mRNA_C-linearis_contig101.715.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig101.715.1 vs. uniprot
Match: D8LN78_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN78_ECTSI) HSP 1 Score: 270 bits (691), Expect = 6.600e-78 Identity = 144/205 (70.24%), Postives = 169/205 (82.44%), Query Frame = 2 Query: 452 GFLVDWGLRSPLYPAAAQAAVQAAARALQTSG-VLPAGDSVEWIWHDSACDAQKAFEVTETLVDTYGVDVIVGPACCSSATAASVVAARKGVPLISWACSAEHLSDKLLYPSFLRVVGPNGDFSEAVGSLFRRQG-WESVTVSILFAEGASRGLIYTTLARQMREQIVQDHGVSGVGVFRGFDGGEACATKAGDADGVRKAVDAV 1060
GFLVDWGL SPLYPA AQAAVQAAAR SG V GD VEW+WHDSACDAQKA++ TE L+DTYGVD+IVGPACCSSA AAS +AAR+GVP++SWACSA HLSDKLL+P+FLRVVG + +FS AVGSL++RQG E+V SILFAEG RGL YT+LA+QMR ++++ G S VGV+ GFDGGE+C AGDA GVRKAV+AV
Sbjct: 34 GFLVDWGLGSPLYPAVAQAAVQAAARGFGGSGGVFARGDRVEWVWHDSACDAQKAYDATEVLLDTYGVDLIVGPACCSSAAAASALAARRGVPVVSWACSAAHLSDKLLHPTFLRVVGASDEFSLAVGSLYKRQGSGEAVVTSILFAEGPLRGLAYTSLAQQMR-RVLEGQGGS-VGVYAGFDGGESCKAGAGDAKGVRKAVEAV 236
BLAST of mRNA_C-linearis_contig101.715.1 vs. uniprot
Match: A0A6H5JK37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK37_9PHAE) HSP 1 Score: 261 bits (667), Expect = 1.090e-74 Identity = 139/204 (68.14%), Postives = 163/204 (79.90%), Query Frame = 2 Query: 455 FLVDWGLRSPLYPAAAQAAVQAAARALQTSG-VLPAGDSVEWIWHDSACDAQKAFEVTETLVDTYGVDVIVGPACCSSATAASVVAARKGVPLISWACSAEHLSDKLLYPSFLRVVGPNGDFSEAVGSLFRRQG-WESVTVSILFAEGASRGLIYTTLARQMREQIVQDHGVSGVGVFRGFDGGEACATKAGDADGVRKAVDAV 1060
FLVDWGL SPLYPA AQA Q AAR SG V GD VEW+WHDSACDAQKA+ TE L+DTYGVD+IVGPACCSSA AAS +AAR+GVP++SWACSA HLSDKLL+P+FLRVVG + +FS AVGSL++RQG E+V SILFAEG SRGL Y +LA+QMR ++++ G VGV+ GFDGGE+C AGDA GVRKAV+AV
Sbjct: 13 FLVDWGLGSPLYPAVAQAVAQTAARGFGGSGGVFARGDKVEWVWHDSACDAQKAYAATEILLDTYGVDLIVGPACCSSAAAASALAARRGVPVVSWACSAAHLSDKLLHPTFLRVVGASDEFSLAVGSLYKRQGSGEAVVTSILFAEGPSRGLAYASLAQQMR-RVLEGQG-DPVGVYAGFDGGESCKAGAGDAKGVRKAVEAV 214
BLAST of mRNA_C-linearis_contig101.715.1 vs. uniprot
Match: A0A4D6Q337_FIMAN (Guanylate cyclase n=1 Tax=Fimbriaphyllia ancora TaxID=46750 RepID=A0A4D6Q337_FIMAN) HSP 1 Score: 79.7 bits (195), Expect = 1.590e-12 Identity = 57/211 (27.01%), Postives = 99/211 (46.92%), Query Frame = 2 Query: 374 RLAVFAWLLVGRLERNGGCEAAIVKIGFLVDWGLRSPLYPAAAQAAVQAAARALQTSGVLPAGDSVEWIWHDSACDAQKAFEVTETL--VDTYGVDVIVGPACCSSATAASVVAARKGVPLISWACSAEHLSDKLLYPSFLRVVGPNGDFSEAVGSLFRRQGWESVTVSILFAEGASRGLIYTTLARQMREQIVQDHGVSGVGVFRGFDGG 1000
++A+F W ++ + C +K+G V + P P A A + A + Q L G ++ ++ D C+A+ + E+ V++ VDV +GP C + + +AA +P+ISW C+A LSDK LYP F+R G F + + +L + W+ + AS +Y+ + ++ + +D G V F FD G
Sbjct: 2 KIALFLWSIICFVYL---CHGRDIKMGIFVPFTGSWPGGPKMASAILIAMDKVNQDPYWLQ-GHTLTYLVRDGRCEAKSSLEILADYYTVESPKVDVYIGPGCSAGCIPGAYLAAHWNIPMISWGCTASVLSDKTLYPYFVRTAGTYTGFGDLMRALLTQYSWDRAGIM------ASTETVYSEIGNTVKVSLEKD-GKFSVPFFGSFDPG 201
BLAST of mRNA_C-linearis_contig101.715.1 vs. uniprot
