Homology
BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match:
D7FJI8_ECTSI (TCTP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJI8_ECTSI)
HSP 1 Score: 323 bits (827), Expect = 1.190e-110
Identity = 161/176 (91.48%), Postives = 171/176 (97.16%), Query Frame = 1
Query: 91 MIVYKDLISGDEMMTDAFPQNPVVC-DGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKVNNVIDPFKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
MIVYKDLISGDEMMTDAFPQNPVV DGET+EGMFEVES+T +KGSDNVDIGCGNAFGG+EE VDDSVEKVNNVIDPFKYTEVPFGSK+ELK+YLK+YVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLL KFADMQTFAGESMTAEGGMAFGYYK+GAHNPTFAYISKA++AEK
Sbjct: 1 MIVYKDLISGDEMMTDAFPQNPVVGNDGETVEGMFEVESSTAVKGSDNVDIGCGNAFGGEEEVVDDSVEKVNNVIDPFKYTEVPFGSKTELKDYLKEYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLSKFADMQTFAGESMTAEGGMAFGYYKDGAHNPTFAYISKAMEAEK 176
BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match:
A0A835YS00_9STRA (Mss4-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS00_9STRA)
HSP 1 Score: 214 bits (544), Expect = 1.480e-67
Identity = 109/178 (61.24%), Postives = 132/178 (74.16%), Query Frame = 1
Query: 91 MIVYKDLISGDEMMTDAFPQNPVVCD-GETIEGMFEVESATTIKGSDNVDIGCGNAFGG--DEEAVDDSVEKVNNVIDPFKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
MIVY D+++GDEMMTDAF + PV+ D G +EG+FEVES +KGS VDIGCGN+FGG D+EAVDD+VEKVNNVID F ++E PFGSK+E KEYLK+YV +R KE G PQPEIK FMA APG+VKFLL K+ D+Q + G S +G M+F YYKEGA P F +I L EK
Sbjct: 1 MIVYTDMVTGDEMMTDAFKKLPVLDDEGNPVEGLFEVESQVIVKGSTEVDIGCGNSFGGGGDDEAVDDAVEKVNNVIDSFNFSECPFGSKTEFKEYLKEYVVKLRGMFKEAGKPQPEIKAFMATAPGIVKFLLSKYNDLQFYVGASYDPQGAMSFSYYKEGATTPNFMFIEGGLKVEK 178
BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match:
H6WBA0_VAULI (TCTP domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA0_VAULI)
HSP 1 Score: 209 bits (531), Expect = 4.050e-65
Identity = 109/179 (60.89%), Postives = 128/179 (71.51%), Query Frame = 1
Query: 91 MIVYKDLISGDEMMTDAFPQNPVV-CDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGD--EEAVDDSVEKVNNVIDPFKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEKV 618
MIVY DLISGDEMMTDAF PV+ GE +EG+FEVES +KG DNVDIGCGN+FGG +E VDDSVEKVNN+I F +E PFGS++E KEYLK+YV+ VR LK+ GTPQP+IK FMA AP MVKFLL + + Q + G S G MAF YYKEGA P+F +I L KV
Sbjct: 1 MIVYADLISGDEMMTDAFKIKPVMNSKGEKVEGLFEVESEIIVKGGDNVDIGCGNSFGGGGADEIVDDSVEKVNNIISSFNLSECPFGSRNEFKEYLKEYVKKVRTALKDSGTPQPQIKAFMAIAPDMVKFLLENYKEYQFYTGSSYDPSGAMAFAYYKEGALTPSFVFIEAGLKVTKV 179
BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match:
A0A4V8H021_9STRA (NoTCTP n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4V8H021_9STRA)
HSP 1 Score: 175 bits (444), Expect = 2.870e-52
Identity = 90/179 (50.28%), Postives = 119/179 (66.48%), Query Frame = 1
Query: 91 MIVYKDLISGDEMMTDAFPQNPVVCDGETIEGMFEVESATTIKGSDNVDIGCGNAFGG--DEEAVDDSVEKVNNVIDP--FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
