Homology
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match:
D7FJK6_ECTSI (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK6_ECTSI)
HSP 1 Score: 280 bits (717), Expect = 6.810e-88
Identity = 133/171 (77.78%), Postives = 148/171 (86.55%), Query Frame = 1
Query: 1 DLPATQNTRVGGLGASNHEEMESDNMATPRAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAEDPTAPFC 513
D A +N+R+GGLG SN E +S N A F+LCS FV+ EGR +KP+FGFNGLGELVYQRTYARYLG+DT+++EQWYQTIERVVNGTFSMQKEWM SRGM W+E+E QSTAQEMYRRMFA KFLPPGRGLWAMGSKLTTERRLYAALNNCAFVST+DLA DPTAPFC
Sbjct: 12 DTAAARNSRIGGLGTSNDAEAKSSNTA------FQLCSQFVDREGRGSKPQFGFNGLGELVYQRTYARYLGEDTDDREQWYQTIERVVNGTFSMQKEWMLSRGMRWDEQEAQSTAQEMYRRMFAFKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTRDLASDPTAPFC 176
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match:
A0A835YMD1_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMD1_9STRA)
HSP 1 Score: 206 bits (523), Expect = 1.800e-59
Identity = 90/123 (73.17%), Postives = 110/123 (89.43%), Query Frame = 1
Query: 145 KPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAEDPTAPFC 513
+P FGFNGLGELVY+RTY+RY+ +D++ KE+WYQT++RVVNGTFSMQKEW + G+PW+E+ Q+ AQ+MY R+F MKFLPPGRGLWAMGSKLTTERRL+AALNNCAFVST ++AEDPT PFC
Sbjct: 35 RPPFGFNGLGELVYRRTYSRYVNEDSDVKEEWYQTVQRVVNGTFSMQKEWTLTGGLPWSEDAAQAEAQDMYTRIFNMKFLPPGRGLWAMGSKLTTERRLFAALNNCAFVSTANMAEDPTGPFC 157
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match:
A0A3L6V3B6_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V3B6_9STRA)
HSP 1 Score: 188 bits (477), Expect = 2.100e-55
Identity = 100/171 (58.48%), Postives = 118/171 (69.01%), Query Frame = 1
Query: 28 VGGLGASNHEEMESD------NMATP-RAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAE--DPTAPFC 513
V GL N +D N ATP R FRL + FV+S + P FGFNGLGELVY RTY+R D T KEQWY+T+ERVVNGT++MQK W+ RG+ WN E +A+EMYRR+FAMKFLPPGRGLWAMGS +T ER+LYAALNNCAFVST+D+ P PFC
Sbjct: 24 VDGLSEDNSHGFANDFIPLFRNEATPKREKKFRLSNKFVDSF-KDVPPPFGFNGLGELVYMRTYSRDKADGT--KEQWYETVERVVNGTYNMQKHWLEHRGLGWNGREAHRSAREMYRRIFAMKFLPPGRGLWAMGSPITEERKLYAALNNCAFVSTEDVDRRFSPAEPFC 191
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match:
A0A835ZHW0_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHW0_9STRA)
HSP 1 Score: 191 bits (486), Expect = 5.500e-54
Identity = 91/147 (61.90%), Postives = 110/147 (74.83%), Query Frame = 1
Query: 73 NMATPRAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAEDPTAPFC 513
N + + +AF L FV +A P FGFNGLGE VY+RTY+RYL + +E W+QT++RVVNGTFSMQKEW+ + W+E Q AQEMY R+F MKFLPPGRGLWAMG+ LTT+RRLYAALNNCAFVST D+ +DPTAPFC
Sbjct: 26 NSSGVKELAFALEPSFVAKWSKATPP-FGFNGLGEFVYRRTYSRYLHGGDDAREVWFQTVQRVVNGTFSMQKEWLITEHRCWDEAAAQRDAQEMYERIFNMKFLPPGRGLWAMGTALTTQRRLYAALNNCAFVSTADMQDDPTAPFC 171
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match:
A0A7R9UQG7_DIALT (Ribonucleoside-triphosphate reductase (thioredoxin) (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UQG7_DIALT)
HSP 1 Score: 176 bits (446), Expect = 2.210e-52
