mRNA_C-linearis_contig101.760.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: D7G9G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G4_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 2.780e-119
Identity = 180/207 (86.96%), Postives = 187/207 (90.34%), Query Frame = 1

Query:  334 QPSLAAEAMATEFVDFVDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQVVTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATVDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNMDWEQEGGAKERLKVAADSFRLEGLVVDGVRLGA 954
            QPS AAE  ATEFVDF DSRGLF CRIPKNFLRAER KDKRGTVFVAGDYSKAEV+SVQVV  FDLL DAGLPTIGDLTKWENVGKP  +ADLLKQRRDSDAAGG  VES VLPG T+DG VLQF LKSPIKVMR DLLEKEQGVSELYRNTYVKAIMRGDGSFLV+WAGALN DW+QEGGAK+RLKVA DSFRLEGL+VDGVRLGA
Sbjct:   32 QPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGA 238

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BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: A0A6H5KHB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB6_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 8.360e-117
Identity = 200/311 (64.31%), Postives = 221/311 (71.06%), Query Frame = 1

Query:   40 CLRKGPLNMLPHTTLIILALCHPAIAFSPSSW------SARSARPDEDKDSHQPSRLQRRRRLPVCVAQSEAQVDTMDRARFLRRTAATSVAALAGGLAAPSGLQPSLAAEAMATEFVDFVDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQVVTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATVDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNMDWEQEGGAKERLKVAADSFRLEGLVVDGVRLGA 954
            C R+          +++LALC   IAF+P ++      +   A P   K  H       +++ P  +A      D   RA FLR  A                  PS AAE  ATEFVDF DSRGLF C IPKNFLRAER KDKRGTVFVAGDYSKAEV+SVQVV AFDLL DAGLPT+GDLTKWENVGKP  +ADLLKQRRDSDAAGG  VES VLPG T+DG VLQF LKSPIKVMR DLLEKEQGVSELYRNTYVKAIMRGDGSFLV+WAGALN DW+QEGGAK+RLKVA DSFRLEGL+V+GVRLGA
Sbjct:    6 CFRRVQPTKSSCKAVVVLALCCRVIAFAPFAFHPTRRNTPSIAPPSAFKWKHA------QQQQPRMLA------DMDSRAGFLRTAAXXXXXXXXXXX--XXXXXPSSAAEVAATEFVDFEDSRGLFSCLIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKAFDLLTDAGLPTVGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVEGVRLGA 302

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BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: A0A835Z4Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q3_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.680e-45
Identity = 107/236 (45.34%), Postives = 138/236 (58.47%), Query Frame = 1

Query:  235 AQVDTMDRARFLRRTAATSVAALAGGLAAPSGLQPSLAAEAMATEFVDFVDSRGLFGCRIPKNFLRAERPKDK--RGTVFVAGDYSKAEVMSVQVVTAFDLLKDAG-----LPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATV-DGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNMDWEQEGGAKERLKVAADSFRL 918
            A    +DR RF   TA+    A+AG L  P   QP++A          + DSRG F   +P N++RAER  D+  +G +FV G+Y KA  +SV ++ +  LL+DAG     LPT  DLT W  VG P  +A LL  RRD DAA     +S VLP   V DG  L F +K+ + V R DLLEKE+GV ELYR TY KA+MRGDG+FL+ WAGALN +W +   A++ L     SF L
Sbjct:    4 AAASAIDRRRFAAGTAS----AIAGVLLLP---QPTVAE---VPSLAAYSDSRGYFEISLPANWVRAERKGDQEAKGVLFVTGNYVKAITLSVAIIKSSQLLRDAGTAPLVLPT-DDLTTWAGVGTPMGIAKLLAFRRDQDAAQAAAQDSEVLPDTVVLDGNALTFMIKTRVPVQRPDLLEKERGVRELYRLTYGKALMRGDGTFLLCWAGALNTEWGEPTNARDTLAAVVASFHL 228

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BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: A0A7S0QY41_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QY41_9CRYP)

HSP 1 Score: 123 bits (309), Expect = 1.160e-28
Identity = 75/177 (42.37%), Postives = 99/177 (55.93%), Query Frame = 1

