mRNA_C-linearis_contig10.678.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig10.678.1
Unique NamemRNA_C-linearis_contig10.678.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig10.678.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE)

HSP 1 Score: 515 bits (1327), Expect = 1.360e-173
Identity = 255/360 (70.83%), Postives = 288/360 (80.00%), Query Frame = 1
Query:  106 RSDSSCISWRRFQNLIEGVKGVTWVCKFIRPAETRWMVVWDAAALLEERWDAVRWLHMDWAASKLLGTPFMDYWYKSLCMLDDPLMRVHAKFSVALRKVVLSWAYNWIRGEGGYFVKGTGGVAERLPPGMRLAEAADFSLLLVKRLEELRAHPRKYFPELLAFAETTLKEAE----------------------LVHFMMNFGTGESGFFWEMIERWLKWMDMHQHLPYSMARLACSSFYESKWVGSEEAFEHAVGQEFARALLLVLWPELYEDAEWRSWEEEHTFLEVLEGDLLEATTTQAKDKLTLGMFSKLSASAGFREELEKYASSAHEKR-VVIDVLGENQTARVSGFEMIWNFP 1116
            RSDSSCISW RFQNL+ G KGV W CKFIRPAETRWMVVWDAAALLE+RWD VRWLH++WAA+KLLGTPFMDYW+KSLCMLDDPL+RVHAKF VALRKVVLSWAYNWIRGEGGY ++G GGVAERLP GMRLA+ ADFSLLLV+RLEELR HP+KYFP+LLA+AE TL E E                      L HFM NF   +SG F EMI RW KWMDMHQHLPYSMARLACSSF+E KW GSE+A EHAVGQE+ARA LL LWPEL E AEW  W+EEH +LE+L  DL EA TT+ KD+LT GMFSKL+ASA FR E+E+Y+ SA EK+ +V+D   E+Q  RVSGF+MIW+FP
Sbjct:  285 RSDSSCISWERFQNLVFGCKGVKWGCKFIRPAETRWMVVWDAAALLEDRWDEVRWLHLEWAAAKLLGTPFMDYWFKSLCMLDDPLIRVHAKFCVALRKVVLSWAYNWIRGEGGYLLEGRGGVAERLPAGMRLADIADFSLLLVERLEELRMHPKKYFPDLLAWAEKTLSEEEVSANAAQTLLLFDPVPYCPMLQLAHFMRNFQNEKSGLFREMIARWTKWMDMHQHLPYSMARLACSSFFEGKWAGSEKAIEHAVGQEYARASLLALWPELNEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYSLSAREKKEIVVDDDAESQAPRVSGFDMIWSFP 644          
BLAST of mRNA_C-linearis_contig10.678.1 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE)

HSP 1 Score: 409 bits (1052), Expect = 8.340e-137
Identity = 223/373 (59.79%), Postives = 243/373 (65.15%), Query Frame = 1
Query:    1 MECQFFMGPLGKGSWHEWEDHHLVALLGTLWYNTSRSDSSCISWRRFQNLIEGVKGVTWVCKFIRPAETRWMVVWDAAALLEERWDAVRWLHMDWAASKLLGTPFMDYWYKSLCMLDDPLMRVHAKFSVALRKVVLSWAYNWIRGEGGYFVKGTGGVAERLPPGMRLAEAADFSLLLVKRLEELRAHPRKYFPELLAFAETTLKEAELVHFMMNFGTGESGFFWEMIERWLKWMDMHQHLPYSMARLACSSFYESKWVGSEEAFEHAVGQEFARALLLVLWPELYEDAEWRSWEEEHTFLEVLEGDLLEATTTQAKDKLTLGMFSKLSASAGFREELEKYASSAHEKR-VVIDVLGENQTARVSGFEMIWNFP 1116
            MEC+FFMGPLGKGSWHEWED+HLVALL TLWYN SRSDSSCISWRR +NL+   KGV W+CKFIRPAETRWMV+ DAAALLEERWD                        +S  MLDDPL+RVHAKF VALRK VLSWAYNWIRGEGGYF++GTGGVAERLPPGMRLAEAADFSLLLVKRLE  +                                                         SM RLACSSFYE KW GSEE FEHAVGQE ARALLL  WP  YE  EW+ WEE++TF E               +KLTLGMFSKL+ASA FREELE+YA+SAHEK+ VV DV  ENQT RVSGF+MIW FP
