Homology
BLAST of mRNA_C-linearis_contig101.717.1 vs. uniprot
Match:
D8LN78_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN78_ECTSI)
HSP 1 Score: 103 bits (258), Expect = 9.910e-21
Identity = 52/74 (70.27%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 16 WAELAEGVEFEGLSGKVEMDSLGNRKGMDVSFWLVESLTVGGSSYTSGMEAARYHSASGTLQLLRNIHWPGTLS 237
WA LA GV FEGLSGKVEMD LGNR GMDVSF L+E +T G+SY SG EAARY SAS T+QLLR++ WP +LS
Sbjct: 484 WAGLAAGVGFEGLSGKVEMDDLGNRMGMDVSFRLMEGVTADGASYVSGKEAARYDSASETVQLLRHMQWPASLS 557
BLAST of mRNA_C-linearis_contig101.717.1 vs. uniprot
Match:
A0A6H5JK37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK37_9PHAE)
HSP 1 Score: 101 bits (251), Expect = 8.100e-20
Identity = 51/74 (68.92%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 16 WAELAEGVEFEGLSGKVEMDSLGNRKGMDVSFWLVESLTVGGSSYTSGMEAARYHSASGTLQLLRNIHWPGTLS 237
WA LA GV FEGLSGK+EMD LGNRKGMDVSF L+E +T G S+ SG EAARY SAS T+QLLR + WP +LS
Sbjct: 466 WAGLAAGVGFEGLSGKLEMDDLGNRKGMDVSFRLMEGVTAYGISFVSGKEAARYDSASETVQLLRQMQWPASLS 539
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.717.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 9.91e-21 / Id = 70.27 Expect = 8.10e-20 / Id = 68.92 Sequence D8LN78_ECTSI A0A6H5JK37_9PHAE
Match Name E-value Identity Description
D8LN78_ECTSI 9.910e-21 70.27 Tyrosine kinase specific for activated (GTP-bound)... [more] A0A6H5JK37_9PHAE 8.100e-20 68.92 Protein kinase domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 104.0 Seed ortholog evalue 1.4e-19 Seed eggNOG ortholog 2880.D8LN78 KEGG ko ko:K17535 Hectar predicted targeting category other localisation EggNOG free text desc. protein kinase activity EggNOG OGs COG0515@1,KOG0192@2759 EC 2.7.11.1 COG Functional cat. KLT Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko01000,ko01001 Exons 3 Model size 1001 Cds size 999 Stop 0 Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927358.5296288-CDS-C-linearis_contig101:100034..100097 1622927358.5296288-CDS-C-linearis_contig101:100034..100097 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 100035..100097 + 1690879650.902339-CDS-C-linearis_contig101:100034..100097 1690879650.902339-CDS-C-linearis_contig101:100034..100097 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 100035..100097 + 1622927358.5422952-CDS-C-linearis_contig101:100399..100537 1622927358.5422952-CDS-C-linearis_contig101:100399..100537 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 100400..100537 + 1690879650.9145358-CDS-C-linearis_contig101:100399..100537 1690879650.9145358-CDS-C-linearis_contig101:100399..100537 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 100400..100537 + 1622927358.5553749-CDS-C-linearis_contig101:101173..101971 1622927358.5553749-CDS-C-linearis_contig101:101173..101971 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 101174..101971 + 1690879650.9263852-CDS-C-linearis_contig101:101173..101971 1690879650.9263852-CDS-C-linearis_contig101:101173..101971 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 101174..101971 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.717.1
