mRNA_C-linearis_contig10.618.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig10.618.1
Unique NamemRNA_C-linearis_contig10.618.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig10.618.1 vs. uniprot
Match: D7G8R1_ECTSI (Macro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8R1_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 2.680e-103
Identity = 195/305 (63.93%), Postives = 218/305 (71.48%), Query Frame = 1 
Query:   16 ITATGGNRGKAAAGPPPRTLFKLHGSSVLSISAGDLTKWEGDAIVNAANEAMLGGGGVDGAIHRAAGRELLNACYAVRPVPHSRGIRCPTGEARITPGFRLNAKFVIHTVGPVYEDKEQAAPLLRNAIKNSLLLCKENGLKSVAFPALSCGVYGYPANEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYVPFFATASEKLEAVAEADGDASPKKLGAKPDSEAKEGKET---KGKDAQEPATKPSSL-VSETADATPALDGDEKPKASESVAPAEETPEAQEASAAEVEPMSQEESLGGLDGLVED 918
            + A G    +  +G P R LFKL  SSVL+IS GDLTKW+GDA+VNAANE MLGGGGVDGAIHRAAGR+LL ACY V P  +S  IRCPTGEARITPGFRL AKFVIHTVGPVYE+KE +APLLR+AIKNSLLLCKENG+KSVAFPA+SCGVYGYPA EAAEIAIDTMLEFSEGIDLIEFVLFGKDTY PF   ASEKL  V E  G       G+  DS A +   T   K  D   P T    + VS    A P L+  +KP+  E   P    P ++E   A VEPMSQEE+ G LDG VE+
Sbjct:   25 MNARGAGSSRRRSGLPTRRLFKLKDSSVLAISGGDLTKWKGDAVVNAANEWMLGGGGVDGAIHRAAGRDLLKACYDVEP--NSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYENKEVSAPLLRSAIKNSLLLCKENGVKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYNPFMKKASEKLAVVKEDSG-------GSPDDSNAPKASSTSEPKTVDEGAPNTASGEVSVSAGGAAAPTLEEKQKPEEPECAKPPA-GPTSEEGDGA-VEPMSQEETFGTLDGSVEE 318
[Close]
BLAST of mRNA_C-linearis_contig10.618.1 vs. uniprot
Match: UPI0005FB6297 (macro domain-containing protein VPA0103 isoform X1 n=2 Tax=Jatropha curcas TaxID=180498 RepID=UPI0005FB6297)

HSP 1 Score: 203 bits (517), Expect = 5.260e-59
Identity = 106/185 (57.30%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:   70 TLFKLHGSSVLSISAGDLTKW----EGDAIVNAANEAMLGGGGVDGAIHRAAGRELLNACYAVRPVPHSRGIRCPTGEARITPGFRLNAKFVIHTVGPVYEDKEQAAPLLRNAIKNSLLLCKENGLKSVAFPALSCGVYGYPANEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYVPFFATASEKL 612
            T+F L  SSVL I+ GD+TKW      DAIVN ANE MLGGGG DGAIHRAAG ELL+ACY V  V    GIRCPTGEARITPGF+L A  VI+TVGP+Y+     A  L+NA +NSL + K+N +K +AFPA+SCGVYGYP  EAA ++I T+ EF + +  + FVLF  D Y  +   A E L
Sbjct:   95 TVFPLSSSSVLKINKGDITKWFVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELLDACYKVPEVQP--GIRCPTGEARITPGFKLPASHVIYTVGPIYDTDSNPAASLKNAYRNSLTVAKDNNIKYIAFPAISCGVYGYPYEEAAAVSISTIKEFKDDLKEVHFVLFSDDIYNVWLKKAKELL 277
[Close]
BLAST of mRNA_C-linearis_contig10.618.1 vs. uniprot
Match: A0A7J0EAM2_9ERIC (Appr-1-p processing enzyme family protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0EAM2_9ERIC)