Sbjct:    1 MECEFFMGPLGKGSWHEWEDNHLVALLATLWYNISRSDSSCISWRRVKNLVFRAKGVMWICKFIRPAETRWMVIRDAAALLEERWD------------------------ESTYMLDDPLIRVHAKFCVALRKAVLSWAYNWIRGEGGYFLEGTGGVAERLPPGMRLAEAADFSLLLVKRLERSQRM-------------------------------------------------------SMTRLACSSFYEGKWAGSEEGFEHAVGQEVARALLLAFWPNRYESTEWKGWEEQNTFRE---------------NKLTLGMFSKLAASAEFREELERYAASAHEKKKVVSDVDVENQTPRVSGFDMIWTFP 279          
BLAST of mRNA_C-linearis_contig10.678.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 2.340e-101
Identity = 172/345 (49.86%), Postives = 225/345 (65.22%), Query Frame = 1
Query:    1 MECQFFMGPLGKGSWHEWEDHHLVALLGTLWYNTSRSDSSCISWRRFQNLIEGV--KGVTWVCKFIRPAETRWMVVWDAAALLEERWDAVRWLHMDWAASKLLGTPFMDYWYKSLCMLDDPLMRVHAKFSVALRKVVLSWAYNWIRGEGGYFVKGTGGVAERLPPGMRLAEAADFSLLLVKRLEELRAHPRKYFPELLAFAETTLKEAELVHFMMNFGTGESGFFWEMIERWLKWMDMHQHLPYSMARLACSSFYESKWVGSEEAFEHAVGQEFARALLLVLWPELYEDAEWRSWEEEHTFLEVLEGDLLEATTTQAKDKLTLGMFSKLSASAGFREELEKYASS 1029
            M   +FMGPLGKGSWHEWE  H+ +LLG +WYNTSRS+SS  +++R++ +++        W+ KF+RPAETRWMVV D A LL +RW+ V WL  ++AA  L  T F +YW +S  ML DPL+RVH  F+  L +++  WAYNWIRG+GG+F+KG G V  +L PGMRL E ADFS LL+ +LE +R  P+ YF  +L   +TTL EA    FM NF   + GFF E  +RW+KWM+ HQ LP SMAR+ C SF+    +  E A E AVG EFARA L V W  LYE  E R+ E E  +   L  DL   T  + KD+LT G+FS++ +    R ELE+YA+S
Sbjct:    1 MTSVYFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSESSNANFQRWKRVVQQQFPDAKPWLIKFVRPAETRWMVVMDGAKLLCKRWEQVEWLFCEYAARNLNKTTFRNYWLQSAYMLRDPLVRVHVMFTARLGELLFDWAYNWIRGKGGFFLKGEG-VGRQLFPGMRLVEVADFSRLLLVKLETIRKDPKTYFAAVLERVQTTLSEAMAKLFMTNFSE-DKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYE-GEPRT-EREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANS 341          
BLAST of mRNA_C-linearis_contig10.678.1 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 1.150e-92
Identity = 169/346 (48.84%), Postives = 213/346 (61.56%), Query Frame = 1
Query:    1 MECQFFMGPLGKGSWHEWEDHHLVALLGTLWYNTSRSDSSCISWRRFQNLIEGV--KGVTWVCKFIRPAETRWMVVWDAAALLEERWDAVRWLHMDWAASKLLGTPFMDYWYKSLCMLDDPLMRVHAKFSVALRKVVLSWAYNWIRGEGGYFVKGTGGVAERLPPGMRLAEAADFSLLLVKRLEELRAHPRKYFPELLAFAETTLKEAELVH-FMMNFGTGESGFFWEMIERWLKWMDMHQHLPYSMARLACSSFYESKWVGSEEAFEHAVGQEFARALLLVLWPELYEDAEWRSWEEEHTFLEVLEGDLLEATTTQAKDKLTLGMFSKLSASAGFREELEKYASS 1029
            M    FMGPLGKGSWHEWE  H+ +LLG +WYNTSRS+ S  S++R++ ++         W+ KFIRPAETRWMVV D A LL ERW+ V WL  ++AA  L  T F +YW +S CML DPL+RVH  F+  L +++  WAYNWI G+GG+F+KG G V  RL P MRL EAADFS LL+++LE +R  P+ Y   LL    TTL +      F +    G+  F  E  +RW+K M  HQ LP SMAR+ C SFY    +    A E AVG EFARA   V WP LYE  E R+ E E  +   L  DL   T  + KD+LTLG+FS +      R ELE+YA+S
