Homology
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match:
D7FJK6_ECTSI (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK6_ECTSI)
HSP 1 Score: 755 bits (1949), Expect = 6.160e-265
Identity = 366/427 (85.71%), Postives = 401/427 (93.91%), Query Frame = 3
Query: 753 PVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRG---GVRVEEVPDKFCETDACVN 2024
P+ KPLSVTAIVD+MNKVGVCVVAGNVRRTAEIAFGDPGS+EYIDLKNYDKNP+R++FGWASNNSVLA LGMDYTKVCERI++NGEPGFAWLENMR Y RMG EKNDRD KA+GGNPCLEQTLESFEMCCLVETFPDKH+SLED+LTTLRFA +YAKTVTLG THW++TNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGY+AV+R+DEDLS FGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFY+RRV+++SDADVLGPLR+AGYRLEPAAENPE T+VVEVPVDAGEGVRTA+DLSMWEQLSFAAFLQRYWADNQ S CTITFDP EG +LAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISE++YK Q SKLR L+F+RR GQ+ RG GVRVEEVPD++CE+D+C +
Sbjct: 284 PLIGKPLSVTAIVDLMNKVGVCVVAGNVRRTAEIAFGDPGSDEYIDLKNYDKNPDRASFGWASNNSVLAPLGMDYTKVCERIQQNGEPGFAWLENMRTYGRMGDEKNDRDSKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLTTLRFAMLYAKTVTLGGTHWDKTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPEGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRYWADNQVS-CTITFDPETEGHHLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEDEYKSQISKLRHLNFSRRRGQT-RGEGDGVRVEEVPDRYCESDSCTD 708
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match:
A0A835YMD1_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMD1_9STRA)
HSP 1 Score: 603 bits (1555), Expect = 2.850e-205
Identity = 292/422 (69.19%), Postives = 343/422 (81.28%), Query Frame = 3
Query: 753 PVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRGGVRVEEVPDKFCETDAC 2018
P+ + L+VTAIVD+MNK+G CVVAGNVRRTAEIAFGDP S EYI+LK+YD NP+R+++GW SNNSV+A LGMDYT VC+R+ NGEPGFAWL+NMR YSRM + +D +A GGNPCLEQTLES+EMCCLVETFP++H+SLED+ TLR AF YAKTVTLG THW QTN I+ RNRRIGCSMSGLAQFVAARGLG L+ WCE GY AV D LS FG+ SIKTTSIKPSGTVSLLAGATPGMHYPE+RFYVRRV++++++++L PLR AG +EP A NP TVVVE+PVDAGEGVRT+R+L++WEQLSFAAFLQRYWADNQ S CT+TFDP E L HALDYFQYQLKGVSFLPR+ GA+PQMPYEAIS QY + + ++F G+ R +EVPDKFC+TDAC
Sbjct: 263 PLAGRDLTVTAIVDVMNKIGKCVVAGNVRRTAEIAFGDPDSAEYINLKDYDVNPHRASYGWTSNNSVMATLGMDYTDVCKRVAANGEPGFAWLDNMRAYSRMDDAPDHKDARARGGNPCLEQTLESYEMCCLVETFPNRHESLEDFEATLRCAFAYAKTVTLGVTHWPQTNVIMARNRRIGCSMSGLAQFVAARGLGALRAWCEHGYAAVQAADSALSTRFGVHRSIKTTSIKPSGTVSLLAGATPGMHYPEARFYVRRVRVAAESELLAPLRAAGLPVEPCAMNPG-TVVVEIPVDAGEGVRTSRELTLWEQLSFAAFLQRYWADNQVS-CTVTFDPETEAAQLPHALDYFQYQLKGVSFLPRIAAGAYPQMPYEAISAAQYAERMRSVSPVNFAALRGRRQRRAADADEVPDKFCDTDAC 682
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match:
W7T512_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T512_9STRA)
HSP 1 Score: 593 bits (1528), Expect = 4.660e-199
Identity = 285/431 (66.13%), Postives = 347/431 (80.51%), Query Frame = 3
Query: 738 QGHPGPVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSP---RGGVRVE----EVPDKFCET 2009
QG P+ +P+SVTAIVD+MN +G CVVAGNVRRTAEIAFG P EEY+DLKNY+KNP+R+A+GW SNNSV A +GMDY VCER++RNGEPGFAWLENMR Y RMG + RD +A+GGNPCLEQTLESFE+CCLVETFPDKH SLED+L TL+FAF+YAKTVTLG THW +TN ++ RNRRIGCSMSGLAQFV +G+G L WCEEGY+ + D+ S IP S+KTTSIKPSGTVSLLAGATPGMH+PESRFY+RRV+L+ ++++L PL + GY +EPAA +PE T VVE+PVD GEGVRT +++ +WEQ++FAAFLQR+WADNQ S CT+TFDP+ EG+ LA ALD FQYQLKG+SFLP+M+ GA+PQMPYE ISEE+Y+ +T +LR G+ P RGG VE E+ DKFCE+
Sbjct: 442 QGVLDPIVGEPVSVTAIVDMMNLIGKCVVAGNVRRTAEIAFGAPEDEEYVDLKNYEKNPHRAAYGWTSNNSVFASVGMDYENVCERVQRNGEPGFAWLENMRAYGRMGSPPDWRDARAMGGNPCLEQTLESFELCCLVETFPDKHDSLEDFLATLQFAFLYAKTVTLGPTHWAKTNAVMLRNRRIGCSMSGLAQFVTRKGMGELHRWCEEGYQTLQEADQRYSEWLSIPRSVKTTSIKPSGTVSLLAGATPGMHFPESRFYLRRVRLAKNSELLPPLLEVGYVVEPAAGDPERTCVVEIPVDVGEGVRTLKEVGLWEQVAFAAFLQRHWADNQVS-CTVTFDPATEGKDLARALDVFQYQLKGISFLPKMEAGAYPQMPYEEISEEEYRERTERLR--------GRRPDFWRGGAAVEDKKEELLDKFCES 863
