Homology
BLAST of mRNA_C-linearis_contig100.687.1 vs. uniprot
Match:
A0A6H5JNE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE6_9PHAE)
HSP 1 Score: 478 bits (1229), Expect = 1.770e-161
Identity = 277/436 (63.53%), Postives = 320/436 (73.39%), Query Frame = 1
Query: 22 MSWCLMIAVLLSGPAVTPCGGT--VYGGSARPSYGMRSPGEDSGSGAIRRDSAAPGAFAIASGDHGGGAEALRRFASTRAMKTGTTIAGVVFEGGVVLGADTRATQGKTVCDRNCDKIHILAANIACCGAGTTADAVRITEGARLALLRMAGEMQACLPSSRFPLTRNQASNGDSGSEGDSNSSDVPLATRDSVLDVVQRQYLRVAAAAFLLKRHLFRYQGTVSAALVLGGVDAIGEHLYQ---IHEGGSFAEVDFTAMGSGSLAALSVLERGHRENLSEEEAKELVLQAIAAGIDNDLGSGSNIDVCVITHKRGLEHHRGAWRDPGVGDDAGAGRQLAQVLGTTGMGCAQHAATFPRKMEAAHQRQQQQQEGQRFDANVDVVEVVEVGGEDGSRAWVGDVRRRTREKSVMKVDHRDGGALRSFRSSALDDKVELL 1314
MSWCL+I +LL P + PCGG+ V+ A P+ + A G + GGAEALRRFASTRAMKTGTTIAGVVFEGGVVLGADTRAT GKTVCDRNCDKIHILA+NIACCGAGT+ADAVRITEGARLALLRMA EMQACLPSSR PL ++Q S ++G+ PLA+ DS LD VQR++LRV AAA LL+RHLFRYQGTVSAALVLGGVD IGEH+YQ IHEGGS AEV+FTAMGSGSLAALSVLERG+REN++E+EAKELVL+ IAAGIDNDLGSGSNID+CVIT +RGLEHHRGAW DPG+ DD A R+L + + + P +++A+ + DV+ VGGE GS AWVG+VRRR REKSVMKVDH D GALR +R SALDDK+E+L
Sbjct: 1 MSWCLLIVLLLGAPFLPPCGGSLHVFYSGATPTGSA--------------EGATAGLLGASDRSMEGGAEALRRFASTRAMKTGTTIAGVVFEGGVVLGADTRATGGKTVCDRNCDKIHILASNIACCGAGTSADAVRITEGARLALLRMAREMQACLPSSRSPLLQSQ-----SRADGER-----PLASCDSGLDEVQRKHLRVGAAALLLERHLFRYQGTVSAALVLGGVDVIGEHIYQAPLIHEGGSLAEVEFTAMGSGSLAALSVLERGYRENMTEQEAKELVLEGIAAGIDNDLGSGSNIDLCVITAERGLEHHRGAWTDPGLDDDGIAARELPEGI----------ESWQPNQLDASDDTES---------GGFDVI----VGGEGGSGAWVGNVRRRNREKSVMKVDHDDDGALRRYRCSALDDKIEVL 389
BLAST of mRNA_C-linearis_contig100.687.1 vs. uniprot
Match:
D7FTB7_ECTSI (Proteasome subunit beta 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB7_ECTSI)
HSP 1 Score: 380 bits (975), Expect = 3.310e-124
Identity = 211/280 (75.36%), Postives = 230/280 (82.14%), Query Frame = 1
Query: 256 MKTGTTIAGVVFEGGVVLGADTRATQGKTVCDRNCDKIHILAANIACCGAGTTADAVRITEGARLALLRMAGEMQACLPSSRFPLTRNQASNGDSGSEGDSNSSDVPLATRDSVLDVVQRQYLRVAAAAFLLKRHLFRYQGTVSAALVLGGVDAIGEHLYQIHEGGSFAEVDFTAMGSGSLAALSVLERGHRENLSEEEAKELVLQAIAAGIDNDLGSGSNIDVCVITHKRGLEHHRGAWRDPGVGDDAGAGRQLAQVLGTTG------MGCAQHAATFP 1077
