mRNA_C-linearis_contig10.621.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.621.1 vs. uniprot
Match: D7G8S4_ECTSI (Serine O-acetyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8S4_ECTSI) HSP 1 Score: 531 bits (1369), Expect = 6.430e-181 Identity = 288/432 (66.67%), Postives = 318/432 (73.61%), Query Frame = 3 Query: 204 HGRVTSSRARAGFIAAGVGGSLHPPPAPAEAWASASARRWFLPGTTDLTAFSPPLVR--PRVDSKRHKHVTSTRSGARPDHDD--------IAPVATRKSGVDINVEPRPAAGXXXXXXXXXXXXXXXSNDSEVESLVELVKLLHSSDNPIWELVRFEGREASKQSHVSSMIHGSVLARTSLEDAVSCDVANKMATTFLSPTEVRCLLTDMYADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRDRQNLARYLQSICSEVCAADIHPAARIGKGILMASGCDIVIGETAVVGDGVCLLHGVTLGGTGNQTGDRHPKVGKGCHVGAGSSILGNIPLGEGSRIEAASVVVKPTKPYTINRGVPSQTVGWIVCDPYQVGAGGAEEGARTEGGDDGGDAVKPRRVFSNFGSLYIGV 1469
H R +SSR A G G AW+SAS W P L+R V S R + AR DHDD A ++ +DI +PR + G D V SLV+LVKLL S+NP+WELVRFEGREASKQSHVSSM+HGSVLARTSLEDAVSCDVA+KMATTFLSPTEVR L++DMYADEP LDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLM+WLWRRDR NLARYLQSICSEVCAADIHPA+ IGKGILMA GCDIVIGETA+VGDGVC+L GVTLGGTGNQTG+RHPKVGKGCH+G GSSILGNIPLGEGSRIEAASVVVKP KPYTINRGVPS+TV W+VCDP+Q A G EEGA E G++ VKPRR+FSN+GSLY+GV
Sbjct: 41 HSRRSSSRTAALIAGPGAG---------TRAWSSASVSSW------------PWLLRGGQGVRSTRSSEQRLIIANARTDHDDDVAEAGTSTAAGSSTSGSIDIKAKPRWSGGTAVEGRGDGSGGGGERQDPRVHSLVDLVKLLEVSENPLWELVRFEGREASKQSHVSSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEVCAADIHPASTIGKGILMAGGCDIVIGETAMVGDGVCILQGVTLGGTGNQTGNRHPKVGKGCHIGVGSSILGNIPLGEGSRIEAASVVVKPIKPYTINRGVPSKTVAWVVCDPHQDVAVGVEEGAAEEEGEERTPTVKPRRLFSNYGSLYMGV 451
BLAST of mRNA_C-linearis_contig10.621.1 vs. uniprot
Match: A0A835ZGB2_9STRA (Serine O-acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGB2_9STRA) HSP 1 Score: 271 bits (693), Expect = 2.860e-82 Identity = 135/251 (53.78%), Postives = 185/251 (73.71%), Query Frame = 3 Query: 624 IWELVRFEGREASKQSH-VSSMIHGSVLARTSLEDAVSCDVANKMATTFLSPTEVRCLLTDMYADEPFLDFVVAEDLLAHAMQDTSL-PDVLTAMLFHKGFTALTTYRLMHWLWRRDRQNLARYLQSICSEVCAADIHPAARIGKGILMASGCDIVIGETAVVGDGVCLLHGVTLGGTGNQTGDRHPKVGKGCHVGAGSSILGNIPLGEGSRIEAASVVVKPTKPYTINRGVPSQTVGWIVCDPYQVGAGG 1370
+W ++ EGR A Q +S+M+H +VL+ L DAV+ +ANK+AT F+ EV ++T+M+ +P ++ ++A D+LAHA++D+ D+L+ +LFHKGF AL TYRL HWLW++ R+ LAR+ QS+ SEVCAADIHPA+RIG+GI +ASGCD+VIGETAVVG+ V + GVTLGGTG + GDRHPKV G +G +S+LGNI +GEG+ + + SVVVK PYT N+GVPS+ GW+VCD V AGG