Match: UPI000719D9D9 (gamma-aminobutyric acid type B receptor subunit 1-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719D9D9) HSP 1 Score: 75.1 bits (183), Expect = 5.500e-12 Identity = 54/187 (28.88%), Postives = 86/187 (45.99%), Query Frame = 2 Query: 395 LLVGRLERNGGCEAA----IVKIGFLVDWGLRSPLYPAAAQAAVQAAARALQTSGVLPAGDSVEWIWHDSACDAQKAFEVTETLVDTYGVDVI---VGPACCSSATAASVVAARKGVPLISWACSAEHLSDKLLYPSFLRVVGPNGDFSEAVGSLFRRQGWESVTVSILFAEGASRGLIYTTLARQM 934
++VG L C A ++ +G L+ W PL P+ A AA A + +LP +++ ++W D+ CD + + D I +GP C A ++A+ +P++SW C++ HLSDK Y + RVVGP + ++ R W+ V IL A S L TL Q+
Sbjct: 9 VVVGALLITSACYAVEEQDVLTVGVLLPWSATRPLGPSIASAATIAIDDINANASLLP-DNTLRFVWLDTQCDEKMGLHAIVNMWSRRHADHIRGFIGPGCDVVCETAGLLASAWNMPIVSWGCTSNHLSDKDAYNTLARVVGPFTSVAPIGVAVMHRWRWKRV--GILAAADVSWQLTAETLKVQL 192
BLAST of mRNA_C-linearis_contig101.715.1 vs. uniprot
Match: A0A6P8IV78_ACTTE (Guanylate cyclase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IV78_ACTTE) HSP 1 Score: 73.2 bits (178), Expect = 2.110e-10 Identity = 48/164 (29.27%), Postives = 80/164 (48.78%), Query Frame = 2 Query: 383 VFAWLLVGRLERNGGCEAAIVKIGFLVDWGLRSPLYPAAAQAAVQAAARALQTSGVLPAGDSVEWIWHDSACDAQKAFEVTETL-VDTYGVDVIVGPACCSSATAASVVAARKGVPLISWACSAEHLSDKLLYPSFLRVVGPNGDFSEAVGSLFRRQGWESVTV 871
+ ++L G + G + ++IG L+ W P P A A + A + ++ +LP + + +IW DS C + + L V +DV +GPAC T+ +AA +P+IS+ C E LSDK YP+F+R VG L ++ GW+ + +
Sbjct: 15 ILLFVLAGNRK---GIXSKDLRIGALIPWNGSWPAGPRLASAXIVAIDK-VRHLNLLPEYN-LSYIWKDSFCQIGPSLQALSDLRVLKPSIDVFIGPACSMGCTSCGFLAAHWDLPMISYGCIDEDLSDKSSYPTFVRTVGSFSQSGNLFLLLMKQYGWKRIAI 173
BLAST of mRNA_C-linearis_contig101.715.1 vs. uniprot
Match: A0A3M6TYA9_POCDA (ANF_receptor domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TYA9_POCDA) HSP 1 Score: 65.5 bits (158), Expect = 5.910e-9 Identity = 34/109 (31.19%), Postives = 56/109 (51.38%), Query Frame = 2 Query: 560 GDSVEWIWHDSACDAQKAFEVTETLVDTYG-----VDVIVGPACCSSATAASVVAARKGVPLISWACSAEHLSDKLLYPSFLRVVGPNGDFSEAVGSLFRRQGWESVTV 871
G ++ ++ DS C+A+ + TLVD Y VDV +GP C + +AA +P++SW C+A LSDK LYP F+R G + ++ + W+ + +
Sbjct: 60 GHNLTFVVKDSKCEARASLA---TLVDYYTIENPKVDVFIGPGCSVGCVPGAYIAAHWNIPMVSWGCAATVLSDKTLYPYFVRTTGTFAGLGGLLRAILAKFKWDRMAI 165
BLAST of mRNA_C-linearis_contig101.715.1 vs. uniprot
Match: UPI0013903A7A (atrial natriuretic peptide receptor 1 isoform X3 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013903A7A) HSP 1 Score: 68.2 bits (165), Expect = 9.360e-9 Identity = 47/155 (30.32%), Postives = 76/155 (49.03%), Query Frame = 2 Query: 419 NGGCEAAIVKIGFLVDWGLRSPLYPAAAQAAVQAAARALQTSGVLPAGDSVEWIWHDSACDAQKAFEVTETL-VDTYGVDVIVGPACCSSATAASVVAARKGVPLISWACSAEHLSDKLLYPSFLRVVGP---NGDFSEAVGSLFRRQGWESVTV 871
+ G + V++ L+ W P P A A + A A++ G+LP ++ +++ DS C A L ++ VD VGPAC TA ++A +P+IS+ C L++K LYP+ R VGP +G F V S F+ W+ + +
Sbjct: 17 SDGQVVSDVRLAVLIPWTGNWPAGPRLASAVI-VAIDAVEELGILP-DHNITYVYRDSMCQTGPALNAMSDLWLEQPSVDAFVGPACSVGCTAGGHLSAHWNLPMISYGCLTADLTNKDLYPTTTRTVGPLVQSGKFILRVTSYFK---WKRIAI 166
BLAST of mRNA_C-linearis_contig101.715.1 vs. uniprot