Query:  349 AEAMATEFVDFVDSRGL---FGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQVVTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGAT-VDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNMDWEQ 867
            A+A   E+  F +  GL   F   IPK F +++RP    GT+FVAG    AE++SVQ+V+   LL D G+   GDL+ WE +G    +ADLL   RD DA     + S V P +  V G  L F   + I V R D L + QG+SEL R T  +A +R DG+ LVLWA AL  DW +
Sbjct:   63 ADAEVYEYSAFKEDGGLDAVFRADIPKEFFKSKRPLTN-GTIFVAGSLQTAEIVSVQIVSIPQLLADIGVLPTGDLSTWEAIGSAKAIADLLTSNRDGDAKQRGGLASKVDPASVAVSGRTLSFRTAATIAVQRPDKLLETQGISELRRITRARAEIRRDGTALVLWASALEQDWNK 238

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BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: K0RXZ5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXZ5_THAOC)

HSP 1 Score: 113 bits (282), Expect = 1.460e-24
Identity = 81/213 (38.03%), Postives = 116/213 (54.46%), Query Frame = 1

Query:  346 AAEAMATEFVD-----FVDSRG--LFGCRIPKNFLRAER------PKDKRG------TVFVAGDYSKAEVMSVQVVTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATV----DGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRG-DGSFLVLWAGALNMDWEQEGGAKERLKVAADSF 912
            A++A+A E  D     FVD+    LF   +P+ F    R      P +K G      T+F AGD SKAEV++V+      LL++ G   +GDL+ +E +G PT +A LL +RR+ D  G + V  AVL   +V    DG  L+FT+K  I V + +LL +E GVS L+R T  KA +   DG+ LV++A AL+ D+    G    L+   DSF
Sbjct:   60 ASKALAEEATDVPMKLFVDTANPSLFAINVPQRFFAIRRSAKGDLPDEKTGKGRRGGTIFSAGDMSKAEVVAVERFPVKVLLEEEGYSPLGDLSTFEAIGDPTAIATLLLRRREKDRPGNVSV--AVLDKDSVVVTEDGKTLKFTMKQEISVQKPELLMEEMGVSRLFRTTVAKATLSSNDGNLLVVFASALDQDFSGPDGVA--LRKTVDSF 268

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BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: A0A7S2MYB7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MYB7_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 4.230e-12
Identity = 59/200 (29.50%), Postives = 98/200 (49.00%), Query Frame = 1

Query:  382 VDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQVVTAFDLLKD-------AGLPTIGDLTK------WENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATVDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMR----GDGS----FLVLWAGALNMDWEQEGGAKERLKVAADSFRL 918
            +D+   F   IP +F+ ++R K   GT+FVAG++ +A V+SV       LL+D        GLP    + +      + ++G    VA LL + RD DA+ G    +  L   + DG+ L+F   + + V   D LE+++GV +L R T   +++     GDG+       +W  AL  DW+++   K  L+    SF +
Sbjct:   45 LDAASRFALDIPDDFVVSKR-KAVTGTLFVAGNFPRASVISVTAWPLDALLQDDARSRALPGLPQELVIAEHATPLSFTDIGSAKSVAQLLLRARDRDASSGALQSALTLSQLSSDGSRLEFECATELPVSDPDALEEQRGVRQLIRRTRAASVLGSVPGGDGAPVPALFSVWGSALEQDWDKD--LKAPLEKTVSSFSV 241

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot

BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6

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POSITION

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Match Name	E-value	Identity	Description
D7G9G4_ECTSI	2.780e-119	86.96	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KHB6_9PHAE	8.360e-117	64.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835Z4Q3_9STRA	1.680e-45	45.34	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S0QY41_9CRYP	1.160e-28	42.37	Hypothetical protein (Fragment) n=1 Tax=Cryptomona...	[more]
K0RXZ5_THAOC	1.460e-24	38.03	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A7S2MYB7_9EUKA	4.230e-12	29.50	Hypothetical protein n=1 Tax=Haptolina brevifila T...	[more]