Sbjct: 11 LWTVICVEGRVACAQDQDISAMLHSNVLSHDRLADAVTVLLANKLATPFIGAMEVGTIMTEMFEADPEVEEIMAADILAHALRDSDDGTDLLSVLLFHKGFHALATYRLAHWLWQQGRRQLARFFQSVNSEVCAADIHPASRIGRGIFLASGCDVVIGETAVVGNNVIIHSGVTLGGTGKERGDRHPKVADGVQIGVSASVLGNIKVGEGAHVGSCSVVVKEILPYTANKGVPSKLAGWLVCD---VEAGG 258
BLAST of mRNA_C-linearis_contig10.621.1 vs. uniprot
Match: A0A7J7IBC7_9RHOD (Serine O-acetyltransferase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IBC7_9RHOD) HSP 1 Score: 221 bits (563), Expect = 1.230e-61 Identity = 118/255 (46.27%), Postives = 173/255 (67.84%), Query Frame = 3 Query: 573 VESLVELVKLLHSSDNPIWELVRFEGR-EASKQSHVSSMIHGSVLARTSLEDAVSCDVANKMATTFLSPTEVRCLLTD-MYADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRDRQNLARYLQSICSEVCAADIHPAARIGKGILMASGCDIVIGETAVVGDGVCLLHGVTLGGTGNQTGDRHPKVGKGCHVGAGSSILGNIPLGEGSRIEAASVVVKPTKPYTINRGVPSQTVG 1331
V S+ ++V+ L S +P+WEL+R E A + ++S ++ +VL LED ++ +AN++A+ F T+ L D +Y +E + + + A DLLA +D ++ + ++++KGF AL YRL HWLWR+DR+ LA +LQS S+ A DIHPAARIG G+L+ IVIGETAVVGD V +LH VTLGGTG + GDRHPKVG+G +GAG+++LGNI +G+G++I A+SVV+K PY I GVP++ +G
Sbjct: 103 VISVEDMVRTLTYSTDPVWELIRREAEIGAGNEPQLASSLYATVLNHRCLEDTLAFHLANELASPFFQATQYVKLFRDALYQEESYREAIRA-DLLAVVRRDPAMKHCVAVLMYNKGFAALQAYRLAHWLWRQDRKVLALFLQSEISKSFAVDIHPAARIGSGVLVDHATGIVIGETAVVGDDVSMLHNVTLGGTGKEAGDRHPKVGRGVLLGAGATVLGNIRIGDGAQITASSVVLKDVAPYAIVSGVPAREIG 356
BLAST of mRNA_C-linearis_contig10.621.1 vs. uniprot
Match: R7QQT4_CHOCR (Serine O-acetyltransferase n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QQT4_CHOCR) HSP 1 Score: 216 bits (551), Expect = 3.310e-60 Identity = 113/259 (43.63%), Postives = 166/259 (64.09%), Query Frame = 3 Query: 588 ELVKLLHSSDNPIWELVRFEGREASK-QSHVSSMIHGSVLARTSLEDAVSCDVANKMATTFLSPTEVRCLLTDMYADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRDRQNLARYLQSICSEVCAADIHPAARIGKGILMASGCDIVIGETAVVGDGVCLLHGVTLGGTGNQTGDRHPKVGKGCHVGAGSSILGNIPLGEGSRIEAASVVVKPTKPYTINRGVPSQTVGWIVCDPYQVG 1361
E+ + LH +++P+WEL++ E A+ + ++S ++ ++L ++E+ +S + N + T+ T+ L D +D+P V D+ A +D + +L+ KGF AL ++RL HWLW+++R++LA YLQS+ S A DIHPAA IGKGIL+ G IVIGETA +GD V +LH VTLGGTG +TGDRHPKVG G +GAG++ILGNI +G G+ I A SVV+KP P+ I GVP + VG + Y+ G
Sbjct: 81 EMTQSLHGTEDPLWELMKREASTAAADEPQLASSLYANILVHDTMEETLSTVLGNALDTSTFQATQWMELFGDALSDDPEYGKAVRADVTAFMDRDPATSHAARVLLYSKGFHALESWRLAHWLWKKERRSLALYLQSMISSCFAVDIHPAATIGKGILIDHGTGIVIGETATLGDNVSMLHNVTLGGTGKETGDRHPKVGDGVMIGAGATILGNITVGTGAHIAACSVVLKPVDPFAIISGVPGKMVGKVT---YKAG 336
BLAST of mRNA_C-linearis_contig10.621.1 vs. uniprot
