mRNA_C-linearis_contig10.665.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.665.1 vs. uniprot
Match: D7FNE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE2_ECTSI) HSP 1 Score: 1244 bits (3219), Expect = 0.000e+0 Identity = 790/1343 (58.82%), Postives = 885/1343 (65.90%), Query Frame = 1
Query: 178 LLAAFTNPDNEVRRRAEAAWEDLKQRLPDEVLENVCAILGR-EGGEAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQERTQIGVKAALLGRLAKEPVAHIRRKLTHAIGQLAGVSAGTAEWPELMTLTVALCDATQQYPEMKVVGLDLVNILAEFCPGMMAPHRAGLLQAWLFSSPKPPLFNKTLLMFGACLDDANIGVRVAALKAACSFLQDALPGPSAAAASSLVPKMMAVLEATVNSGDECAAGDVLEALNVIAANQPLLLLGDP--RSLDMVGSAMLSLAASPTLEDSTRELSLEVITGLCESAPSVLREGGGGIVGAVVPLTINMLAQPPEGHDDEEELGAWLSMADG-GRDDGNGXXXXDDLSMIAASALSRISIALSGQAVLSSAMPVCYEFLQDTSSWRRRKAGLLTLLLIGEGCGEDIANSGILPGIVLGPVLAGMQDEHPRVRYAALACVGQMTEDFGAWDGVSGEGEADGEGSFQGTFHSQLLPVLVESLGGPNANMPRLQAAAAGAIITFCNPERLRAEWLYEPTAPPGSRLGQEAVGLVLLRSLAGLVSSSGSSCVVVREEALTAVGIVSQVLGPGFGSFYGTFVPLAKGIIFAGSTPTGPAAAAAAMPSEDVDVLRGKAMEAIALMGQAVGLEAFREDAHQASSVIRLLLNEQKTVARDPADPQSTYTLQALARMAGVLGEEFLPYLSEAVTPLLAALSTDAEIKLSSAPDANAATREFEAAGLTTMAMDLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAAATLSVVLPNLGPKNAVGVQVVSAALVPRLVGLAARRAEAXXXXXXXXXXXAVEWVREAQAMLDASVDALTEMVSRLGGDSGGXXXXXXXXXXXXXQQEEPVEKGDQERACVVADSLSNLLEGRCSNGGDGAVLRVSDERLLSTVTVLRDVAAASIRRTRTRSAAAXXXXXXLEXXXXXXXXXXXXXXX-------EGEEEMLVSVADATGWMIKGRKAAFLPTFEAVMRPLVLPLLDPTAAVAAS-SHHSLGLCMAIDVLEHTGEGGRRAVLPGPLLPALLRGCREDEPAA-STRQACAYGLGVAADFGGPEFDVHSAEALRLLLALVAQGRAGNAADQAXXXXXXXXDRWENGAVTDNAISAAFRVLFARPGPVGASFSAAPISAVVGSLLDALPINVDVDEAHVCHRRVVDHALSRHELFFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMVRYQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEELWTRQLVDKETRQKAEEVLVGIKGAYPKVFEKAWAGLGEERRRALQTTTADICAR 4167
LL AFT+PDN VRRRAE AWED+K RLPD+VLE VCA+LG+ +GGE GE GLRAMAAVLLRTLFD+RSDVWFRVQ++TQ GVKA LL RL KEPVAHIRRKLTHAIGQLAG+S+ T EWPELM LTVALCDA QQ PEMKVVGLDLVNILAEFCPGMM+PH+ GLLQ MFGA L+D IGVRVAALKAACSFLQD+L GPSAA A SLVP++M+V+EATVN+GDE AAGDVLEALNVIAANQPLLLLG+ ++L+MV +AML+LA SP LE STRELSLEV TGLCE APSVLRE G +V VPLTINMLAQPP+ DDEEELG+WLSM+ G GR D + +LSMIAASALSR+++AL G+AVLSSAMPVC E L D ++WRRRKAGLLTLLLIGE LLP LVESLGGPNANMPRL+AAAAGA+ITFCNPERL AEWLY T PG RLG EAVGL +LRSL+GLV+ GSS VVVREEALTAVG ++ + S + P +D D+LRGKAMEAIALMGQAVGLE FREDAHQ VIRLLLNEQ VARDPA+PQSTYTLQ+LARMAGVL EEFLPYLSEAV PLL ALS +AEIK S+APDA A E EA GLT MA+DLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAA TL+VV+PNLGP+NA+GVQV+S+A+VP+LV LA RA AV A+ + +A QQ++P +V+R+SDERLL TVT LR+VAAASI RTR A XXXXXX XXXXXXXXXXXXXXX +GEEE+LVSV DATGWMIKGRK AFLP FEAVMRPLVL LLDP A A SH S GLCMAIDVLEH GEGGR +V PLLPALL+G R D+PAA STRQACAYGLGVAA+ GG +FD HSAEAL LLLALV + G+ D D W GAV DNA+SAAFRVL RPGPV A+F AVVGSLLD+LPI VDV E VCHRRVVD A +RHELFFG GM+ YQ QEELW RQLVD+ETR+KAEEV+ +K A+ F++AW GLGE RRALQT T+ +C+R
Sbjct: 13 LLGAFTSPDNGVRRRAEEAWEDMKMRLPDQVLEQVCAVLGQADGGEGGE--GLRAMAAVLLRTLFDIRSDVWFRVQQQTQAGVKATLLDRLTKEPVAHIRRKLTHAIGQLAGISSATGEWPELMALTVALCDAAQQSPEMKVVGLDLVNILAEFCPGMMSPHQDGLLQ-----------------MFGASLEDPTIGVRVAALKAACSFLQDSLSGPSAAVAPSLVPRIMSVVEATVNAGDESAAGDVLEALNVIAANQPLLLLGESGDQTLEMVSTAMLTLAGSPALETSTRELSLEVFTGLCECAPSVLRERGATVVNVAVPLTINMLAQPPQDFDDEEELGSWLSMSGGNGRGDEDADAEGGELSMIAASALSRMAVALGGKAVLSSAMPVCSELLGDATNWRRRKAGLLTLLLIGE-----------------------------------------------------------------------LLPTLVESLGGPNANMPRLEAAAAGALITFCNPERLSAEWLYAAT--PG-RLGGEAVGLAMLRSLSGLVT--GSSSVVVREEALTAVGCAAREIL----SATAXXXXXXXXXXXXXAAP------------QDTDLLRGKAMEAIALMGQAVGLEVFREDAHQ---VIRLLLNEQGMVARDPANPQSTYTLQSLARMAGVLVEEFLPYLSEAVKPLLVALSINAEIKHSNAPDAALAKDELEAEGLTAMAVDLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAAETLAVVIPNLGPRNAIGVQVISSAIVPKLVALAEGRAA-----------EAVAAGAGAKEVQEA-------------------------------QQQKP------------------------------SVIRLSDERLLKTVTGLRNVAAASIGRTRAALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGEEELLVSVVDATGWMIKGRKEAFLPAFEAVMRPLVLQLLDPAAPAAVPPSHRSFGLCMAIDVLEHCGEGGRNSVFQAPLLPALLQGARGDDPAAASTRQACAYGLGVAAELGGQDFDAHSAEALGLLLALVRKDPGGDNDDD---------DGWGEGAVRDNAVSAAFRVLIHRPGPVFAAFP----PAVVGSLLDSLPITVDVAEGQVCHRRVVDLAFARHELFFGGGGDGTFHAAAVVPKLVTAIA--------GMMEYQSRGAGGDGYGS------------------------------QEELWERQLVDRETREKAEEVVAVVKTAFAGGFQRAWEGLGEAGRRALQTPTSSVCSR 1118
