mRNA_C-linearis_contig101.759.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig101.759.1 vs. uniprot
Match: A0A6H5KGG6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGG6_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 3.550e-88
Identity = 382/1058 (36.11%), Postives = 482/1058 (45.56%), Query Frame = 2

Query:  353 MASTLCGCWQSWPMRRANRTEQEVSRGVSRKARRHIVKVRMPER---------------SEGGKPSPTTTEARKNHG---DMRSPLGFENRRNPLEERAKRKKHVGQDGGDAGTAAVAVKIRKGGFFGVFRRPV--GGADD-VVHVPVGQICVICMEPFKPNEVLEVLLCQHLYHERCINRWLGDHTSCCVCKADMEEMAKAIRKPSRRRCSRARSETRSERSES--FRSESGYGSDQARSTWSSVSAPAAFAGRVPPDSSSXXTSPQPSHERATALRRAPPSSFPIPSLMNPRSPASIRATAPTRNTTSQATNRL-------PGTPTAATGGRAAAIASSGSSARLAGP-GVRAPALRLSVSTFP----------------------------------------SEWNLESGRD-SEERSNSCSSSXXX---------GTISSINSND-EDHSRASRASRWFVFRNPPCIEPTAWSSENSVNASSMRFPSFQGPSQSPSPAR--------------------VSNPSPRREHLSPAAINQL-------PRGPSSSPPWSSARSILRSPAQSHRRPPSPHPESRSAVASRISQ-------TIPRVSPPAASPAP-PLTCAQERPRREFPSAVATLSTPQRMRRNS--QPALSFLVERSLSCMLSGQVST-------TLRQQW-GSPSTPRRLPQSQSQPTPARSTPARRRQWV------PEQGTMAAS-ISSCLRNGGESGRRKPLWGERNLT-MEEETRCNELE--------KSATLGGVIDAKRA--VGERLERWAQERG-AKASFASSRARDNVSMRKVWREGGFTTEEG---------------KEESAARGDDGAGAEM-LPGAWLPAKTAKPAD-DWD---PASDSLLPNLKFNGWANTQEDEAWLEDF-DKTPSSEIGSHKTCSTQWSEMESQLSGVESQLLGNSYAGA--EGSVMGALPPRRRPISA--LPTSPRQYVPAVAEAKCPP------SLSVVVSPTAIKQCEDPWHCRADGAGTDTXXXXXXXXXXXXALRARSVSAPMIWD 2995
            MA+TL GCWQ WPMRRA R+E+E SRGVSRK +     +RMP +               S+GG    T++ +    G    + + +  E+    +     ++K   +DG     AAVAVK+RKGG FGV RRP   GGADD VVHVP G+ICVICMEPF+ N+VLEVLLCQHLYH+RCI+ WLG HTSCCVC ADMEEMA+A                          RSESGY SDQARST SS+SAPAA A R+P DS           +R  A    PP   P+P  + PR   +  A  P+R       +R        PG   AA  GR+              P   R+PA R +V T                                          SEW L+SG D S ER  S +SSXXX         G  SSI+S+D ED   + R ++   F       P +       + +S  F S +   +S  PA                     + +  P   HLSPAA++         PR  S S P    R+ +  P    +   S  P  R                T P  SPP    A      A E PR  FPSAVATLSTPQRMRR S  Q A SF VE +L    SG  ++       T +++W  SPSTPR  P   S    A +TP+RR + +      P +G + A   ++  R+GGE GRR+  WGE+  T  EEE     +         + A   G +  K+   +G  + R    RG A A    S     V +R+ W                         K++  AR    AG ++ +  A  P         DWD   PA+  L         A   E++ W EDF +K+P SE GSHKTCSTQWSEM+SQ     SQ  GNSYAG+    S M A P  RR + +    TSPR + P +AEAK PP      SL+VVVS    K   +P + R D +G DT     XXXXXXX LRARS SAPMIWD
Sbjct:    1 MATTLSGCWQWWPMRRARRSERETSRGVSRKVKSRFTTIRMPAQVSSAGPAGRGRPHSPSDGGGGEETSSVSCAALGAVAGLETDIIGESSGGAIGRHPSQQK---EDGDSQSAAAVAVKVRKGGLFGVLRRPTFGGGADDDVVHVPAGEICVICMEPFQANDVLEVLLCQHLYHQRCIHEWLGSHTSCCVCMADMEEMARATXXXXXXXXXXXXXXXXXXXXXXXXLRSESGYSSDQARSTLSSMSAPAALADRLPADSGRS--------DRPQASSGPPP--LPLPRTLQPRIGGTSHA-GPSRTFHQPRGHRRAAGVGGRPGESRAAPVGRSPTPIPKSLRPNPRWPRNPRSPARRSNVVTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLNTRLTPVSEWTLQSGADGSRERQISGTSSXXXXXXXXGSFCGNTSSIDSSDGEDQLPSDRVAQLSKFGEKRPSGPYSHRHTPRSHHASSTFLSGRSSERSGRPAAQXXXXXXXXXXXXXXPQRSGLLDRHPGVRHLSPAAVHDRAGAAEARPRSASGSSPLLLTRTEIVRPTSRAQGRASSTPSPRXXXXXXXXXXXXXXXXTSPTASPPNGEQAVLQRVSAPESPRSGFPSAVATLSTPQRMRRKSYAQRATSFSVEDTLLLASSGLAASGSGTAPATPQRRWEASPSTPRNWPIMTSS---AGNTPSRRHRRIRQRDSSPRRGVVGAGGPAAANRHGGEPGRRQS-WGEQKQTEAEEEIHGGGVSGFSGRVPGEGAAARGYVRTKQEQPLGVGVRRAGGGRGRASAPLTESSPSGGVVLRRSWEXXXXXXXXXXXXXXXXXXXXXXREKDDGVARLRGVAGFDVGVSTAGEPXXXXXXXGCDWDSPVPAAGGLDGRRSS---ATRAEEDRWPEDFLEKSPPSEPGSHKTCSTQWSEMDSQ-----SQGSGNSYAGSTNSSSAMSAHPAGRRSVHSRSTTTSPRPHAPTIAEAKRPPPASSSPSLAVVVSTGGPKSGPEPCNPREDVSGGDTPNLLTXXXXXXXXLRARSESAPMIWD 1032