MIVYKD+ISGDE+++DA PV+ GE + G+FEV+SA G ++DIGCGNAFGG D+E DD+ +K NNV P F YT +PF SK E K ++KDYVR+VR LK G +IK+FM +AP VK+L+ K+ D++ F +SM + G+ F YYKEGAH PTF Y+ K
Sbjct: 1 MIVYKDVISGDEVVSDALKITPVMEGGEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPSSFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVK 179
BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match:
A0A225VK44_9STRA (TCTP domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225VK44_9STRA)
HSP 1 Score: 157 bits (398), Expect = 2.030e-45
Identity = 86/179 (48.04%), Postives = 114/179 (63.69%), Query Frame = 1
Query: 91 MIVYKDLISGDEMMTDAFPQNPVV-CDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKVNNVIDP---FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
M+V++D+ + DE+M+D+F P +G + GMF+VES T KG+DNVDIGCG+AFGG+EEAVDDSVE VNNVID F Y E F +K+ELK YLK + R V LK + +F + A +VKFL+ F ++Q + +S +E GMA+ YY EGA PTF YI L K
Sbjct: 1 MLVWQDIFTEDEVMSDSFKVVPCKDLEGNEVSGMFQVESKTVAKGADNVDIGCGDAFGGEEEAVDDSVETVNNVIDESVGFGYNETGFDTKAELKTYLKSFFRKVMKNLKSSDASDETLAQFKSDAQEIVKFLVSMFKELQFYMFKSFDSEAGMAYAYYPEGAIAPTFCYIKWGLKEVK 179
BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match:
A0A6V1UMP4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UMP4_HETAK)
HSP 1 Score: 156 bits (395), Expect = 1.590e-44
Identity = 85/180 (47.22%), Postives = 116/180 (64.44%), Query Frame = 1
Query: 91 MIVYKDLISGDEMMTDAFPQNPVVC-DGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAV-DDSVEKVNNVIDP---FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
M+VYK + + DE+M+D++ +V DGE + G+F VES G ++DIGCGNAFGGD++A DD VEK NN+I F TE+PF SK+E K +LKDYVR VR+++K G PQ EIK+ M +AP VK+LL +++++Q + G SM EG M F + PTF YI L EK
Sbjct: 34 MLVYKCMFTDDELMSDSYKIKDIVDEDGEVVPGLFGVESKIVAVGGGDIDIGCGNAFGGDDDAGGDDGVEKENNIISESAGFGLTEMPFNSKAEFKAFLKDYVRKVRSEMKSNGVPQEEIKQMMNEAPIFVKYLLSQYSELQFYVGRSMDPEGTMIFARFYGEDLTPTFVYIKAGLKQEK 213
BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match:
M4C5S4_HYAAE (TCTP domain-containing protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=M4C5S4_HYAAE)
HSP 1 Score: 150 bits (380), Expect = 1.060e-42
Identity = 83/179 (46.37%), Postives = 112/179 (62.57%), Query Frame = 1
Query: 91 MIVYKDLISGDEMMTDAFPQNPVV-CDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKVNNVIDP---FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
M+V++D+ + DE+M+D+ +P +G + GMF+VES T KG+DNVDIGCG+AFGGD+E VDDSVE VNNVID F Y E F +K+ELK YLK Y R LK + +F + A +VKFL+ F ++Q + +S +E G+A+ YY EGA PTF YI L K
Sbjct: 1 MLVWQDVFTEDEVMSDSHKVSPCKDMEGNAVPGMFQVESKTVAKGADNVDIGCGDAFGGDDEQVDDSVETVNNVIDDSIGFGYIETGFDTKAELKTYLKSYFRKTMKHLKATEAGDEALAQFKSDAQEIVKFLVSMFKELQYYMFKSCDSEAGLAYAYYPEGAVAPTFCYIKWGLKEVK 179
BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match:
A0A484DX33_BRELC (TCTP domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DX33_BRELC)
