Homology
BLAST of mRNA_C-linearis_contig101.716.1 vs. uniprot
Match:
D8LN78_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN78_ECTSI)
HSP 1 Score: 114 bits (286), Expect = 9.240e-26
Identity = 64/99 (64.65%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 31 VVIVLGECADYRQVMTYVVSKGLKSAERAWLVLLAARDPACHVSASTCGSDDGRDALALSALSGTLSIDWAPVVPVAARANVAAIVEAAAVLDRENFAA 327
VVIVLGECADYRQVMT+ +GLKS ERAWL+L AARDP CH SA+ CG DDGRDALALS++SG LSIDWA ++P + R +V A ++ A L RE A+
Sbjct: 243 VVIVLGECADYRQVMTFAAMRGLKS-ERAWLLLSAARDPTCHASAAACGRDDGRDALALSSMSGALSIDWA-LMPTS-RTSVEACMDPAVALGREGLAS 338
BLAST of mRNA_C-linearis_contig101.716.1 vs. uniprot
Match:
A0A6H5JK37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK37_9PHAE)
HSP 1 Score: 113 bits (282), Expect = 3.170e-25
Identity = 64/99 (64.65%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 31 VVIVLGECADYRQVMTYVVSKGLKSAERAWLVLLAARDPACHVSASTCGSDDGRDALALSALSGTLSIDWAPVVPVAARANVAAIVEAAAVLDRENFAA 327
VVIVLGECADYRQVMT+ +GLKS ERAWL+L AARDP CH SA+ CG DDGRDALALS++SG LSIDWA ++P + R + A V+ A L RE+ A+
Sbjct: 221 VVIVLGECADYRQVMTFAAMRGLKS-ERAWLLLSAARDPTCHASAAACGRDDGRDALALSSMSGALSIDWA-LMPTS-RTSAEAYVDPAVALGRESPAS 316
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.716.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 9.24e-26 / Id = 64.65 Expect = 3.17e-25 / Id = 64.65 Sequence D8LN78_ECTSI A0A6H5JK37_9PHAE
Match Name E-value Identity Description
D8LN78_ECTSI 9.240e-26 64.65 Tyrosine kinase specific for activated (GTP-bound)... [more] A0A6H5JK37_9PHAE 3.170e-25 64.65 Protein kinase domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 116.7 Seed ortholog evalue 1.3e-23 Seed eggNOG ortholog 2880.D8LN78 KEGG ko ko:K17535 Hectar predicted targeting category other localisation EggNOG free text desc. protein kinase activity EggNOG OGs COG0515@1,KOG0192@2759 EC 2.7.11.1 COG Functional cat. KLT Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko01000,ko01001 Exons 3 Model size 647 Cds size 645 Stop 0 Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927358.4477692-CDS-C-linearis_contig101:98430..98499 1622927358.4477692-CDS-C-linearis_contig101:98430..98499 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 98431..98499 + 1690879650.8534555-CDS-C-linearis_contig101:98430..98499 1690879650.8534555-CDS-C-linearis_contig101:98430..98499 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 98431..98499 + 1622927358.4598727-CDS-C-linearis_contig101:99088..99198 1622927358.4598727-CDS-C-linearis_contig101:99088..99198 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 99089..99198 + 1690879650.8727124-CDS-C-linearis_contig101:99088..99198 1690879650.8727124-CDS-C-linearis_contig101:99088..99198 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 99089..99198 + 1622927358.469276-CDS-C-linearis_contig101:99544..100010 1622927358.469276-CDS-C-linearis_contig101:99544..100010 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 99545..100010 + 1690879650.8823824-CDS-C-linearis_contig101:99544..100010 1690879650.8823824-CDS-C-linearis_contig101:99544..100010 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 99545..100010 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.716.1
