Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 257 |
| Cds size | 255 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927367.219649-CDS-C-linearis_contig102:1352..1400 | 1622927367.219649-CDS-C-linearis_contig102:1352..1400 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig102 1353..1400 + |
| 1690879656.936333-CDS-C-linearis_contig102:1352..1400 | 1690879656.936333-CDS-C-linearis_contig102:1352..1400 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig102 1353..1400 + |
| 1622927367.2289839-CDS-C-linearis_contig102:1731..1938 | 1622927367.2289839-CDS-C-linearis_contig102:1731..1938 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig102 1732..1938 + |
| 1690879656.9458652-CDS-C-linearis_contig102:1731..1938 | 1690879656.9458652-CDS-C-linearis_contig102:1731..1938 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig102 1732..1938 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927367.2395322-UTR-C-linearis_contig102:1938..1939 | 1622927367.2395322-UTR-C-linearis_contig102:1938..1939 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig102 1939..1939 + |
| 1690879656.9552014-UTR-C-linearis_contig102:1938..1939 | 1690879656.9552014-UTR-C-linearis_contig102:1938..1939 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig102 1939..1939 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig102.765.1 >prot_C-linearis_contig102.765.1 ID=prot_C-linearis_contig102.765.1|Name=mRNA_C-linearis_contig102.765.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=85bp
HTHHQGQPDRPTLQGQPRRAHARLDQPISLQPSIDPASPSPLVATGQPTE
IHTEHRKSKTPGSRSSLGKPRAGTRRGGGRATNP* back to topmRNA from alignment at C-linearis_contig102:1353..1939+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig102.765.1 ID=mRNA_C-linearis_contig102.765.1|Name=mRNA_C-linearis_contig102.765.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=587bp|location=Sequence derived from alignment at C-linearis_contig102:1353..1939+ (Chordaria linearis ClinC8C monoicous)
CACACCCACCACCAGGGGCAGCCCGACAGGCCAACTTTACAGGGGCAGGT
GCGTAGAAAGTGGATGAATACGGGACGGTAATTTTGTTCGTTCGACGGGT
GCATATGGGCCAAGACGCTTTCGGCCAAGAGAAGGAGCGTGCCCGCCCAT
GGATACCATCGCAACTTACTATAGTCGCTTCGTTTCAAACGAACAGAGCG
AAGCAAGGCAGGTGCCAACACAATCATGATCACGGTATTCTCGGGAAGTG
CCATTATTAAACGATGCTTTTGCCAGTATGCCGGAAGGTATGTACAACAA
CGTGATATTGAGGCCAAACCCGCCCGTGCACGCCTTTACTTTTCGTTCGC
GTTCATTGTGTGTGCGCTCATTATCGCAGCCACGTCGTGCCCACGCTCGA
TTGGACCAACCCATTTCTCTGCAGCCATCCATAGACCCTGCCTCGCCGAG
CCCTTTAGTCGCAACGGGCCAGCCAACGGAGATCCACACGGAGCATCGGA
AATCCAAAACCCCAGGCAGCCGCAGTTCCTTGGGGAAGCCTAGGGCTGGT
ACGAGGAGGGGTGGAGGAAGGGCAACGAACCCGTAGA back to topCoding sequence (CDS) from alignment at C-linearis_contig102:1353..1939+ >mRNA_C-linearis_contig102.765.1 ID=mRNA_C-linearis_contig102.765.1|Name=mRNA_C-linearis_contig102.765.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=510bp|location=Sequence derived from alignment at C-linearis_contig102:1353..1939+ (Chordaria linearis ClinC8C monoicous)
CACACCCACCACCAGGGGCAGCCCGACAGGCCAACTTTACAGGGGCAGCA
CACCCACCACCAGGGGCAGCCCGACAGGCCAACTTTACAGGGGCAGCCAC
GTCGTGCCCACGCTCGATTGGACCAACCCATTTCTCTGCAGCCATCCATA
GACCCTGCCTCGCCGAGCCCTTTAGTCGCAACGGGCCAGCCAACGGAGAT
CCACACGGAGCATCGGAAATCCAAAACCCCAGGCAGCCGCAGTTCCTTGG
GGAAGCCTAGGGCTGGTACGAGGAGGGGTGGAGGAAGGGCAACGAACCCG
TAGCCACGTCGTGCCCACGCTCGATTGGACCAACCCATTTCTCTGCAGCC
ATCCATAGACCCTGCCTCGCCGAGCCCTTTAGTCGCAACGGGCCAGCCAA
CGGAGATCCACACGGAGCATCGGAAATCCAAAACCCCAGGCAGCCGCAGT
TCCTTGGGGAAGCCTAGGGCTGGTACGAGGAGGGGTGGAGGAAGGGCAAC
GAACCCGTAG back to top
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