HSP 1 Score: 199 bits (507), Expect = 1.590e-58
Identity = 108/200 (54.00%), Postives = 134/200 (67.00%), Query Frame = 1 
Query:   28 GGNRGKAAAGPPPRTLFKLHGSSVLSISAGDLTKWE----GDAIVNAANEAMLGGGGVDGAIHRAAGRELLNACYAVRPVPHSRGIRCPTGEARITPGFRLNAKFVIHTVGPVYEDKEQAAPLLRNAIKNSLLLCKENGLKSVAFPALSCGVYGYPANEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYVPFFATASEKLE 615
            GG+RG A+ G      F+L  SS L I  GD+T+W      DAIVN ANE MLGGGG DGA+HR AG EL  ACY VR V    G+RCPTGEARITPGFRL A  VIHTVGP+Y+       LLR+A +NSL + KENG++ +AFPA+SCG++GYP +EAA +AI T+ EF+     + FVLF  D Y  +   A+E L+
Sbjct:    6 GGSRG-ASNGGEDSVNFRLSPSSDLRIQKGDITRWSVDGSSDAIVNPANERMLGGGGADGAVHRTAGPELRAACYNVREVRP--GVRCPTGEARITPGFRLPASHVIHTVGPIYDVANNPEALLRSAYRNSLRVAKENGIQYIAFPAISCGIFGYPFDEAATVAISTVREFANDFQEVHFVLFADDIYNVWLDKANELLQ 202
[Close]
BLAST of mRNA_C-linearis_contig10.618.1 vs. uniprot
Match: A0A1R3J5B3_9ROSI (Appr-1-p processing n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3J5B3_9ROSI)

HSP 1 Score: 199 bits (506), Expect = 1.630e-58
Identity = 106/185 (57.30%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:   76 FKLHGSSVLSISAGDLTKW----EGDAIVNAANEAMLGGGGVDGAIHRAAGRELLNACYAVRPVPHSRGIRCPTGEARITPGFRLNAKFVIHTVGPVYEDKEQAAPLLRNAIKNSLLLCKENGLKSVAFPALSCGVYGYPANEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYVPFFATASEKLEA 618
            FKL  +S+L I+ GD+TKW      DAIVN AN+ MLGGGG DGAIHRAAG EL +ACY V  V    GIRCPTGEARITPGF+L A  VIHTVGP+Y+  +     LRNA KNSL + KEN ++ +AFPA+SCGVYGYP  EAA +AI T+ EF+  I  + FVLF  + Y  +   A E L+A
Sbjct:   12 FKLSKTSLLKINKGDITKWFVDGSSDAIVNPANQKMLGGGGADGAIHRAAGPELRDACYEVPEVQP--GIRCPTGEARITPGFKLPASHVIHTVGPIYDYDKDPKASLRNAYKNSLTVAKENNIQYIAFPAISCGVYGYPFEEAATVAISTVKEFANDIKEVHFVLFEDEIYNIWLNKAKELLQA 194
[Close]
BLAST of mRNA_C-linearis_contig10.618.1 vs. uniprot
Match: A0A6N2AZA7_SOLCI (Macro domain-containing protein n=3 Tax=Solanoideae TaxID=424551 RepID=A0A6N2AZA7_SOLCI)

HSP 1 Score: 199 bits (505), Expect = 2.160e-58
Identity = 106/192 (55.21%), Postives = 129/192 (67.19%), Query Frame = 1 
Query:   49 AAGPPPRTLFKLHGSSVLSISAGDLTKWE----GDAIVNAANEAMLGGGGVDGAIHRAAGRELLNACYAVRPVPHSRGIRCPTGEARITPGFRLNAKFVIHTVGPVYEDKEQAAPLLRNAIKNSLLLCKENGLKSVAFPALSCGVYGYPANEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYVPFFATASEKL 612
            A+G      F+L  SS+L I  GD+T+W      DAIVN ANE MLGGGG DGAIHRAAG EL +ACY VR V    GIRCPTGEARITPGFRL A  VIHTVGPVY+        L NA +NSL + KEN ++ +AFPA+SCGV+GYP +EAA +AI T+ EF   +  + FVLF  + Y  +   A+E+L
Sbjct:    2 ASGGENSVTFQLTPSSLLKIQKGDITRWSIDGSSDAIVNPANERMLGGGGADGAIHRAAGPELRDACYKVREVQP--GIRCPTGEARITPGFRLPASHVIHTVGPVYDANPNPKASLTNAYRNSLRVAKENNIQYIAFPAISCGVFGYPYDEAATVAISTVKEFGSDLKEVHFVLFSDEIYDAWVTAANEQL 191
[Close]
BLAST of mRNA_C-linearis_contig10.618.1 vs. uniprot
Match: A0A2C9VLA2_MANES (Macro domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VLA2_MANES)