Sbjct:    1 MTSALFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSEPSNASFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGEG-VGRRLFPAMRLVEAADFSCLLLQKLETIRKDPQTYVAALLDRVRTTLSDPMRGESFRVELQRGQF-FIAEFKKRWIKSMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFPHVAWPGLYE-GEPRT-ERERQYRTQLAKDLGGTTEARRKDELTLGLFSCIDGDLSVRSELEQYANS 342          
BLAST of mRNA_C-linearis_contig10.678.1 vs. uniprot
Match: A0A6H5JW26_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW26_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 4.290e-69
Identity = 114/217 (52.53%), Postives = 144/217 (66.36%), Query Frame = 1
Query:    1 MECQFFMGPLGKGSWHEWEDHHLVALLGTLWYNTSRSDSSCISWRRFQNLIEGV--KGVTWVCKFIRPAETRWMVVWDAAALLEERWDAVRWLHMDWAASKLLGTPFMDYWYKSLCMLDDPLMRVHAKFSVALRKVVLSWAYNWIRGEGGYFVKGTGGVAERLPPGMRLAEAADFSLLLVKRLEELRAHPRKYFPELLAFAETTLKEAELVHFMMNF 645
            M    FMGPLGKGSWHEWE  H+ +LLG +WYNTSRS SS   ++R++ ++         W+ KFIRPAETRWMVV D A LL ERW+ V WL  ++AA  L  T F +YW +S CML DPL+RVH  F+  L +++  WAYNWI G+GG+F+KG G V  RL PGMRL E ADFS LL+++LE +   P+ YF  LL    TTL +     FM+NF
Sbjct:    1 MTSALFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSGSSNGKFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGEG-VGRRLSPGMRLVEVADFSRLLLQKLETIHKDPQTYFAALLDRVRTTLSDPMAKVFMLNF 216          
BLAST of mRNA_C-linearis_contig10.678.1 vs. uniprot
Match: A0A6H5L8G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G1_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 4.410e-64
Identity = 126/286 (44.06%), Postives = 161/286 (56.29%), Query Frame = 1
Query:    1 MECQFFMGPLGKGSWHEWEDHHLVALLGTLWYNTSRSDSSCISWRRFQNLIEGVKGVTWVCKFIRPAETRWMVVWDAAALLEERWDAVRWLHMDWAASKLLGTPFMDYWYKSLCMLDDPLMRVHAKFSVALRKVVLSWAYNWIRGEGGYFVKGTGGVAERLPPGMRLAEAADFSLLLVKRLEELRAHPRKYFPELLAFAETTLKEAELVHFMMNFGTGESGFFWEMIERWLKWMDMHQHLPYSMARLACSSFYESKWVGSEEAFEHAVGQEFARALLLVLWPELYE 858
            M   +FMGPLGKGSWHEWE  H+ +LLG +WY+TSRS+SS  ++                                      +RW  V  L  ++AA  L  T F +YW +S  ML +PL+RVH  F+  L +++  WA NWIRG+GG+F+KG G V  RL PGMRL E AD S LL+ +LE +R  P+ YF  +L    TTL E     FM NF   +  FF E  +RW+KWM+ HQ LP SMAR+AC SFY    + ++ A E   G EFARA L V WP LYE
Sbjct:    1 MTSLYFMGPLGKGSWHEWERDHVFSLLGMVWYSTSRSESSNANF--------------------------------------QRWKRVEKLVREYAARYLNKTTFRNYWLQSAYMLRNPLVRVHVVFTARLGELLFDWANNWIRGKGGFFLKGEG-VGRRLFPGMRLVEVADCSRLLLLKLETIRKDPKTYFAAVLERVRTTLSEPMEKLFMTNFSE-DKVFFAEFKKRWIKWMERHQQLPLSMARIACPSFYARTGIMADGAVE---GPEFARAFLHVAWPGLYE 243          