>prot_C-linearis_contig101.717.1 ID=prot_C-linearis_contig101.717.1|Name=mRNA_C-linearis_contig101.717.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=333bp
GGRVRWAELAEGVEFEGLSGKVEMDSLGNRKGMDVSFWLVESLTVGGSSY back to top mRNA from alignment at C-linearis_contig101:100035..101971+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig101.717.1 ID=mRNA_C-linearis_contig101.717.1|Name=mRNA_C-linearis_contig101.717.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1937bp|location=Sequence derived from alignment at C-linearis_contig101:100035..101971+ (Chordaria linearis ClinC8C monoicous)GGCGGGCGTGTTCGGTGGGCGGAACTGGCGGAAGGCGTTGAGTTCGAGGG
TCTCTCCGGCAAG GTATACCTAGGGTTTCTGTTGTTTGTTTTTCGTGCGT
GTTTGCCTGCTTTTGTTTGCTTGCTTGCTTTCCTGCACCTGAAACGATAG
ACGGGTGGTGGAGCGGGCGCGGGTTCGGGCGGGTCACGTGAGAGGTGCCG
ATTCGAACATGGTGTGGGCGCGCGGGGCCCGGTGATTGACTGGCTCATCG
ATGGGAGCGCCCCACCACACCATGTCTATGATAACTCTGGTTGGCCCTCG
GTTCCGCCTTCCAACCCCCCAATAAGTAGATGATGCGATGTGCGATCCAA
TATGACGACAATTAGGTCGAGATGGACAGTCTGGGGAACCGCAAGGGGAT
GGATGTGTCCTTCTGGTTGGTCGAGAGCCTCACCGTGGGTGGGAGCTCGT
ACACGTCGGGAATGGAGGCGGCGAGGTACCACTCCGCTTCAGGGACTCTG
CAG GTATGTATGCAGGTGGTTTCGTTGTCTGCACGTGCACACCCGCGTTG
ACTGGCGTCTTCGTTTGTTGTTGCACGGCCGCGCTCGTCAGCTGAACCAA
CGGCAGCAGTGCGTAAGTTGAACATTCGAGATCGACAACTGCTGCGAAAA
AAACGACAAACCAAAATCTGGGGCCGTTTTGGGTTGCTGCCGGGGTTATG
TATGTTCTCAGGACGTTGATGGCTGCCTTTTAGAGTCGGTTCTGATGGTA
CTTGTCGAGCATACTGTACTGTTGTACTCTGGTCAGTTGGCTCCGGCCAA
AGTTGAAGGCACGCCTGCGCCCTTTCCTCGACCGTGGTTGAGGGCCGGTT
TTCTGCCCCCCCCCCAAAAAAAAAACATGTTTTCCTTCTCGTTCGTACAG
TATGGCCTCGGTTTTTCCCCGCCTTTCGGGCGGATTCCTCTCGGGGCGGA
ATCTAGAATGGCTGCGTGTTGTACTGGCGGTGTGTGGGCAACGATTCGAA
CTGTCTGTCGTATGTTGCTATTAAAGAAACGCAACTTCTTGAAGTAACAC
ACACCAACCCGCCCCCACCCGCCCAAACAACAAACCACGCCAAACGCCAC
CACCACCACCACCATCACCACCATCACCACTGTCAACAGCTGCTGCGAAA
CATCCACTGGCCCGGGACGCTGTCGTACGGCGATCGGCGAGCGGCGGTGG
TTCCCTTACCACAGCCGATGAGAGGTACTAGGAGAACAGGCAAGGGTGCC
GGTGCCGGTGCTGGTGAAGGCGGCACCAGGACCATCGTGGAAGGGTGGAT
CGACGGTCTGATGTTCGCGCTCGACCGCCTCCTCACCACACCAGCGTCCG
GCGCTGTGCTGCTCAGGTTAGCCGCGCTGGGGGCCCTGGTTGTAGCCGTG
GGGGTGAAGCTCAAGCTTTTGGGGGCAGCGGACGCGGAGAAGTCGGCGGG
GGTGAAGGCAGCAGTGGCGCTGGCGGCGGCGAGAGTCGCAGCAGAGCGAA
GGGTAGAGAACGGCAGGGAGGGTGATGGCGGCAGCGCCGAAGACGCGGCC
CCTCCTCCTTCTCGCACAGCCGCGCCAAGGGTGGCGAGGGCGACAAGACG
TGGCGTTTCGCAGCAGGAGCTTCTTCCTGCTGCACCCCGTCCTCTTCCTC
TTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCGCCGCAG
TCCCCTCGGACGCTGACGTTTGAGCAAGAGAGTCACACTCATCTGACGGT
TGAGCCCGCCGCTTCGGTGGGCGGCGGCGGCGGCACCCAGCAGGGGCCGG
TAGCCCAGCAGCCGGCAGGCAGCGCTGGCGTGCTGGCGCCGGGGATGCGC
CCTGTCGCGTTGGGCAAGTTGGCGCAAAATCTCCAGGAAGGGTGTTTGGA
GACGGCAACAACAGCCTCCCAAGGATCAGGATCCGGG back to top Coding sequence (CDS) from alignment at C-linearis_contig101:100035..101971+
>mRNA_C-linearis_contig101.717.1 ID=mRNA_C-linearis_contig101.717.1|Name=mRNA_C-linearis_contig101.717.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1998bp|location=Sequence derived from alignment at C-linearis_contig101:100035..101971+ (Chordaria linearis ClinC8C monoicous) back to top