HSP 1 Score: 201 bits (512), Expect = 2.660e-58
Identity = 105/183 (57.38%), Postives = 127/183 (69.40%), Query Frame = 1 
Query:   76 FKLHGSSVLSISAGDLTKW----EGDAIVNAANEAMLGGGGVDGAIHRAAGRELLNACYAVRPVPHSRGIRCPTGEARITPGFRLNAKFVIHTVGPVYEDKEQAAPLLRNAIKNSLLLCKENGLKSVAFPALSCGVYGYPANEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYVPFFATASEKL 612
            F L  SSVL I+ GD+TKW      DAIVN ANE MLGGGG DGAIHRAAG EL +ACY V  V  +  IRCPTGEARITPGF+L A  VIHTVGP+Y+     A +L+NA +NSL + K+N +K +AFPA+SCGVYGYP  EAA +AI T+ EF++G+  + FVLF  D    +   A E L
Sbjct:   94 FPLSSSSVLKINKGDITKWFVDGSSDAIVNPANEKMLGGGGADGAIHRAAGPELRDACYKVPEVQPT--IRCPTGEARITPGFKLPASHVIHTVGPIYDPSRNCAAILKNAYRNSLTVAKDNNIKYIAFPAISCGVYGYPFEEAAAVAISTVKEFADGLKEVHFVLFSDDIDNVWLKKAKELL 274
[Close]
BLAST of mRNA_C-linearis_contig10.618.1 vs. uniprot
Match: M1AU85_SOLTU (Protein LRP16 n=4 Tax=Solanum TaxID=4107 RepID=M1AU85_SOLTU)

HSP 1 Score: 198 bits (503), Expect = 4.280e-58
Identity = 106/192 (55.21%), Postives = 130/192 (67.71%), Query Frame = 1 
Query:   49 AAGPPPRTLFKLHGSSVLSISAGDLTKWE----GDAIVNAANEAMLGGGGVDGAIHRAAGRELLNACYAVRPVPHSRGIRCPTGEARITPGFRLNAKFVIHTVGPVYEDKEQAAPLLRNAIKNSLLLCKENGLKSVAFPALSCGVYGYPANEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYVPFFATASEKL 612
            A+G      F+L  SS+L I  GD+T+W      DAIVN ANE MLGGGG DGAIHRAAG EL +ACY VR V H  G+RCPTGEARITPGFRL A  VIHTVGPVY+        L NA +NSL + KEN ++ +AFPA+SCGV+GYP +EAA +AI T+ EF   +  + FVLF  + Y  +   A+E+L
Sbjct:    2 ASGGENSVTFQLTPSSLLKIQKGDITRWSIDGSSDAIVNPANERMLGGGGADGAIHRAAGPELRDACYKVREV-HP-GVRCPTGEARITPGFRLPASHVIHTVGPVYDANPNPKASLTNAYRNSLRVAKENNIQYIAFPAISCGVFGYPYDEAATVAISTVKEFGSDLKEVHFVLFSDEIYDAWVTAANEQL 191
[Close]
BLAST of mRNA_C-linearis_contig10.618.1 vs. uniprot
Match: UPI000B790D55 (uncharacterized protein LOC110668061 isoform X1 n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B790D55)

HSP 1 Score: 200 bits (508), Expect = 9.260e-58
Identity = 106/185 (57.30%), Postives = 127/185 (68.65%), Query Frame = 1 
Query:   70 TLFKLHGSSVLSISAGDLTKW----EGDAIVNAANEAMLGGGGVDGAIHRAAGRELLNACYAVRPVPHSRGIRCPTGEARITPGFRLNAKFVIHTVGPVYEDKEQAAPLLRNAIKNSLLLCKENGLKSVAFPALSCGVYGYPANEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYVPFFATASEKL 612
            T+F L  SSVL I+ GD+TKW      DAIVN ANE MLGGGG DGAIHRAAG ELL+ACY V  V    G+RCPTGEARIT GF+L A  VIHTVGP+Y+     A  L+NA +NSL + K+N +K +AFPALSCGVYGYP  EAA +A  T+ EF++ +  I FVLF  D Y  +   A + L
Sbjct:   88 TVFPLSSSSVLKINKGDITKWFVDGSSDAIVNPANEKMLGGGGADGAIHRAAGPELLDACYRVPEVQP--GVRCPTGEARITLGFKLPASHVIHTVGPIYDTDRGPASSLKNAYRNSLTVAKDNNIKYIAFPALSCGVYGYPYEEAAAVATSTVKEFADDLKEIHFVLFSDDIYNIWLKKAKQLL 270
[Close]
BLAST of mRNA_C-linearis_contig10.618.1 vs. uniprot
Match: UPI0011D2ACB0 (uncharacterized protein LOC115663435 n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D2ACB0)