BLAST of mRNA_C-linearis_contig10.678.1 vs. uniprot
Match: A0A6H5JSZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ3_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 2.680e-63
Identity = 105/148 (70.95%), Postives = 121/148 (81.76%), Query Frame = 1
Query:  676 MIERWLKWMDMHQHLPYSMARLACSSFYESKWVGSEEAFEHAVGQEFARALLLVLWPELYEDAEWRSWEEEHTFLEVLEGDLLEATTTQAKDKLTLGMFSKLSASAGFREELEKYASSAHEKR-VVIDVLGENQTARVSGFEMIWNFP 1116
            MI RW  WMDMHQHLPYSMARLACSSF+E KW GSE+AFEHAVGQE+ARA LL LWPELYE AEW  W+EEH +LE+L  DL EA TT+ KD+LT GMFSKL+ASA FR E+E+YA SA EK+ +V+D   ENQ  RVSGF+MIW+FP
Sbjct:    1 MIARWTIWMDMHQHLPYSMARLACSSFFEGKWAGSEKAFEHAVGQEYARASLLALWPELYEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYALSAREKKEIVVDDDAENQAPRVSGFDMIWSFP 148          
BLAST of mRNA_C-linearis_contig10.678.1 vs. uniprot
Match: A0A6H5KH75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH75_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 4.530e-60
Identity = 136/386 (35.23%), Postives = 177/386 (45.85%), Query Frame = 1
Query:    1 MECQFFMGPLGKGSWHEWEDHHLVALLGTLWYNTSRSDSSCISWRRFQNLIEGV--KGVTWVCKFIRPAETRWMVVWDAAALLEERWDAVRWLHMDWAASKL------------------------------LG---------------------------------TPFMDYWYKSLCMLDDPLMRVHAKFSVALRKVVLSWAYNWIRGEGGYFVKGTGGVAERLPPGMRLAEAADFSLLLVKRLEELRAHPRKYFP----------------------------------------------------ELLAFAETTLKEAELVH----------------FMMNFGTGESGFFWEMIERWLKWMDMHQHLPYSMARLACSSFY 759
            M    FMGPLGKGSWHEWE  H+ +LLG +WYNTSRS+SS  +++R++ ++         W+ KFIRPAETRWMVV D A LL ERW+ V WL  ++AA  L                              LG                                 T + +YW +S CML DPL+RVH  F+  L +++  WAYNWI G+GG+F+KG G V  RL PGMRL E ADFS LL+++LE +   P+ YF                                                     E+  F+   L+E E +                 FM+NF   +S FF E+ +RW+KWM  HQ LP SMAR+ C SFY
Sbjct:    1 MTSALFMGPLGKGSWHEWERDHIFSLLGMVWYNTSRSESSNANFQRWKRIVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAAKGSXCERWEQVEWLFCEYAAGNLNKTTYRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKGEG-VGRRLSPGMRLVEVADFSRLLLQKLETIHKDPQTYFXQQGYLAHPGNTFHXXXXXXXXXXXVPHNRTTTWHCYKYIYHGRRLFPGMRSVEVADFSRLLLQELETIRKDPQTYFAALLDRAKLFMLNFSE-DSFFFAEVKKRWIKWMQRHQELPLSMARIGCPSFY 384          
BLAST of mRNA_C-linearis_contig10.678.1 vs. uniprot
Match: A0A6H5JMW8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW8_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 8.900e-60
Identity = 127/272 (46.69%), Postives = 161/272 (59.19%), Query Frame = 1