HSP 1 Score: 149 bits (376), Expect = 4.260e-42
Identity = 81/179 (45.25%), Postives = 111/179 (62.01%), Query Frame = 1
Query: 91 MIVYKDLISGDEMMTDAFPQNPVV-CDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKVNNVIDP---FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
M+V++D+ + DE+M+D+ P +G I GMF+VES KG+DNVDIGCG+AFGGD+ VDDSVE VNN+ID F Y E F +++ELK YLK Y R + LK G + + F AP +VK+L+ F ++Q + +S +E G+A+ YY EGA PTF YI L K
Sbjct: 1 MLVWQDVFTEDEVMSDSNKVIPCKDMEGNEISGMFQVESKMVAKGADNVDIGCGDAFGGDDAQVDDSVETVNNIIDDSIGFGYIETGFETRAELKTYLKSYFRKIMKHLKSTGVDEETLNRFKTDAPEIVKYLVSMFKELQFYMFKSCDSEAGLAYAYYPEGALAPTFCYIKWGLKEVK 179
BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match:
A0A421GT19_9STRA (TCTP domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A421GT19_9STRA)
HSP 1 Score: 149 bits (377), Expect = 4.420e-42
Identity = 80/175 (45.71%), Postives = 111/175 (63.43%), Query Frame = 1
Query: 91 MIVYKDLISGDEMMTDAFPQNPVV-CDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKVNNVIDP---FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKAL 603
M+V++D+ + DE+M+D+ P +G + GMF+VES T KGSDNVDIGCG+AFGG++EAVDDSVE VNNV+D F Y E F +K+ELK YLK Y R LK + +F + A +VK+L+ F ++Q + +S +E G+A+ +Y EGA PTF YI L
Sbjct: 1 MLVWQDVFTEDEVMSDSLKVTPCKDMEGNEVSGMFQVESRTVAKGSDNVDIGCGDAFGGEDEAVDDSVETVNNVVDDSVGFGYVETGFDTKAELKTYLKSYFRKTMKHLKATDASDETLAQFKSDAQEIVKYLVSMFKELQFYMYKSCDSEAGLAYAWYPEGALAPTFCYIKWGL 175
BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match:
H3GH26_PHYRM (TCTP domain-containing protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=H3GH26_PHYRM)
HSP 1 Score: 147 bits (371), Expect = 2.420e-41
Identity = 81/179 (45.25%), Postives = 110/179 (61.45%), Query Frame = 1
Query: 91 MIVYKDLISGDEMMTDAFPQNPVV-CDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKVNNVIDP---FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
M+V++D+ + DE+M+D+ P +G + GMF+VES T KGSDNVDIGCG+AFGGD+E VDDSVE VN+VID F Y E F +K+ELK YLK Y R LK ++ +F A +VKFL+ F ++Q + +S +E G+A+ YY +GA P F YI L K
Sbjct: 1 MLVWQDVFTEDEVMSDSNKVTPCKDMEGNLVSGMFQVESKTVAKGSDNVDIGCGDAFGGDDEQVDDSVETVNSVIDDTVGFGYIETGFDTKAELKTYLKSYFRKTMKHLKATNASDEDLAQFKTDAQEIVKFLVSMFKELQFYMFKSCDSEAGLAYAYYPDGAVAPIFCYIKWGLKEVK 179
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.19e-110 / Id = 91.48 Expect = 1.48e-67 / Id = 61.24 Expect = 4.05e-65 / Id = 60.89 Expect = 2.87e-52 / Id = 50.28 Expect = 2.03e-45 / Id = 48.04 Expect = 1.59e-44 / Id = 47.22 Expect = 1.06e-42 / Id = 46.37 Expect = 4.26e-42 / Id = 45.25 Expect = 4.42e-42 / Id = 45.71 Expect = 2.42e-41 / Id = 45.25 Sequence D7FJI8_ECTSI A0A835YS00_9STRA H6WBA0_VAULI A0A4V8H021_9STRA A0A225VK44_9STRA A0A6V1UMP4_HETAK M4C5S4_HYAAE A0A484DX33_BRELC A0A421GT19_9STRA H3GH26_PHYRM Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 