BLAST of mRNA_C-linearis_contig10.665.1 vs. uniprot
Match: D8LD05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD05_ECTSI) HSP 1 Score: 1181 bits (3056), Expect = 0.000e+0 Identity = 768/977 (78.61%), Postives = 807/977 (82.60%), Query Frame = 1
Query: 1324 VLSSAMPVCYEFLQDTSSWRRRKAGLLTLLLIGEGCGEDIANSGILPGIVLGPVLAGMQDEHPRVRYAALACVGQMTEDFGAWDGVSGEGEADGEGSFQGTFHSQLLPVLVESLGGPNANMPRLQAAAAGAIITFCNPERLRAEWLYEPTAPPGSRLGQEAVGLVLLRSLAGLVSSSGSSCVVVREEALTAVGIVSQVLGPGFGSFYGTFVPLAKGIIFAGSTPTGPAAAAAAMPSEDVDVLRGKAMEAIALMGQAVGLEAFREDAHQASSVIRLLLNEQK-TVARDPADPQSTYTLQALARMAGVLGEEFLPYLSEAVTPLLAALSTDAEIKLSSAPDANAATREFEAAGLTTMAMDLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAAATLSVVLPNLGPKNAVGVQVVSAALVPRLVGLAARRAEAXXXXXXXXXXXAVEWVREAQAMLDASVDALTEMVSRLGGDSGGXXXXXXXXXXXXXQQEEPVEKGDQERACVVADSLSNLLEGRCSNGGDGA--VLRVSDERLLSTVTVLRDVAAASIRRTRTRSAAAXXXXXXLEXXXXXXXXXXXXXXXE----GEEEMLVSVADATGWMIKGRKAAFLPTFEAVMRPLVLPLLDPTAAVAA---SSHHSLGLCMAIDVLEHTGEGGRRAVLPGPLLPALLRGCREDEPAASTRQACAYGLGVAADFGGPEFDVHSAEALRLLLALVAQGRAGNAADQAXXXXXXXX-------------------DRWENGAVTDNAISAAFRVLFARPGPVGASFSAAPISAVVGSLLDALPINVDVDEAHVCHRRVVDHALSRHELFFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMVRYQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEELWTRQLVDKETRQKAEEVLVGIKGAYPKVFEKAWAGLGEERRRALQTTTADICAR 4167
+LSS MP+C EF+QD SSWRRRKAGLL+L LIGEG GED+A SGILP IVLGPVLAGMQDEHPRVR AAL+C + E + A D EGSFQ F +LLPVLVESLGGPNANMPRLQAAAA AI TFC+PERLRAEWL EP PPGSRLGQEAVGLVLLRSL GLV SGSSCV VREEA A+G+V QVLGP FGSFYGTFVPLAK IIFAG+TPTGPAAAAAA PSED+D +RGKA+EAIALMGQAVGL+ FREDAHQ VIRLLLNEQK TV RDPA+PQSTYT QALARMAGVLGEEFLPYLSEAVTPLLAALST AE+KLS APDA+AAT EFE AGLT M MDLRG G QVFGVN SLMQAKESACK LYQYTEDLGEGFAPHAAAT+SVVLPNLGP+N V VQVVSAALVPRLVGLAARRAEAXXXXXXXXXXXAVEW EAQAMLDASVDALTEMVSRLGG+S XXXXXXXXXXX QQEE EKGDQE ACVVADSLSNLLEGRCS+GGDGA VLRVSDERLLSTVTVLRDVAAASIRRTR+ AA XXXXXX XXXXXXXXXXXXXXX GEEEMLVSVADATGWMI+GRKAAFLPTFEAV+RPLVLPLLD TAA AA SSH S L +AIDVLE GEGGRRAV P PLLPALL+GCREDE AAS RQ CAYGLGVAADFGGPEFD HSAEALRLLLALVAQGR G+ A A XXXX DRWENGA+TDNAISAAFRVLFARPGPV A+F+A P+S VGSLLDALPI VDV+EAHVCHRRVVDHALSRHELFFGXXXXXXXXXXXXXXXXXXXXXXXX GMVRYQP XXXXXXXXXXXXX +EELW RQLVDKETRQKAEEVLV I+G YPKVFE+AWAGLGEE RRALQTTTA+ICAR
Sbjct: 1 MLSSVMPMCSEFVQDISSWRRRKAGLLSLFLIGEGSGEDLAGSGILPEIVLGPVLAGMQDEHPRVRNAALSCAEHILE-YPAPD----------EGSFQEAFRGELLPVLVESLGGPNANMPRLQAAAASAITTFCDPERLRAEWLDEPAGPPGSRLGQEAVGLVLLRSLEGLVPPSGSSCVAVREEAWAALGVVCQVLGPEFGSFYGTFVPLAKEIIFAGATPTGPAAAAAATPSEDMDAVRGKAVEAIALMGQAVGLDLFREDAHQ---VIRLLLNEQKKTVERDPANPQSTYTFQALARMAGVLGEEFLPYLSEAVTPLLAALSTAAEMKLSDAPDADAATLEFEDAGLTAMTMDLRGAGPQVFGVNNSLMQAKESACKALYQYTEDLGEGFAPHAAATMSVVLPNLGPQNPVAVQVVSAALVPRLVGLAARRAEAXXXXXXXXXXXAVEWACEAQAMLDASVDALTEMVSRLGGESX-XXXXXXXXXXXSAQQEELFEKGDQEPACVVADSLSNLLEGRCSDGGDGAAGVLRVSDERLLSTVTVLRDVAAASIRRTRSLLAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEEMLVSVADATGWMIRGRKAAFLPTFEAVLRPLVLPLLDSTAAAAAALPSSHRSFALSIAIDVLELAGEGGRRAVFPEPLLPALLQGCREDELAASARQVCAYGLGVAADFGGPEFDPHSAEALRLLLALVAQGRGGSTAGPAQEEDXXXXXXXXXXXXXXXXXXXXXXXDRWENGALTDNAISAAFRVLFARPGPVDAAFAAVPMSGFVGSLLDALPIVVDVEEAHVCHRRVVDHALSRHELFFGXXXXXXXXXXXXXXXXXXXXXXXXALA--GMVRYQPSPEXXXXXXXXXXXXXLLPSYGRSGGGYGAGDP-------EEELWARQLVDKETRQKAEEVLVRIEGEYPKVFEEAWAGLGEESRRALQTTTAEICAR 953
BLAST of mRNA_C-linearis_contig10.665.1 vs. uniprot
Match: A0A6H5JCW6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW6_9PHAE) HSP 1 Score: 613 bits (1580), Expect = 7.200e-201 Identity = 334/462 (72.29%), Postives = 375/462 (81.17%), Query Frame = 1
