mRNA_C-linearis_contig101.762.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match: D7FJK6_ECTSI (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK6_ECTSI) HSP 1 Score: 755 bits (1949), Expect = 6.160e-265 Identity = 366/427 (85.71%), Postives = 401/427 (93.91%), Query Frame = 3 Query: 753 PVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRG---GVRVEEVPDKFCETDACVN 2024 P+ KPLSVTAIVD+MNKVGVCVVAGNVRRTAEIAFGDPGS+EYIDLKNYDKNP+R++FGWASNNSVLA LGMDYTKVCERI++NGEPGFAWLENMR Y RMG EKNDRD KA+GGNPCLEQTLESFEMCCLVETFPDKH+SLED+LTTLRFA +YAKTVTLG THW++TNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGY+AV+R+DEDLS FGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFY+RRV+++SDADVLGPLR+AGYRLEPAAENPE T+VVEVPVDAGEGVRTA+DLSMWEQLSFAAFLQRYWADNQ S CTITFDP EG +LAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISE++YK Q SKLR L+F+RR GQ+ RG GVRVEEVPD++CE+D+C + Sbjct: 284 PLIGKPLSVTAIVDLMNKVGVCVVAGNVRRTAEIAFGDPGSDEYIDLKNYDKNPDRASFGWASNNSVLAPLGMDYTKVCERIQQNGEPGFAWLENMRTYGRMGDEKNDRDSKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLTTLRFAMLYAKTVTLGGTHWDKTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPEGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRYWADNQVS-CTITFDPETEGHHLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEDEYKSQISKLRHLNFSRRRGQT-RGEGDGVRVEEVPDRYCESDSCTD 708
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match: A0A835YMD1_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMD1_9STRA) HSP 1 Score: 603 bits (1555), Expect = 2.850e-205 Identity = 292/422 (69.19%), Postives = 343/422 (81.28%), Query Frame = 3 Query: 753 PVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRGGVRVEEVPDKFCETDAC 2018 P+ + L+VTAIVD+MNK+G CVVAGNVRRTAEIAFGDP S EYI+LK+YD NP+R+++GW SNNSV+A LGMDYT VC+R+ NGEPGFAWL+NMR YSRM + +D +A GGNPCLEQTLES+EMCCLVETFP++H+SLED+ TLR AF YAKTVTLG THW QTN I+ RNRRIGCSMSGLAQFVAARGLG L+ WCE GY AV D LS FG+ SIKTTSIKPSGTVSLLAGATPGMHYPE+RFYVRRV++++++++L PLR AG +EP A NP TVVVE+PVDAGEGVRT+R+L++WEQLSFAAFLQRYWADNQ S CT+TFDP E L HALDYFQYQLKGVSFLPR+ GA+PQMPYEAIS QY + + ++F G+ R +EVPDKFC+TDAC Sbjct: 263 PLAGRDLTVTAIVDVMNKIGKCVVAGNVRRTAEIAFGDPDSAEYINLKDYDVNPHRASYGWTSNNSVMATLGMDYTDVCKRVAANGEPGFAWLDNMRAYSRMDDAPDHKDARARGGNPCLEQTLESYEMCCLVETFPNRHESLEDFEATLRCAFAYAKTVTLGVTHWPQTNVIMARNRRIGCSMSGLAQFVAARGLGALRAWCEHGYAAVQAADSALSTRFGVHRSIKTTSIKPSGTVSLLAGATPGMHYPEARFYVRRVRVAAESELLAPLRAAGLPVEPCAMNPG-TVVVEIPVDAGEGVRTSRELTLWEQLSFAAFLQRYWADNQVS-CTVTFDPETEAAQLPHALDYFQYQLKGVSFLPRIAAGAYPQMPYEAISAAQYAERMRSVSPVNFAALRGRRQRRAADADEVPDKFCDTDAC 682
