Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Model size | 385 |
| Cds size | 306 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927353.15751-UTR-C-linearis_contig100:284284..284361 | 1622927353.15751-UTR-C-linearis_contig100:284284..284361 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig100 284285..284361 + |
| 1690879647.1001146-UTR-C-linearis_contig100:284284..284361 | 1690879647.1001146-UTR-C-linearis_contig100:284284..284361 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig100 284285..284361 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927353.1744092-CDS-C-linearis_contig100:284361..284667 | 1622927353.1744092-CDS-C-linearis_contig100:284361..284667 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig100 284362..284667 + |
| 1690879647.1092958-CDS-C-linearis_contig100:284361..284667 | 1690879647.1092958-CDS-C-linearis_contig100:284361..284667 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig100 284362..284667 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig100.692.1 >prot_C-linearis_contig100.692.1 ID=prot_C-linearis_contig100.692.1|Name=mRNA_C-linearis_contig100.692.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=102bp
MFHACVFRVLASHPFCTAASLHLLALPAGVTAVAEANSVCEAPISGWPNV
CVFSSPLFWRQSLSDQGETCTARCGVFRVLHLFSVFFCTTRTNRGHTGGG
KH back to topmRNA from alignment at C-linearis_contig100:284285..284667+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig100.692.1 ID=mRNA_C-linearis_contig100.692.1|Name=mRNA_C-linearis_contig100.692.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=383bp|location=Sequence derived from alignment at C-linearis_contig100:284285..284667+ (Chordaria linearis ClinC8C monoicous)
CGGGGTTGGATGAAATATTCAGGTCAGATGCGTTGACTTGACCAGCCTCC
CCGTTATTGCGCCATGGATCATGTGTCATGTTTCATGCGTGCGTATTCCG
AGTGCTTGCGTCCCATCCATTCTGTACTGCGGCCAGTCTCCATCTTTTGG
CGTTACCAGCCGGGGTGACAGCAGTGGCGGAGGCAAACAGTGTGTGCGAA
GCGCCGATAAGCGGCTGGCCAAATGTGTGTGTGTTTTCGTCCCCTTTATT
TTGGCGGCAGTCCCTTTCCGATCAAGGTGAGACGTGTACTGCACGTTGCG
GTGTATTCAGAGTACTACACTTGTTCAGTGTATTTTTCTGTACAACTAGA
ACCAACCGGGGTCACACAGGAGGGGGTAAACAC back to topCoding sequence (CDS) from alignment at C-linearis_contig100:284285..284667+ >mRNA_C-linearis_contig100.692.1 ID=mRNA_C-linearis_contig100.692.1|Name=mRNA_C-linearis_contig100.692.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at C-linearis_contig100:284285..284667+ (Chordaria linearis ClinC8C monoicous)
ATGTTTCATGCGTGCGTATTCCGAGTGCTTGCGTCCCATCCATTCTGTAC
TGCGGCCAGTCTCCATCTTTTGGCGTTACCAGCCGGGGTGACAGCAGTGG
CGGAGGCAAACAGTGTGTGCGAAGCGCCGATAAGCGGCTGGCCAAATGTG
TGTGTGTTTTCGTCCCCTTTATTTTGGCGGCAGTCCCTTTCCGATCAAGG
TGAGACGTGTACTGCACGTTGCGGTGTATTCAGAGTACTACACTTGTTCA
GTGTATTTTTCTGTACAACTAGAACCAACCGGGGTCACACAGGAGGGGGT
AAACACATGTTTCATGCGTGCGTATTCCGAGTGCTTGCGTCCCATCCATT
CTGTACTGCGGCCAGTCTCCATCTTTTGGCGTTACCAGCCGGGGTGACAG
CAGTGGCGGAGGCAAACAGTGTGTGCGAAGCGCCGATAAGCGGCTGGCCA
AATGTGTGTGTGTTTTCGTCCCCTTTATTTTGGCGGCAGTCCCTTTCCGA
TCAAGGTGAGACGTGTACTGCACGTTGCGGTGTATTCAGAGTACTACACT
TGTTCAGTGTATTTTTCTGTACAACTAGAACCAACCGGGGTCACACAGGA
GGGGGTAAACAC back to top
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