Query: 265 EVLENVCAILGR-EGGEAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQERTQIGVKAALLGRLAKEPVAHIRRKLTHAIGQLAGVSAGTAEWPELMTLTVALCDATQQYPEMKVVGLDLVNILAEFCPGMMAPHRAGLLQAWLFSSPKPPLFNKTLLMFGACLDDANIGVRVAALKAACSFLQDALPGPSAAAASSLVPKMMAVLEATVNSGDECAAGDVLEALNVIAANQPLLLLGDP--RSLDMVGSAMLSLAASPTLEDSTRELSLEVITGLCESAPSVLREGGGGIVGAVVPLTINMLAQPPEGHDDEEELGAWLSMADG-GRDDGNGXXXXDDLSMIAASALSRISIALSGQAVLSSAMPVCYEFLQDTSSWRRRKAGLLTLLLIGEGCGEDIANSGILPGIVLGPVLAGMQDEHPRVRYAALACVGQMTEDFGAWDGVSGEGEADGEGSFQGTFHSQ 1638
+VLE VCA+LG+ +GGE GE GLRAMAAVLLRTLFD+RSDVWFRVQ+ TQ GVKA LL RL KEPVAHIRRKLTHAIGQLAG+S+ T EWPELM LTVALCDA QQ PEMK+VGLDLVNILAEFCPGMM+PH+ GLLQ MFGA L+D IGVRVAALKAACSFLQD+L SAA A SLVP++M+V+EATVNSGDE AAGDVLEALNVIA+NQPLLLLG+ ++L+MV +AML+LA SPTLE STRELSLEV TGLCE APSVLRE G +V VPLTINMLAQPP+ DDEEELG+WLSM+ G GR D + +LSMIAASALSR+++AL G+AVLSSAMPVC E L D ++WRRRKAGLLTLLLIGEGCGED+A SG+LPGIVLGPVLAGMQDEHPRVRYAAL+CVGQMT+DFG WDG SFQG FH+Q
Sbjct: 47 QVLEQVCAVLGQADGGEVGE--GLRAMAAVLLRTLFDIRSDVWFRVQQETQAGVKATLLDRLTKEPVAHIRRKLTHAIGQLAGISSATGEWPELMALTVALCDAAQQSPEMKIVGLDLVNILAEFCPGMMSPHQDGLLQ-----------------MFGASLEDPTIGVRVAALKAACSFLQDSL---SAAVAPSLVPRIMSVVEATVNSGDEAAAGDVLEALNVIASNQPLLLLGESGDQTLEMVSTAMLTLAGSPTLETSTRELSLEVFTGLCECAPSVLRERGATVVNVAVPLTINMLAQPPQDFDDEEELGSWLSMSGGSGRGDDDADAEGGELSMIAASALSRMAVALGGKAVLSSAMPVCSELLGDATNWRRRKAGLLTLLLIGEGCGEDLAESGLLPGIVLGPVLAGMQDEHPRVRYAALSCVGQMTQDFGDWDG-GXXXXXXXXXSFQGAFHAQ 485
BLAST of mRNA_C-linearis_contig10.665.1 vs. uniprot
Match: A0A6H5JBE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE6_9PHAE) HSP 1 Score: 588 bits (1516), Expect = 9.110e-190 Identity = 394/656 (60.06%), Postives = 442/656 (67.38%), Query Frame = 1
Query: 2227 MAGVLGEEFLPYLSEAVTPLLAALSTDAEIKLSSAPDANAATREFEAAGLTTMAMDLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAAATLSVVLPNLGPKNAVGVQVVSAALVPRLVGLAARRAEAXXXXXXXXXXXAVEWVREAQAMLDASVDALTEMVSRLGGDSGGXXXXXXXXXXXXXQQEEPVEKGDQERACVVADSLSNLLEGRCSNGGDG---AVLRVSDERLLSTVTVLRDVAAASIRRTRTRSAAAXXXXXXLEXXXXXXXXXXXXXXX----EGEEEMLVSVADATGWMIKGRKAAFLPTFEAVMRPLVLPLLDPTAAVAAS-SHHSLGLCMAIDVLEHTGEGGRRAVLPGPLLPALLRGCREDEPAA-STRQACAYGLGVAADFGGPEFDVHSAEALRLLLALVAQGRAGNAADQAXXXXXXXXDRWENGAVTDNAISAAFRVLFARPGPVGASFSAAPISAVVGSLLDALPINVDVDEAHVCHRRVVDHALSRHELFFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMVRYQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEELWTRQLVDKETRQKAEEVLVGIKGAYPKVFEKAWAGLGEERRRALQTTTADICAR 4167
MAGVL EEFLPYLSEAV PLL ALS +AEIK S+APDA A E EA GLT MA+DLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAA TL+VV+PNLGP+NA+GVQV+S+A+VP+LV LA RRA + V+EAQAMLDA+VDALTE RL G SG XXXXXXXXX E P+E+ DQER CV AD+LS+LLEGRC G G +V+R+SDERLL TVT LR+VAAASI RTR A XXXXXX XXXXXXXXXXXXXXX +GEEE+LVSV DATGWMIKGRK FLP FEAVMRPLV+ LLDP A A SH S GLCMAIDVLEH GEGGR +V PLLPALL+G R D+PAA STRQACAYGLGVAA+ GG +FD HSAEAL LLLAL + + D D W GAV DNA+SAAFRVL RPGPV A+F AVVGSLLD+LPI VDV E VCHRRVVD A +RHELFFG GM+ YQ QEELW RQLVD+ETR+KAEEV+ +K +P F++AW GLGE +RALQ T+ +C+R
Sbjct: 1 MAGVLVEEFLPYLSEAVKPLLVALSINAEIKHSNAPDATLAKDELEAEGLTAMAVDLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAAETLAVVIPNLGPRNAIGVQVISSAIVPKLVALAERRAA-----EAVAAGAGAKEVQEAQAMLDAAVDALTE---RLSGGSGNDCAQXXXXXXXXXXXE-PLERRDQERQCVAADALSDLLEGRCGGGTQGQKPSVIRLSDERLLKTVTGLRNVAAASIGRTRAALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGEEELLVSVVDATGWMIKGRKETFLPAFEAVMRPLVVQLLDPAAVAAVPPSHRSFGLCMAIDVLEHCGEGGRNSVFQAPLLPALLQGARGDDPAAASTRQACAYGLGVAAELGGQDFDAHSAEALGLLLALARKDPGDDNDDD---------DGWGEGAVRDNAVSAAFRVLIHRPGPVFAAFP----PAVVGSLLDSLPITVDVAEGQVCHRRVVDLAFARHELFFGGGGDGALHAAAVVPKLVTAMA--------GMMEYQSRGNGGDGYGS------------------------------QEELWERQLVDRETREKAEEVVALVKAVFPGEFQRAWEGLGEAGQRALQMPTSSVCSR 596
BLAST of mRNA_C-linearis_contig10.665.1 vs. uniprot
Match: A0A835ZDS9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS9_9STRA) HSP 1 Score: 423 bits (1088), Expect = 5.100e-120 Identity = 348/997 (34.90%), Postives = 450/997 (45.14%), Query Frame = 1