324.3 Seed ortholog evalue 4.1e-86 Seed eggNOG ortholog 2880.D7FJI8 Preferred name TPT1 KEGG ko ko:K20301 Hectar predicted targeting category other localisation GOs GO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000909,GO:0001932,GO:0001934,GO:0002181,GO:0003006,GO:0003674,GO:0005085,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005737,GO:0005739,GO:0005768,GO:0005770,GO:0005771,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006970,GO:0006974,GO:0006979,GO:0007049,GO:0007093,GO:0007095,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0008017,GO:0008092,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008361,GO:0009058,GO:0009059,GO:0009314,GO:0009605,GO:0009607,GO:0009615,GO:0009628,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010212,GO:0010332,GO:0010389,GO:0010467,GO:0010494,GO:0010562,GO:0010564,GO:0010604,GO:0010638,GO:0010646,GO:0010648,GO:0010941,GO:0010948,GO:0010972,GO:0012505,GO:0015631,GO:0016043,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019827,GO:0019899,GO:0019953,GO:0022402,GO:0022414,GO:0022603,GO:0023051,GO:0023057,GO:0030001,GO:0030003,GO:0030154,GO:0030234,GO:0030582,GO:0030584,GO:0031012,GO:0031056,GO:0031058,GO:0031155,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031410,GO:0031570,GO:0031572,GO:0031573,GO:0031974,GO:0031981,GO:0031982,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032991,GO:0033043,GO:0033044,GO:0033127,GO:0033129,GO:0033554,GO:0034305,GO:0034599,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0040008,GO:0040014,GO:0040018,GO:0042173,GO:0042174,GO:0042221,GO:0042325,GO:0042327,GO:0042592,GO:0042981,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043900,GO:0043902,GO:0043937,GO:0043939,GO:0043943,GO:0043944,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0044818,GO:0045595,GO:0045596,GO:0045786,GO:0045793,GO:0045927,GO:0045930,GO:0045937,GO:0046483,GO:0046872,GO:0048232,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051020,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060255,GO:0060548,GO:0061458,GO:0062039,GO:0062040,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070796,GO:0070798,GO:0070838,GO:0070887,GO:0071214,GO:0071470,GO:0071478,GO:0071479,GO:0071480,GO:0071704,GO:0071840,GO:0072503,GO:0072507,GO:0072511,GO:0075259,GO:0075260,GO:0075261,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090304,GO:0097708,GO:0098727,GO:0098771,GO:0098772,GO:0104004,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902058,GO:1902060,GO:1902229,GO:1902230,GO:1902275,GO:1902531,GO:1902532,GO:1902749,GO:1902750,GO:1903047,GO:1903664,GO:1903665,GO:1905269,GO:1990624,GO:1990904,GO:2000026,GO:2000241,GO:2000243,GO:2000383,GO:2000384,GO:2000736,GO:2001020,GO:2001021,GO:2001233,GO:2001234,GO:2001242,GO:2001243,GO:2001252 