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match: W7T512_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T512_9STRA) HSP 1 Score: 593 bits (1528), Expect = 4.660e-199 Identity = 285/431 (66.13%), Postives = 347/431 (80.51%), Query Frame = 3 Query: 738 QGHPGPVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSP---RGGVRVE----EVPDKFCET 2009 QG P+ +P+SVTAIVD+MN +G CVVAGNVRRTAEIAFG P EEY+DLKNY+KNP+R+A+GW SNNSV A +GMDY VCER++RNGEPGFAWLENMR Y RMG + RD +A+GGNPCLEQTLESFE+CCLVETFPDKH SLED+L TL+FAF+YAKTVTLG THW +TN ++ RNRRIGCSMSGLAQFV +G+G L WCEEGY+ + D+ S IP S+KTTSIKPSGTVSLLAGATPGMH+PESRFY+RRV+L+ ++++L PL + GY +EPAA +PE T VVE+PVD GEGVRT +++ +WEQ++FAAFLQR+WADNQ S CT+TFDP+ EG+ LA ALD FQYQLKG+SFLP+M+ GA+PQMPYE ISEE+Y+ +T +LR G+ P RGG VE E+ DKFCE+ Sbjct: 442 QGVLDPIVGEPVSVTAIVDMMNLIGKCVVAGNVRRTAEIAFGAPEDEEYVDLKNYEKNPHRAAYGWTSNNSVFASVGMDYENVCERVQRNGEPGFAWLENMRAYGRMGSPPDWRDARAMGGNPCLEQTLESFELCCLVETFPDKHDSLEDFLATLQFAFLYAKTVTLGPTHWAKTNAVMLRNRRIGCSMSGLAQFVTRKGMGELHRWCEEGYQTLQEADQRYSEWLSIPRSVKTTSIKPSGTVSLLAGATPGMHFPESRFYLRRVRLAKNSELLPPLLEVGYVVEPAAGDPERTCVVEIPVDVGEGVRTLKEVGLWEQVAFAAFLQRHWADNQVS-CTVTFDPATEGKDLARALDVFQYQLKGISFLPKMEAGAYPQMPYEEISEEEYRERTERLR--------GRRPDFWRGGAAVEDKKEELLDKFCES 863
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match: A0A6H5KM58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM58_9PHAE) HSP 1 Score: 584 bits (1505), Expect = 5.170e-199 Identity = 312/497 (62.78%), Postives = 346/497 (69.62%), Query Frame = 3 Query: 753 PVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKV------------------------------------CERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASI----------------------------------CTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRG---GVRVEEVPDKFCETDACVN 2024 P+ KPLSVTAIVD+MNKVGVCVVAGNVRRTAEIAFGDPGS+EYIDLKNYDKNP+R++FGWASNNSVLA LGMDYTKV CERI++NGEPGFAWLENMR Y RMG EKNDRD KA+GGNPCLEQTLESFEMCCLVETFPDKH+SLED+LTTLRFA +YAKTVTLG THW++TNEILFRNRRIGC + G + RG D+S GMHYPESRFY+RRV+++SDADVLGPLR+AGYRLEPAAENPE T+VVEVPVDAGE VRTA+DLSMWEQLSFAAFLQRYWADNQAS CTITFDP EG++LAHALDYFQYQLKGVSFLPR DYGAFPQMPYEAISE++YK Q SKLR LDF+RR GQ+ RG G RVEEVPD++CE+D+C N Sbjct: 177 PLIGKPLSVTAIVDLMNKVGVCVVAGNVRRTAEIAFGDPGSDEYIDLKNYDKNPDRASFGWASNNSVLAPLGMDYTKVHNGTQLSRLFYSSFSISNGCNRGVARVLMDVSNAKVCERIQKNGEPGFAWLENMRAYGRMGDEKNDRDSKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLTTLRFAMLYAKTVTLGGTHWDKTNEILFRNRRIGCRLRGSP--LDHRG--------------------DMSR--------------------------TGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPEGTMVVEVPVDAGEAVRTAQDLSMWEQLSFAAFLQRYWADNQASFLCFGALTLRTWIFTSHASTLCIQRYTPFVFVQVSCTITFDPDTEGKHLAHALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQT-RGEGDGARVEEVPDRYCESDSCTN 624