Match: A0A125YG49_CYAM1 (Serine O-acetyltransferase n=2 Tax=Cyanidioschyzon merolae TaxID=45157 RepID=A0A125YG49_CYAM1) HSP 1 Score: 215 bits (547), Expect = 2.230e-59 Identity = 117/255 (45.88%), Postives = 173/255 (67.84%), Query Frame = 3 Query: 573 VESLVELVKLLHSSDNPIWELVRFEGR-EASKQSHVSSMIHGSVLARTSLEDAVSCDVANKMATTFLSPTEVRCLLTD-MYADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRDRQNLARYLQSICSEVCAADIHPAARIGKGILMASGCDIVIGETAVVGDGVCLLHGVTLGGTGNQTGDRHPKVGKGCHVGAGSSILGNIPLGEGSRIEAASVVVKPTKPYTINRGVPSQTVG 1331
V S+ ++V+ L S +P+WELVR E A+ + ++S ++ +VL LED ++ +AN++A+ F T+ L D +Y D+ + + + A DLLA +D ++ + +++ KG+ AL YRL H LWR+DR+ LA +LQS S+ A DIHPAARIG G+++ IVIGETAVVG+ V +LH VTLGGTG + GDRHPKVG+G +GAG+++LGNI +G+G++I A+SVV+K PYTI GVP++ VG
Sbjct: 100 VISVDDMVRTLTYSSDPVWELVRREAEIGAANEPQLASSLYATVLNHRCLEDTLAFHLANELASPFFQATQYVKLFRDALYQDKSYREAIRA-DLLAVVRRDPAMKHCVAVLMYSKGYAALQAYRLAHLLWRQDRKVLALFLQSEISKCFAVDIHPAARIGSGVMIDHATGIVIGETAVVGNDVSMLHNVTLGGTGKEAGDRHPKVGRGVLLGAGATVLGNIRIGDGAQITASSVVLKDVPPYTIVSGVPAREVG 353
BLAST of mRNA_C-linearis_contig10.621.1 vs. uniprot
Match: M2WVZ1_GALSU (Serine O-acetyltransferase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WVZ1_GALSU) HSP 1 Score: 209 bits (531), Expect = 8.990e-58 Identity = 111/259 (42.86%), Postives = 163/259 (62.93%), Query Frame = 3 Query: 588 ELVKLLHSSDNPIWELVRFEGR-EASKQSHVSSMIHGSVLARTSLEDAVSCDVANKMATTFLSPTEVRCLLTDMYADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRDRQNLARYLQSICSEVCAADIHPAARIGKGILMASGCDIVIGETAVVGDGVCLLHGVTLGGTGNQTGDRHPKVGKGCHVGAGSSILGNIPLGEGSRIEAASVVVKPTKPYTINRGVPSQTVGWIVCDPYQVG 1361
EL + L +D+P+WEL+R E A + H++S + VL +LEDA+S +A+K+ + + T+ LL + D + +DL+A +D + + A+LF KGF AL YRL +WLW R R+ LA YLQS+ S+ A DIHPAA+IG G+ + +VIGETA VG+ V +LH VTLGGTG +TGDRHPK+ G +GAG+++LGNI +G G+ + A SVV+K +P+ + GVP++ +G + YQ G
Sbjct: 51 ELARSLREADDPLWELIRREAEIGARNEPHLASTLFAIVLNHRTLEDALSFHLASKLESGYFQATQWMELLREAMNDSELYRNAIRKDLMAVTTRDPATQHAIQALLFSKGFHALECYRLANWLWERGRRPLALYLQSLVSKSFAVDIHPAAKIGSGVFIDHATGVVIGETATVGNHVSMLHNVTLGGTGKETGDRHPKIRDGVLLGAGATVLGNIVVGRGAYVSACSVVLKSVEPFMVVSGVPAKVIGILT---YQQG 306
BLAST of mRNA_C-linearis_contig10.621.1 vs. uniprot
