171655 + 1690879657.5306382-UTR-C-linearis_contig102:171595..171655 1690879657.5306382-UTR-C-linearis_contig102:171595..171655 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig102 171596..171655 + 1622927368.0833256-UTR-C-linearis_contig102:173851..175428 1622927368.0833256-UTR-C-linearis_contig102:173851..175428 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig102 173852..175428 + 1690879657.5776649-UTR-C-linearis_contig102:173851..175428 1690879657.5776649-UTR-C-linearis_contig102:173851..175428 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig102 173852..175428 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927368.0475535-CDS-C-linearis_contig102:171655..172099 1622927368.0475535-CDS-C-linearis_contig102:171655..172099 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 171656..172099 + 1690879657.5423365-CDS-C-linearis_contig102:171655..172099 1690879657.5423365-CDS-C-linearis_contig102:171655..172099 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 171656..172099 + 1622927368.0568879-CDS-C-linearis_contig102:172926..173786 1622927368.0568879-CDS-C-linearis_contig102:172926..173786 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 172927..173786 + 1690879657.5513742-CDS-C-linearis_contig102:172926..173786 1690879657.5513742-CDS-C-linearis_contig102:172926..173786 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 172927..173786 + 1622927368.0696566-CDS-C-linearis_contig102:173820..173851 1622927368.0696566-CDS-C-linearis_contig102:173820..173851 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 173821..173851 + 1690879657.5637794-CDS-C-linearis_contig102:173820..173851 1690879657.5637794-CDS-C-linearis_contig102:173820..173851 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 173821..173851 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig102.771.1
>prot_C-linearis_contig102.771.1 ID=prot_C-linearis_contig102.771.1|Name=mRNA_C-linearis_contig102.771.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=445bp
MDALVVGRLTPFMLFYTEHRDAVKSRITKANTACNPADISREICRLWQRL back to top mRNA from alignment at C-linearis_contig102:171596..175428+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig102.771.1 ID=mRNA_C-linearis_contig102.771.1|Name=mRNA_C-linearis_contig102.771.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3833bp|location=Sequence derived from alignment at C-linearis_contig102:171596..175428+ (Chordaria linearis ClinC8C monoicous)CGACGTGTGACATCTCGCAGTCCGCGTAGGGGTGTGGGGCGTCAGCGTTT