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match:
A0A6H5KM58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM58_9PHAE)
HSP 1 Score: 584 bits (1505), Expect = 5.170e-199
Identity = 312/497 (62.78%), Postives = 346/497 (69.62%), Query Frame = 3
Query: 753 PVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKV------------------------------------CERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASI----------------------------------CTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRG---GVRVEEVPDKFCETDACVN 2024
P+ KPLSVTAIVD+MNKVGVCVVAGNVRRTAEIAFGDPGS+EYIDLKNYDKNP+R++FGWASNNSVLA LGMDYTKV CERI++NGEPGFAWLENMR Y RMG EKNDRD KA+GGNPCLEQTLESFEMCCLVETFPDKH+SLED+LTTLRFA +YAKTVTLG THW++TNEILFRNRRIGC + G + RG D+S GMHYPESRFY+RRV+++SDADVLGPLR+AGYRLEPAAENPE T+VVEVPVDAGE VRTA+DLSMWEQLSFAAFLQRYWADNQAS CTITFDP EG++LAHALDYFQYQLKGVSFLPR DYGAFPQMPYEAISE++YK Q SKLR LDF+RR GQ+ RG G RVEEVPD++CE+D+C N
Sbjct: 177 PLIGKPLSVTAIVDLMNKVGVCVVAGNVRRTAEIAFGDPGSDEYIDLKNYDKNPDRASFGWASNNSVLAPLGMDYTKVHNGTQLSRLFYSSFSISNGCNRGVARVLMDVSNAKVCERIQKNGEPGFAWLENMRAYGRMGDEKNDRDSKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLTTLRFAMLYAKTVTLGGTHWDKTNEILFRNRRIGCRLRGSP--LDHRG--------------------DMSR--------------------------TGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPEGTMVVEVPVDAGEAVRTAQDLSMWEQLSFAAFLQRYWADNQASFLCFGALTLRTWIFTSHASTLCIQRYTPFVFVQVSCTITFDPDTEGKHLAHALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQT-RGEGDGARVEEVPDRYCESDSCTN 624
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match:
A0A835ZHW0_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHW0_9STRA)
HSP 1 Score: 577 bits (1488), Expect = 1.260e-194
Identity = 282/425 (66.35%), Postives = 336/425 (79.06%), Query Frame = 3
Query: 753 PVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFT----RRDGQSPRGGVRVEEVPDKFCETDA 2015
P+ + L+VTAIVDIMNK+G CV+AGNVRRTAEIAFGDP EEY++LK+YD NP+R++FGW SNNSV+ LGMDYT VC+R+ NGEPGFAWL+NMR + RMG+ +D+D A GGNPCLEQTLES+EMCCLVETFP +H +LED+ TLR AF YAKTVTLGA HW +T L RNRRIGCSMSGLAQF AARGL TL+ WC+ GY + D LS+ G+P SIKTTSIKPSGTVSLLAGATPGMHYPE+RFYVRRV++++D +L LR AG R+EP A +P T VVE VDAGEGVRTAR+L +WEQLSFAAFLQR+WADNQ S CT+TFDP E L HALDYFQYQLKGVSFLPR+ GA+PQMPYEAI+ +QY + S + ++F R G+ RG V+EVPDKFC++D+
Sbjct: 279 PLVGRSLTVTAIVDIMNKIGKCVIAGNVRRTAEIAFGDPDDEEYVNLKDYDANPHRASFGWTSNNSVMCPLGMDYTAVCKRVAANGEPGFAWLDNMRRFGRMGNPADDKDAAASGGNPCLEQTLESYEMCCLVETFPHRHDTLEDFEATLRCAFAYAKTVTLGAPHWPRTAAALLRNRRIGCSMSGLAQFAAARGLPTLRAWCDRGYATIQTTDAALSSRLGVPRSIKTTSIKPSGTVSLLAGATPGMHYPEARFYVRRVRVAADCALLPALRAAGLRVEPCALSPATTAVVEFAVDAGEGVRTARELPLWEQLSFAAFLQRHWADNQVS-CTVTFDPETEAAQLPHALDYFQYQLKGVSFLPRIAAGAYPQMPYEAITAQQYAERMSAVTPVNFNFNCAARAGR--RGADDVDEVPDKFCDSDS 700
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match:
A0A8J5M3B0_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M3B0_9STRA)
HSP 1 Score: 562 bits (1448), Expect = 1.940e-189
Identity = 274/423 (64.78%), Postives = 323/423 (76.36%), Query Frame = 3
Query: 753 PVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRGGVRVEEVPDKFCETDACV 2021
P+ KPL+ IVDIMN++GVCVV+GNVRRTAEIAFGD EEYIDLKNY+KNP+R+AFGW SNNS+ A +GMDY + ERI RNGEPGFAWLENMR + RM K+D D+ A GGNPCLEQTLES+EMCCLVETFP H SLED+L TL+FA+MYAKTVTLG T W +TNE++ RNRRIGCSMSG+AQF++ RGL Q WCE GY V VD+ LSA F IP SIKTTSIKPSGTVSLLAGATPGMHYPESRFY+RR++L + +D+L L+ A Y +EPA E+P T+VV +PVD GEGVRT D+S WEQ + AAFLQR+WADNQ S CT+TFDP EG LAH LDYFQYQLKG+S LP+++ GA+ QMPYE IS Y + L F + V +VPDK+CE ACV