Match: UPI0009E3E22C (atrial natriuretic peptide receptor 3-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3E22C) HSP 1 Score: 65.9 bits (159), Expect = 2.060e-8 Identity = 42/152 (27.63%), Postives = 71/152 (46.71%), Query Frame = 2 Query: 560 GDSVEWIWHDSACDAQKAFEVTETLVDTYGV-----DVIVGPACCSSATAASVVAARKGVPLISWACSAEHLSDKLLYPSFLRVVGPNGDFSEAVGSLFRRQGWESVTVSILFAEGASRGLIYTTLARQMREQIVQDHGVSGVGVFRGFDGG 1000
G ++ ++ DS C+A+ + + LVD Y V DV +GP C + + +A +P+ISW C+A LSDK LYP F+R G E + + + W+ + + AS +++ + + +D+ V F FD G
Sbjct: 60 GHNLTYLVKDSKCEARSSLAI---LVDYYTVESPKVDVFIGPGCSVACIPGAYIAEHWNIPMISWGCTASVLSDKTLYPYFVRTAGTYTGLGELLRAFLDQYKWDRIGIM------ASTETVFSETGNSAKVTLEKDNKFQ-VPFFGSFDPG 201
BLAST of mRNA_C-linearis_contig101.715.1 vs. uniprot
Match: UPI0009E4EC19 (speract receptor-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4EC19) HSP 1 Score: 66.6 bits (161), Expect = 3.210e-8 Identity = 44/152 (28.95%), Postives = 80/152 (52.63%), Query Frame = 2 Query: 431 EAAIVKIGFLVDWGLRSPLYPAAAQAAVQAAAR---ALQT----SGVLPAGDSVEWIWHDSACDAQKAFEVTETLVDTYGVDVIVGPACCSSATAASVVAARKGVPLISWACSAEHLSDKLLYPSFLRVVGPNGDFSEAVGSLFRRQGWESV 865
EA + +GFL+ + + + + A+ +A + A+ A++T S +LPA + ++W+D+ CD + + + ++ GV V +GP C A +AA VP++S+ C+ E LSDK LYP+F R + P + +L + W +
Sbjct: 56 EAGAITVGFLLPYNVSANVSGASVLSANEYASALPLAVETVNNDSSLLPA-HQITFVWNDTQCDEEISVKAMLYQLEK-GVQVFIGPGCTCETQAK--LAAAANVPMVSYMCTDERLSDKTLYPTFSRTIPPISGLVPPLHALMKHFNWTRI 203
BLAST of mRNA_C-linearis_contig101.715.1 vs. uniprot
Match: A0A6P8IWS5_ACTTE (atrial natriuretic peptide receptor 3-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IWS5_ACTTE) HSP 1 Score: 65.1 bits (157), Expect = 7.370e-8 Identity = 44/147 (29.93%), Postives = 69/147 (46.94%), Query Frame = 2 Query: 431 EAAIVKIGFLVDWGLRSPLYPAAAQAAVQAAARALQTSGVLPAGDSVEWIWHDSACDAQKAFEVTETLVDTYGVDVIVGPACCSSATAASVVAARKGVPLISWACSAEHLSDKLLYPSFLRVVGPNGDFSEAVGSLFRRQGWESVTV 871
E VKIG L+ P+ +A A A R +LP G ++ ++W+DS C A + VD I+G C AS++AA +P++SW C + LS+K +YP+F+R V + S+FR W + +
Sbjct: 28 EENTVKIGVLLPMTGYWPIGKTSASAITIAVERINDDPTLLP-GYNMTFLWNDSQCLAAEGLNQAVEF-KLANVDAIIGDGCDIICEPASLLAAAWNLPIVSWGCESSALSEKSVYPTFVRTVQSFSKMGDLFLSIFRYFKWNDIGI 172 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.715.1 >prot_C-linearis_contig101.715.1 ID=prot_C-linearis_contig101.715.1|Name=mRNA_C-linearis_contig101.715.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=236bp MRLLPRLAVFAWLLVGRLERNGGCEAAIVKIGFLVDWGLRSPLYPAAAQAback to top mRNA from alignment at C-linearis_contig101:91645..98400+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig101.715.1 ID=mRNA_C-linearis_contig101.715.1|Name=mRNA_C-linearis_contig101.715.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6756bp|location=Sequence derived from alignment at C-linearis_contig101:91645..98400+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig101:91645..98400+ >mRNA_C-linearis_contig101.715.1 ID=mRNA_C-linearis_contig101.715.1|Name=mRNA_C-linearis_contig101.715.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at C-linearis_contig101:91645..98400+ (Chordaria linearis ClinC8C monoicous)back to top |