TCCCGTTATT ATGGACGCACTCGTGGTGGGAAGGCTTACGCCGTTCATGC
TCTTCTACACGGAGCACCGAGACGCGGTCAAGTCAAGAATCACCAAGGCC
AACACGGCCTGCAACCCGGCCGACATCAGCAGAGAGATATGTCGGCTCTG
GCAGCGCCTCAGCCCGCAGCAGACCAAGGGCTACTGCCTCCTCTCCAACC
TCTACGTGGAGAGCCTCGCGAAGCACGGCGCCAGCGGCGGCATCCAGGCC
AAGAGCGCAGGCAAGCGGCAGAAAGACCCCCGTCTGCCCAAGCCTCCCGT
GAGTTCGTTCATGTGGTTTTCTCGACACCACCGTGCCGTGCTCAGGAACG
GCAATAGCGAGCTGAGCTTCGGCGAGATCGGGAAGGCGGTCGGGGTGCTG
TGGAAGTCGGCGGATGCGGCGGCGAGGCGGCCTTTCGACGATCTCGCGGC
CGAG GTATGTTGGCGTTGATGTCGGGCCCTCGAATTGAAATGATTCTCAT
GCGAGGTACCCAGCAGACAGCAGACAGGGTTCGATCACATCATCCGCCGA
TCAGCCGGGAGGTGCAGAGTACCGTTACATTTATGCACGCGACAGGGCCT
ATGCACGAGGCGTGACGTTGGCGTAACAACACACATCCTGGGCCCAGGAA
TAGTACCCTAAAGGTAGCGAATCAGAAAGGATAGAAACGCTTTCTGCTGG
AATACGCACACAAAATCTACTTGGAAACAAACACTCCGCCTCGCACACCG
ACGGCCGCCCCCCCCCACCCTTGTGGGTTCAGGGGCGGTCGCTCCCACCA
AAAGAGGTACCAGGTAGCCGATGATAGATGTGTCGGCAATAGAAGGGATG
CGATTCCCTCAATGGCCTTCCATGTCCGCATACCGACGGCGGGGGAGAAG
GGGGAGAAGGGCGCGGGTCGGGTTTGGCCAGGTGACGCACCATTCCTCTT
TCAGCGTGTTCAATCACTCCCAACGAGGCGCTTTTTTCTTCATTTAGTTG
TAGTGAAGAGGAGGAGGCAGGCTACGAAAAATCATTAATGGGCGAGAAAA
CAACAACAACAACAACAACAACAAACAAGGGTGCTTACAATACTATGCTC
CAAAACTACCCTCTGTTACTCCATTTCAGGCGGGACGGTTCTGGCTACTT
TCATTCCCTGGCGTCTCCCATTAGGGCACCGGTTGGCTCTTCTCATCCGT
AAGCACTCTCTCATGTTTCGCACCCGCTTATTTAGTGTGTTGTTGCGTCT
ACGTCTACTTCTGGCCTGCTGTCGTTGCCAGGACAAAGCACGGTATGCTC
GGGAGCTCGCCGACTACAAGGCCCGACTCATCCAGACGCAGGGCTCAAGG
GAAAGGGAAGCCGGCGAACTGGCGGTGGCGGCGGCAGCGGCGCCGGCGCC
GGGGGCGGGGGCGGCGGCAACGGCACCAGCAACACCGACAGGCATAGGTA
CCGGGGCTGAAGCGGCTGCTGCTGCGACGACTTTGTCGGCATCAATGGGA
GTAACGCCCTCACCAAGGCACACTCCTCTTGCCCCGGCGGCCCCAGCGCC
GTCAGGGATAGCGGATGCTGCCGTGTCATCTGCCGGTAGAACACTGCTAT
CGAGTGTCGCCGGTGCCGCTGAGCGCGAGCGTGTCGTCTCCGCCACGGCC
CCTGCCGCCGCTACCGCTACCGCCCCTCCATCCCTACCGCCGCCACTACC
GCCGCCGCCGCCGCTTTCGTCCTCTTTTCCCGACCGTTCGTCGCAAGGTA
GTGCCATGAGGATGGCGATGGGGCGCTCGCAGGCCAAGAGACAAAGGCAA
GAGGAGACTGCTGTTGCCGCTGGTGGTGGCAACGGTATATCCACCGCTTC
TCCTCCTGGTGGTGCAATCGCCGGTGGTATTCCTGCCGCTACGATGGGGG
GTGTTGTTGTCACGGCAACTGCACCGGAGCCACTGGCCGCGAGCCGTAGG