MKTGTTIAGVVFEGGVVLGADTRAT GKTVCDRNCDKIHILA+NIACCGAGT+ADAVRITEGARLALLRMA EMQACLPSSR PL + Q S D + LA+ DS LD VQR++LRV AAA LLKRHLFRYQGTVSAALVLGGVD IGEH+YQIHEGGS AEV+FTAMGSGSLAALSVLERG+RENL+E+EAKELVL+ IAAGIDNDLGSGSNID+CVIT +RGLEHHRGAW DPG+ DD A R+L + G+ G MG QH P
Sbjct: 1 MKTGTTIAGVVFEGGVVLGADTRATGGKTVCDRNCDKIHILASNIACCGAGTSADAVRITEGARLALLRMAREMQACLPSSRSPLLQCQ-------SRADE---ERALASCDSGLDEVQRKHLRVGAAALLLKRHLFRYQGTVSAALVLGGVDVIGEHIYQIHEGGSLAEVEFTAMGSGSLAALSVLERGYRENLTEQEAKELVLEGIAAGIDNDLGSGSNIDLCVITAERGLEHHRGAWTDPGLDDDDIAARELPE--GSRGSENDNKMGQVQHTDARP 268
BLAST of mRNA_C-linearis_contig100.687.1 vs. uniprot
Match:
A0A6H5L5A8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5A8_9PHAE)
HSP 1 Score: 236 bits (602), Expect = 2.280e-69
Identity = 134/213 (62.91%), Postives = 156/213 (73.24%), Query Frame = 1
Query: 574 PLATRDSVLDVVQRQYLRVAAAAFLLKRHLFRYQGTVSAALVLGGVDAIGEHLYQ---IHEGGSFAEVDFTAMGSGSLAALSVLERGHRENLSEEEAKELVLQAIAAGIDNDLGSGSNIDVCVITHKRGLEHHRGAWRDPGVGDDAGAGRQLAQVLGTTGMGCAQHAATFPRKMEAAHQRQQQQQEGQRFDANVDVVEVVEVGGEDGSRAWVG 1203
PLA+ DS LD VQR++LRV AAA LLKRHLF+YQGTVSAA VLGGVD IGEH+YQ IHEGGS AEV+FTAMGSGSLAALSVLERG+RENL+E+E KELVL+ IAAGIDNDLGSGSNID+CVIT + GLEHHRGAW DPG+ DD A R+L + + P +++A+ D+ D +VV VGGE GS AWVG
Sbjct: 76 PLASCDSGLDEVQRKHLRVGAAALLLKRHLFQYQGTVSAAFVLGGVDVIGEHIYQAPLIHEGGSLAEVEFTAMGSGSLAALSVLERGYRENLTEQETKELVLEGIAAGIDNDLGSGSNIDLCVITAEGGLEHHRGAWTDPGLDDDGIAARELPEGI----------ERLEPNQLDASG------------DSERDGFDVV-VGGEGGSGAWVG 265
BLAST of mRNA_C-linearis_contig100.687.1 vs. uniprot
Match:
A0A836CF21_9STRA (Nucleophile aminohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF21_9STRA)
HSP 1 Score: 197 bits (502), Expect = 3.780e-54
Identity = 120/246 (48.78%), Postives = 151/246 (61.38%), Query Frame = 1
Query: 229 LRRFASTRAMKTGTTIAGVVFEGGVVLGADTRATQGKTVCDRNCDKIHILAANIACCGAGTTADAVRITEGARLALLRMAGEMQACLPSSRFPLTRNQASNGDSGSEGDSNSSDVPLATRDSVLDVVQRQYLRVAAAAFLLKRHLFRYQGTVSAALVLGGVDAIGEHLYQIHEGGSFAEVDFTAMGSGSLAALSVLERGHRENLSEEEAKELVLQAIAAGIDNDLGSGSNIDVCVITHKRGLEHHR 966