Sbjct: 279 PLAGKPLTARGIVDIMNQMGVCVVSGNVRRTAEIAFGDYNDEEYIDLKNYEKNPDRAAFGWTSNNSIFADIGMDYKPIAERIVRNGEPGFAWLENMRNFGRMNGIKDDCDRNASGGNPCLEQTLESYEMCCLVETFPYNHDSLEDFLETLKFAYMYAKTVTLGQTRWPRTNEVMRRNRRIGCSMSGIAQFISNRGLNDFQRWCEAGYDRVQEVDKQLSARFAIPRSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRMRLDNHSDLLPALQRAEYAIEPAHESPNTTLVVSIPVDVGEGVRTLSDVSAWEQFALAAFLQRHWADNQVS-CTVTFDPKTEGPQLAHMLDYFQYQLKGISLLPKLELGAYKQMPYEEISARTYHKMNQSIEPLQFN-----VIQSIETVIDVPDKYCE--ACV 693
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match:
A0A661VGD2_9CHLR (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A661VGD2_9CHLR)
HSP 1 Score: 561 bits (1446), Expect = 2.890e-189
Identity = 259/417 (62.11%), Postives = 332/417 (79.62%), Query Frame = 3
Query: 768 PLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRGGVRVEEVPDKFCETDAC 2018
P+S+T+IVDIMN +G CVVAGNVRRTAEI FG+P ++EY+DLKNY+ NP+R+ +GW SNNS+ A+LGM+Y ER+R NGEPG+AWLENMR Y RM N +D +A+GGNPCLEQTLES+E+CCLVETFP+ H SL+DYLTTL++A++YAKTVTLG THW +TN ++ RNRRIGCSMSG+AQF+A RG+G L++W +EGY+ + +D++ S IP SIKTTSIKPSGTVSLLAGATPG+H+PESR+Y+RR++L D++++ PL AGY++EPA + + T+VVE+PVD G GVRT +SMWEQLS AA QRYWADNQ S CT+TFDP +EG +A ALD +QYQLKG+SFLPR+DYGA+PQMPYEAI +E Y + S L KL F R G+ E V ++FC++D C
Sbjct: 254 PISITSIVDIMNLIGKCVVAGNVRRTAEIVFGEPDNDEYLDLKNYEVNPHRAEYGWTSNNSIFAELGMNYEPSAERVRYNGEPGYAWLENMREYGRMADAPNFKDHRAMGGNPCLEQTLESYELCCLVETFPNNHDSLDDYLTTLKYAYLYAKTVTLGKTHWPETNRVMLRNRRIGCSMSGIAQFIANRGIGKLRQWMDEGYEHIQDLDKEYSDWMAIPRSIKTTSIKPSGTVSLLAGATPGIHFPESRYYIRRMRLGKDSNLVAPLEKAGYKIEPAFGSEDTTLVVEIPVDVGAGVRTVDKVSMWEQLSIAALAQRYWADNQVS-CTVTFDPEEEGPQIAAALDIYQYQLKGISFLPRLDYGAYPQMPYEAIDKESYDNMKSALGKLSFGRIKGE--------EVVVERFCDSDVC 661
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match:
A0A2E6KDL5_9EURY (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6KDL5_9EURY)
HSP 1 Score: 556 bits (1432), Expect = 1.270e-187
Identity = 258/418 (61.72%), Postives = 330/418 (78.95%), Query Frame = 3
Query: 768 PLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRGGVRVEEVPDKFCETDACV 2021
P+++T IVDIMN +G CVVAGNVRRTAEI FGDP SEEY+DLKNY+ NP+R +GW SNNS+ A+LGMDY++ C+RI NGEPGFAWLENM+ YSRM + K+++D +A+GGNPCLEQTLES+E+CCLVETFP KH+SLEDYL TL++A++YAKTVTLG THW +TN ++ RNRRIGCS+SG+AQF+ RG+G L+EW E GY + R+D+ S IP SIKTTS+KPSGTVSLLAG+TPG+HYPESRFY+RR++LS ++++L PL AGY++EPA + + TV +EVP+D G+G+RTA L++WEQ S AAF+QR+WADNQ S CT+TFDP KE + L L+YFQYQLKG+S LPR D GA+ QMPYEAI E+ Y T KL+ L FT+ G+ +KFC+ D C+
Sbjct: 247 PITITTIVDIMNLIGKCVVAGNVRRTAEIVFGDPYSEEYMDLKNYEVNPHRDQYGWTSNNSIFAELGMDYSEACKRIVGNGEPGFAWLENMQGYSRMKNGKDNKDHRAMGGNPCLEQTLESYELCCLVETFPYKHESLEDYLKTLKYAYLYAKTVTLGKTHWPETNRVMLRNRRIGCSVSGVAQFLTYRGVGELREWLETGYDEIQRLDDVYSDFLAIPKSIKTTSVKPSGTVSLLAGSTPGVHYPESRFYIRRMRLSVNSELLQPLEAAGYKVEPAFGSEDSTVCIEVPIDVGDGIRTADQLTVWEQFSLAAFMQRHWADNQVS-CTVTFDPDKEAEQLEQCLNYFQYQLKGISCLPRFDAGAYKQMPYEAIDEKSYNKMTKKLKPLSFTKMKGEDAEA--------EKFCDGDVCL 655
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match:
H3GD43_PHYRM (Ribonucleoside-triphosphate reductase (thioredoxin) n=4 Tax=Phytophthora TaxID=4783 RepID=H3GD43_PHYRM)
HSP 1 Score: 552 bits (1423), Expect = 1.100e-186
Identity = 266/421 (63.18%), Postives = 318/421 (75.53%), Query Frame = 3
Query: 753 PVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRGGVRVEEVPDKFCETDA 2015
P+ KPL+ IVDIMN++GVCVV+GNVRRTAEIAFGD EEY+DLKNY+KNP R+AFGW SNNS+ A +GMDY + ERI NGEPGFAWLENMR Y RM K+ RD+ A GGNPCLEQTLES+EMCCLVETFP H SLED+L TL+FA+MYAKTVTLG T W +TN ++ RNRRIGCSMSG+AQF++ RGL Q WCE GY + +VD+ +SA F IP SIKTTSIKPSGTVSLLAGATPGMHYPESRFY+RR++L +D+L L+ AGY +E A E P+ T+VV +PVD G+GVRT D+S WEQ + +AFLQRYWADNQ S CT+TFDP EG LAH LDYFQYQLKG+S LP+++ GA+ QMPYE I+ Y + L F + V +VPDK+CE A
Sbjct: 211 PLAGKPLTARGIVDIMNQMGVCVVSGNVRRTAEIAFGDYNDEEYVDLKNYEKNPERAAFGWTSNNSIFADIGMDYKPIAERIVLNGEPGFAWLENMRNYGRMNGIKDGRDRNASGGNPCLEQTLESYEMCCLVETFPFNHDSLEDFLETLKFAYMYAKTVTLGQTQWPRTNNVMQRNRRIGCSMSGIAQFISNRGLNEFQRWCEAGYDRIQQVDKLISARFAIPRSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRMRLDKHSDLLPALQRAGYDIESANEAPDSTLVVSIPVDVGKGVRTLSDVSAWEQFALSAFLQRYWADNQVS-CTVTFDPKTEGLQLAHMLDYFQYQLKGISLLPKLELGAYKQMPYEEINARTYHKMNQSIEPLQF------NVIQSTEVLDVPDKYCEACA 624
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match:
K3X6L5_GLOUD (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6L5_GLOUD)
HSP 1 Score: 553 bits (1425), Expect = 3.250e-186
Identity = 258/414 (62.32%), Postives = 322/414 (77.78%), Query Frame = 3
Query: 765 KPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRGGVRVEEVPDKFCE 2006
KPLS IVD+MN +GVCVV+GNVRRTAEIAFGD EY++LK+Y+KNP+R+A+GW SNNS+ A LGMDY + +RI +NGEPGFAWLENMR + RM ++ RD+ A GGNPCLEQTLES+EMCCLVETFP H S+EDYL TLRFA++YAKTVTLG THW +TN ++ RNRRIGCSMSG+AQF++ GL LQ+WC+ GY A+ DE S F IP SIKTTS+KPSGTVSLLAGATPGMHYPESRFY+RR++L +D++ L+ Y +EPA E P+ T+VV +PVD G GVRT ++S WEQ++ A+FLQRYWADNQ S CT+TFDP EG +LAHAL+YFQYQLKG+S LP+++ GA+ QMPYEAI E Y+ ++L+ L F +S + + +VPDKFCE
Sbjct: 266 KPLSARHIVDLMNHIGVCVVSGNVRRTAEIAFGDYKDPEYVELKDYEKNPDRAAYGWTSNNSIFADLGMDYAPITDRIIKNGEPGFAWLENMRKFGRMNGHEDHRDRNAAGGNPCLEQTLESYEMCCLVETFPAAHTSVEDYLETLRFAYLYAKTVTLGPTHWPRTNRVMLRNRRIGCSMSGVAQFISQHGLHELQQWCDRGYYAIQEYDEQFSNQFAIPRSIKTTSVKPSGTVSLLAGATPGMHYPESRFYIRRMRLDKQSDLVPALQKGEYDMEPAVEAPDSTLVVSIPVDVGHGVRTLNEVSAWEQMALASFLQRYWADNQVS-CTVTFDPKTEGPHLAHALNYFQYQLKGISLLPKLELGAYKQMPYEAIDEATYREMHARLKPLVF-----ESVKTKETIIQVPDKFCE 673
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 6.16e-265 / Id = 85.71 Expect = 2.85e-205 / Id = 69.19 Expect = 4.66e-199 / Id = 66.13 Expect = 5.17e-199 / Id = 62.78 Expect = 1.26e-194 / Id = 66.35 Expect = 1.94e-189 / Id = 64.78 Expect = 2.89e-189 / Id = 62.11 Expect = 1.27e-187 / Id = 61.72 Expect = 1.10e-186 / Id = 63.18 Expect = 3.25e-186 / Id = 62.32 Sequence D7FJK6_ECTSI A0A835YMD1_9STRA W7T512_9STRA A0A6H5KM58_9PHAE A0A835ZHW0_9STRA A0A8J5M3B0_9STRA A0A661VGD2_9CHLR A0A2E6KDL5_9EURY H3GD43_PHYRM K3X6L5_GLOUD Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 738.4 Seed ortholog evalue 1.8e-210 Seed eggNOG ortholog 2880.D7FJK6 Hectar predicted targeting category other localisation GOs GO:0003674,GO:0003824,GO:0004748,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009141,GO:0009142,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 EggNOG free text desc. reductase EggNOG OGs 2QRRC@2759,COG1372@1 Ec32 ortholog description conserved unknown protein Ec32 ortholog Ec-04_006460.1 COG Functional cat. L Best tax level Eukaryota Best eggNOG OG NA|NA|NA Exons 15 Model size 2077 Cds size 1251 Stop 1 Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927366.8582265-UTR-C-linearis_contig101:589621..589650 1622927366.8582265-UTR-C-linearis_contig101:589621..589650 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 589622..589650 - 1690879656.6481802-UTR-C-linearis_contig101:589621..589650 1690879656.6481802-UTR-C-linearis_contig101:589621..589650 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 589622..589650 - 1622927366.968784-UTR-C-linearis_contig101:593855..593993 