GAACACCCCCCCCACCTAGCGCAGCAGCAGCAGCAAGAAGAGCAGTACCA
CCAGGCGCGACAACAGCAGCATCGGCAGCAACCATATGCGCCGCACTATC
CGCACGCACATCCTCAGCAGCAGCCCAAGCAGCAACCCCAGCAGCTGCAG
CAGCAACAACCCCAGCAGCTGCAGCAGCAGCAGCAGCAGCA GCAGCAGCA
GCAGCAGCAGCAGCAATATATCCAGCAACATCACCACCATCAGCTGGGCG
GTGTGA GAACCGATCCCCCCGTTGTGGTGTCTCAGCCTTCTCTCCAATAC
AGTGTTTGATTTAGCCGTCTCGCTGCCTCGGCGCGGGGCGAGCGCCTGCA
AGGGTAATATAGAGTGCAGTGTGCGATGTGCGATATCTGGAGAAGGCCCC
ATGGGATAGAGACGCAAGACGCGTCCGGTGGGGGGCGGTTGCGGCAGAAT
AAGCACCTACGGGATATTTTGCAGGGCACGAAGAGATCGCTCGCGTCGTT
CCTCGAGTGAGGAGAACGGATATACGGAGGTATACTCCGTCTGGTCGTTG
TCAAAGCAGTTCCTATCTATGCACCTGATGTGCGGTTAGCGCCTTCCGCC
CACCCTTGCCCGTATCCCGTATCCCGTATCCCGTGTGGAGGTTAATGGTT
TTCCTGGTTTCTGTCACGACACCCTTTTAGCTAGTCAGAGAGCCAGGTTG
AGTTGATTTGCAGCTTACTCTCAGGAGAGTTCGGTGTAGTGGTTGTTGGT
GAAGCTTGTTGTGTGTTTGTTGTGTTGGTGCGGTGCGCTGCCTCTTTGAC
CCCCGTTAGTTGTTTTTAAGCGCGCAGACCGACGTGCCCCCTCCCCTTCT
ATTGTTACTGCTTTTACACAAGCAGCCTTTGTTCCTTAACTTATATCGGC
TTGAAATGGCTTTTCTCCCGAACATGTATATAGTTCTTGGAGGAGAGCGG
GTGAAGGGGCGCAATCCTTCAGTGTAGGAGGGGGGGGGGGTCGGCTGCCG
CTCCTTGTGCCCTGAATTGCTGCGCAGCGTGTCTTGGGCATTTGTTTATT
TTCGAGCTGAGGCACCCCTTCAGGGAAGATGCGGCCATCGGTTGATGTTC
TTGTGGTGTAGAACCTTAGCAATTGTTTGTGTTACCTGGGTTCCTCTTCC
AGTGGAAGTTGAAGCCGCCAGCCAGATGTCTAGCCCTGATAAAAAAAAAC
ATGTTCTCGTCAAGGCGGTTAAAAAACGACGGCGGTTTCTTGGCTTCCGT
GCGAGTGTTTCTTGTCTTTTTGTCCTTCATGCATGGACCCCGAGAATGAA
AAGAAGTGTCTCGTTGTTTTTCATCTGGGGATTTCGGCAGTCTATTCAGC
TGTGGTAAACGACTGTGGTCGGTGGGTGCTTGCTCGGCGGTTTGTGTTCA
CGCACGGGTCATTCGGGGGAAGGAAGAAAAACTACCGAGGCTAGGCGGCG
GGTTGCTATAACAGCATGAGACAGTTCATTTCATTTCCGAACGCATGGTG
CAGCACGTTTAAGTGTGGCGTCGGTGTTTCGTTGAAAGAGGTTGGACGCG
CACTCACAGTCGAAATTAGTCAAATACAAGGAGTTGGTGGCAGCAGTCTC
TTCGAGATGCAGGGCCGTGCTCCGTTGGACTAAAAAAAAAAAAAAAAACT
TTTAAGTAGGCGAGAAGTGGTCAGCTCTCGTTGGCGGGCTTGATCAGGTT
GTTTTCTAGGTGTGGAATGTGGTAGGTTTGGCTTGCTACATGGTGACAAG
ATGACCGTACGGGTGAAGTCGGTTGCGACCCCGGAAGGCGACAGAAAAGC
AATTTGTCTAAATTTGTCAGTACGCGGCTACAC back to top Coding sequence (CDS) from alignment at C-linearis_contig102:171596..175428+
>mRNA_C-linearis_contig102.771.1 ID=mRNA_C-linearis_contig102.771.1|Name=mRNA_C-linearis_contig102.771.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2670bp|location=Sequence derived from alignment at C-linearis_contig102:171596..175428+ (Chordaria linearis ClinC8C monoicous) back to top