Query: 166 QLESLLAAFTNPDNEVRRRAEAAWEDLKQRLPDEVLENVCAILGREGGEAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQERTQIGVKAALLGRLAKEPVAHIRRKLTHAIGQLAGVSAGTAE---------WPELMTLTVALC-DATQQYPEMKVVGLDLVNILAEFCPGMMAPHRAGLLQAWLFSSPKPPLFNKTLLMFGACLDDANIGVRVAALKAACSFLQ----------------------------------------------------------------------------------------------------DALPGPSAAAASSLVPKMMAVLEATVNSGDECAAGDVLEALNVIAANQPLLLLGDPRSLDMVGSAMLSLAASPTLEDSTRELSLEVITGLCESAPSVLREGGGGIVGAVVPLTINMLAQPPEGHDDEEELGAWLSMADG-------GRDDGNGXXXXDDLSMIAASALSRISIALSGQAVLSSAMPVCYEFLQDTSSWRRRKAGLLTLLLIGEGCGEDIANSGILPGIVLGPVLAGMQDEHPRVRYAALACVGQMTEDFGAWDGVSGEGEADGEGSFQGTFHSQLLPVLVESLGGPNANMPRLQAAAAGAIITFCNPERLRAEWLYEPTAPPGSRLGQEAVGLVLLRSLAGLVSSSGSSC--VVVREEALTAVGIVSQVLGPGFGSFYGTFVPLAKGIIFAGSTPTGPAAAAAAM--------------------PSEDVDVLRGKAMEAIALMGQA----------------------------------------VGLEAFREDAHQASSVIRLLLNEQKTVARDPADPQSTYTLQALARMAGVLGEEFLPYLSEAVTPLLAALSTDAEIKLSSAPDA----NAATREFEAAGLTTMAMDLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAAATLSVVLPNLGPKNAVGVQVVSAALVPRL 2607
+LE LLAAF DNE RR AE W +K+ PD V E +C IL G G+RAM+AVLLRTLF +RSD W+R+Q RTQ V+ LL + +EPV HIR K+ HAIGQLA ++ G+ + WPEL+ L ALC ++ E GL LV+ L E+ G++APH L T + A + VRVAAL+A S LQ D L +AAA + LVP M+AV+EA GDE AA L+AL IA +P L P A+ AAS L +TR+ +LE++ LCESAP +R G V A+VPL ++MLAQ E D +E W AD G + NG D++S IAA+AL RI++AL G AVLS+A P+ GC + L G+V V +D HPRVRY +GQM+ DF E DG +FQ FH+Q+LPVL +++G NA +PRLQAAAA + FC+PE R W P AP LL SL G++ S G REEALTAV ++QVLGPGF FY K ++ A PS +L GKA+EA+ALM QA VGLE FR DAH +V++ L++ Q A P D Q+ ++L A AR+A VL EF PYL V PL+AALS D+ ++L APDA ++A A G+T + ++RG+G QV G+NT+ MQ K+ A + LYQYT DLG AP A L VLP L NA GV+VVSAA+VP+L
Sbjct: 6 ELEGLLAAFMGLDNEARRAAEERWASIKKSAPDGVAEGLCMILSSTGETQPAYEGIRAMSAVLLRTLFGIRSDFWYRLQPRTQYAVREVLLRSVMEEPVRHIRLKVVHAIGQLASIAFGSRDGGGGGAAGGWPELLPLVTALCAHGDARHLE---AGLMLVDKLCEYAHGLLAPHAPAL----------------TAIFAAALAHAESAPVRVAALRATASLLQARSGSLAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALWTPILLPLKDPKLERHGSRINASPRRRYLLSSGWRDLNDDLTPAAAAAMAPLVPPMLAVVEAAARGGDEDAACAGLDALRAIADERPAALR--PHLEAAARCALALAAASAQLRVATRQQALELLVALCESAPGAVRRSGA--VAAIVPLVLDMLAQVEEDEDSDEV--EWAQRADPSPWSIERGDQEENGDEDDDEVSNIAATALDRIALALGGAAVLSAASPL--------------------------GCAAALYPQ--LGGVVPPVVARAARDVHPRVRYQLYHALGQMSADFS-------EPPEDGP-NFQALFHAQVLPVLADAVGAANAGLPRLQAAAAATLTHFCHPEHCRVSWAL-PYAP------------ALLTSLLGVIRSQGGGAGHTAAREEALTAVAQLAQVLGPGFVPFYAPMADAVKALMAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRG-GLLHGKALEALALMEQAMADPQPYPTTTDALPPAPQXXXXXXXXXXXXXXXXXXXXAVGLELFRADAH---AVLQALVSTQG--ALQPGDVQAPFSLMACARIAAVLRAEFRPYLPHVVPPLVAALSVDSAVRLLDAPDAALPSSSAXXXXAAQGVTAVECEVRGLGTQVLGINTAAMQEKKVALQVLYQYTADLGADMAPFARTLLEAVLPGLERANAAGVRVVSAAVVPKL 922
BLAST of mRNA_C-linearis_contig10.665.1 vs. uniprot
Match: H3GNL8_PHYRM (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3GNL8_PHYRM) HSP 1 Score: 394 bits (1013), Expect = 3.510e-112 Identity = 337/1108 (30.42%), Postives = 529/1108 (47.74%), Query Frame = 1
Query: 175 SLLAAFTNPDNEVRRRAEAAWEDLKQRLPDEVLENVCAILGREGGEAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQERTQIGVKAALLGRLAKEPVAHIRRKLTHAIGQLAGVSAGTAE-WPELMTLTVALCDATQQYPEMKVVGLDLVNILAEFCPGMMAPHRAGLLQAWLFSSPKPPLFNKTLLMFGACLDDANIGVRVAALKAACSFLQDALPGPSAAAASSLVPKMMAVLEATVNSGDECAAGDVLEALNVIAANQPLLLLGDPRSLDMVGSAMLSLAASPTLEDSTRELSLEVITGLCESAPSVLREGGGGIVGAVVPLTINMLAQPPEGHDDEEELGAWLSMADGGRDDGNGXXXXDDLSMIAASALSRISIALSGQAVLSSAMPVCYEFLQDTSSWRRRKAGLLTLLLIGEGCGEDIANSGILPGIVLGPVLAGMQDEHPRVRYAALACVGQMTEDFGAWDGVSGEGEADGEGSFQGTFHSQLLPVLVESLGGPNANMPRLQAAAAGAIITFCNPERLRAEWLYEPTAPPGSRLGQEAVGLVLLRSLAGLVSSSGSSCVVVREEALTAVGIVSQVLGPGFGSFYGTFVPLAKGIIFAGSTPTGPAAAAAAMPSEDVDVLRGKAMEAIALMGQAVGLEAFREDAHQASSVIRLLLNEQKTVARDPADPQSTYTLQALARMAGVLGEEFLPYLSEAVTPLLAALSTDAEIKLSSAPDANAATREFEAAGLTTMAMDLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAAATLSVVLPNLGPKNAVGVQVVSAALVPRLVGLAARRAEAXXXXXXXXXXXAVEWVREAQAMLDASVDALTEMVSRLGGDSGGXXXXXXXXXXXXXQQEEPVEKGDQERA---CV--VADSLSNLLEGRCSNGGDGAVLRVSDERLLSTVTVLRDVAAASIRRTRTRSAAAXXXXXXLEXXXXXXXXXXXXXXXEGEEEMLVSVADATGWMIKGRKAAFLPTFEAVMRPLVLPLLDPTAAVAASSHHSLGLCMAIDVLEHTGEGGRRAVLPGPL-LPALLRGCREDEPAASTRQACAYGLGVAADFGGPEFDVHSAEALRLLLALV 3477