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BLAST of mRNA_C-linearis_contig101.759.1 vs. uniprot
Match: D7G9G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G3_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 2.750e-35
Identity = 83/171 (48.54%), Postives = 102/171 (59.65%), Query Frame = 2

Query:  353 MASTLCGCWQSWPMRRANRTEQEVSRGVSRKARRHIVKVRMPER------SEGGKP-------SPTTTEARKNHGDMRSPLGFENRRNPLEERAKRKKHVGQDGGDAGTAAVAVKIRKGGFFGVFRRPV--GGADD-VVHVPVGQICVICMEPFKPNEVLEVLLCQHLYHE 817
            MA+T  GCW  WPMRRA R+E+E  RGVSRK +     VRMP +      + GGKP       S    ++  ++  + +  G E  R+      K       DG     AAVAVK+RKGG FGV RR    GGADD VVHVP G+ICVICMEPF+ N+VLEVLLCQH+YH+
Sbjct:    1 MATTFSGCWPWWPMRRARRSEREAPRGVSRKVKSRFTTVRMPAQVSSAGPAGGGKPHSPCGGGSGGEEKSSASYAAVGAVAGLETGRDGESSGGKHPSQQKDDGDSQPAAAVAVKVRKGGLFGVLRRTTVGGGADDDVVHVPAGEICVICMEPFQANDVLEVLLCQHMYHQ 171

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BLAST of mRNA_C-linearis_contig101.759.1 vs. uniprot
Match: D7G9G1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G1_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 2.550e-29
Identity = 163/432 (37.73%), Postives = 201/432 (46.53%), Query Frame = 2