1622927366.968784-UTR-C-linearis_contig101:593855..593993 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 593856..593993 - 1690879656.7625976-UTR-C-linearis_contig101:593855..593993 1690879656.7625976-UTR-C-linearis_contig101:593855..593993 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 593856..593993 - 1622927366.9788-UTR-C-linearis_contig101:594349..594474 1622927366.9788-UTR-C-linearis_contig101:594349..594474 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 594350..594474 - 1690879656.7715263-UTR-C-linearis_contig101:594349..594474 1690879656.7715263-UTR-C-linearis_contig101:594349..594474 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 594350..594474 - 1622927366.993618-UTR-C-linearis_contig101:594666..594716 1622927366.993618-UTR-C-linearis_contig101:594666..594716 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 594667..594716 - 1690879656.781904-UTR-C-linearis_contig101:594666..594716 1690879656.781904-UTR-C-linearis_contig101:594666..594716 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 594667..594716 - 1622927367.0039272-UTR-C-linearis_contig101:595104..595258 1622927367.0039272-UTR-C-linearis_contig101:595104..595258 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 595105..595258 - 1690879656.791926-UTR-C-linearis_contig101:595104..595258 1690879656.791926-UTR-C-linearis_contig101:595104..595258 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 595105..595258 - 1622927367.0176532-UTR-C-linearis_contig101:595566..595657 1622927367.0176532-UTR-C-linearis_contig101:595566..595657 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 595567..595657 - 1690879656.8002157-UTR-C-linearis_contig101:595566..595657 1690879656.8002157-UTR-C-linearis_contig101:595566..595657 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 595567..595657 - 1622927367.032659-UTR-C-linearis_contig101:596092..596331 1622927367.032659-UTR-C-linearis_contig101:596092..596331 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 596093..596331 - 1690879656.8097253-UTR-C-linearis_contig101:596092..596331 1690879656.8097253-UTR-C-linearis_contig101:596092..596331 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 596093..596331 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927366.867538-CDS-C-linearis_contig101:589650..589830 1622927366.867538-CDS-C-linearis_contig101:589650..589830 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 589651..589830 - 1690879656.6602087-CDS-C-linearis_contig101:589650..589830 1690879656.6602087-CDS-C-linearis_contig101:589650..589830 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 589651..589830 - 1622927366.8761914-CDS-C-linearis_contig101:590449..590573 1622927366.8761914-CDS-C-linearis_contig101:590449..590573 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 590450..590573 - 1690879656.6697524-CDS-C-linearis_contig101:590449..590573 1690879656.6697524-CDS-C-linearis_contig101:590449..590573 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 590450..590573 - 1622927366.8866396-CDS-C-linearis_contig101:590853..591012 1622927366.8866396-CDS-C-linearis_contig101:590853..591012 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 590854..591012 - 1690879656.6815085-CDS-C-linearis_contig101:590853..591012 1690879656.6815085-CDS-C-linearis_contig101:590853..591012 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 590854..591012 - 1622927366.8955874-CDS-C-linearis_contig101:591173..591267 1622927366.8955874-CDS-C-linearis_contig101:591173..591267 