EggNOG free text desc. microtubule binding EggNOG OGs KOG1727@1,KOG1727@2759 Ec32 ortholog description Mss4-like Ec32 ortholog Ec-04_006280.1 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko04131 Exons 5 Model size 628 Cds size 627 Stop 1 Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927364.6186454-CDS-C-linearis_contig101:368132..368289 1622927364.6186454-CDS-C-linearis_contig101:368132..368289 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 368133..368289 - 1690879654.908685-CDS-C-linearis_contig101:368132..368289 1690879654.908685-CDS-C-linearis_contig101:368132..368289 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 368133..368289 - 1622927364.6292555-CDS-C-linearis_contig101:369537..369632 1622927364.6292555-CDS-C-linearis_contig101:369537..369632 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 369538..369632 - 1690879654.9217997-CDS-C-linearis_contig101:369537..369632 1690879654.9217997-CDS-C-linearis_contig101:369537..369632 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 369538..369632 - 1622927364.6384509-CDS-C-linearis_contig101:369856..369934 1622927364.6384509-CDS-C-linearis_contig101:369856..369934 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 369857..369934 - 1690879654.9311514-CDS-C-linearis_contig101:369856..369934 1690879654.9311514-CDS-C-linearis_contig101:369856..369934 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 369857..369934 - 1622927364.6470933-CDS-C-linearis_contig101:370612..370714 1622927364.6470933-CDS-C-linearis_contig101:370612..370714 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 370613..370714 - 1690879654.9409516-CDS-C-linearis_contig101:370612..370714 1690879654.9409516-CDS-C-linearis_contig101:370612..370714 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 370613..370714 - 1622927364.656584-CDS-C-linearis_contig101:375716..375911 1622927364.656584-CDS-C-linearis_contig101:375716..375911 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 375717..375911 - 1690879654.9551494-CDS-C-linearis_contig101:375716..375911 1690879654.9551494-CDS-C-linearis_contig101:375716..375911 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 375717..375911 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.744.1
>prot_C-linearis_contig101.744.1 ID=prot_C-linearis_contig101.744.1|Name=mRNA_C-linearis_contig101.744.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=209bp
VCVSLVASAPHSSLRPAPSLRHFRPTSTNIMIVYKDLISGDEMMTDAFPQ back to top mRNA from alignment at C-linearis_contig101:368133..375911-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig101.744.1 ID=mRNA_C-linearis_contig101.744.1|Name=mRNA_C-linearis_contig101.744.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7779bp|location=Sequence derived from alignment at C-linearis_contig101:368133..375911- (Chordaria linearis ClinC8C monoicous)GTGTGTGTTTCGTTGGTTGCCTCCGCCCCACACAGCAGCCTCCGCCCCGC