Query: 1925 MRRNS--QPALSFLVERSLSCMLSGQVST---------TLRQQW-GSPSTPRRLPQSQSQPTPARSTPARR-RQWVPEQ--GTMAASISSC-LRNGGESGRRKPLWGERNLT-MEEETRCNELEKSATLGGVIDAKRA-----VGERLE--------RWAQERG-AKASFASSRARDNVSMRKVWREGGFTTEEG---------------KEESAARGDD------GAGAEMLPGAWL---------PAKTAKPADDWD---PASDSLLPNLKFNGWANTQEDEAWLEDF-DKTPSSEIGSHKTCSTQWSEMESQLSGVESQLLGNSYAGA--EGSVMGALPPRRRPIS--ALPTSPRQYVPAVAEAK------CPPSLSVVVSPTAIKQCEDPWHCRADGAGTDTXXXXXXXXXXXXALRARSVSAPMIWD 2995
            MRR S  QPA SF VE +L    SG  ++         T +++W  SPSTPR  P   S  +   S+  RR RQW   Q  G + A   +   R GGE GR +  WGER  T  EEE     +       G +  + A     VG +LE        R    RG A A    S     V +R+ W E  F+T++                K+E  AR         G   E  P             P     P  DWD   PA+  L  + + +     +E++ WLEDF +K+P SE GSHKTCSTQWSEMESQ     SQ  GNSYAG+    S M A P  RR +   +  TSPR + P +AEAK        PSL+VVVS    K   +PW  R D +G DT     XXXXXXX LRARS SAPMIWD
Sbjct:    1 MRRKSYTQPATSFSVEDTLLLASSGLTASASGTSPAPATPQRRWEASPSTPRNWPTMTSSASNTPSSRHRRIRQWDSTQLRGVVGAGGPAAGKRYGGEPGRSQS-WGERKETEAEEERHGGGVSGFGGWSGRVPGEGAAARVYVGAKLEQPLGVGVRRAGGGRGRASAPLTESSPSSGVVLRRSWEERKFSTKDEXXXXXXXXKRRTSREKDEGVARPRGVASFGVGVSTEGEPXXXXXDGGSPPSTPLSAKPPGCDWDSPVPAAGGL--DGRRSRATRAEEEDRWLEDFLEKSPPSEPGSHKTCSTQWSEMESQ-----SQGSGNSYAGSTTSSSAMSAHPAGRRSVHTWSSTTSPRPHAPTIAEAKRHPPASSSPSLAVVVSTGGPKSRPEPWKPREDVSGGDTPSLLTXXXXXXXXLRARSESAPMIWD 424

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BLAST of mRNA_C-linearis_contig101.759.1 vs. uniprot
Match: D7G9G2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G2_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 3.860e-13
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 1

Query:  832 VARRPHVMLRVQGRYGGDGKGYPEAFPS--PLLKGSIGNEIGEIRELQVGVRVRI*PGALHVVLSVGSSGFRWQSTSRQQ 1065
            +A +P V+LRV G +GGDG+G  E FPS  P   G+  ++IGEI E +VGVRV++ PG LH VL VGSS    Q+  RQ+
Sbjct:    1 MAGQPQVVLRVHGGHGGDGEGNEETFPSAPPSFTGATSDDIGEIGEPEVGVRVQLRPGPLHAVLDVGSSRLGGQAAGRQR 80

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BLAST of mRNA_C-linearis_contig101.759.1 vs. uniprot
Match: A0A852K9N4_UROIN (RN128 ligase (Fragment) n=1 Tax=Urocolius indicus TaxID=458196 RepID=A0A852K9N4_UROIN)

HSP 1 Score: 76.6 bits (187), Expect = 3.640e-11
Identity = 28/50 (56.00%), Postives = 42/50 (84.00%), Query Frame = 2

Query:  728 PVGQICVICMEPFKPNEVLEVLLCQHLYHERCINRWLGDHTSCCVCKADM 877
            P G++CV+C+EPF+P EV+ VL C+HL+H+RCI+RWL +H +C +CK D+
Sbjct:  246 PDGEMCVVCLEPFQPKEVVRVLTCKHLFHQRCIDRWLLEHRTCPLCKWDI 295

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BLAST of mRNA_C-linearis_contig101.759.1 vs. uniprot
Match: UPI000523D8FD (E3 ubiquitin-protein ligase RNF128 n=1 Tax=Chaetura pelagica TaxID=8897 RepID=UPI000523D8FD)

HSP 1 Score: 73.6 bits (179), Expect = 9.170e-10
Identity = 26/50 (52.00%), Postives = 38/50 (76.00%), Query Frame = 2

Query:  728 PVGQICVICMEPFKPNEVLEVLLCQHLYHERCINRWLGDHTSCCVCKADM 877
            P G  CV+C+EP+KPNEV+ +L C HL+H+ CI+ WL +H +C +CK D+
Sbjct:  245 PDGDCCVVCIEPYKPNEVVRILTCNHLFHKNCIDPWLLEHRTCPICKCDI 294

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BLAST of mRNA_C-linearis_contig101.759.1 vs. uniprot
Match: A0A7K4JQT1_GEOCA (RN128 ligase (Fragment) n=1 Tax=Geococcyx californianus TaxID=8947 RepID=A0A7K4JQT1_GEOCA)