HSP 1 Score: 199 bits (507), Expect = 9.360e-58
Identity = 108/184 (58.70%), Postives = 125/184 (67.93%), Query Frame = 1 
Query:   76 FKLHGSSVLSISAGDLTKWE----GDAIVNAANEAMLGGGGVDGAIHRAAGRELLNACYAVRPVPHSRGIRCPTGEARITPGFRLNAKFVIHTVGPVYEDKEQAAPLLRNAIKNSLLLCKENGLKSVAFPALSCGVYGYPANEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYVPFFATASEKLE 615
            F L  +S L I  GD+TKW      DAIVN ANE MLGGGG DGAIHRAAG ELL ACY V  V    GIRCPTGEARIT GFRL A  VIHTVGP+Y+        LRNA +NSL++ KE  L+ VAFPA+SCGVYGYP +EAA IAI T+ E S+G+  + FVLF  D Y  + + A E L+
Sbjct:   79 FSLSPTSALVIQKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELLEACYKVPEVRP--GIRCPTGEARITAGFRLPASHVIHTVGPIYDADSNPQASLRNAYRNSLMVAKEKKLQHVAFPAISCGVYGYPYDEAATIAISTLKESSDGLKEVHFVLFSDDIYNAWLSKAKELLQ 260
[Close]
BLAST of mRNA_C-linearis_contig10.618.1 vs. uniprot
Match: W9S9J7_9ROSA (Macro domain-containing protein n=3 Tax=Morus notabilis TaxID=981085 RepID=W9S9J7_9ROSA)