ACCCTCCCTTCGCCATTTCCGCCCCACCTCAACAAATATCATGATTGTCT
ACAAAGACTTGATCAGCGGCGATGAGATGATGACGGATGCTTTCCCTCAA
AACCCGGTTGTCTGTGATGGGGAGACGATCGAGGGGATGTTCGAG GTGTG
TACATACGTGTGTGTGCGTGTTTATGTCAGGGCCCATAATTTGTAGCGAT
ATCTCGTATGAAACCATGTGACAGAATCACGATAATCTTGGTATAGCGCC
GGCACTCTTTGCCAGTGGGTGCCCTTGTCGAAGGAACGCGTTGAAATATT
TTCTGGTGAGCTACATCCGATCAACATGTCCATCGAGGCTTGTGACAACC
ACCACCGCGAGTGGGTAGCGCGCGTGACACCAGGAGTGTTTCTCCCTGTT
CCCGCCCTCATGTCTTTCTATGTGGCGGCTTCGGCGTGGCTCGTTTGCCA
CCAAAATGATTGGTGGTCGGTGGGTAACGTTATTTTACCTCGTACGAGCC
GGTCGCCCTGGTGGTCTAAATAGTGGTCTCACCGCAACCATCTAGTATGC
ATGTTCACGGGTTCGAATCCCGGCGCAAGCGACTTCTTAAAGCATAAAAA
AAAAAAACTCCCCTTCAAGAGACAGATCCCCAAGTGGTGGATTAACAGTT
CTATACAGCAGTAGTGACGTAATGTGGGATAGGTGGAGAAGAACAACACC
TACGGCGGCATCCGTGATAAAGACGAATGTATTTCAGTATTTCACGAGTT
TTCCGTAACACACCACGAAACTTGGGTCCTGAGCTCTGAAAATTTGCACA
CACTTTGGTAGGCCACGTGTGTGTGTTTTCGTCCCATTTATTTTGGCGAC
AGTCCCTTTCTGATCAAGGCGAGACGTGTACTACACGTTGCGGTGTATTT
AGAGTACTACACTTGTTCAGTGTATTTTTCTGTACAACCAGAACCAACCG
GGGTCACACAGGAGGGGGTAAACACTGGGGCTTTTTTCTTCTTTTTTTGT
TTCTTTTTTGCCCCACCTTCCTCCTGCGGTGCTTGCCTTGGATTTTATCG
CCAGAAGGGTGCAGCCATCCCTTTCCCTTGTCAACGTGCTAAGTCGAAGT
TTGGTACTCACGAGCTTTTTCAGCTATGTTATCGCTTTCACCTGCAAAGT
CGCAAAATAATCACCTTCGCTTGGAATTGAACTCCAGACTTTGCTGCTAT
CGAGGTTATACCACTAGTCCACCGGGGCGACCGGCGTGGATCACGAAAAT
ACCATATTTTAAGATTTTTTATTACTGCTGTACTTTTATGATTTTTTATT
ATTTGGTGATCATGGTGATGAGTTAATCGTGAATAGCTCATCACCATGAT
CACCGGGTTAAAACAGCAGGCATGTGAAAAACAGCGGTTCAGCCCTGTAA
CTTACCGGTTATAGCCGAGCCTACAGCCGGTCGCCCCGGTGGACTAGTGG
TTTAACCTCGAACCCACTAGCAGCAAAGTCTGGAGTTCAATTCCAAGCAA
AGGTGATTATTTTGCGACTTTGCAGGTGAAAGCGATAACATAGCTGAAAA
AGCTCGTGAGTACCAAACTTCGACTTAGCACGTTGACGAGGGAAAGGGAT
GGCTGCACCCTTCTCGCGACAAAATCCAAGGCAAGCACCGCAGGAGGAAG
GTGGGGCAAAAACGGAACAGAAAAAGAAGAAAAAAGCCCCAGTGTGTACC
CCCTCCTGTGTGACCGCCATTGGTTCTAGTTGTACAGAAAAATACACTGA
ACAAGTGTAGTACTCTAAATACACCGCAACGTGTAGTACACGTCTCGCCT
TGATCAGAAAGGGACTGTCGCCAAAATAAATGGGACGAAAACACACACAC
ACACACCGGGGACGAAACCCATCCCAGGGGTGTTAAACAACGTAATAGCG
TTCGTTTGAAAAGGCTCTCGAGCTCTCGAGACGTGCTGTATTGCTGTATG
ATATTGCGGTTCTCTGGGTGCTGTCACTGTGCTGTTGCTGTATGTTTATA
TGTTTATCGCGTATGCTCTCTGCCCTGTTAAAATGTTACAATGAATTCTA
ATTTTGGTTGTGATACATGGTACCTCCGGAGACCAAAAATAAAAAATGAA
CATGACTGATGGTTCATGAGTCTTGATCGTGTAGGGCCATTCTTATCGAA
CAAGTTTTTTCACGGATTCGTGAATTCTTGAATTTATTTTCCTCGAATCC
GAGGAAAACAAGGGCGGCGAAAAAAACGCGGCTGTTCAATTCAAGAATCC
GAGGAAACAGAGGAGGGATCGGGCAGACGCGGTAGGAGGGCTGCTCTTAC
GTACAGAAGTGTGCAAAACGTGTCCCAACCCCTCAGAGGATCAGTCACAG
GCCGCTACCGACAAAAATGTCACGAGTCGATGGTTTTGCTGTTGTTGTGG
GATGAGTTGCTCTGTGCCCGCCAAAGCGACCGAAAGTCCAACACGATGAT
CAACTTCACGATATCACCTCTCATAGGGCATGCCAGAGGATAATTCCTTC
TGTCGGAAACAGCTAGCCAATCGTACTATCGGCGAATAGTGTGCAACCTA
TTGCTTGAGTCCTTCGGTCAGGCTAGACGAGAGGGTAGTCGCAATAGCAG
AGGACCAGAGGGGATATGCGATAAGAACGCGGCGGAATTTTTCACGAATC