>prot_C-linearis_contig101.716.1 ID=prot_C-linearis_contig101.716.1|Name=mRNA_C-linearis_contig101.716.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=215bp
GSGSGSGSGSVVIVLGECADYRQVMTYVVSKGLKSAERAWLVLLAARDPA back to top mRNA from alignment at C-linearis_contig101:98431..100010+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig101.716.1 ID=mRNA_C-linearis_contig101.716.1|Name=mRNA_C-linearis_contig101.716.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1580bp|location=Sequence derived from alignment at C-linearis_contig101:98431..100010+ (Chordaria linearis ClinC8C monoicous)GGGAGCGGGAGCGGGAGCGGGAGCGGTAGTGTCGTGATTGTTCTCGGGGA
GTGCGCCGACTACCGTCAG GTAGGCAAAGTTGCTCAACGGGGACAAATGG
ACCGTATCCACGCCGTGAGTAGTGGCGTGACCGTTGTGGAGAGGGAAGGT
GTACGCGTGCCCGTGCGTGTACGTGCACTACTTATGTGTATTGTTGAGGT
TAGGGGGAGCAGCGGCAGTGGCAAGGCTGTTATTTCCTCCGGGGGGGGCG
GATCATTCGGCTGCACGGTGGCAGATGTGAATCGCTTTGTTTGCGCGCAA
GTCGAACATTTCGTTCCATTGCTTCGCTGAGCTGCCGCGGCGTACGTTTT
AACCCTTATACCGGACGCAGCGGGTGTGAAGCGTACGGGGAGGGGGAGGG
GGCGTGGTGAAGATTTTGTTGCGTTCGTTCATGCACTTCTTTCCTTTTTT
TTTATGCCCTTTGCTTTCTCTTCTTCCCAGCGTCTGTGGCCGCATGCCTT
GCCTTGCCTCGGCTGCGTCTTGCTTTTTACGCGTGATCTCATCTCACCTC
ATCTCATGTCATCCCATGTCATGTCATGTCATCTCATCTCATCCCATGTC
ATCTCATCTCATCTCATCTCATCTTTTTTCCATGTCTCGTTTTGCTGTTT
TGACTCAGGTGATGACGTACGTGGTGTCGAAGGGGCTGAAGTCGGCGGAG
CGGGCGTGGCTCGTCCTCCTCGCAGCGCGCGATCCAGCTTGCCATGTCAG
CGCGTCCACCTGCGGCAG GCAAGTGTAGTGGTCTTGAAAAAAGGCCGCCC
GGCGCAGGGCTATACGATACTATACGATACTATACGATACTATACGATAC
TATACGATACTACCGGTCCCACAGAGCACGTGCAAACTAACGTTGTCGTT
CCCTCCACGACGAGTGGCTTGATCAGGACGGGAATTCTACACTCTCCGCC
CCCCCTGTGGTGTGGCCCTCCCCCCCCCTCCCCGCGACATCCTCTTTGCT
TGTTCGCCTGAACAACGCCCCGTTCCGTCACCACACGGCTAGTCCTAATT
GTCTGTCGCCACGATCCAATTCCCGCCTGCCCTTAAAAAAAAACTGGAAC
ACCGGGACAAGCAGCGACGACGGCCGGGACGCCCTGGCTCTCTCCGCCCT
GTCCGGGACCCTGTCGATTGACTGGGCCCCGGTGGTGCCGGTCGCCGCCC
GCGCGAACGTGGCGGCGATAGTGGAGGCCGCGGCCGTCCTCGACCGGGAG
AACTTCGCGGCGGCGTTCTTCCCGCCGCCCGCGGGAGAGGCGGTCGCGGA
ATCCAAGGCGTCTTCTGTCTTCTTCTCGGGGGGGTGGAGCGAGCAGCAGC
AGCAGCAGCAGCAGCAGCTGCTGCGCTCCTCGTCTTCGGACGCTGGTGAT
GAGCGACGTTCGTGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGTCTGTCC
CGCGGCCAAGGAGTACAGGGCCGTGCCCTTGGACGTCCCGGGGGGCGTTT
TTAGGGCGGCAGCTCTCATCTTCGACGCCGTCGAGCTTGGGGGGCGCGTC
CTTGCCGCGGCGGCCGGCGATGGGGACGGG back to top Coding sequence (CDS) from alignment at C-linearis_contig101:98431..100010+
>mRNA_C-linearis_contig101.716.1 ID=mRNA_C-linearis_contig101.716.1|Name=mRNA_C-linearis_contig101.716.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1290bp|location=Sequence derived from alignment at C-linearis_contig101:98431..100010+ (Chordaria linearis ClinC8C monoicous) back to top