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 591174..591267 - 1690879656.69059-CDS-C-linearis_contig101:591173..591267 1690879656.69059-CDS-C-linearis_contig101:591173..591267 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 591174..591267 - 1622927366.903847-CDS-C-linearis_contig101:591571..591655 1622927366.903847-CDS-C-linearis_contig101:591571..591655 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 591572..591655 - 1690879656.7018523-CDS-C-linearis_contig101:591571..591655 1690879656.7018523-CDS-C-linearis_contig101:591571..591655 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 591572..591655 - 1622927366.9121897-CDS-C-linearis_contig101:592149..592256 1622927366.9121897-CDS-C-linearis_contig101:592149..592256 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 592150..592256 - 1690879656.7124236-CDS-C-linearis_contig101:592149..592256 1690879656.7124236-CDS-C-linearis_contig101:592149..592256 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 592150..592256 - 1622927366.9210536-CDS-C-linearis_contig101:592443..592539 1622927366.9210536-CDS-C-linearis_contig101:592443..592539 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 592444..592539 - 1690879656.7258022-CDS-C-linearis_contig101:592443..592539 1690879656.7258022-CDS-C-linearis_contig101:592443..592539 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 592444..592539 - 1622927366.9343364-CDS-C-linearis_contig101:592807..593028 1622927366.9343364-CDS-C-linearis_contig101:592807..593028 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 592808..593028 - 1690879656.7349608-CDS-C-linearis_contig101:592807..593028 1690879656.7349608-CDS-C-linearis_contig101:592807..593028 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 592808..593028 - 1622927366.9448817-CDS-C-linearis_contig101:593227..593404 1622927366.9448817-CDS-C-linearis_contig101:593227..593404 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 593228..593404 - 1690879656.746468-CDS-C-linearis_contig101:593227..593404 1690879656.746468-CDS-C-linearis_contig101:593227..593404 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 593228..593404 - 1622927366.9555523-CDS-C-linearis_contig101:593846..593855 1622927366.9555523-CDS-C-linearis_contig101:593846..593855 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 593847..593855 - 1690879656.7540267-CDS-C-linearis_contig101:593846..593855 1690879656.7540267-CDS-C-linearis_contig101:593846..593855 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 593847..593855 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.762.1
>prot_C-linearis_contig101.762.1 ID=prot_C-linearis_contig101.762.1|Name=mRNA_C-linearis_contig101.762.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=417bp
MNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNN back to top mRNA from alignment at C-linearis_contig101:589622..596331-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig101.762.1 ID=mRNA_C-linearis_contig101.762.1|Name=mRNA_C-linearis_contig101.762.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6710bp|location=Sequence derived from alignment at C-linearis_contig101:589622..596331- (Chordaria linearis ClinC8C monoicous)GACCTGCCAGCGACCCAAAATACGCGGGTGGGCGGACTAGGCGCATCGAA
TCATGAAGAAATGGAGTCCGACAACATGGCCACACCGCGAGCGATGGCTT
TTCGGCTGTGCTCGCATTTCGTCAACTCAGAAGGGCGTGCCAACAAACCT
CGATTCGGGTTCAACGGTCTAGGAGAGCTCGTTTACCAGCGTACGTACGC
ACGGTATCTGGGAGACGACACGAACGAAAAAGAGCAATG GTGCGGGTACC
CGAGGCGTCGCTTTACCCGAACGAAACCAGCCTAGTCAGATAGAGGAGGC