L F + R KTGTTI GVV + +VLGADTRAT +TV D+NC+KIH +AANI CCGAGT+AD R+T ARL ++ MQ+ P+ L+ D VQRQ+ RVAAA LK + VSAA VLGGVD G HLY I + GS ++ F A+GSGS+AALSVLE +++ +SE+ A +LV AIAAGIDNDLGSGSNID+C+I K +E+HR
Sbjct: 39 LDDFIAARVRKTGTTIVGVVCDDCLVLGADTRATNDRTVADKNCEKIHKIAANIYCCGAGTSADCERLTLEARLRMMEFTRLMQSVHPAHSGELST----------------------------DDVQRQHCRVAAAHRFLKNATYHSVEDVSAAFVLGGVDTTGPHLYAIDQDGSSSKGPFAALGSGSMAALSVLESEYQDGISEQAAMDLVCLAIAAGIDNDLGSGSNIDLCII-RKHTVEYHR 255
BLAST of mRNA_C-linearis_contig100.687.1 vs. uniprot
Match:
A0A812N4R2_9DINO (Proteasome subunit beta n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812N4R2_9DINO)
HSP 1 Score: 193 bits (491), Expect = 2.890e-53
Identity = 117/247 (47.37%), Postives = 146/247 (59.11%), Query Frame = 1
Query: 250 RAMKTGTTIAGVVFEGGVVLGADTRATQGKTVCDRNCDKIHILAANIACCGAGTTADAVRITEGARLALLRMAGEMQACLPSSRFPLTRNQASNGDSGSEGDSNSSDVPLATRDSVLDVVQRQYLRVAAAAFLLKRHLFRYQGTVSAALVLGGVDAIGEHLYQIHEGGSFAEVDFTAMGSGSLAALSVLERGHRENLSEEEAKELVLQAIAAGIDNDLGSGSNIDVCVITHKRGLEHHRGAWRDPGV 990
+A+KTGTTI GVVF+GGVVLGADTRAT+G V D+NC+KIH LA NI CCGAGT AD IT+ L +S L R Q + T+ RV A LLKR LF+YQG +SAALVLGGVD G HLY ++ GS ++ F +MGSGSLAA+++LE G+++ L+E+EAK LV +AI AGI NDLGSGSN+D+ +I E R GV
Sbjct: 24 KALKTGTTICGVVFDGGVVLGADTRATEGTVVADKNCEKIHYLAPNIHCCGAGTAADTENITQ----------------LTASNLELLRRQ------------------MGTQS-----------RVVTAMTLLKRRLFQYQGHISAALVLGGVDCTGPHLYTVYPHGSTDKLPFVSMGSGSLAAMAMLESGYKDGLTEDEAKALVARAIRAGIFNDLGSGSNVDLTIIRTDGATEQLRSYESQNGV 225
BLAST of mRNA_C-linearis_contig100.687.1 vs. uniprot
Match:
A9S713_PHYPA (Proteasome subunit beta n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9S713_PHYPA)
HSP 1 Score: 192 bits (487), Expect = 1.120e-52
Identity = 114/236 (48.31%), Postives = 143/236 (60.59%), Query Frame = 1
Query: 259 KTGTTIAGVVFEGGVVLGADTRATQGKTVCDRNCDKIHILAANIACCGAGTTADAVRITEGARLALLRMAGEMQACLPSSRFPLTRNQASNGDSGSEGDSNSSDVPLATRDSVLDVVQRQYLRVAAAAFLLKRHLFRYQGTVSAALVLGGVDAIGEHLYQIHEGGSFAEVDFTAMGSGSLAALSVLERGHRENLSEEEAKELVLQAIAAGIDNDLGSGSNIDVCVITHKRGLEHHR 966