CGTGATTTTTTTTGCTCGATAAGAACCGCCCTTAGTGTCCTAAGTTGTAG
TAGAAAATAACAAACACTTAAAAGCTTCGAAAAAATGAGTATGAGAAATA
AACACTAGACTATTATTGTGCTACTCTACTGACTCCCCCAACAGATCGCA
GATCGCATGCAAATGCGTGTGGCGAAAAATAAAAACAAAGTAAAACAATA
AAAAAGAAAGAAGGAAAAGAAAGAAAACCTTTTCGACACTTCACGCTTCA
CCGCCCATTACGCAGCTCTCGAAATCTTGCTCCATCAAGCAAAAAATAGT
AAATCTGCCCGCGAATAAGGTCAACATCTAACTCCTGCTGCCTCTGAAAG
CGACGGAACATCGAGGGCCCAAACAAATCAACAAATCTAGTGCTCGACCC
CCTCGAGAATTTCAGGTTCAGCCGAGAGTGCGGGCCCCAGAGACCCCCAA
GAGGCAAATGACATAGTCTGCTGTCGGCTGTGTGTGTCGGTGAATTGGGA
AGAGAGAGAAAAATAAGGGGCCCCGCACTGGCAAAAGGAGGGGGGCGCCA
AAGGGGCCCCGGAAACTGAGAAAATAACCGGGAATTTCCATGTAACTTAC
AGCGAAAGTGAGAACCGGTTAAAACCGGTTAGCGGTTTTTCACATCACTG
CTGTAAAATAGTCGGTAAATCGCCTCGGCGGGCCCCCCAAGGAAAATTCC
AACCCCTCCGAATCGATTGAAAATTTCAGGGATCCTAGGTATGTGTGTGT
GTGTCTTCGTCCCATTTATTTTGGCGACAGTCCCTTTCCGATCAAGGCGA
GACGTGTACTACACGTTGCGGTGTATTTAGAGTACTACACTTGTTCAGTT
TATTTTTCTGTACAACTAGAACCAATGGCGGTCACACAGGAGGGGGGGCT
TTTTTCTTCTTTTTCTGTTCCTTTTTTGCCCCACCTTCCTCCTGCGGTGC
TTGCCTTGGATTTTGTCCCGAGAAGGGTGCAGCCATCCCTTTCCCTCGTC
AACGTGCTAAGTCGAGGTTTGGTACTCACGAGCTTTTTCAGCTATGTTAT
CGCTTTCACCTGCAAAGTCGCAAAATAATCACCGTTGCTTGGAATTGAAC
TCCAGACTTTCCTGCTAGTGGGTTCGAGGTTAAACCACTAGTCCACCGGG
GCGACCGGCATACCACCGGTAAACACGTGTCCGAAGTTAGAAATTGGAAA
AAAGCATTTCTGCGCTACTTCTTTCCCTCAGAAGGAAAGCAAGAAATCGG
AGACAAATTGGGATTATACCAGGATTACACTGAAATATCCCCTCCCGTGG
TACACGTTCCACATGTTGATTCAAGTCCTGCAGACATCACTGATGTGTAA
TTTTGGGTCGGGGGTCACGAATACATCATAAGAATACCCTAGATCGGCAA
TGCAATCGACTTATAAAGGGTGTACAAATGCTTGGCTTTCGTGAGCCTTT
CAAGATTCTCTGAAAAATTTGAAATTTAGATCCTGCCACCAGGTTTGGTC
GGAGCAACTTTCTGAGTGGCTCTACCCCCCCCCCAAAATCGGCCAAGCGG
AGTCGATTGGCGCAGTTCCCTTTCAAAAAAAAGTTCGGCAACATGGTGAA
AAAAAAAGTTCGCGGCGAAGATGAACTTTTATCTTTCAGGGAACTTTTTT
AGACGTCGTTTTTGGTCGTTTTGGAACGATACACGAAGTCGATTTTTCAT
TTATGTTTTCGAGGCAGGAGAGGTCATTTAGCTTTAGCGCGGAACCCGCC
CTAGGATGACTTTTTTTTCACACAAATTGAGTTGTTTCTCTCGCTTTCGT
TTATGTCAGTGGAAAGCGCTTGATTCGTGTGTACACTTGAGGGAGAGACG
GCTGAAACTCTCTCGCGGTAAAAACTACCAGGCAAGCACCGCAGAAGGTG
GGTGGGGGCCTCAGGGAGAGGAGCCTTCTGTGTGATCACGGTTCAGATGT
TCTGGCGAGATGCCCCGCGTGCCAAGACGCCCCTGCGAACTCTGGAAATA
AATGAAAAAGACATAAAAAAATAAAAATAAAAAGTTTTCCTGGCACAGCT
CGGGCTGCATCGATCTCCTTTCTCACCAGAAAGGCAAATCAAAGCTATGA
TAGGGTTGGCACTGCTGATCTGGAGCGGGAACACACCCGCCGGGTAGCAG
GGAGAGCATGGATCAACGCTGTTGTTTTCTAGTTATGGGTGTTCGCTTGT
CGCTGCGTGGGTTCTCGGCTTGAACATGAAAGCTATTCCACCCCAAAGAC
CTGTCACTCATGACGCTCCGCAGGCAGGTCGGCAACAGCCGCGTCTCCAC
TTGTGAGGTGAGCGGCTGTTCAGGCAGCCCGCACGAGAACCAAGTCGCCG
CTTGGACTTCTCGGGCATGACATACCGATCAAGATTGCTGCCAAATGCTG
ATCCATGCCGTACTATTATTCACGCGGTCATGCGCTTCCATCTCAAGTAT
TTTTGACTTCCCTCTCCGTTCTCTCGTCTAATTGAACGCCTCTGTAGGTG
GAGTCTGCCACCACCATCAAGGGTTCCGACAACGTTGATATCGGCTGTGG
AAATGCATTCGGTGGTGACGAGGAGGCCGTCGACGATTCCGTAGAGAAG G
TAGGTGGTTATCTTTGTTCCTAGACTGCATGTGTTGGTTGTGTGCACAGG
TGGGGTATCATGCTCCACATGTTTCAGACAACTTGGGAGAGACATGTTCG