+L+AA + DN R++AEA++ K P ++ N+ +L A RA A VLLR L +V++ V+ ++ Q +K LL +A EPVAHIRRKL H I +LA VSA + WPEL++ AL T ++V DL+ LAE+ ++APH+ L +F L+DAN V++A+LKAA +FL +A + ++ M+ +++ V+SG+E A +VL AL IA P +LD V AM+ + +S L+ TREL+LE + LCE+A ++R+ IV ++VPL I ++ + EE W+ D + +S A+A+ R+S +L G AVL A+PV FL D + WR+R+AGL + L+GEG + L +V G VL + D+HPRV+YAAL +GQ+ EDFG E + +FQ FH+ ++P L + + R +A AA +I FCN +A+ + AP L L L ++ S V+E+A+TAV V++V+G F FY F+PLAK ++ ++ +LRGK+ME+IAL+GQAVG E F DA + ++ +L+ Q + + P+ Y Q+ R+ +L E+F+PYL + L+ +I+LS D + A G TM +++RGVG++ +NTS ++ K +AC LYQ DL F P+ A V++P + + +++VS+ + +L L+ +VD + G + EP+ KG QE C+ A+++S +LE + G + + + + V V + VA+ S +R T+ + E EE + S+ D+ GW++K +K AF P F A + V PLL+ +CM D++EH G + V PL L L++G ++P+AS QA AYG+GV+A+ GP FD AL L+ L+
Sbjct: 5 ALVAALMSNDNATRKQAEASYAAFKAEQPQTLVANLVQLL-----RAAPEPEARAFAPVLLRPLLEVKAGVYTQLDATAQATLKGQLLEAVASEPVAHIRRKLGHLIAELAAVSAKFEQPWPELLSAVSAL--TTNADALLRVTAFDLLAQLAEYVGELLAPHKESF-----------------LTLFTNALNDANGEVQIASLKAAAAFLLTLEDKQELSAFAIIITPMLRIIQVLVSSGEEVAFREVLSALVQIAEVHPKFFRN---ALDDVARAMIFVCSSQELDVETRELALEFLISLCENAGGMVRKSQ-FIVTSLVPLVIQLMCEV-------EEDETWVQKFDDPETFTEANDADNSISDAGAAAIDRLSTSLGGNAVLPVAIPVIKGFLGD-ADWRKRRAGLYAICLLGEGAKALMTRE--LDNVV-GMVLPFLNDQHPRVQYAALHSIGQIAEDFG---------EVEKGKNFQAKFHAVVVPALTALIQNEQGVL-RTRALAASVVINFCNTNVCKAKHV----APYSQAL------------LEALFNAMRSCPRQVQEQAITAVASVAKVIGDEFLRFYDIFIPLAKEVLTNAH-------------GKEYSLLRGKSMESIALIGQAVGKERFVNDAKE---IMEILVRVQSS--EELEGPEVQYVAQSCVRIGSILKEDFVPYLPHVIPALIKQAQIQPDIQLSDVADDDVEEDGQTADGKDTMTLEIRGVGKKRLEINTSALEDKTNACNMLYQSALDLEGWFYPYVAEVAQVMIPLIDFEYVEDIRIVSSLTMAKL--------------------------------LNCAVDGTM--------NHGHGATAPQFPQQLFEKFFEPMLKGLQEEEDLECLGAFAEAMSAVLEVCKESQEKGFQVGIPLDHVPRVVEVFKKVASNSAQRLMTQHQENQQ-----DEDYDAEAALQQTENDELEEGVFRSMVDSIGWIVKIQKEAFFPVFHAHLLTFVTPLLEQKTVPMLRGQ---AICMIDDIIEHCGTAAQELV---PLFLNHLVQGL--EDPSASVIQASAYGIGVSAEKCGPAFDPFCQNALEKLVNLI 976
BLAST of mRNA_C-linearis_contig10.665.1 vs. uniprot
Match: A0A225WVM2_9STRA (Importin n=4 Tax=Phytophthora TaxID=4783 RepID=A0A225WVM2_9STRA) HSP 1 Score: 392 bits (1006), Expect = 4.670e-111 Identity = 344/1126 (30.55%), Postives = 532/1126 (47.25%), Query Frame = 1
Query: 175 SLLAAFTNPDNEVRRRAEAAWEDLKQRLPDEVLENVCAILGREGGEAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQERTQIGVKAALLGRLAKEPVAHIRRKLTHAIGQLAGVSAGTAE-WPELMTLTVALCDATQQYPEMKVVGLDLVNILAEFCPGMMAPHRAGLLQAWLFSSPKPPLFNKTLLMFGACLDDANIGVRVAALKAACSFLQDALPGPSAAAASSLVPKMMAVLEATVNSGDECAAGDVLEALNVIAANQPLLLLGDPRSLDMVGSAMLSLAASPTLEDSTRELSLEVITGLCESAPSVLREGGGGIVGAVVPLTINMLAQPPEGHDDEEELGAWLSMADGGRDDGNGXXXXDDLSMIAASALSRISIALSGQAVLSSAMPVCYEFLQDTSSWRRRKAGLLTLLLIGEGCGEDIANSGILPGIVLGPVLAGMQDEHPRVRYAALACVGQMTEDFGAWDGVSGEGEADGEGSFQGTFHSQLLPVLVESLGGPNANMPRLQAAAAGAIITFCNPERLRAEWLYEPTAPPGSRLGQEAVGLVLLRSLAGLVSSSGSSCVVVREEALTAVGIVSQVLGPGFGSFYGTFVPLAKGIIFAGSTPTGPAAAAAAMPSEDVDVLRGKAMEAIALMGQAVGLEAFREDAHQASSVIRLLLNEQKTVARDPADPQSTYTLQALARMAGVLGEEFLPYLSEAVTPLLAALSTDAEIKLSSAPDANAATREFEAAGLTTMAMDLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAAATLSVVLPNLGPKNAVGVQVVSAALVPRLVGLAARRAEAXXXXXXXXXXXAVEWVREAQAMLDASVDALTEMVSRLGGDSGGXXXXXXXXXXXXXQQEEPVEKGDQERA---CV--VADSLSNLLEGRCSNGGDGAVLRVSDERLLSTVTVLRDVAAASIRRTRTRSAAAXXXXXXLEXXXXXXXXXXXXXXXEGEEEMLVSVADATGWMIKGRKAAFLPTFEAVMRPLVLPLLDPTAAVAASSHHSLGLCMAIDVLEHTGEGGRRAVLPGPL-LPALLRGCREDEPAASTRQACAYGLGVAADFGGPEFDVHSAEALRLLLAL------VAQGRAGNAADQA 3513