Identity = 86/142 (60.56%), Postives = 104/142 (73.24%), Query Frame = 1
Query: 85 PRAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAEDPTAPF 510
P + FRL FV+S + +P FGFNGLG+LVY+RTYAR D +EQW +T+ERVVNGTF+MQK W+ + WNE E Q AQ+MY R+F MKFLPPGRGLWAMGS +T ERRL+AALNNCAFVST++L D PF
Sbjct: 44 PGYVPFRLPDAFVDSYA-SREPAFGFNGLGKLVYERTYARPTAD--GGREQWLETVERVVNGTFNMQKRWIEESDLGWNEREAQEVAQDMYERIFTMKFLPPGRGLWAMGSPITEERRLFAALNNCAFVSTENLPTDFAGPF 182
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match:
W7T512_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T512_9STRA)
HSP 1 Score: 185 bits (470), Expect = 2.210e-51
Identity = 88/137 (64.23%), Postives = 106/137 (77.37%), Query Frame = 1
Query: 100 FRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAEDPTAPF 510
FRL FV + P FGFNGLGELVY+RTY+R D + +E+W++T+ RVVNGTFSMQKEW+ + + W+EE Q AQEMYRR+F MKFLPPGRGLWAMG+ LT +RRLYAALNNC FVSTQD+A DP+APF
Sbjct: 208 FRLDPSFVQ-QWEDEDPPFGFNGLGELVYRRTYSRMKADGEH-RERWFETVGRVVNGTFSMQKEWLLRQSLEWDEERAQGLAQEMYRRIFEMKFLPPGRGLWAMGTTLTEDRRLYAALNNCGFVSTQDMANDPSAPF 342
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match:
A0A662XT11_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XT11_9STRA)
HSP 1 Score: 180 bits (457), Expect = 4.950e-50
Identity = 90/145 (62.07%), Postives = 104/145 (71.72%), Query Frame = 1
Query: 85 PRAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAE--DPTAPFC 513
P FRL S FV + P FGFNGLGELVY RTY+R D T KE+W++T+ERVVNGTF+MQK+W+ G PWNE+E TA+EMY R+F MKF PPGRGLWAMGS +T ER LYAALNNCAFVST D+ E P PFC
Sbjct: 58 PGYKQFRLDSRFVAGFAQITPP-FGFNGLGELVYMRTYSRVKADGT--KERWFETVERVVNGTFNMQKKWLQQLGQPWNEQEMTHTAEEMYTRIFYMKFTPPGRGLWAMGSPITEERGLYAALNNCAFVSTADILELDTPAEPFC 199
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match:
A0A485L5Q2_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485L5Q2_9STRA)
HSP 1 Score: 180 bits (457), Expect = 6.510e-50
Identity = 90/144 (62.50%), Postives = 105/144 (72.92%), Query Frame = 1
Query: 88 RAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAE--DPTAPFC 513
R FRL FV S + P FGFNGLGELVY RTY+R D T KEQWY+T+ERVVNGT++MQK W+ RG+ WN E +A+EMYRR+F MKFLPPGRGLWAMGS +T ER+LYAALNNCAFVST+D+ P PFC
Sbjct: 91 REKKFRLSKKFVESF-KDVPPPFGFNGLGELVYMRTYSRDKADGT--KEQWYETVERVVNGTYNMQKHWLEHRGLGWNGHEAHRSAREMYRRIFDMKFLPPGRGLWAMGSPITEERKLYAALNNCAFVSTEDVDRRFSPAEPFC 231
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match:
F1A3P6_DICPU (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A3P6_DICPU)
HSP 1 Score: 180 bits (456), Expect = 7.730e-50
Identity = 83/137 (60.58%), Postives = 108/137 (78.83%), Query Frame = 1
Query: 100 FRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAEDPTAPF 510
F+L F+ E R K +FGF LGE+VY+RTY+R + DTN E+WY+T+ERVVNGT++MQK W+ S G+ WN+ + QS+AQEMYR++F MKFLPPGRGLWAMGS +T ++ LYAALNNCAFVST D+ ++PT PF
Sbjct: 66 FKLNDQFIE-EYRKKKAKFGFGILGEIVYRRTYSR-VKPDTNTNEKWYETVERVVNGTYNMQKRWIESHGLSWNDTKAQSSAQEMYRKIFEMKFLPPGRGLWAMGSPITEKKGLYAALNNCAFVSTMDMKDNPTKPF 200