GTTGAGAACAGGTTTTGCACAATGTCTAGGTCATGCAGCGTCTATCCCGC
TATCCCGTTACCTACATGAATGGGACTGACTTGACGGTTTCGTGCCAAGC
CGGTCTTCTCCCCGTAAGACACATTCGCTCTCCCAATTCCAACCGCGTTG
GAAGGCGATACCCATCATCACTACATACGCATTCACCAAAGAAAACTGCG
CTGCCGACGCCATACGGGCCAAGGTCTGGAGTGGTCAATAGTCGTCTCAA
GAGCCTGATACGTTTTTGGTTGGACCGTGCCCCGTTGGACGGGGTGCCCT
GCTGATGATATTTTTTGATGTTTGGATCCAATAGTTGCCTAGCCCAACTC
AAGTGCTGCCAACATCGTGCGCAGGTACCAAACGATTGAGCGGGTGGTCA
ATGGAACCTTCAGCATGCAAAAAGAGTGGATGTTCTCTCGGGGCATGCCT
TGGAACGAGGAGGAG GTTGGTGCACCCTTGCCTGCCTGTAGCTTGTGGTG
CACGACTGCCGTGTGAAGATAGTAGCAACCGTCGGAGCATTTCGTCTCGA
TCGTTCAGGCTGTTGTCGACAATACTTGTGCGGACGTTGCAACCGTGTGG
TGTGCGGAACAGCAGTGGTACTTTTTTTGTGTTTTTCGGTGATGACACGC
AAGAGGTGCGGTTTCTAACATTTGAAATACCCAACAGCTTGAAGCGCCCA
AGTCGAATGCTTGGGCCGTCGAATCACCAACGCCGCATCCGATCATTTCG
CGATTATGCCTTGGACATCACAGACGCAGAGTACGGCGCAGGAAATGTAC
CGCCGGATGTTCGCCATGAAGTTTCTCCCTCCTGGCCGGGGACTGTGGGC
GATGGGCTCCAAGTTGACCACGGAAAGGCGGCTCTACGCGGCACTCAACA
ATTGCGCGTTCGTCAGTACCCAAGGTG GTGGCCGCTTTTCGCTCCCACGT
TTGCTGTTGAGAAACGAGATTCTGTGTAGAAGTCGGGGGAGGTGTTAATG
GGTAGTTTCCGCTTGACAAGGGCCCCGTCGCCCGTGTAAACTAAAACGAA
ACTGCCTGCGACGGCGAGCAAAACGAGAACCAAATGTGCGTGCGCTGTGA
CGCTCAATACTCTCAGTTGGGGTCGGGTAGTCGAAAATATTGGCTCCTCA
TGCAACAAAATGCAAGTGCATGTCTCAAACAATGCGATGAACGCTAGAAA
ACCTCCACTTGGCTGACCCCCTATCCCGCAGACCTTGCCGAGGACCCGAC
GGCTCCTTTCTGCTTTCTAATGGACGCGTCTATGCTCGGAGTAGGGGTCG
GGTTCGACACGAAAGGGGCAGGCACGATCTACATCATGGCGCCCGGCAGT
GCGGAAGGTCTAGAG GTGGGGGGCGTAGAGGTGTATCTTGCACAAACAAA
AGGGGTAGAAGAATAGTGATACAATTTCAATTCGAGGCTATCTTTGTCTT
TGTCGTACATGCTAGTCGTACTTGTTTAGTTTTGTGCTATCTTCGAAGGA
AATTACCACAACCGATTTGGAACGCTTCCCTTCATTGCGGTTTTGTTTGC
TGTTCAGGGGCCGAGCATTGCGAATATTGTGGTGGATGACTCTCGGGAGG
GATGGCGAGAAGCATTGAAGGTCCTCCTCGAGGCCTACTTCTTCGGCCAT
GCATCACCCGAGTTTGATGTGTCTCAGTTGAG GTGATAAAGGTGGCAGTG
GTTTCCCTCGCCATCCACACAACCACCGCGCTGTCTGAGCAAATTGCAGA
CTATCTTAACGCTTGCGGTATACCCCGCGTTTGTCACATCAATGTTATCT
AGCATCATTAGAACGACGTTGACACTTTGCCCACCCCGGCTCAGTCGCCT
TTTTTGTTATCTCGGCGCGGTTTAGCTTTCGAACCAGCAGAGCCGTTGCA
AAGGTTTCCTTGGTTAGATCGACCCAAGTGCTACCTCAACTTGTGCAACA
CATACCAATGGACCCACCGGCTAGGGTGTGAACACTGCTTTCCTGGGAGC
GCTGAAAACCGCATGCTGCGTATCTGTTATTGTGGCAGAGCTGCCGGAGC
ACCAATCCGTGGATTCGGAGGAGTCAGCCAGGGCAGCGCCCCGCTGATCG
AGCTGATTGCAAGTGTCAAGGCCACCCTGGACCCGTTGATTGGAAACCTC
TGTCGGTTACTGCCATCGTGGACATC ATGAACAAG GTCTGCCAGCAAAGT
CCGAGAATTTGAATTCGTAGAGACGTCTTGCATATTTCCTGGCGGTCTGA
GGCTGGATTGGTACGCGAATTCGTGGGATGTTGTCGTACGATAGGTATCT
CAAGAGATGGCGAGGGGTGGTGCTGATATAGTCGTACGAGCGTTCATTCT
TCCACAATACCAGCAAGGTGTACATACAGCAGTAGTTTCTCGCAGATTGC
AGGTTCGGTCCTGCTAGAACAGTCGCCCAATGGTTGTTGTTTCTCACATG
GCTCTCCAGTTCAAAACATCCATGGGGGCTCGTGGTCACAAAATAGGGCA
CACTCGATGCCGCTGAAGAAGAATTTAGACAAGTCGCCCAGTGGTCTACA
CCGATATTGCAGCCCACAGAGTGATACACCTTTCGAGAGACTGCGCGTAT
TTCGTTTGAACCGGCATTGTATGTTAGGTGGGAGTATGTGTGGTGGCTGG
AAACGTCCGACGAACGGCCGAGATTGCGTTCGGCGACCCAGGGAGCGAAG
AGTACATCGACCTCAAGAATTACGACAAGAACCCCAACAGGAGCGCTTTC
GGGTGGGCAAGCAATAACTCTGTGCTAGCAAAGCTAGGCATGGACTACAC
CAAG GTACGATTATGGGCGGAACGAAGTATCTAGGCGAGATGTATCTAGT
AGTATCGTGTAGGGGGACAATAGATTTGCCACGCGCAGGCTTCACAAACA
TGGATAAACCTCATTCCCCTCTATCCCCATGTTTGTTGCCTTGCCAGCGC
TAGCGTGCATCCTCTTTGCTACTCTTGGCTGACACATTCCACGCGCTACA
CAGGTGTGTGAGCGCATACGGCGAAACGGGGAACCAGGATTCGCGTGGCT
GGAAAACATGCGAATGTATAGTCGCATGGGGCACGAGAAGAATGATCGCG
ATAAGAAGGCGTTGGGTGGAAACCCTTGTCTGGAGCAGACGCTGGAAAGT
TTTGAGATGTGCTGCCTCGTGGAAACGTTTCCGGACAAGCACAAGTCCCT
CGAGGACTATCTCACGACTCTCAG GTCAGATAAGATTTATTCCGGCTATT
TCATGACAACCGTTGCAATCAAATGTTGCATTTCTGTTGAAAAGGCTCCA
TTCGATCGAATGCTGACATGAAGCGTCCCTCTCCATTATGTTCGACTTCG
TTGGACAAAGTCTGAAGGGGGCGCTGTTGTGTAGCGCCGGGTGGTCAAGC