+L+AA + DN R++AEA++E K P ++ N+ +L A RA A VLLR L +V++ V+ ++ Q +KA LL +A EPVAHIRRKL H I +LA +S + WPEL++ AL T ++V DL+ L E+ ++APH+ L +F L+DAN V++A+LKAA +FL +A + ++ M+ ++E VNSGDE A +VL AL IA P SLD + AM+ + +S L+ TREL+LE + LCE+A ++R+ IV VVPL I ++ E DDE W+ D + +S A+A+ R+S +L G AVL A+PV FL D + WR+R+AGL L+GEG + L +V G VL + D+HPRV+YAAL +GQ+ EDFG E + +FQ FH+ ++P L + + R +A AA +I FCN +A+++ P S+ LL +L + S V+E+A+TAV V++V+G F FY F+PLAK ++ ++ +LRGK+ME+IAL+GQAVG E F DA + ++ +L+ Q + + P+ Y Q+ R+ +L E+F+PYL + L+ +I+LS D + A G TM +++RGVG++ +NTS ++ K +AC LYQ DL F P+ A V++P + + +++VS+ + +L L+ +VD + G + EP+ KG QE C+ A+++S +LE + G + + E + V + + VA+ S +R T+ + + EE + S+ D+ GW++K +K AF P F+A + V PLL+ +CM D++EH G + V PL L L++G + P S QA AYG+GV+A+ G FD +L L+ L VA G A D A
Sbjct: 5 ALVAALMSNDNATRKQAEASYEAFKAEQPQTLVANLVQLL-----RAAPEPEARAFAPVLLRPLLEVKAGVYTKLDVAAQATLKAQLLEAVATEPVAHIRRKLGHLIAELAAISEKFEQPWPELLSAVSAL--TTHADALLRVTAFDLLAKLGEYVGELLAPHKESF-----------------LTLFTNSLNDANGEVQIASLKAASAFLLTLEDKQELSAFAIIIAPMLRIIEVLVNSGDEVAFREVLSALVQIAEVHPKFFRN---SLDDMARAMIFVCSSQELDSETRELALEFLISLCENAGGMVRKSQ-FIVMNVVPLVIQLMC---EVEDDE----TWVQKFDDPETFTEANDADNSISDAGAAAIDRLSSSLGGNAVLPVAIPVIKGFLGD-ADWRKRRAGLYATCLLGEGAKSLMTRE--LDNVV-GMVLPFLNDQHPRVQYAALHSIGQIAEDFG---------EVEKGKNFQAKFHAVVVPGLTALIQNEQGVL-RTRALAASVVINFCNTNVCKAKYVS-----PYSQ--------ALLEALFNAMRSCPRQ---VQEQAITAVASVAKVIGDEFLRFYDIFIPLAKEVLTNAH-------------GKEYSLLRGKSMESIALIGQAVGKERFVNDAKE---IMEILVRVQSS--EELEGPEVQYVAQSCVRIGSILKEDFVPYLPHVIPSLVKQAQIQPDIQLSDVADDDVEEDGQTADGKDTMTLEIRGVGKKRLEINTSALEDKANACNMLYQSALDLEGWFYPYVAEVAQVMIPLIDFEYVEDIRIVSSLTMAKL--------------------------------LNCAVDGTL--------NHGHGATAPQFPQQLFEKFFEPMLKGLQEEEDLECLGAFAEAMSAVLEVCKESQDKGFQVGIPLEHVPRIVEIFKTVASNSAQRLLTQQ-----HENEQDEDYDAEAALQQTENDDLEEGVFRSMIDSIGWIVKYQKEAFFPVFQAHLLTFVTPLLEQKTVPMLRGQ---AICMIDDIIEHCGAAAQELV---PLFLNHLVQGLEDQSP--SVIQASAYGIGVSAEKCGAAFDPFCQNSLEKLVHLINVSANVADDEVGAARDNA 994
BLAST of mRNA_C-linearis_contig10.665.1 vs. uniprot
Match: A0A0P1ARM1_PLAHL (Importin-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARM1_PLAHL) HSP 1 Score: 380 bits (976), Expect = 2.690e-107 Identity = 333/1105 (30.14%), Postives = 521/1105 (47.15%), Query Frame = 1
Query: 202 DNEVRRRAEAAWEDLKQRLPDEVLENVCAILGREGGEAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQERTQIGVKAALLGRLAKEPVAHIRRKLTHAIGQLAGVSAGTAE-WPELMTLTVALCDATQQYPEMKVVGLDLVNILAEFCPGMMAPHRAGLLQAWLFSSPKPPLFNKTLLMFGACLDDANIGVRVAALKAACSFLQDALPGPSAAAASSLVPKMMAVLEATVNSGDECAAGDVLEALNVIAANQPLLLLGDPRSLDMVGSAMLSLAASPTLEDSTRELSLEVITGLCESAPSVLREGGGGIVGAVVPLTINMLAQPPEGHDDEEELGAWLSMADGGRDDGNGXXXXDDLSMIAASALSRISIALSGQAVLSSAMPVCYEFLQDTSSWRRRKAGLLTLLLIGEGCGE----DIANSGILPGIVLGPVLAGMQDEHPRVRYAALACVGQMTEDFGAWDGVSGEGEADGEGSFQGTFHSQLLPVLVESLGGPNANMPRLQAAAAGAIITFCNPERLRAEWL--YEPTAPPGSRLGQEAVGLVLLRSLAGLVSSSGSSCVVVREEALTAVGIVSQVLGPGFGSFYGTFVPLAKGIIFAGSTPTGPAAAAAAMPSEDVDVLRGKAMEAIALMGQAVGLEAFREDAHQASSVIRLLLNEQKTVARDPADPQSTYTLQALARMAGVLGEEFLPYLSEAVTPLLAALSTDAEIKLSSAPDANAATREFEAAGLTTMAMDLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAAATLSVVLPNLGPKNAVGVQVVSAALVPRLVGLAARRAEAXXXXXXXXXXXAVEWVREAQAMLDASVDALTEMVSRLGGDSGGXXXXXXXXXXXXXQQEEPVEKGDQERA---CV--VADSLSNLLEGRCSNGGDGAVLRVSDERLLSTVTVLRDVAAASIRRTRTRSAAAXXXXXXLEXXXXXXXXXXXXXXXEGEEEMLVSVADATGWMIKGRKAAFLPTFEAVMRPLVLPLLDPTAAVAASSHHSLGLCMAIDVLEHTGEGGRRAVLPGPL-LPALLRGCREDEPAASTRQACAYGLGVAADFGGPEFDVHSAEALRLLLALV 3477
DNE R++AE+++E LK P ++ N+ +L R E EA RA A VLLR L +V+++++ ++ Q +K LL + EPVAHIRRKL H I LA +S + WPEL++ L T +++V DL+ LAE+ ++APH+ L +F L+D N V++A+LKAA +FL A + ++P M+ ++EA VN+G+E +VL +L IA P LD V AM+ + +S LE TREL+LE I LCE+A ++R+ IV VVPL + ++ + EE W+ D D +S +++A+ R+S +L G AVL A+PV FL++ + WR+R+A L + L+GEG +I N V+ VL + D+HPRV+YAAL +GQ+ +DFG E + +FQ FH+ ++P L + M R +A AA +I FCN +A+++ Y T LL +L + S V+E+A+TAV V++V+G F +Y F+PLAK ++ ++ +LRGK+ME+IAL+GQAVG E F DA + ++ + + ++ P+ Y Q+ R+ G+L E+F+PYL + L+ +I+L + +A G TM +++RGVG++ VNTS ++ K +AC LYQ DL F P+ A V++P + + V++VS+ + +L L+ +VD + G + EP+ KG QE C+ A+++S LLE + G + V E + V +L+ VA+ S +R A L+ E EE + S+ D+ GW+IK +K AF P F + + V PLL+ +CM DV+EH G + + PL L L++G + P S QA AYG+GV+A+ G FD AL L+ ++