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match:
A0A329SLK2_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SLK2_9STRA)
HSP 1 Score: 175 bits (443), Expect = 1.030e-49
Identity = 89/145 (61.38%), Postives = 101/145 (69.66%), Query Frame = 1
Query: 85 PRAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAE--DPTAPFC 513
P F L FV S P FGFNGLGELVY RTY+R D T KE+W++TIERV+NGTF+MQK+W G PWNEEE AQEMY R+F MKF PPGRGLWAMGS +T +R LYAALNNCAFVST D+ E P+ PFC
Sbjct: 52 PDYKPFTLDKAFVASFENQTPP-FGFNGLGELVYMRTYSRVKADGT--KERWFETIERVINGTFNMQKKWSQQLGQPWNEEEINHIAQEMYTRVFQMKFTPPGRGLWAMGSPITEDRGLYAALNNCAFVSTADILELKTPSEPFC 193
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 6.81e-88 / Id = 77.78 Expect = 1.80e-59 / Id = 73.17 Expect = 2.10e-55 / Id = 58.48 Expect = 5.50e-54 / Id = 61.90 Expect = 2.21e-52 / Id = 60.56 Expect = 2.21e-51 / Id = 64.23 Expect = 4.95e-50 / Id = 62.07 Expect = 6.51e-50 / Id = 62.50 Expect = 7.73e-50 / Id = 60.58 Expect = 1.03e-49 / Id = 61.38 Sequence D7FJK6_ECTSI A0A835YMD1_9STRA A0A3L6V3B6_9STRA A0A835ZHW0_9STRA A0A7R9UQG7_DIALT W7T512_9STRA A0A662XT11_9STRA A0A485L5Q2_9STRA F1A3P6_DICPU A0A329SLK2_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 280.8 Seed ortholog evalue 4.3e-73 Seed eggNOG ortholog 2880.D7FJK6 Hectar predicted targeting category other localisation GOs GO:0003674,GO:0003824,GO:0004748,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009141,GO:0009142,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 EggNOG free text desc. reductase EggNOG OGs 2QRRC@2759,COG1372@1 COG Functional cat. L Best tax level Eukaryota Best eggNOG OG NA|NA|NA Exons 4 Model size 515 Cds size 513 Stop 0 Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927367.065635-CDS-C-linearis_contig101:594768..594800 1622927367.065635-CDS-C-linearis_contig101:594768..594800 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 594769..594800 - 1690879656.819869-CDS-C-linearis_contig101:594768..594800 1690879656.819869-CDS-C-linearis_contig101:594768..594800 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 594769..594800 - 1622927367.0785177-CDS-C-linearis_contig101:595107..595258 1622927367.0785177-CDS-C-linearis_contig101:595107..595258 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 595108..595258 - 1690879656.832453-CDS-C-linearis_contig101:595107..595258 1690879656.832453-CDS-C-linearis_contig101:595107..595258 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 595108..595258 - 1622927367.0875745-CDS-C-linearis_contig101:595566..595657 1622927367.0875745-CDS-C-linearis_contig101:595566..595657 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 595567..595657 - 1690879656.84217-CDS-C-linearis_contig101:595566..595657 1690879656.84217-CDS-C-linearis_contig101:595566..595657 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 595567..595657 - 1622927367.0970535-CDS-C-linearis_contig101:596092..596331 1622927367.0970535-CDS-C-linearis_contig101:596092..596331 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 596093..596331 - 1690879656.8514385-CDS-C-linearis_contig101:596092..596331 1690879656.8514385-CDS-C-linearis_contig101:596092..596331 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 596093..596331 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.763.1