KTGTTI G++F+ GV+LGADTRAT+G+ VCD+NC+KIH LA NI+CCGAGT AD +T+ + SS+ L R R+S RV A +LK HLFRYQG VSAALVLGGVD G HL+ ++ GS + F MGSGSLAA+SV E ++ENL++EE E+V AI AGI NDLGSGSN+D+C+IT K G E+ R
Sbjct: 38 KTGTTIVGLIFKDGVILGADTRATEGEIVCDKNCEKIHYLAPNISCCGAGTAADTENVTD----------------MVSSQLVLHRYATG-------------------RES----------RVVTALTMLKSHLFRYQGQVSAALVLGGVDVTGPHLHAVYPHGSTDTLPFATMGSGSLAAMSVFESRYKENLTKEEGMEIVSAAICAGIFNDLGSGSNVDLCIIT-KEGKEYLR 227
BLAST of mRNA_C-linearis_contig100.687.1 vs. uniprot
Match:
B8LCN6_THAPS (Proteasome subunit beta (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCN6_THAPS)
HSP 1 Score: 192 bits (487), Expect = 2.050e-52
Identity = 116/228 (50.88%), Postives = 137/228 (60.09%), Query Frame = 1
Query: 253 AMKTGTTIAGVVFEGGVVLGADTRATQGKTVCDRNCDKIHILAANIACCGAGTTADAVRITEGARLALLRMAGEMQACLPSSRFPLTRNQASNGDSGSEGDSNSSDVPLATRDSVLDVVQRQYLRVAAAAFLLKRHLFRYQGTVSAALVLGGVDAIGEHLYQIHEGGSFAEVDFTAMGSGSLAALSVLERGHRENLSEEEAKELVLQAIAAGIDNDLGSGSNIDVCVI 936
A KTGTTI G+V+ GG+VLGADTR+T TV D+NC+KIH +A NI CCGAGT AD + TE L SS+ L R +G S RV A LLKR LFRYQG VSAALVLGG D G HLYQI+ GS ++ FT MGSGSLAA++V E +R++LSEEEA ELV ++I AGI NDLGSGSN+D CVI
Sbjct: 48 ATKTGTTIVGLVYPGGIVLGADTRSTNDTTVADKNCEKIHYIAPNIYCCGAGTAADTEKSTE----------------LISSQMELLRMNTGDGQS----------------------------RVVTACTLLKRMLFRYQGYVSAALVLGGCDVNGPHLYQIYPHGSTGKLPFTTMGSGSLAAMAVFEADYRDDLSEEEAVELVKRSILAGIFNDLGSGSNVDTCVI 231
BLAST of mRNA_C-linearis_contig100.687.1 vs. uniprot
Match:
A0A1S2Y6H9_CICAR (Proteasome subunit beta n=8 Tax=NPAAA clade TaxID=2231382 RepID=A0A1S2Y6H9_CICAR)
HSP 1 Score: 190 bits (483), Expect = 3.730e-52
Identity = 115/238 (48.32%), Postives = 142/238 (59.66%), Query Frame = 1
Query: 256 MKTGTTIAGVVFEGGVVLGADTRATQGKTVCDRNCDKIHILAANIACCGAGTTADAVRITEGARLALLRMAGEMQACLPSSRFPLTRNQASNGDSGSEGDSNSSDVPLATRDSVLDVVQRQYLRVAAAAFLLKRHLFRYQGTVSAALVLGGVDAIGEHLYQIHEGGSFAEVDFTAMGSGSLAALSVLERGHRENLSEEEAKELVLQAIAAGIDNDLGSGSNIDVCVIT--HKRGLEHH 963
+KTGTTI G+VF+ G++LGADTRAT+G V D+NC+KIH +A NI CCGAGT AD +T+ + SS+ L R R+S RV A LLKRHLF YQG VSAALVLGGVD G HL+ I+ GS + F MGSGSLAA+SV E ++E+LS +E +LV++AI AGI NDLGSGSN+DVCVIT HK L +H