Match: A0A2W5NBU4_RHOSU (Serine acetyltransferase n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A2W5NBU4_RHOSU) HSP 1 Score: 206 bits (524), Expect = 1.050e-57 Identity = 111/246 (45.12%), Postives = 158/246 (64.23%), Query Frame = 3 Query: 609 SSDNPIWELVRFEGREASKQSHV-SSMIHGSVLARTSLEDAVSCDVANKMATTFLSPTEVRCLLTDMYADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRDRQNLARYLQSICSEVCAADIHPAARIGKGILMASGCDIVIGETAVVGDGVCLLHGVTLGGTGNQTGDRHPKVGKGCHVGAGSSILGNIPLGEGSRIEAASVVVKPTKPYTINRGVPSQTVGWIVC 1343
+S +P+W ++R E + ++ + +S++H VL TSLE A+S VA K+A++ +S +R + + YA EP L D++A +D + + +LF KGF AL YRL HWLW + RQ++A ++Q SEV DIHP AR+G+GIL+ IVIGETAVVGD V +LH VTLGGTG + GDRHPK+G G +GAG+++LGNI +G SR+ A SVV++P P GVP++ VG C
Sbjct: 9 ASLDPVWAMIRREAEDVTRNEPLMASLVHVGVLYHTSLERALSYRVAQKLASSDMSDLILREIADEAYAAEPSLGTAARADIMAVYERDPACHRYIQPLLFFKGFQALQCYRLGHWLWTQGRQDMAYFVQMRTSEVFGVDIHPNARMGQGILIDHAHSIVIGETAVVGDNVSMLHSVTLGGTGKEDGDRHPKIGNGVLIGAGAAVLGNITIGSCSRVAAGSVVLEPVPPCKTVAGVPARIVGDAGC 254
BLAST of mRNA_C-linearis_contig10.621.1 vs. uniprot
Match: A0A8D5WKG3_9PROT (Serine acetyltransferase n=1 Tax=Alphaproteobacteria bacterium SO-S41 TaxID=2829083 RepID=A0A8D5WKG3_9PROT) HSP 1 Score: 203 bits (516), Expect = 1.710e-56 Identity = 111/244 (45.49%), Postives = 151/244 (61.89%), Query Frame = 3 Query: 618 NPIWELVRFEGRE-ASKQSHVSSMIHGSVLARTSLEDAVSCDVANKMATTFLSPTEVRCLLTDMYADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRDRQNLARYLQSICSEVCAADIHPAARIGKGILMASGCDIVIGETAVVGDGVCLLHGVTLGGTGNQTGDRHPKVGKGCHVGAGSSILGNIPLGEGSRIEAASVVVKPTKPYTINRGVPSQTVGWIVCD 1346
+P+W +R E A + ++S +HGS+LA LEDA+S +ANK+A S ++R +A P + V DL A +D + + LF KGF AL +YR+ HWLW+ +R +A Y Q+ SEV ADIHPAARIG+G+ + +VIGETAVV D V +LHGVTLGG+G + GDRHPKV KG +GA ++ILGNI +GE SR+ A SVV++P GVP++ VG CD
Sbjct: 12 DPVWSSLRAEAESIAVSEPALASFVHGSILAHARLEDALSFHLANKLANADTSAMKIRDTFQAAFAAAPEIGQAVRADLSAIRDRDPASRGFVQPFLFFKGFQALQSYRIAHWLWKSNRTWMAMYFQNRISEVFGADIHPAARIGRGVFIDHATGVVIGETAVVEDDVSMLHGVTLGGSGKERGDRHPKVRKGVMIGASATILGNIEVGEYSRVGAGSVVLQPVPANCTVAGVPAKVVGCAGCD 255
BLAST of mRNA_C-linearis_contig10.621.1 vs. uniprot
Match: UPI00110E12D4 (serine O-acetyltransferase n=2 Tax=Ruegeria TaxID=97050 RepID=UPI00110E12D4) HSP 1 Score: 202 bits (515), Expect = 1.990e-56 Identity = 105/244 (43.03%), Postives = 154/244 (63.11%), Query Frame = 3 Query: 618 NPIWELVRFEGREA-SKQSHVSSMIHGSVLARTSLEDAVSCDVANKMATTFLSPTEVRCLLTDMYADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRDRQNLARYLQSICSEVCAADIHPAARIGKGILMASGCDIVIGETAVVGDGVCLLHGVTLGGTGNQTGDRHPKVGKGCHVGAGSSILGNIPLGEGSRIEAASVVVKPTKPYTINRGVPSQTVGWIVCD 1346