Query:  214 MVVWDAAALLEERWDAVRWLHMDWAASKLLGTPFMDYWYKSLCMLDDPLMRVHAKFSVALRKVVLSWAYNWIRGEGGYFVKGTGGVAERLPPGMRLAEAADFSLLLVKRLEELRAHPRKYFPELLAFAETTLKEAELVHFMMNFGTGESGFFWEMIERWLKWMDMHQHLPYSMARLACSSFYESKWVGSEEAFEHAVGQEFARALLLVLWPELYEDAEWRSWEEEHTFLEVLEGDLLEATTTQAKDKLTLGMFSKLSASAGFREELEKYASS 1029
            MVV D A LL ERW+ V  L  D+A + L  T   +YW +S  ML DP   VH  F+  L++++  WAYNWI G+GG+F+KG G V  RL PGMRL E ADFS LL+++LE +R  P+ YF  LL     TL +  +  FM+ F   +  FF E  +RW+KWM  HQ LP SMAR+ C SFY    +    A E AVG EFARA L V WP LYE  E R+ E E  +   L  DL   T  + KD+LT G+FS +      R ELE+YA+S
Sbjct:    1 MVVIDGAKLLCERWEQVERLFCDFARN-LNKTTVRNYWVQSAYMLRDPFFHVHVMFTARLKELLFDWAYNWIHGKGGFFLKGEG-VDRRLFPGMRLVEVADFSRLLLQKLETIRKDPKTYFAALLDRVRATLSDPMVKFFMLAFSE-DRVFFAEFKKRWIKWMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFLHVAWPGLYE-GEPRT-EREREYRTQLVKDLGGTTEARRKDELTFGLFSCIDGDLSVRSELEQYANS 267          
BLAST of mRNA_C-linearis_contig10.678.1 vs. uniprot
Match: A0A6H5JQF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF6_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 1.100e-56
Identity = 122/272 (44.85%), Postives = 157/272 (57.72%), Query Frame = 1
Query:  214 MVVWDAAALLEERWDAVRWLHMDWAASKLLGTPFMDYWYKSLCMLDDPLMRVHAKFSVALRKVVLSWAYNWIRGEGGYFVKGTGGVAERLPPGMRLAEAADFSLLLVKRLEELRAHPRKYFPELLAFAETTLKEAELVHFMMNFGTGESGFFWEMIERWLKWMDMHQHLPYSMARLACSSFYESKWVGSEEAFEHAVGQEFARALLLVLWPELYEDAEWRSWEEEHTFLEVLEGDLLEATTTQAKDKLTLGMFSKLSASAGFREELEKYASS 1029
            MV  D A LL +RW+ V WL   +AA  L  T F +YW +S+ +L DP++RVH   +  L +++  WAYNWIRG+GG+F+K   GV  RL PGMRL E ADFS LL+ +LE +R  P  YF     F  T   E             + GFF    +RW+KWM+ HQ LP SMAR+ C SFY    + +E A E AVG +FARA L V WP LY D E R+ E E  F   L     E T  + KD+LT G+FS + +    R ELE+YA+S
Sbjct:    1 MVDTDRAKLLCDRWEQVSWLFCKYAARYLNKTTFRNYWLQSVYLLRDPILRVHVMLTARLGELLFDWAYNWIRGKGGFFLK-CEGVGRRLFPGMRLVEVADFSRLLLLKLETIRKDPETYFAAEKLFT-TNCSE-------------DKGFFALFKKRWIKWMERHQQLPLSMARIGCPSFYARTGIMAEGAVEQAVGPKFARAFLHVAWPGLY-DGEPRT-EREREFRTQLVKYSGEITEARRKDELTFGLFSCIDSDLSVRNELEQYANS 255          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JU73_9PHAE1.360e-17370.83Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN38_9PHAE8.340e-13759.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIQ1_ECTSI2.340e-10149.86Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JI13_9PHAE1.150e-9248.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW26_9PHAE4.290e-6952.53Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L8G1_9PHAE4.410e-6444.