Sbjct: 35 LKTGTTIVGLVFQDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD----------------MVSSQLQLHRYHTG-------------------RES----------RVVTALTLLKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVVEAICAGIFNDLGSGSNVDVCVITKGHKEYLRNH 227
BLAST of mRNA_C-linearis_contig100.687.1 vs. uniprot
Match:
A0A835ZKI2_9STRA (Proteasome endopeptidase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKI2_9STRA)
HSP 1 Score: 190 bits (483), Expect = 7.910e-52
Identity = 117/242 (48.35%), Postives = 143/242 (59.09%), Query Frame = 1
Query: 250 RAMKTGTTIAGVVFEGGVVLGADTRATQGKTVCDRNCDKIHILAANIACCGAGTTADAVRITE--GARLALLRMAGEMQACLPSSRFPLTRNQASNGDSGSEGDSNSSDVPLATRDSVLDVVQRQYLRVAAAAFLLKRHLFRYQGTVSAALVLGGVDAIGEHLYQIHEGGSFAEVDFTAMGSGSLAALSVLERGHRENLSEEEAKELVLQAIAAGIDNDLGSGSNIDVCVITHKRGLEHHRG 969
RA TGTTI G V++ G+VLGADTRAT G VCD+NC+KIH LA NI CCGAGT AD + TE ++L LLR++ Q+ RV A +LKR LFRYQG VSAALVLGGVDA G HLY I+ GS ++ + MGSGSLAA+SV E G++E+++EEEA +LV +AI AGI NDLGSGSN D+ VI K + HRG
Sbjct: 53 RAKLTGTTICGCVYKDGIVLGADTRATGGTEVCDKNCEKIHYLAPNIYCCGAGTAADTEKTTELISSQLDLLRLSTGTQS-----------------------------------------------RVVTACTMLKRMLFRYQGHVSAALVLGGVDATGPHLYNIYPHGSSDKLPYVTMGSGSLAAMSVFETGYKEDMTEEEATDLVKEAILAGIFNDLGSGSNCDITVI-RKGEVSRHRG 246
BLAST of mRNA_C-linearis_contig100.687.1 vs. uniprot
Match:
C1EBX1_MICCC (Proteasome subunit beta n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EBX1_MICCC)
HSP 1 Score: 190 bits (483), Expect = 8.140e-52
Identity = 110/229 (48.03%), Postives = 135/229 (58.95%), Query Frame = 1
Query: 253 AMKTGTTIAGVVFEGGVVLGADTRATQGKTVCDRNCDKIHILAANIACCGAGTTADAVRITEGARLALLRMAGEMQACLPSSRFPLTRNQASNGDSGSEGDSNSSDVPLATRDSVLDVVQRQYLRVAAAAFLLKRHLFRYQGTVSAALVLGGVDAIGEHLYQIHEGGSFAEVDFTAMGSGSLAALSVLERGHRENLSEEEAKELVLQAIAAGIDNDLGSGSNIDVCVIT 939
AMKTGTTI GV F+GGVVLGADTR+T G+TV D+NC+KIH +A NI CCGAGT AD +T G + + L R R RV A +LK HLF+YQG V AALVLGGVD G HL+ +H GS + F MGSGSLAA++V E +E+++EEEAKE+V ++I AGI NDLGSGSN+D+CVIT
Sbjct: 44 AMKTGTTITGVCFKGGVVLGADTRSTNGETVADKNCEKIHYIAPNIYCCGAGTAADTEAVT-----------GMIASALELHRLATKRKS----------------------------------RVVTALTMLKSHLFKYQGHVGAALVLGGVDINGPHLFSVHPHGSSDSLPFATMGSGSLAAMAVFEADFKEDMTEEEAKEIVARSIRAGIFNDLGSGSNVDLCVIT 227