+P+W+ + E + A K+ + ++H +L SL+ A+S +A K+ + +S +R ++ + YAD+P L DL+A +D + +L +L+ KG+ A+ YR+ HWLW+R R +LA + Q CSE+ DIHPAARIGKGI++ IVIGETAVVGD V +LH VTLGGTG + DRHPK+G G +GAG+ +LGNI +G SRI A SVV++ P+ G+P++ VG CD
Sbjct: 12 DPVWDRITTEAQSAVDKEPLMGGLVHACILHHKSLDKALSYRIAAKLCSNEMSMMVLREIVDEGYADDPGLLEAARADLMAVYERDPACHRLLQPILYFKGYQAMQAYRVAHWLWKRGRHDLAYFFQMRCSEIFGIDIHPAARIGKGIMIDHAHSIVIGETAVVGDNVSMLHSVTLGGTGKEEEDRHPKIGNGVLIGAGAKVLGNIKVGNCSRIAAGSVVLQEVPPFKTVAGIPAKIVGEAGCD 255
BLAST of mRNA_C-linearis_contig10.621.1 vs. uniprot
Match: UPI00131D8062 (serine O-acetyltransferase n=1 Tax=Caulobacter sp. S45 TaxID=1641861 RepID=UPI00131D8062) HSP 1 Score: 202 bits (514), Expect = 3.410e-56 Identity = 113/242 (46.69%), Postives = 148/242 (61.16%), Query Frame = 3 Query: 621 PIWELVRFEGREA-SKQSHVSSMIHGSVLARTSLEDAVSCDVANKMATTFLSPTEVRCLLTDMYADEPFLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMHWLWRRDRQNLARYLQSICSEVCAADIHPAARIGKGILMASGCDIVIGETAVVGDGVCLLHGVTLGGTGNQTGDRHPKVGKGCHVGAGSSILGNIPLGEGSRIEAASVVVKPTKPYTINRGVPSQTVGWIVC 1343
P+W +R E A S + ++SM+H +L+ LE A+S +A K+ + +R + +A +P L V DL +D + L LF KGF AL TYR+ HWLW + R+ LA LQS SE+ DIHPAARIG I + G DIVIGETAVVGD V LLHGVTLGGTG Q GDRHPK+G+G VGAG+ ILGNI +G+ ++I + SVV+KP P+ GVP++ V C
Sbjct: 15 PVWAALRNEAAHAASTEPSLASMMHAVILSHDDLEHALSYQLARKLGDHEMRAMSMRETCEEAFASDPSLIATVHADLRVVFERDPACKGYLQPFLFFKGFQALQTYRVAHWLWNQGRETLAFQLQSRMSELFQLDIHPAARIGSAIFIDHGTDIVIGETAVVGDEVSLLHGVTLGGTGAQRGDRHPKLGRGVLVGAGAKILGNIQIGDYAKIASGSVVLKPVPPHCTAAGVPARLVNCPTC 256 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.621.1 >prot_C-linearis_contig10.621.1 ID=prot_C-linearis_contig10.621.1|Name=mRNA_C-linearis_contig10.621.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=458bp MHPPGRRRRWHSVAKVGLAASLVQSFAVPCLCGGNHGRVTSSRARAGFIAback to top mRNA from alignment at C-linearis_contig10:2944059..2948942- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.621.1 ID=mRNA_C-linearis_contig10.621.1|Name=mRNA_C-linearis_contig10.621.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4884bp|location=Sequence derived from alignment at C-linearis_contig10:2944059..2948942- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:2944059..2948942- >mRNA_C-linearis_contig10.621.1 ID=mRNA_C-linearis_contig10.621.1|Name=mRNA_C-linearis_contig10.621.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2748bp|location=Sequence derived from alignment at C-linearis_contig10:2944059..2948942- (Chordaria linearis ClinC8C monoicous)back to top |