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match: A0A835ZHW0_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHW0_9STRA) HSP 1 Score: 577 bits (1488), Expect = 1.260e-194 Identity = 282/425 (66.35%), Postives = 336/425 (79.06%), Query Frame = 3 Query: 753 PVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFT----RRDGQSPRGGVRVEEVPDKFCETDA 2015 P+ + L+VTAIVDIMNK+G CV+AGNVRRTAEIAFGDP EEY++LK+YD NP+R++FGW SNNSV+ LGMDYT VC+R+ NGEPGFAWL+NMR + RMG+ +D+D A GGNPCLEQTLES+EMCCLVETFP +H +LED+ TLR AF YAKTVTLGA HW +T L RNRRIGCSMSGLAQF AARGL TL+ WC+ GY + D LS+ G+P SIKTTSIKPSGTVSLLAGATPGMHYPE+RFYVRRV++++D +L LR AG R+EP A +P T VVE VDAGEGVRTAR+L +WEQLSFAAFLQR+WADNQ S CT+TFDP E L HALDYFQYQLKGVSFLPR+ GA+PQMPYEAI+ +QY + S + ++F R G+ RG V+EVPDKFC++D+ Sbjct: 279 PLVGRSLTVTAIVDIMNKIGKCVIAGNVRRTAEIAFGDPDDEEYVNLKDYDANPHRASFGWTSNNSVMCPLGMDYTAVCKRVAANGEPGFAWLDNMRRFGRMGNPADDKDAAASGGNPCLEQTLESYEMCCLVETFPHRHDTLEDFEATLRCAFAYAKTVTLGAPHWPRTAAALLRNRRIGCSMSGLAQFAAARGLPTLRAWCDRGYATIQTTDAALSSRLGVPRSIKTTSIKPSGTVSLLAGATPGMHYPEARFYVRRVRVAADCALLPALRAAGLRVEPCALSPATTAVVEFAVDAGEGVRTARELPLWEQLSFAAFLQRHWADNQVS-CTVTFDPETEAAQLPHALDYFQYQLKGVSFLPRIAAGAYPQMPYEAITAQQYAERMSAVTPVNFNFNCAARAGR--RGADDVDEVPDKFCDSDS 700
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match: A0A8J5M3B0_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M3B0_9STRA) HSP 1 Score: 562 bits (1448), Expect = 1.940e-189 Identity = 274/423 (64.78%), Postives = 323/423 (76.36%), Query Frame = 3 Query: 753 PVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRGGVRVEEVPDKFCETDACV 2021 P+ KPL+ IVDIMN++GVCVV+GNVRRTAEIAFGD EEYIDLKNY+KNP+R+AFGW SNNS+ A +GMDY + ERI RNGEPGFAWLENMR + RM K+D D+ A GGNPCLEQTLES+EMCCLVETFP H SLED+L TL+FA+MYAKTVTLG T W +TNE++ RNRRIGCSMSG+AQF++ RGL Q WCE GY V VD+ LSA F IP SIKTTSIKPSGTVSLLAGATPGMHYPESRFY+RR++L + +D+L L+ A Y +EPA E+P T+VV +PVD GEGVRT D+S WEQ + AAFLQR+WADNQ S CT+TFDP EG LAH LDYFQYQLKG+S LP+++ GA+ QMPYE IS Y + L F + V +VPDK+CE ACV Sbjct: 279 PLAGKPLTARGIVDIMNQMGVCVVSGNVRRTAEIAFGDYNDEEYIDLKNYEKNPDRAAFGWTSNNSIFADIGMDYKPIAERIVRNGEPGFAWLENMRNFGRMNGIKDDCDRNASGGNPCLEQTLESYEMCCLVETFPYNHDSLEDFLETLKFAYMYAKTVTLGQTRWPRTNEVMRRNRRIGCSMSGIAQFISNRGLNDFQRWCEAGYDRVQEVDKQLSARFAIPRSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRMRLDNHSDLLPALQRAEYAIEPAHESPNTTLVVSIPVDVGEGVRTLSDVSAWEQFALAAFLQRHWADNQVS-CTVTFDPKTEGPQLAHMLDYFQYQLKGISLLPKLELGAYKQMPYEEISARTYHKMNQSIEPLQFN-----VIQSIETVIDVPDKYCE--ACV 693
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match: A0A661VGD2_9CHLR (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A661VGD2_9CHLR) HSP 1 Score: 561 bits (1446), Expect = 2.890e-189 Identity = 259/417 (62.11%), Postives = 332/417 (79.62%), Query Frame = 3 Query: 768 PLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRGGVRVEEVPDKFCETDAC 2018 P+S+T+IVDIMN +G CVVAGNVRRTAEI FG+P ++EY+DLKNY+ NP+R+ +GW SNNS+ A+LGM+Y ER+R NGEPG+AWLENMR Y RM N +D +A+GGNPCLEQTLES+E+CCLVETFP+ H SL+DYLTTL++A++YAKTVTLG THW +TN ++ RNRRIGCSMSG+AQF+A RG+G L++W +EGY+ + +D++ S IP SIKTTSIKPSGTVSLLAGATPG+H+PESR+Y+RR++L D++++ PL AGY++EPA + + T+VVE+PVD G GVRT +SMWEQLS AA QRYWADNQ S