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig100.687.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.77e-161 / Id = 63.53 Expect = 3.31e-124 / Id = 75.36 Expect = 2.28e-69 / Id = 62.91 Expect = 3.78e-54 / Id = 48.78 Expect = 2.89e-53 / Id = 47.37 Expect = 1.12e-52 / Id = 48.31 Expect = 2.05e-52 / Id = 50.88 Expect = 3.73e-52 / Id = 48.32 Expect = 7.91e-52 / Id = 48.35 Expect = 8.14e-52 / Id = 48.03 Sequence A0A6H5JNE6_9PHAE D7FTB7_ECTSI A0A6H5L5A8_9PHAE A0A836CF21_9STRA A0A812N4R2_9DINO A9S713_PHYPA B8LCN6_THAPS A0A1S2Y6H9_CICAR A0A835ZKI2_9STRA C1EBX1_MICCC Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig100.687.1
>prot_C-linearis_contig100.687.1 ID=prot_C-linearis_contig100.687.1|Name=mRNA_C-linearis_contig100.687.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=433bp
MMSWCLMIAVLLSGPAVTPCGGTVYGGSARPSYGMRSPGEDSGSGAIRRD back to top mRNA from alignment at C-linearis_contig100:205472..209856+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig100.687.1 ID=mRNA_C-linearis_contig100.687.1|Name=mRNA_C-linearis_contig100.687.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4385bp|location=Sequence derived from alignment at C-linearis_contig100:205472..209856+ (Chordaria linearis ClinC8C monoicous)CGGCCACCGCTTGTGTGT ATGATGTCGTGGTGCCTCATGATAGCAGTTCT
CCTCAGTGGGCCTGCCGTGACCCCATGCGGTGGTACAGTTTACGGAGGCA
GTGCTCGTCCCAGCTACGGCATGCGGTCTCCCGGGGAAGACAGCGGGAGC
GGCGCAATTAGGAGAGATTCCGCCGCACCTGGTGCGTTTGCGATAGCGAG
TGGTGACCATGGCGGTGGGGCTGAGGCTCTACGAAGGTTTGCGTCGACAC
GCGCCATGAAGACGGGCACCACCATCGCCGGCGTGGTTTTTGAG GTAAGT
TTTGCATTGCGCTGCATTCCATTCGTCTCTCTGCCGCAGAAGAGGGGAAA
GGAACGTCAACCCCTTGCCGTGTTAACGCCAGTTTGGGCATTTTGTACAA
CTGTCCTTGCCAGCAGTAGATATCAAGGTGCTGGTGTTCTTGTACACCCA
CCCTGTGATCCAGTATCCACCCCTTCTGCCCACCCCAACAATAAGCACCA
GGTTTTGAAATGTACCTAACCTAATGACTTGAGATAACACCCCCCTAACG
AAGACCTTGCGTTATAGTCCTCGAGATATCAGCCTCTATAATAGATTCAC
GCGTGCGATGCATTTCGGAGATGAGAAGCACGCCCTGAGTGTACTCATCA
TGTCCTATCGTCCAGGCAGCTCGAGGGTACTCGATATTTTTGCTCCACAG
CTACCCCCTCGAGATGTGATGTAGTATTGCGCTACCACAGCTGCCCCCTC