Sbjct: 4 DNEARQQAESSYEALKAEQPQTLVANLVHLL-RTAPEP-EA---RAFAPVLLRPLLEVKAEIYTQLDTSAQNTLKTQLLEAVVHEPVAHIRRKLDHLIAGLAAISCKLDQPWPELLSTVSELTTHTDA--QLRVTAFDLLAKLAEYVGDVLAPHKENF-----------------LTLFTNALNDGNGEVQIASLKAASAFLLTLEDKQELLAFTIIIPPMLRIIEALVNAGEEATFREVLSSLVQIAETHPKFFR---TLLDDVARAMVFVCSSQELESETRELALEFIISLCENAGGMVRKSQ-YIVTNVVPLVLQLMCEV-------EEDETWIHKFDDPETFTETSDADDSISDASSAAIDRLSSSLGGNAVLPVAIPVITTFLKN-ADWRKRRAALYAICLLGEGAKSLMTREIDN-------VVNMVLPFLNDQHPRVQYAALHSIGQLADDFG---------EVEKGKNFQAKFHTAVVPALTTLIQNEQVVM-RTRALAASVVINFCNTNVCKAKYVTPYSQT---------------LLEALFHAMRSCPRQ---VQEQAITAVASVAKVIGDEFLRYYDIFIPLAKEVLTNAH-------------GKEYALLRGKSMESIALIGQAVGKERFVNDAREIMEILIRVRSSEELEG-----PEVQYVAQSCVRIGGILKEDFVPYLPHVIPALIKQAKIQPDIQLFDIAEGDAEKDGQTVDGKDTMTLEIRGVGKKRLDVNTSALEDKTNACNMLYQSASDLEGYFYPYVAEVAQVMIPLIDFEYVEDVRIVSSLTMAKL--------------------------------LNCAVDGTL--------NHGHSAIAPQFPQQLFEKCFEPMLKGLQEEEDLECLGAFAEAMSALLEVCKESQDKGFSVGVPIEHVPRVVGILKTVASNSAQRL-----MAQHRENQLDEDYDAEAALQQTENDELEEGVFRSMIDSIGWIIKIQKEAFFPVFHSHLLMFVKPLLEQKVVPMLRGQ---AICMIDDVIEHCGAAAQELL---PLFLDHLVQGLEDQNP--SVIQASAYGIGVSAEKCGGAFDPFCQNALEKLVHVI 966
BLAST of mRNA_C-linearis_contig10.665.1 vs. uniprot
Match: M4B1E7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1E7_HYAAE) HSP 1 Score: 371 bits (952), Expect = 4.230e-104 Identity = 324/1095 (29.59%), Postives = 516/1095 (47.12%), Query Frame = 1
Query: 202 DNEVRRRAEAAWEDLKQRLPDEVLENVCAILGREGGEAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQERTQIGVKAALLGRLAKEPVAHIRRKLTHAIGQLAGVS-AGTAEWPELMTLTVALCDATQQYPEMKVVGLDLVNILAEFCPGMMAPHRAGLLQAWLFSSPKPPLFNKTLLMFGACLDDANIGVRVAALKAACSFLQDALPGPSAAAASSLVPKMMAVLEATVNSGDECAAGDVLEALNVIAANQPLLLLGDPRSLDMVGSAMLSLAASPTLEDSTRELSLEVITGLCESAPSVLREGGGGIVGAVVPLTINMLAQPPEGHDDEEELGAWLSMADGGRDDGNGXXXXDDLSMIAASALSRISIALSGQAVLSSAMPVCYEFLQDTSSWRRRKAGLLTLLLIGEGCGEDIANSGILPGIVLGPVLAGMQDEHPRVRYAALACVGQMTEDFGAWDGVSGEGEADGEGSFQGTFHSQLLPVLVESLGGPNANMPRLQAAAAGAIITFCNPERLRAEWLYEPTAPPGSRLGQEAVGLVLLRSLAGLVSSSGSSCVVVREEALTAVGIVSQVLGPGFGSFYGTFVPLAKGIIFAGSTPTGPAAAAAAMPSEDVDVLRGKAMEAIALMGQAVGLEAFREDAHQASSVIRLLLNEQKTVARDPADPQSTYTLQALARMAGVLGEEFLPYLSEAVTPLLAALSTDAEIKLSSAPDANAATREFEAAGLTTMAMDLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAAATLSVVLPNLGPKNAVGVQVVSAALVPRLVGLAARRAEAXXXXXXXXXXXAVEWVREAQAMLDASVDALTEMVSRLGGDSGGXXXXXXXXXXXXXQQEEPVEKGDQERACVVADSLSNLLEGRCSNGGDGAVLRVSDERLLSTVTVLRDVAAASIRRTRTRSAAAXXXXXXLEXXXXXXXXXXXXXXXEGEEEMLVSVADATGWMIKGRKAAFLPTFEAVMRPLVLPLLDPTAAVAASSHHSLGLCMAIDVLEHTGEGGRRAVLPGPLLPALLRGCRE--DEPAASTRQACAYGLGVAADFGGPEFDVHSAEALRLLLALV 3477
DN R+ EA++E LK P ++ ++ +L R E RA A+VLLR L +V++ V+ ++ TQ +K LL +A EP+A IRRKL H I +LA VS WPEL++ L T +++V LDL+ LAE+ ++APH+ L +F L+D++ V++A++KAA +FL A + +V M+ ++EA V +GD+ A +VL AL IA P +L+ V AM+ + +S LE TREL+LE + LCE+A ++R+ IV VVPL I ++ + EE W+ D + + A+A+ R+S +L G AVL A+PV F+ D + WR+R+AGL + L+GEG + L +V VL + D+HPRV+YAAL +GQ+ EDFG E + +FQ F++ ++P L + G + R +A AA II FCN +A+++ P SR LL +L + S V+E+A+TAV V++V+G F FY F+PLAK ++ ++ +LRGK+ME+IAL+GQAVG E F DA + ++ +L+ Q + + P+ Y Q+ AR+ +L E+F+PYL + PL+ +I+L D + G TM +D+RGVG++ +NTS ++ K +AC LYQ DL F P+ A V++P L + +++VS+ + +L+ A AV R Q + + + + + + + + E A+++S +LE + G + V + + V V + VA++S +R + + E EE + S+ D+ GW++K +K AF P F+ + V PLLD +CM D++EH G + LLP L + ++P+ S QA AYG+GV+A+ G FD AL ++ L+
Sbjct: 4 DNATRKATEASYEALKAEQPQLLVIHLVQLL-RTASEPET----RAFASVLLRPLLEVKAGVYPQLDAATQTVLKTQLLEAVASEPMAPIRRKLGHLIAELAAVSDKHNHPWPELLSAVSVL--TTNSDAQLRVTALDLLAKLAEYAGDLLAPHKTSF-----------------LTLFTTALNDSDSDVQIASVKAASAFLLTLEDKQELMAFTVVVAPMLRIIEALVQTGDQLAFREVLSALVQIAEVHPKFFRD---ALNDVARAMIFICSSQELESETRELALEFLISLCENAGGMVRKSQ-FIVTNVVPLVIQLMCEV-------EEDDMWMQNFDDPETFAEANDEDNSIGDAGAAAIDRLSTSLGGNAVLPVAIPVIKAFVGD-ADWRKRRAGLYAICLLGEGAKSLMTRE--LDNVVA-MVLPYLNDQHPRVQYAALHSIGQLAEDFG---------EVEKGKNFQAKFYAVVMPALTALIQGEQLVL-RTRALAASVIINFCNTNVCKAKYVT-----PYSR--------ALLEALFNTMRSCPRQ---VQEQAITAVASVAKVIGDEFLCFYDIFIPLAKEVLTNAH-------------GKEYALLRGKSMESIALIGQAVGKERFVNDAME---IMEILVRVQSS--EELEGPEVQYVAQSCARIGSILKEDFVPYLPFVIPPLIRQAQIQPDIQLLDVADDSVEEDGVTIDGKDTMTLDIRGVGKKRLEINTSALEDKTNACNMLYQSALDLEGHFYPYVAEVAQVMIPLLEFEYVSDIRIVSSLTMAKLLKCAV-------DGTLNHGPGAVA-PRFPQQLFEQFFEPMLTSLQK---------------------------EDELECLSAFAEAMSAVLEVCKDSQEMGFQVGVPLDHVPRVVEVFKTVASSSAQRLTMQHQENQQ-----DEDYDAEAALQQTENDELEEGVFRSMVDSIGWIVKIQKDAFFPVFKTHLLSFVTPLLDQKTMPMLRGQ---AICMIDDIIEHCGGSAQE------LLPLFLNQLVQSLEDPSPSVVQAAAYGIGVSAEKCGAAFDPFCQNALEKMVQLI 966