TGTCTTTCCTAGTATTCGTGCTTGAGATCCACGGCTTGACCTTGCAGAAG
ACTGGCGATAGGCGAACCACCTCTCTGTGCGTGCTTGTCTAGGTTCGCCT
TCATGTACGCGAAAACCGTGACACTGGGGGCCACTCACTGGGAGCAAACG
AACGAGATTTTGTTCCGGAATCGTCGAATTGGGTGCAG GTACGCCTTCGT
CAACCCCTGACCGCACACATGCGTTCGCTGTTCGTTCCTCGACCGTACGT
CGGTCCTTTGCAGGTTGTTATTTGTCCGGGATCGTGTATTTTCCCGTGAA
CATTGGTCGCTGCTTCCTTGCGTAGCTGATCTTGCGGCTGCTCTGCACAC
CCCTTATTCGAACCCACTTTGGCAGCATGAGCGGGCTGGCTCAATTTGTT
GCGGCGAGGGGTCTAGGAACTTTACAAGAGTGGTGCGAAGAGGGCTACAA
GGCTGTCGCTCGAGTAGACGAGGATCTTTCAG GCGAGATTCGTCGGGTGG
TGCATCGCTTTGTGAAGTAAAGAAACGCATTTTCTCATAGTCGTACTTTC
CCAGATCCGTTAGTTTTTTAGACTACGGTGTGGCAAGTCCTTTGACTCTT
GCTGGAAGTGGCAACTTCCGTAGAGGTGCAAAGGTGTTTTGAGCGTGCCG
CACAGGTTTTTCCGTTTATGTGGTGGCCGGTCATGGCACCACCAGCGAGA
AGCACATCAAGGTCGGAGAGGCAGCGTGTTTGGTTGCGGGAAATTTTGAG
CGATCACCCGAAACCTTGGTCGCTTTGATTTCGATCGATTGTTATGGTGA
AACTGGAAGTTGGCGTGCCTGTATAATTTGTCAGGTGACCTGTCCGTCTG
GCTCTAAGGAGCGCCAACGTCGTGAAAGATTGTTAATAGTGATATAGAGC
TTGAAGCCTGGTACGTGACACCAAGGAAAGCACTCACATTGTCGCAACCT
CGTCCTTTTGGGTGCGTACCTCACAGCCCATTTTGGCATCCCAACATCCA
TCAAGACCACCTCTATTAAACCAAGCGGAACGGTGTCTCTTCTTGCTGGG
GCAACCCCAG GTACGCAACGACTAGGGCAGACGCATGATTTCAGCAGCAG
ACCGGTTTCATCGGTCAACCAACCCACGCCGTGTCGAGGATACTTGGTTG
TGTCCCTACGAACAACCAAATGTGGGGAGGAGGGTGTTTATTTACTGTGC
CGAACCCTGGTAAAATGTTGCTCTAATGGTGTGCTTCCGATTAGTTCTAT
TTTGAAAGTGCACATACTGGAAAAGCCACACGGTGCTTTGTCCGCGCTTG
GCCATCGTTGCCAAAGTACTGACTCGTTTTTGCCTCGGTTGTTTTGTCTG
GTTCATTTCTTCAGGCATGCACTATCCCGAGTCGAGGTTCTACGTACGGC
GCGTGAAATTGTCTTCAGATGCTGACGTGCTGGGACCATTGCGAGACGCG
GGTTACAG GTTTGGTCCGACTTCCTGGCTTCCGCCCACTGCTGCTGCACG
TTAACGCGGTCCTCCCTCGCTTGGTAAGCAGCAACCGAGAGGCGTGCCTT
AGGTTGTGAGTTCCTCTTAAAAGTGCACGAGACAGCATGCCCCCCTTGTG
TGCGCCACCTACACCTCAGGCTGGAGCCTGCAGCTGAAAATCCAGAGGTC
ACAGTGGTAGTTGAAGTCCCCGTCGACGCGGGGGAAGGCGTGCGGACCGC
AAGAGACCTGAGCATGTGGGAGCAGCTTAGCTTTGCTGCTTTCTTGCAGC
GATATTGGGCTGACAACCAGGCAAGCAT GTTCCGTCGCATAGCGGGCTTA
ATCTGAAAAGTTGGTATTGCTGCATGTGCTCCTTGACATGTAGGCTACTT
CCGTCGGTCACCCAGACGCTGACGGGCTGGTTGAAGCAGCCCTCGTGCGT
CTTCAAAGGCCGAGGAGCGGAGAGCAGAAGAATCCCCTCAACTGCGTTGA
AAAACCCAAATTATCAAATTGTGCGTTCATCCGTAAAAGGATGTGCCAGA
CAACAAACTTGGACCGCTTTCACTGCCCCATAATTGCTTTTGTTTGGCTC
CAGGTGAGCTGCACTATTACCTTCGACCCGTCGAAGGAAGGCCAGTACCT
GGCTCACGCGCTCGACTACTTTCAGTACCAGCTCAAGGGCGTGAGCTTCC
TTCCTAGGATGGACTACGGCGCATTCCCTCAG GTTTGTGTCTGGGTCGGT
TGGCCGGTCGTGGTATCAATGCGACATACCGTACACCACGCTGTCGTAGC
CCACCCCACCACCACCTTTTCGGCCTAGAATCATGATCTCTCTACGAACG
CCCCGGGGGAGCATGATTTTTTCACAGCCCCCCCCCCCTTTTTCCATTTA
CCCCCGGGGAAAGTGTGCTTTCACGGGAAAAAAAAACGGGGCTACGACAG
AGATTTTTCCCCACTTGACATGGTACTTTACCACCAAGCAGCGTTCATTT
GGGATGGAATTTCATGGCTTACTGTCGGCAGAACGGGTGCGTCACTGCGC
CATGAGCATCAAGTCACATCGAGCATTGTGAAAGGTCATCGTTGTGTGCT
GGTTACATGGCGAAGCATGATTTATCTCTGAGCGCCCCGAGGGAACATGC
TTTTGTCACAAAAAAAAAAACATTTTTCCATTTACCCCCGGGGCACACTA
CGGGGGGTTACGACAGCGCAGGTTACGGTGGTTCCGCCGTGTGGGTTTTT
CTTTTTTTGAAGTGGAGATCCGTTCAAGCTACCGACCCCGCATTCATCCC
CCCGTCCTCTAAACTAGTCTATCTGTTCTCCTTTTTTTACCGTGTTCTTA
GATGCCGTACGAGGCAATATCGGAGGAGCAGTACAAGCACCAGACGTCCA
AGCTGCGGAAGTTGGATTTCACACGACGAGATGGGCAATCTCCAAGAGGT
GGTGTGCGTGTGGAAGAGGTTCCGGACAAATTTTGCGAGACAGATGCGTG
TGTAAATACGGTGAGTGGTTGTCTCGCGTGA TGCTAGTAAATTAGATCGG
TGGGGTCCTG back to top Coding sequence (CDS) from alignment at C-linearis_contig101:589622..596331-
>mRNA_C-linearis_contig101.762.1 ID=mRNA_C-linearis_contig101.762.1|Name=mRNA_C-linearis_contig101.762.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2502bp|location=Sequence derived from alignment at C-linearis_contig101:589622..596331- (Chordaria linearis ClinC8C monoicous) back to top