AAAGATCACAAGTTTTGTCAGAGACAGCAGTAGTCGCATCTTCCCTGTTT
TTGTACATCGTACACTGAAGACTCCCCGGGAGTCTACCGGGTGGTTCAGC
TCCCTGTGTTTGTGTGTTTTCGTCCCATTTATTTTGGCGACAGTCCCTTT
CCGATCAAGGCGAGACGTGTTCTACGCTTGTTCAGTGTATTTTTCTGCAC
AACTCGAACCAACCGGGGTCACACCGGAGGGGGTAGACACTATCATAGGG
CTTTTTCTTCTTTTTCTGTTTCTTTTTGTTTTTTGCCCCACCTTCCTCCT
GCGGTGCGTGCCTTAATTTTCCTTAATTTTCGTCGCGAGAAGGGTTGAGC
CGTCCGTTTCCCTCGTCAACGGTAACGTCGAAGTTTTTGGTACTCACGAG
CTTTTAGTTATGTATGTTGTCGCTTTCACCTCGCTAATTTGCAAATTTTT
CACCTCGTGGGGATTCGAACTCACGACTTTGGCTGCTAGCTGGTTTCGAG
GTTACCCCGAAACCACCGGGGCGACCGGACGTGTAGACTCGGTTTATGTT
GACTGTACCGAAATCATGAATTCACAGGTGAACAACGTTATCGACCCTTT
CAAGTACACCGAGGTGCCCTTCGGTAGCAAGAGCGAGCTTAAGGAATACC
TCAAG GTGAGTTGAAGGCTTCCTTTGTTGGAACAGGGTAACACCCACGCA
GGAAAATGCCGTCGTGAGCGACGAAGCATGTTGAGTTGTATGAGTAATTA
ATGGAGCGAAGCATACTACGGAACGAACACGAAGAGAGATCTTGGTTGTG
ATGGCTCTTTGACGTCTACTTGAACCCAAGTATGAGTTCACGTCCGCCCC
TCTCCCGGTCGTGGTGGCCTGGCTGATAGGACTACGTGCGGAGTGTACGT
GCTAAGCTGAAGGAGAAGGGAACGCCGCAGCCAGAGATTAAAGAGTTCAT
GGCACAGGCACCAGGCATGGTCAA GTGAGTTTTCAATGTCACGTGGGTTT
TTTAAAGTCAAGACTATTCCTGCGTCTCCACACAGTAGTGTTGCTGCGTC
ATTCTCGACGAATTCAAGCCTTCGACGTGTGTGCACGCATTTGTTGGCCT
GCCGACAGAGAGCAGAGAGACGCCCATGCGGAACCACCGGCCAATATGTG
TATTTTGAGGGTGTGATCGTATACCTGATACTAGCTGGTACTAGTATACG
CTTTCGGCGCGAAGCGAACTGCTGATCTAGATTGCGACGGATGTTGTCTA
CCGATGGACGAATAGGGCTACTGTTCAGCCTCGCGTAATTTACTTAAAAC
TAGTCTACGACCGCTCCGAAAGAAACAATACGGAACGGTCCTGAAAGCAA
GAAGAGTAATGATAGACACAAAACCTCGGGGGCTCCACAACCACTGCTTG
AGCTCACTAGCACCGCGGTAACGAAGCGGCCCCTTGCAAGGCTGCTCGCT
TAGGTTACTCGATATATGCGTGTCCGTGTGAGCTGACAGTGAAACAACCA
TGGTTTTGGCTGAGAGCGGGCAGCGAAGCAGCAGCAGCGCGACGACACAT
GAAGCATTATTACTCTTATTAAACTTCAAATGTTTGCGGTTTTTTCGGAG
CCAACGGGATCACGGGATGTCGTGTTTGGGCGGCTAAAATGGTGGTTATG
TGTTTTGCCGTTTCATGTCATAAACAGACGCTGCCACCAAAGCACGTGCA
TACGCCGCTATTTTATGAATGTGGGTATTGGGACACGAGACGAGTTTACG
GGTCCAAAGGGCTGTAAAGTCGACTTGTTGTTGTTGTCTTCACACTAAAA
AGCCATCCCGTCTCTCTCTACCCAGTACCCCCTTTTGTCCGTACTGATTC
AACAGACACGGCCAATTCCCGTGGTCACAGGTTAACTTACCCTAAAAAGG
TATCTAAAAATAAAATAGTCCCGAAGGGTCAGCAGAGCGATAAAATTAAA
ACAATTAGTCTGGAGCCCTCCGCTCCCCTCTGCACGCTATGCGAGGTAAA
AGTAAAATTGACTGCAGCAGCGAAATGGTTTTGGTGACCACCTCCGAGGT
GCTCTTTGCGACCCCAAAAGGAAGTCCGTGAAGTTGACCGACGGGCTCAA
TCACCAAAACTCACCCATTGCTGGGATGCTCGGTGGCTCTTCATAACCTT
TATGGTATCACTTATCATATCATCTTGGTTGTAACGCTCCTCGGTCTCGA
ATCATCCTACGTGTCTACTCAGGTTCCTTTTGGGTAAATTTGCCGACATG
CAGACGTTTGCAGGCGAATCGATGACGGCGGAGGGGGGAATGGCGTTCGG
TTACTACAAGGAGGGAGCGCACAACCCGACGTTCGCGTACATCAGCAAGG
CTTTGGATGCGGAGAAGGTGCGCGTGTGA back to top Coding sequence (CDS) from alignment at C-linearis_contig101:368133..375911-
>mRNA_C-linearis_contig101.744.1 ID=mRNA_C-linearis_contig101.744.1|Name=mRNA_C-linearis_contig101.744.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1254bp|location=Sequence derived from alignment at C-linearis_contig101:368133..375911- (Chordaria linearis ClinC8C monoicous) back to top