HSP 1 Score: 72.8 bits (177), Expect = 9.190e-10
Identity = 26/50 (52.00%), Postives = 38/50 (76.00%), Query Frame = 2

Query:  728 PVGQICVICMEPFKPNEVLEVLLCQHLYHERCINRWLGDHTSCCVCKADM 877
            P G  CV+C+EP+KPNEV+ +L C HL+H+ CI+ WL +H +C +CK D+
Sbjct:  213 PDGDCCVVCIEPYKPNEVVRILTCNHLFHKNCIDPWLLEHRTCPMCKCDI 262

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BLAST of mRNA_C-linearis_contig101.759.1 vs. uniprot
Match: UPI000523286B (E3 ubiquitin-protein ligase RNF128-like n=1 Tax=Nestor notabilis TaxID=176057 RepID=UPI000523286B)

HSP 1 Score: 68.6 bits (166), Expect = 1.330e-9
Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 2

Query:  728 PVGQICVICMEPFKPNEVLEVLLCQHLYHERCINRWLGDHTSCCVCKADM 877
            P G  CV+C+E +KPNEV+ +L C HL+H+ CI+ WL +H +C +CK D+
Sbjct:    4 PDGDSCVVCIELYKPNEVVRILTCNHLFHKNCIDPWLLEHRTCPMCKCDI 53

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BLAST of mRNA_C-linearis_contig101.759.1 vs. uniprot
Match: A0A850WWU2_PIACA (RN128 ligase (Fragment) n=3 Tax=Cuculiformes TaxID=8940 RepID=A0A850WWU2_PIACA)

HSP 1 Score: 72.8 bits (177), Expect = 1.620e-9
Identity = 26/50 (52.00%), Postives = 38/50 (76.00%), Query Frame = 2

Query:  728 PVGQICVICMEPFKPNEVLEVLLCQHLYHERCINRWLGDHTSCCVCKADM 877
            P G  CV+C+EP+KPNEV+ +L C HL+H+ CI+ WL +H +C +CK D+
Sbjct:  246 PDGDCCVVCIEPYKPNEVVRILTCNHLFHKNCIDPWLLEHRTCPMCKCDI 295

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BLAST of mRNA_C-linearis_contig101.759.1 vs. uniprot
Match: A0A1V4KYX3_PATFA (E3 ubiquitin-protein ligase RNF128 n=1 Tax=Patagioenas fasciata monilis TaxID=372326 RepID=A0A1V4KYX3_PATFA)

HSP 1 Score: 70.9 bits (172), Expect = 2.090e-9
Identity = 25/48 (52.08%), Postives = 37/48 (77.08%), Query Frame = 2

Query:  734 GQICVICMEPFKPNEVLEVLLCQHLYHERCINRWLGDHTSCCVCKADM 877
            G  CV+C+EP+KPNEV+ +L C HL+H+ CI+ WL +H +C +CK D+
Sbjct:  117 GDSCVVCIEPYKPNEVVRILTCNHLFHKNCIDPWLLEHRTCPMCKCDI 164

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig101.759.1 vs. uniprot

BLAST of mRNA_C-linearis_contig101.759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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Match Name	E-value	Identity	Description
A0A6H5KGG6_9PHAE	3.550e-88	36.11	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
D7G9G3_ECTSI	2.750e-35	48.54	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G9G1_ECTSI	2.550e-29	37.73	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G9G2_ECTSI	3.860e-13	51.25	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A852K9N4_UROIN	3.640e-11	56.00	RN128 ligase (Fragment) n=1 Tax=Urocolius indicus ...	[more]
UPI000523D8FD	9.170e-10	52.00	E3 ubiquitin-protein ligase RNF128 n=1 Tax=Chaetur...	[more]
A0A7K4JQT1_GEOCA	9.190e-10	52.00	RN128 ligase (Fragment) n=1 Tax=Geococcyx californ...	[more]
UPI000523286B	1.330e-9	50.00	E3 ubiquitin-protein ligase RNF128-like n=1 Tax=Ne...	[more]
A0A850WWU2_PIACA	1.620e-9	52.00	RN128 ligase (Fragment) n=3 Tax=Cuculiformes TaxID...	[more]
A0A1V4KYX3_PATFA	2.090e-9	52.08	E3 ubiquitin-protein ligase RNF128 n=1 Tax=Patagio...	[more]

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