CT+TFDP +EG +A ALD +QYQLKG+SFLPR+DYGA+PQMPYEAI +E Y + S L KL F R G+ E V ++FC++D C Sbjct: 254 PISITSIVDIMNLIGKCVVAGNVRRTAEIVFGEPDNDEYLDLKNYEVNPHRAEYGWTSNNSIFAELGMNYEPSAERVRYNGEPGYAWLENMREYGRMADAPNFKDHRAMGGNPCLEQTLESYELCCLVETFPNNHDSLDDYLTTLKYAYLYAKTVTLGKTHWPETNRVMLRNRRIGCSMSGIAQFIANRGIGKLRQWMDEGYEHIQDLDKEYSDWMAIPRSIKTTSIKPSGTVSLLAGATPGIHFPESRYYIRRMRLGKDSNLVAPLEKAGYKIEPAFGSEDTTLVVEIPVDVGAGVRTVDKVSMWEQLSIAALAQRYWADNQVS-CTVTFDPEEEGPQIAAALDIYQYQLKGISFLPRLDYGAYPQMPYEAIDKESYDNMKSALGKLSFGRIKGE--------EVVVERFCDSDVC 661
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match: A0A2E6KDL5_9EURY (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6KDL5_9EURY) HSP 1 Score: 556 bits (1432), Expect = 1.270e-187 Identity = 258/418 (61.72%), Postives = 330/418 (78.95%), Query Frame = 3 Query: 768 PLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRGGVRVEEVPDKFCETDACV 2021 P+++T IVDIMN +G CVVAGNVRRTAEI FGDP SEEY+DLKNY+ NP+R +GW SNNS+ A+LGMDY++ C+RI NGEPGFAWLENM+ YSRM + K+++D +A+GGNPCLEQTLES+E+CCLVETFP KH+SLEDYL TL++A++YAKTVTLG THW +TN ++ RNRRIGCS+SG+AQF+ RG+G L+EW E GY + R+D+ S IP SIKTTS+KPSGTVSLLAG+TPG+HYPESRFY+RR++LS ++++L PL AGY++EPA + + TV +EVP+D G+G+RTA L++WEQ S AAF+QR+WADNQ S CT+TFDP KE + L L+YFQYQLKG+S LPR D GA+ QMPYEAI E+ Y T KL+ L FT+ G+ +KFC+ D C+ Sbjct: 247 PITITTIVDIMNLIGKCVVAGNVRRTAEIVFGDPYSEEYMDLKNYEVNPHRDQYGWTSNNSIFAELGMDYSEACKRIVGNGEPGFAWLENMQGYSRMKNGKDNKDHRAMGGNPCLEQTLESYELCCLVETFPYKHESLEDYLKTLKYAYLYAKTVTLGKTHWPETNRVMLRNRRIGCSVSGVAQFLTYRGVGELREWLETGYDEIQRLDDVYSDFLAIPKSIKTTSVKPSGTVSLLAGSTPGVHYPESRFYIRRMRLSVNSELLQPLEAAGYKVEPAFGSEDSTVCIEVPIDVGDGIRTADQLTVWEQFSLAAFMQRHWADNQVS-CTVTFDPDKEAEQLEQCLNYFQYQLKGISCLPRFDAGAYKQMPYEAIDEKSYNKMTKKLKPLSFTKMKGEDAEA--------EKFCDGDVCL 655
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match: H3GD43_PHYRM (Ribonucleoside-triphosphate reductase (thioredoxin) n=4 Tax=Phytophthora TaxID=4783 RepID=H3GD43_PHYRM) HSP 1 Score: 552 bits (1423), Expect = 1.100e-186 Identity = 266/421 (63.18%), Postives = 318/421 (75.53%), Query Frame = 3 Query: 753 PVDWKPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRGGVRVEEVPDKFCETDA 2015 P+ KPL+ IVDIMN++GVCVV+GNVRRTAEIAFGD EEY+DLKNY+KNP R+AFGW SNNS+ A +GMDY + ERI NGEPGFAWLENMR Y RM K+ RD+ A GGNPCLEQTLES+EMCCLVETFP H SLED+L TL+FA+MYAKTVTLG T W +TN ++ RNRRIGCSMSG+AQF++ RGL Q WCE GY + +VD+ +SA F IP SIKTTSIKPSGTVSLLAGATPGMHYPESRFY+RR++L +D+L L+ AGY +E A E P+ T+VV +PVD G+GVRT D+S WEQ + +AFLQRYWADNQ S CT+TFDP EG LAH LDYFQYQLKG+S LP+++ GA+ QMPYE I+ Y + L F + V +VPDK+CE A Sbjct: 211 PLAGKPLTARGIVDIMNQMGVCVVSGNVRRTAEIAFGDYNDEEYVDLKNYEKNPERAAFGWTSNNSIFADIGMDYKPIAERIVLNGEPGFAWLENMRNYGRMNGIKDGRDRNASGGNPCLEQTLESYEMCCLVETFPFNHDSLEDFLETLKFAYMYAKTVTLGQTQWPRTNNVMQRNRRIGCSMSGIAQFISNRGLNEFQRWCEAGYDRIQQVDKLISARFAIPRSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRMRLDKHSDLLPALQRAGYDIESANEAPDSTLVVSIPVDVGKGVRTLSDVSAWEQFALSAFLQRYWADNQVS-CTVTFDPKTEGLQLAHMLDYFQYQLKGISLLPKLELGAYKQMPYEEINARTYHKMNQSIEPLQF------NVIQSTEVLDVPDKYCEACA 624
