Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 517 |
| Cds size | 381 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927359.0913093-CDS-C-linearis_contig101:41637..42018 | 1622927359.0913093-CDS-C-linearis_contig101:41637..42018 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 41638..42018 + |
| 1690879651.239024-CDS-C-linearis_contig101:41637..42018 | 1690879651.239024-CDS-C-linearis_contig101:41637..42018 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 41638..42018 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927359.1018183-UTR-C-linearis_contig101:42018..42154 | 1622927359.1018183-UTR-C-linearis_contig101:42018..42154 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig101 42019..42154 + |
| 1690879651.2479234-UTR-C-linearis_contig101:42018..42154 | 1690879651.2479234-UTR-C-linearis_contig101:42018..42154 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig101 42019..42154 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.711.1 >prot_C-linearis_contig101.711.1 ID=prot_C-linearis_contig101.711.1|Name=mRNA_C-linearis_contig101.711.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=127bp
PSFSFQNRRPQVDTLVRRFDAGENTYLYGRHCSNNNDCPSFARCGRVDWA
DILGKPTPCSFLPSLGDTKGLILINSRWSRAFPPALNRPFFPRSTQKDKE
KGTLKKRRFETKRAADFKHISASTSS* back to topmRNA from alignment at C-linearis_contig101:41638..42154+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig101.711.1 ID=mRNA_C-linearis_contig101.711.1|Name=mRNA_C-linearis_contig101.711.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=517bp|location=Sequence derived from alignment at C-linearis_contig101:41638..42154+ (Chordaria linearis ClinC8C monoicous)
CCCTCTTTTTCGTTTCAAAACAGACGCCCACAGGTCGACACTCTTGTTAG
GCGCTTCGACGCTGGCGAAAACACGTACTTGTACGGTAGGCATTGCTCCA
ACAATAACGATTGCCCGTCTTTTGCGAGGTGCGGGCGTGTAGACTGGGCG
GACATTCTCGGGAAACCAACCCCTTGCAGTTTCCTTCCCTCCCTGGGAGA
CACGAAAGGATTAATTTTGATTAATTCAAGATGGTCGCGGGCGTTCCCAC
CTGCTTTGAATAGACCGTTCTTTCCACGAAGCACGCAGAAAGATAAAGAG
AAGGGCACGCTTAAGAAACGCCGCTTCGAAACAAAGCGTGCCGCAGACTT
CAAACACATCTCCGCGAGTACATCTAGCTGAGCCACGAAGAGCAAGCCAA
CACAAAAGGCTGGGACAATAAATGGTACGTTCTAATAAAGCATTTACCCG
CGAGAGACGAATAAAACAACCGTCGCGGATCTCTCTTCGGCAACAAGGGC
AACCCCATCCCCCTCCC back to topCoding sequence (CDS) from alignment at C-linearis_contig101:41638..42154+ >mRNA_C-linearis_contig101.711.1 ID=mRNA_C-linearis_contig101.711.1|Name=mRNA_C-linearis_contig101.711.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at C-linearis_contig101:41638..42154+ (Chordaria linearis ClinC8C monoicous)
CCCTCTTTTTCGTTTCAAAACAGACGCCCACAGGTCGACACTCTTGTTAG
GCGCTTCGACGCTGGCGAAAACACGTACTTGTACGGTAGGCATTGCTCCA
ACAATAACGATTGCCCGTCTTTTGCGAGGTGCGGGCGTGTAGACTGGGCG
GACATTCTCGGGAAACCAACCCCTTGCAGTTTCCTTCCCTCCCTGGGAGA
CACGAAAGGATTAATTTTGATTAATTCAAGATGGTCGCGGGCGTTCCCAC
CTGCTTTGAATAGACCGTTCTTTCCACGAAGCACGCAGAAAGATAAAGAG
AAGGGCACGCTTAAGAAACGCCGCTTCGAAACAAAGCGTGCCGCAGACTT
CAAACACATCTCCGCGAGTACATCTAGCTGACCCTCTTTTTCGTTTCAAA
ACAGACGCCCACAGGTCGACACTCTTGTTAGGCGCTTCGACGCTGGCGAA
AACACGTACTTGTACGGTAGGCATTGCTCCAACAATAACGATTGCCCGTC
TTTTGCGAGGTGCGGGCGTGTAGACTGGGCGGACATTCTCGGGAAACCAA
CCCCTTGCAGTTTCCTTCCCTCCCTGGGAGACACGAAAGGATTAATTTTG
ATTAATTCAAGATGGTCGCGGGCGTTCCCACCTGCTTTGAATAGACCGTT
CTTTCCACGAAGCACGCAGAAAGATAAAGAGAAGGGCACGCTTAAGAAAC
GCCGCTTCGAAACAAAGCGTGCCGCAGACTTCAAACACATCTCCGCGAGT
ACATCTAGCTGA back to top
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