BLAST of mRNA_C-linearis_contig10.665.1 vs. uniprot
Match: A0A2P4XEL9_9STRA (Importin-like protein (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XEL9_9STRA) HSP 1 Score: 357 bits (917), Expect = 1.110e-102 Identity = 271/816 (33.21%), Postives = 417/816 (51.10%), Query Frame = 1
Query: 175 SLLAAFTNPDNEVRRRAEAAWEDLKQRLPDEVLENVCAILGREGGEAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQERTQIGVKAALLGRLAKEPVAHIRRKLTHAIGQLAGVSAGTAE-WPELMTLTVALCDATQQYPEMKVVGLDLVNILAEFCPGMMAPHRAGLLQAWLFSSPKPPLFNKTLLMFGACLDDANIGVRVAALKAACSFLQDALPGPSAAAASSLVPKMMAVLEATVNSGDECAAGDVLEALNVIAANQPLLLLGDPRSLDMVGSAMLSLAASPTLEDSTRELSLEVITGLCESAPSVLREGGGGIVGAVVPLTINMLAQPPEGHDDEEELGAWLSMADGGRDDGNGXXXXDDLSMIAASALSRISIALSGQAVLSSAMPVCYEFLQDTSSWRRRKAGLLTLLLIGEGCGEDIANSGILPGIVLGPVLAGMQDEHPRVRYAALACVGQMTEDFGAWDGVSGEGEADGEGSFQGTFHSQLLPVLVESLGGPNANMPRLQAAAAGAIITFCNPERLRAEWLYEPTAPPGSRLGQEAVGLVLLRSLAGLVSSSGSSCVVVREEALTAVGIVSQVLGPGFGSFYGTFVPLAKGIIFAGSTPTGPAAAAAAMPSEDVDVLRGKAMEAIALMGQAVGLEAFREDAHQASSVIRLLLNEQKTVARDPADPQSTYTLQALARMAGVLGEEFLPYLSEAVTPLLAALSTDAEIKLSSAPDANAATREFEAAGLTTMAMDLRGVGRQVFGVNTSLMQAKESACKTLYQYTEDLGEGFAPHAAATLSVVLPNLGPKNAVGVQVVSAALVPRLVGLA 2619
+L+AA + DN R++AEA++E K P ++ N+ +L A RA A VLLR L +V++ V+ ++ Q +KA LL +A EPVAHIRRKL H I +LA +S + WPEL+ AL T ++V DL+ LAE+ ++APH+ L +F L+DAN V++A+LKAA +FL +A + ++ M+ ++E VNSGDE A +VL AL IA P SLD V AM+ + +S L+ TREL+LE + LCE+A ++R+ IV VVPL I ++ + EE W+ D + +S A+A+ R+S +L G AVL A+PV FL D + WR+R+AGL L+GEG + L +V G VL + D+HPRV+YAAL +GQ+ EDFG E + +FQ FH+ ++P L + + R +A AA +I FCN +A+++ P S+ LL +L + S V+E+A+TAV V++V+G F FY F+PLAK ++ ++ +LRGK+ME+IAL+GQAVG E F DA + ++ +L+ Q + + P+ Y Q+ R+ +L E+F+PYL + L+ +I+LS D + A G TM +++RGVG++ +NTS ++ K +AC LYQ DL F P+ A V++P + + +++VS+ + +L+ A
Sbjct: 5 ALVAALMSNDNATRKQAEASYEAFKAEQPQTLVANLVQLL-----RAAPEPEARAFAPVLLRPLLEVKAGVYTQLDAAAQATLKAQLLEAVATEPVAHIRRKLGHLIAELAAISEKFEQPWPELLNAVSAL--TTNADALLRVTAFDLLAKLAEYVGNLLAPHKESF-----------------LTLFTNSLNDANGEVQIASLKAASAFLLTLEDKQELSAFAIIIGPMLRIIEVLVNSGDEVAFREVLSALVQIAEVHPKFFRN---SLDDVARAMIFVCSSQELDSETRELALEFLISLCENAGGMVRKSQ-FIVTNVVPLVIQLMCEV-------EEDETWVQKFDDPETFTEANDADNSISDAGAAAIDRLSTSLGGNAVLPVAIPVIKGFLGD-ADWRKRRAGLYATCLLGEGAKSLMTRE--LDNVV-GMVLPFLNDQHPRVQYAALHSIGQIAEDFG---------EVEKGKNFQAKFHAVVVPALTALIQNEQGVL-RTRALAASVVINFCNTNVCKAKYVS-----PYSQ--------ALLEALFNAMRSCPRQ---VQEQAITAVASVAKVIGDEFLRFYDIFIPLAKEVLTNAH-------------GKEYALLRGKSMESIALIGQAVGKERFVNDAKE---IMEILVRVQSS--EELEGPEVQYVAQSCVRIGSILKEDFVPYLPHVIPSLIKQAQIQPDIQLSDVADDDVEEDGQTADGKDTMTLEIRGVGKKRLEINTSALEDKTNACNMLYQSALDLEGWFYPYVAEVAQVMIPLIDFEYVEDIRIVSSLTMAKLLNCA 737 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.665.1 >prot_C-linearis_contig10.665.1 ID=prot_C-linearis_contig10.665.1|Name=mRNA_C-linearis_contig10.665.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1347bp MASARVSAGVPQQLESLLAAFTNPDNEVRRRAEAAWEDLKQRLPDEVLENback to top mRNA from alignment at C-linearis_contig10:3499269..3512155- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.665.1 ID=mRNA_C-linearis_contig10.665.1|Name=mRNA_C-linearis_contig10.665.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=12887bp|location=Sequence derived from alignment at C-linearis_contig10:3499269..3512155- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:3499269..3512155- >mRNA_C-linearis_contig10.665.1 ID=mRNA_C-linearis_contig10.665.1|Name=mRNA_C-linearis_contig10.665.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=8082bp|location=Sequence derived from alignment at C-linearis_contig10:3499269..3512155- (Chordaria linearis ClinC8C monoicous)back to top |