GAGATGCGATCTACTGCTGCTGAGTAGACATCCCACCGTAGTACATCCAC
AGCAGTAGTGCTGCATTGGGAGGCGTGCCTATGTTTTCCGTTCCTACTCT
CTGTTCCCTTCATCTAGGTAGCCGCGTTGCGCGCTTTCTGTGTAATCCGG
TTCTTTGTTTTCGGTGAGCAAGGGTGGCCGTACACGTTTGCCCTGGACGC
GTCTCGTGTTTCAATACAAGTAGCAGCCGACCGTCATTTGCATGACATGA
CATGTTGCCGCCTTCTGCCAGGGGGGCGTGGTCCTGGGGGCGGATACTCG
AGCAACCCAGGGAAAGACGGTGTGCGATCGCAATTGCGACAAGATCCACA
TCCTCGCCGCCAACATCGCCTGCTGCGGGGCTGGAACCACCGCCGACGCT
GTCAGAATAACTGAG GTGGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTAGTGTTGTGGTTGCTGTGGTTGTTGTTGCTGCTGCT
GCTACTGTGGCTGCTGCTGTGGCTGCTGCTGTGGCTGCTGCTGTGGCTGG
CATTTTTCTTTCGTCGAAGATCAGGTCGCCTGGTGTGGCGATGTTTTCAG
GTCGTTTGGTGTGGTGGTGTCGACGAATGCAACAACGACGTACAAACCTC
CGTTCCCGTGGATCCTAGCACCCCAGTCAGCTTCATTCGACCGTGTATTT
TCATCCCTTATCGCATCTTGCAGGGGGCTCGCCTGGCGCTGTTGCGCATG
GCCGGAGAGATGCAAGCCTGCTTACCGTCCTCAAGATTTCCCCTCACGCG
GAATCAAGCCTCGAACGGCGATAGTGGAAGCGAAGGTGACAGCAACAGCA
GCGATGTGCCGTTGGCCACCCGCGATAGCGTCCTGGACGTGGTGCAGCGG
CAGTACCTTCGCGTCGCGGCGGCAGCGTTTTTGCTGAAACGGCACCTGTT
CCGATACCAGGGCACGGTCTCTGCCGCCCTGGTGCTGGGAGGGGTGGACG
CCATCGGGGAACATCTGTATCAG GTGAGCTTCGCTAGTGCCAAAGCAGCG
GCAGAACGCCCTTTGGTGCCAAGATTTGACACCATGCTACGACGGGGTTG
GACAACAACAGGAACATGTAGCCTTAAACTTGGAAAGGCACACACAGCCG
TTAGCGATTCTTATTGCCTTCGTCCCCAGTCAAGTCGTTGCCCTCTCAAG
GCGCAAAAATGCTCGTCCAGTTGGGTACTTTCTTATCGAGGCGTTCTCTT
TTCGAAGAAAAACTTTCAACGTTGAGTTCTATCTCGCACTGCGTGCAAGC
TGGTTCTCGCTTCGAGTTCCCATGCACACCCCTCCTCTCTTTTTTCTGCC
TGGTCGTCGTCACCAGCATGATCCCAACCCACAGTTCCCACAGCTTCCCT
CTGCCTTGGGGTTCGGAAAACAGCAGCCATATTGCTATCAAGGCCATCGC
TCGTTCGCGGTGAAGTCACGAGGAGAAAAACGTGCAATCTCTGTCCACTC
GGTCACTGCAAGCAGCATCTATTGCAACCATCCCTTCGCTCTTCGCTTTT
TGGTGTTGCTCAGATCCACGAAGGGGGAAGCTTCGCCGAGGTGGATTTTA
CTGCCATGGGCAGCGGGAGTCTAGCGGCGCTAAGCGTACTCGAG GTGCAT
ACATACAACAAACACCTCATGCTAAATCACAGCACGGACGCCTCACACTG
ACCCCAGAGTACACACAGTAGTGCAGGACGCCTTCTTATGGTGTGGAATG
TCGAATACGCGCGACAAGAGAGGAAACGAATAGGAGTGGACACGCTTCGC
AAGAGTGTGGGTGGACAACAGTTGGGAGTTGATGATCTCCCGCCTGCGTC
TTCCACATGGTTTTCTTGTACATGGTTAGACCTCGTCCATACGTGTCGTG
GTTCTCGGAGTAACCCTGTCAATCTTTCGTCGTGCGTCGTGCATCGTGCA
TCGTACATCGTGTTTCGTGCACCATGTAGCGTGCATTGCGAATCATGGCA