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSZ3_9PHAE2.680e-6370.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH75_9PHAE4.530e-6035.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMW8_9PHAE8.900e-6046.69Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JQF6_9PHAE1.100e-5644.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:3794497..3796222 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1403
Cds size1173
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.678.1prot_C-linearis_contig10.678.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig10 3794727..3796222 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927352.7266335-UTR-C-linearis_contig10:3794496..37947261622927352.7266335-UTR-C-linearis_contig10:3794496..3794726Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 3794497..3794726 -
1690879646.764221-UTR-C-linearis_contig10:3794496..37947261690879646.764221-UTR-C-linearis_contig10:3794496..3794726Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 3794497..3794726 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927352.7409935-CDS-C-linearis_contig10:3794726..37952781622927352.7409935-CDS-C-linearis_contig10:3794726..3795278Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 3794727..3795278 -
1690879646.789716-CDS-C-linearis_contig10:3794726..37952781690879646.789716-CDS-C-linearis_contig10:3794726..3795278Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 3794727..3795278 -
1622927352.7521672-CDS-C-linearis_contig10:3795601..37962221622927352.7521672-CDS-C-linearis_contig10:3795601..3796222Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 3795602..3796222 -
1690879646.8038104-CDS-C-linearis_contig10:3795601..37962221690879646.8038104-CDS-C-linearis_contig10:3795601..3796222Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 3795602..3796222 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.678.1

>prot_C-linearis_contig10.678.1 ID=prot_C-linearis_contig10.678.1|Name=mRNA_C-linearis_contig10.678.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=391bp
MECQFFMGPLGKGSWHEWEDHHLVALLGTLWYNTSRSDSSCISWRRFQNL
IEGVKGVTWVCKFIRPAETRWMVVWDAAALLEERWDAVRWLHMDWAASKL
LGTPFMDYWYKSLCMLDDPLMRVHAKFSVALRKVVLSWAYNWIRGEGGYF
VKGTGGVAERLPPGMRLAEAADFSLLLVKRLEELRAHPRKYFPELLAFAE
TTLKEAELVHFMMNFGTGESGFFWEMIERWLKWMDMHQHLPYSMARLACS
SFYESKWVGSEEAFEHAVGQEFARALLLVLWPELYEDAEWRSWEEEHTFL
EVLEGDLLEATTTQAKDKLTLGMFSKLSASAGFREELEKYASSAHEKRVV
IDVLGENQTARVSGFEMIWNFPSSTNGRAMQFILPQFISN*