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Match: K3X6L5_GLOUD (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6L5_GLOUD) HSP 1 Score: 553 bits (1425), Expect = 3.250e-186 Identity = 258/414 (62.32%), Postives = 322/414 (77.78%), Query Frame = 3 Query: 765 KPLSVTAIVDIMNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNSVLAKLGMDYTKVCERIRRNGEPGFAWLENMRMYSRMGHEKNDRDKKALGGNPCLEQTLESFEMCCLVETFPDKHKSLEDYLTTLRFAFMYAKTVTLGATHWEQTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYKAVARVDEDLSAHFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYVRRVKLSSDADVLGPLRDAGYRLEPAAENPEVTVVVEVPVDAGEGVRTARDLSMWEQLSFAAFLQRYWADNQASICTITFDPSKEGQYLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEEQYKHQTSKLRKLDFTRRDGQSPRGGVRVEEVPDKFCE 2006 KPLS IVD+MN +GVCVV+GNVRRTAEIAFGD EY++LK+Y+KNP+R+A+GW SNNS+ A LGMDY + +RI +NGEPGFAWLENMR + RM ++ RD+ A GGNPCLEQTLES+EMCCLVETFP H S+EDYL TLRFA++YAKTVTLG THW +TN ++ RNRRIGCSMSG+AQF++ GL LQ+WC+ GY A+ DE S F IP SIKTTS+KPSGTVSLLAGATPGMHYPESRFY+RR++L +D++ L+ Y +EPA E P+ T+VV +PVD G GVRT ++S WEQ++ A+FLQRYWADNQ S CT+TFDP EG +LAHAL+YFQYQLKG+S LP+++ GA+ QMPYEAI E Y+ ++L+ L F +S + + +VPDKFCE Sbjct: 266 KPLSARHIVDLMNHIGVCVVSGNVRRTAEIAFGDYKDPEYVELKDYEKNPDRAAYGWTSNNSIFADLGMDYAPITDRIIKNGEPGFAWLENMRKFGRMNGHEDHRDRNAAGGNPCLEQTLESYEMCCLVETFPAAHTSVEDYLETLRFAYLYAKTVTLGPTHWPRTNRVMLRNRRIGCSMSGVAQFISQHGLHELQQWCDRGYYAIQEYDEQFSNQFAIPRSIKTTSVKPSGTVSLLAGATPGMHYPESRFYIRRMRLDKQSDLVPALQKGEYDMEPAVEAPDSTLVVSIPVDVGHGVRTLNEVSAWEQMALASFLQRYWADNQVS-CTVTFDPKTEGPHLAHALNYFQYQLKGISLLPKLELGAYKQMPYEAIDEATYREMHARLKPLVF-----ESVKTKETIIQVPDKFCE 673 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.762.1 >prot_C-linearis_contig101.762.1 ID=prot_C-linearis_contig101.762.1|Name=mRNA_C-linearis_contig101.762.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=417bp MNKVGVCVVAGNVRRTAEIAFGDPGSEEYIDLKNYDKNPNRSAFGWASNNback to top mRNA from alignment at C-linearis_contig101:589622..596331- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig101.762.1 ID=mRNA_C-linearis_contig101.762.1|Name=mRNA_C-linearis_contig101.762.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6710bp|location=Sequence derived from alignment at C-linearis_contig101:589622..596331- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig101:589622..596331- >mRNA_C-linearis_contig101.762.1 ID=mRNA_C-linearis_contig101.762.1|Name=mRNA_C-linearis_contig101.762.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2502bp|location=Sequence derived from alignment at C-linearis_contig101:589622..596331- (Chordaria linearis ClinC8C monoicous)back to top |