>prot_C-linearis_contig101.763.1 ID=prot_C-linearis_contig101.763.1|Name=mRNA_C-linearis_contig101.763.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=171bp
DLPATQNTRVGGLGASNHEEMESDNMATPRAMAFRLCSHFVNSEGRANKP back to top mRNA from alignment at C-linearis_contig101:594767..596331-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig101.763.1 ID=mRNA_C-linearis_contig101.763.1|Name=mRNA_C-linearis_contig101.763.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1565bp|location=Sequence derived from alignment at C-linearis_contig101:594767..596331- (Chordaria linearis ClinC8C monoicous)GACCTGCCAGCGACCCAAAATACGCGGGTGGGCGGACTAGGCGCATCGAA
TCATGAAGAAATGGAGTCCGACAACATGGCCACACCGCGAGCGATGGCTT
TTCGGCTGTGCTCGCATTTCGTCAACTCAGAAGGGCGTGCCAACAAACCT
CGATTCGGGTTCAACGGTCTAGGAGAGCTCGTTTACCAGCGTACGTACGC
ACGGTATCTGGGAGACGACACGAACGAAAAAGAGCAATG GTGCGGGTACC
CGAGGCGTCGCTTTACCCGAACGAAACCAGCCTAGTCAGATAGAGGAGGC
GTTGAGAACAGGTTTTGCACAATGTCTAGGTCATGCAGCGTCTATCCCGC
TATCCCGTTACCTACATGAATGGGACTGACTTGACGGTTTCGTGCCAAGC
CGGTCTTCTCCCCGTAAGACACATTCGCTCTCCCAATTCCAACCGCGTTG
GAAGGCGATACCCATCATCACTACATACGCATTCACCAAAGAAAACTGCG
CTGCCGACGCCATACGGGCCAAGGTCTGGAGTGGTCAATAGTCGTCTCAA
GAGCCTGATACGTTTTTGGTTGGACCGTGCCCCGTTGGACGGGGTGCCCT
GCTGATGATATTTTTTGATGTTTGGATCCAATAGTTGCCTAGCCCAACTC
AAGTGCTGCCAACATCGTGCGCAGGTACCAAACGATTGAGCGGGTGGTCA
ATGGAACCTTCAGCATGCAAAAAGAGTGGATGTTCTCTCGGGGCATGCCT
TGGAACGAGGAGGAG GTTGGTGCACCCTTGCCTGCCTGTAGCTTGTGGTG
CACGACTGCCGTGTGAAGATAGTAGCAACCGTCGGAGCATTTCGTCTCGA
TCGTTCAGGCTGTTGTCGACAATACTTGTGCGGACGTTGCAACCGTGTGG
TGTGCGGAACAGCAGTGGTACTTTTTTTGTGTTTTTCGGTGATGACACGC
AAGAGGTGCGGTTTCTAACATTTGAAATACCCAACAGCTTGAAGCGCCCA
AGTCGAATGCTTGGGCCGTCGAATCACCAACGCCGCATCCGATCATTTCG
CGATTATGCCTTGGACATCACAGACGCAGAGTACGGCGCAGGAAATGTAC
CGCCGGATGTTCGCCATGAAGTTTCTCCCTCCTGGCCGGGGACTGTGGGC
GATGGGCTCCAAGTTGACCACGGAAAGGCGGCTCTACGCGGCACTCAACA
ATTGCGCGTTCGTCAGTACCCAAG GTGGTGGCCGCTTTTCGCTCCCACGT
TTGCTGTTGAGAAACGAGATTCTGTGTAGAAGTCGGGGGAGGTGTTAATG
GGTAGTTTCCGCTTGACAAGGGCCCCGTCGCCCGTGTAAACTAAAACGAA
ACTGCCTGCGACGGCGAGCAAAACGAGAACCAAATGTGCGTGCGCTGTGA
CGCTCAATACTCTCAGTTGGGGTCGGGTAGTCGAAAATATTGGCTCCTCA
TGCAACAAAATGCAAGTGCATGTCTCAAACAATGCGATGAACGCTAGAAA
ACCTCCACTTGGCTGACCCCCTATCCCGCAGACCTTGCCGAGGACCCGAC
GGCTCCTTTCTGC back to top Coding sequence (CDS) from alignment at C-linearis_contig101:594767..596331-
>mRNA_C-linearis_contig101.763.1 ID=mRNA_C-linearis_contig101.763.1|Name=mRNA_C-linearis_contig101.763.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at C-linearis_contig101:594767..596331- (Chordaria linearis ClinC8C monoicous) back to top