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mRNA from alignment at C-linearis_contig10:3794497..3796222-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.678.1 ID=mRNA_C-linearis_contig10.678.1|Name=mRNA_C-linearis_contig10.678.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1726bp|location=Sequence derived from alignment at C-linearis_contig10:3794497..3796222- (Chordaria linearis ClinC8C monoicous)
ATGGAGTGCCAGTTTTTCATGGGCCCTCTTGGCAAAGGTTCCTGGCATGA GTGGGAGGACCACCACCTCGTAGCTCTGCTGGGAACTCTTTGGTACAACA CAAGCAGGTCTGATTCGTCTTGCATTTCCTGGCGCCGTTTTCAAAACCTC ATCGAGGGCGTGAAGGGCGTAACCTGGGTGTGCAAGTTCATCAGACCCGC GGAAACACGCTGGATGGTGGTTTGGGATGCGGCCGCCTTGCTTGAAGAGC GTTGGGATGCGGTTAGGTGGCTGCATATGGACTGGGCTGCGTCAAAGCTT CTTGGCACGCCCTTCATGGATTACTGGTACAAGTCGCTCTGCATGTTGGA CGACCCTCTCATGCGAGTACACGCGAAGTTCAGCGTAGCTCTCAGAAAAG TAGTGCTCAGCTGGGCGTACAACTGGATTCGCGGGGAAGGTGGCTACTTC GTCAAGGGTACGGGTGGCGTGGCGGAGCGTCTACCCCCAGGGATGCGGTT GGCGGAGGCAGCTGACTTCTCCCTCCTACTGGTGAAGCGACTCGAGGAGC TTCGAGCGCACCCGAGGAAATATTTTCCAGAGCTGCTCGCCTTCGCCGAA ACGACCCTGAAGGAGGCCGAGGTGGGTCAGGACAAAGCGTTTCTAGGTTG TAGGGTTGACGTGCACCCGCAGTAAAGGGTTGGTTGGACCCGGCGTGCAC GAGCTGCTTCGTCCCTGCTGTCCTGAGCACTCGCAGTCGGCAAGCAGTGC CCGCCCTTTCGTTTGTCACCCAATATTGCTGCCAAAAAAATAAAACCGCC CGCGCTCTCTCTTTCTTTCTGCTAAATGTTTTCCTGCTTTCTTTTTGTGC GCTTCCCTGCCGCCCCCGACGGGCAGCTAATAGCGCCGTCCAAACCTTAC ACCTTGCACCCGTCGACTCCCTCCCCTACTGCCGTATGCTGCAGCTTGTA CATTTCATGATGAACTTTGGAACGGGGGAAAGCGGCTTCTTTTGGGAGAT GATCGAGCGCTGGCTAAAATGGATGGACATGCACCAGCATCTCCCCTACA GCATGGCGAGGTTGGCTTGCAGTTCGTTCTACGAGAGCAAGTGGGTGGGT TCGGAGGAGGCTTTCGAACACGCTGTCGGCCAGGAGTTTGCGCGGGCTTT GCTGCTGGTGCTTTGGCCTGAGCTGTACGAGGACGCGGAGTGGAGGTCGT GGGAGGAGGAACACACGTTTCTCGAAGTGTTGGAGGGTGACCTTTTGGAA GCAACTACCACCCAGGCAAAAGATAAGCTGACACTTGGCATGTTTTCGAA GTTGAGTGCGAGTGCTGGGTTCAGGGAGGAGTTGGAGAAGTATGCCTCAT CTGCGCACGAGAAGAGGGTTGTAATCGACGTGCTTGGCGAGAACCAGACA GCGAGGGTCTCGGGCTTTGAAATGATTTGGAATTTCCCCAGCTCTACGAA TGGGCGTGCCATGCAATTTATTTTGCCCCAATTCATCAGCAACTAGTCGA GAGCGTTTTCTCCACGTACGATACATGCACACAGAAACATGATTCTAGGG AGATTGATATCGTTCGCCTTGGGCAGTTCCGCTCACGCCAGTCTAGGAGA GTAGAGCGATCGAATGCCACCAACGCCGAAGTCCGGAAAGCAGGAGACGA GGCAATAGAAGTTGCGAGGGCGTTGAAAAAGACTGCCTCTCACGCGGTTC CGAATGAGAGGCAGCTTCGAAAACGA
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Coding sequence (CDS) from alignment at C-linearis_contig10:3794497..3796222-

>mRNA_C-linearis_contig10.678.1 ID=mRNA_C-linearis_contig10.678.1|Name=mRNA_C-linearis_contig10.678.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2346bp|location=Sequence derived from alignment at C-linearis_contig10:3794497..3796222- (Chordaria linearis ClinC8C monoicous)