TTGTGCAGCATGCAACGTGCATCCGTGATTGATTGTGCGTTCGTGCACTT
ATGTATCGTAAATCGTGAATCATCGCTCTATGCACTTATGCCATGCCTCC
TGCATCGTGCATCGTGCATCATGTTGCATCATGAATCAGCGGGGCCACCG
GGAAAACTTGAGCGAAGAGGAAGCGAAGGAACTTGTCCTGCAAGCCATCG
CCGCGGGGATAGACAACGACTTGGGCAGCGGGAGCAACATCGACGTGTGC
GTCATCACGCACAAGAGAGGCCTGGAGCACCACAGGGGGGCTTGGAGAGA
CCCAGGTGTTGGCGATGATGCTGGTGCTGGTCGACAGCTCGCCCAAG GTC
AGCCCTTGTCATGAATATATCGTTGTCAGGAAGAATGTCAGAAGAATGTC
AGGAAGAACCAAGACCAAAACTCTTTTATCTGTATTATCTGGTGTCATTT
TTATTTTCCTTTTTTGCATAAATTGATAGAGGTATCTTATTAAAATAAGG
ATCTTATGGGTTTTTGCGATTTTCTTTAGGTCTTTTTCCAGAAGCTTCGG
TATCTTTCACATGGCAGCAGTGCATCAATGTTCAGCTGGCGTGTATCAAT
GTTCACCCGTTGTCCTCTACGCCAAGGTGCAAAACATTCTGCGCTCGTAC
TTCAAATCACTAAGTTCTTGGAACAACCGGTATGGGCTGCGCGCAACATG
CGGCAACATTTCCGAGGA GTGAACTCGTTCTGACCCCGCGTGCTGACCGC
AGAAATGGAGGCTGCTCACCAACGGCAGCAGCAGCAGCAGGAAGGCCAAC
GTTTTGACGCGAATGTTGATGTCGTCGAGGTCGTCGAGGTCGGCGGAGAA
GACGGGTCGCGAGCGTGGGTAGGAGACGTCCGGCGAAGAACGAGAGAGAA
GAGCGTGATGAAGGTGGACCACCGCGACGGCGGAGCGTTGCGGAGCTTCC
GGAGCAGCGCTCTTGATGACAAGGTCGAACTTCTGTAG TGTTTGGTGATT
TTTTTTGCGTTTACCTCGGTGCTTCGCTGTAGATTGTTGCTCTTGACGGC
AAAGGTCGAACTGCTGTAATTGGTGGTGGCGCAGATTCCGTCTGTGCCGG
TTATTATAGTTACCGTTCTGCGTCTGGTGGTTTCATGTTCGGAACGACTT
GAGCGATGAATGCACGTGCTATCATTGTGGTGATGAGATGTGGGGGTTGC
TTTGTTTCCATTTGGTGTGTGGATGTGCCCGACATTGTCGTGGGAGGGAA
CCAGCGGGGTCGGTATTTGGCAAGGGTTCGAGTGTCGAGTGTCGAGTGTC
GTCTTGTTTTTTTTGTCAAGTACAAGTACAAGAAATACGACGAAAGAAAA
GGGAAGGCATGCTGTTTTATCGTCTCCGTCGCAAGGACGGACCTCTGATG
CCCGCGCAGTTGGACAGATGTCACTCCGTGATGGGAGGGGGTTTCGAGTT
CGGTAAGCGAGGTCTAGTTGAGTACATACTTCTAGAAGTAAGGGTCGAAG
GGAAAGCTCAACAAAACAAGGGATAGCGTTCAGAAGTGGGGGATGTGCGA
ACAGGCACGGGTCAATGATGCTCTGAAAAGCTGGTATACGTGCGTGAATC
AAACCAGCCTCCGTTGGCCATTGCCAAGGCAGCAA back to top Coding sequence (CDS) from alignment at C-linearis_contig100:205472..209856+
>mRNA_C-linearis_contig100.687.1 ID=mRNA_C-linearis_contig100.687.1|Name=mRNA_C-linearis_contig100.687.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2598bp|location=Sequence derived from alignment at C-linearis_contig100:205472..209856+ (Chordaria linearis ClinC8C monoicous) back to top