ATGGAGTGCCAGTTTTTCATGGGCCCTCTTGGCAAAGGTTCCTGGCATGA
GTGGGAGGACCACCACCTCGTAGCTCTGCTGGGAACTCTTTGGTACAACA
CAAGCAGGTCTGATTCGTCTTGCATTTCCTGGCGCCGTTTTCAAAACCTC
ATCGAGGGCGTGAAGGGCGTAACCTGGGTGTGCAAGTTCATCAGACCCGC
GGAAACACGCTGGATGGTGGTTTGGGATGCGGCCGCCTTGCTTGAAGAGC
GTTGGGATGCGGTTAGGTGGCTGCATATGGACTGGGCTGCGTCAAAGCTT
CTTGGCACGCCCTTCATGGATTACTGGTACAAGTCGCTCTGCATGTTGGA
CGACCCTCTCATGCGAGTACACGCGAAGTTCAGCGTAGCTCTCAGAAAAG
TAGTGCTCAGCTGGGCGTACAACTGGATTCGCGGGGAAGGTGGCTACTTC
GTCAAGGGTACGGGTGGCGTGGCGGAGCGTCTACCCCCAGGGATGCGGTT
GGCGGAGGCAGCTGACTTCTCCCTCCTACTGGTGAAGCGACTCGAGGAGC
TTCGAGCGCACCCGAGGAAATATTTTCCAGAGCTGCTCGCCTTCGCCGAA
ACGACCCTGAAGGAGGCCGAGATGGAGTGCCAGTTTTTCATGGGCCCTCT
TGGCAAAGGTTCCTGGCATGAGTGGGAGGACCACCACCTCGTAGCTCTGC
TGGGAACTCTTTGGTACAACACAAGCAGGTCTGATTCGTCTTGCATTTCC
TGGCGCCGTTTTCAAAACCTCATCGAGGGCGTGAAGGGCGTAACCTGGGT
GTGCAAGTTCATCAGACCCGCGGAAACACGCTGGATGGTGGTTTGGGATG
CGGCCGCCTTGCTTGAAGAGCGTTGGGATGCGGTTAGGTGGCTGCATATG
GACTGGGCTGCGTCAAAGCTTCTTGGCACGCCCTTCATGGATTACTGGTA
CAAGTCGCTCTGCATGTTGGACGACCCTCTCATGCGAGTACACGCGAAGT
TCAGCGTAGCTCTCAGAAAAGTAGTGCTCAGCTGGGCGTACAACTGGATT
CGCGGGGAAGGTGGCTACTTCGTCAAGGGTACGGGTGGCGTGGCGGAGCG
TCTACCCCCAGGGATGCGGTTGGCGGAGGCAGCTGACTTCTCCCTCCTAC
TGGTGAAGCGACTCGAGGAGCTTCGAGCGCACCCGAGGAAATATTTTCCA
GAGCTGCTCGCCTTCGCCGAAACGACCCTGAAGGAGGCCGAGCTTGTACA
TTTCATGATGAACTTTGGAACGGGGGAAAGCGGCTTCTTTTGGGAGATGA
TCGAGCGCTGGCTAAAATGGATGGACATGCACCAGCATCTCCCCTACAGC
ATGGCGAGGTTGGCTTGCAGTTCGTTCTACGAGAGCAAGTGGGTGGGTTC
GGAGGAGGCTTTCGAACACGCTGTCGGCCAGGAGTTTGCGCGGGCTTTGC
TGCTGGTGCTTTGGCCTGAGCTGTACGAGGACGCGGAGTGGAGGTCGTGG
GAGGAGGAACACACGTTTCTCGAAGTGTTGGAGGGTGACCTTTTGGAAGC
AACTACCACCCAGGCAAAAGATAAGCTGACACTTGGCATGTTTTCGAAGT
TGAGTGCGAGTGCTGGGTTCAGGGAGGAGTTGGAGAAGTATGCCTCATCT
GCGCACGAGAAGAGGGTTGTAATCGACGTGCTTGGCGAGAACCAGACAGC
GAGGGTCTCGGGCTTTGAAATGATTTGGAATTTCCCCAGCTCTACGAATG
GGCGTGCCATGCAATTTATTTTGCCCCAATTCATCAGCAACTAGCTTGTA
CATTTCATGATGAACTTTGGAACGGGGGAAAGCGGCTTCTTTTGGGAGAT
GATCGAGCGCTGGCTAAAATGGATGGACATGCACCAGCATCTCCCCTACA
GCATGGCGAGGTTGGCTTGCAGTTCGTTCTACGAGAGCAAGTGGGTGGGT
TCGGAGGAGGCTTTCGAACACGCTGTCGGCCAGGAGTTTGCGCGGGCTTT
GCTGCTGGTGCTTTGGCCTGAGCTGTACGAGGACGCGGAGTGGAGGTCGT
GGGAGGAGGAACACACGTTTCTCGAAGTGTTGGAGGGTGACCTTTTGGAA
GCAACTACCACCCAGGCAAAAGATAAGCTGACACTTGGCATGTTTTCGAA
GTTGAGTGCGAGTGCTGGGTTCAGGGAGGAGTTGGAGAAGTATGCCTCAT
CTGCGCACGAGAAGAGGGTTGTAATCGACGTGCTTGGCGAGAACCAGACA
GCGAGGGTCTCGGGCTTTGAAATGATTTGGAATTTCCCCAGCTCTACGAA
TGGGCGTGCCATGCAATTTATTTTGCCCCAATTCATCAGCAACTAG
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