HSP 1 Score: 197 bits (501), Expect = 9.980e-58
Identity = 103/185 (55.68%), Postives = 127/185 (68.65%), Query Frame = 1 
Query:   76 FKLHGSSVLSISAGDLTKW----EGDAIVNAANEAMLGGGGVDGAIHRAAGRELLNACYAVRPVPHSRGIRCPTGEARITPGFRLNAKFVIHTVGPVYEDKEQAAPLLRNAIKNSLLLCKENGLKSVAFPALSCGVYGYPANEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYVPFFATASEKLEA 618
            F L  +S L I  GD+TKW      DAI+N ANE MLGGGG DGAIHRAAG +LL ACY V  V  S G+RCPTGEARITPGFRL    V+ TVGP+Y  +  A   LRN  +NSL + KEN ++ +AFPA+SCGVYGYP +EA+ +AI T+ EF+ GI  + FVLF +D Y  +   A+E L+A
Sbjct:   15 FPLSSTSSLVIQRGDITKWFVDGSTDAIINPANERMLGGGGADGAIHRAAGPDLLQACYGVPEV--SPGVRCPTGEARITPGFRLPVAHVVFTVGPMYNGRSTAEAALRNTYRNSLKIAKENNIQYIAFPAISCGVYGYPYDEASTVAISTIKEFANGIKEVHFVLFQEDIYSVWLNKANELLKA 197
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8R1_ECTSI2.680e-10363.93Macro domain-containing protein n=2 Tax=Ectocarpus... [more]
UPI0005FB62975.260e-5957.30macro domain-containing protein VPA0103 isoform X1... [more]
A0A7J0EAM2_9ERIC1.590e-5854.00Appr-1-p processing enzyme family protein n=1 Tax=... [more]
A0A1R3J5B3_9ROSI1.630e-5857.30Appr-1-p processing n=1 Tax=Corchorus olitorius Ta... [more]
A0A6N2AZA7_SOLCI2.160e-5855.21Macro domain-containing protein n=3 Tax=Solanoidea... [more]
A0A2C9VLA2_MANES2.660e-5857.38Macro domain-containing protein n=1 Tax=Manihot es... [more]
M1AU85_SOLTU4.280e-5855.21Protein LRP16 n=4 Tax=Solanum TaxID=4107 RepID=M1A... [more]
UPI000B790D559.260e-5857.30uncharacterized protein LOC110668061 isoform X1 n=... [more]
UPI0011D2ACB09.360e-5858.70uncharacterized protein LOC115663435 n=1 Tax=Syzyg... [more]
W9S9J7_9ROSA9.980e-5855.68Macro domain-containing protein n=3 Tax=Morus nota... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2919421..2923117 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score328.6
Seed ortholog evalue4.5e-87
Seed eggNOG ortholog2880.D7G8R1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ADP-D-ribose binding
EggNOG OGsCOG2110@1,KOG2633@2759
Ec32 ortholog descriptionMacro domain
Ec32 orthologEc-22_002680.1
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size1305
Cds size1305
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927346.9459717-CDS-C-linearis_contig10:2919420..29195351622927346.9459717-CDS-C-linearis_contig10:2919420..2919535Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2919421..2919535 +
1690879642.3423817-CDS-C-linearis_contig10:2919420..29195351690879642.3423817-CDS-C-linearis_contig10:2919420..2919535Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2919421..2919535 +
1622927346.960278-CDS-C-linearis_contig10:2919945..29199981622927346.960278-CDS-C-linearis_contig10:2919945..2919998Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2919946..2919998 +
1690879642.3587399-CDS-C-linearis_contig10:2919945..29199981690879642.3587399-CDS-C-linearis_contig10:2919945..2919998Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2919946..2919998 +
1622927346.971763-CDS-C-linearis_contig10:2920284..29203381622927346.971763-CDS-C-linearis_contig10:2920284..2920338Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2920285..2920338 +
1690879642.3702457-CDS-C-linearis_contig10:2920284..29203381690879642.3702457-CDS-C-linearis_contig10:2920284..2920338Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2920285..2920338 +
1622927346.9873025-CDS-C-linearis_contig10:2920565..29206181622927346.9873025-CDS-C-linearis_contig10:2920565..2920618Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2920566..2920618 +
1690879642.379766-CDS-C-linearis_contig10:2920565..29206181690879642.379766-CDS-C-linearis_contig10:2920565..2920618Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2920566..2920618 +
1622927346.9978964-CDS-C-linearis_contig10:2920865..29209231622927346.9978964-CDS-C-linearis_contig10:2920865..2920923Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2920866..2920923 +
1690879642.3884215-CDS-C-linearis_contig10:2920865..29209231690879642.3884215-CDS-C-linearis_contig10:2920865..2920923Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2920866..2920923 +
1622927347.0115528-CDS-C-linearis_contig10:2921105..29211741622927347.0115528-CDS-C-linearis_contig10:2921105..2921174Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2921106..2921174 +
1690879642.396681-CDS-C-linearis_contig10:2921105..29211741690879642.396681-CDS-C-linearis_contig10:2921105..2921174Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2921106..2921174 +
1622927347.0248194-CDS-C-linearis_contig10:2921404..29215031622927347.0248194-CDS-C-linearis_contig10:2921404..2921503Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2921405..2921503 +
1690879642.4046314-CDS-C-linearis_contig10:2921404..29215031690879642.4046314-CDS-C-linearis_contig10:2921404..2921503Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2921405..2921503 +
1622927347.0369453-CDS-C-linearis_contig10:2922020..29220891622927347.0369453-CDS-C-linearis_contig10:2922020..2922089Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2922021..2922089 +
1690879642.4131374-CDS-C-linearis_contig10:2922020..29220891690879642.4131374-CDS-C-linearis_contig10:2922020..2922089Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2922021..2922089 +
1622927347.0464637-CDS-C-linearis_contig10:2922382..29231171622927347.0464637-CDS-C-linearis_contig10:2922382..2923117Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2922383..2923117 +
1690879642.421927-CDS-C-linearis_contig10:2922382..29231171690879642.421927-CDS-C-linearis_contig10:2922382..2923117Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2922383..2923117 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.618.1prot_C-linearis_contig10.618.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig10 2919421..2923117 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.618.1

>prot_C-linearis_contig10.618.1 ID=prot_C-linearis_contig10.618.1|Name=mRNA_C-linearis_contig10.618.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=435bp
MAHCYITATGGNRGKAAAGPPPRTLFKLHGSSVLSISAGDLTKWEGDAIV
NAANEAMLGGGGVDGAIHRAAGRELLNACYAVRPVPHSRGIRCPTGEARI
TPGFRLNAKFVIHTVGPVYEDKEQAAPLLRNAIKNSLLLCKENGLKSVAF
PALSCGVYGYPANEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYVPFFATA
SEKLEAVAEADGDASPKKLGAKPDSEAKEGKETKGKDAQEPATKPSSLVS
ETADATPALDGDEKPKASESVAPAEETPEAQEASAAEVEPMSQEESLGGL
DGLVEDRAKEPEPMSQEEAPGGFEAEPMSQSGPGHLEEADAVASAETTAN
VPAETTANVPAPAEDDVLGRKRSAEQTAAGDAPGDGDGHKGVGVAMETGE
KHEDGGQAAGEGPEGGEGAAMSSTCESSGPSVGR*
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mRNA from alignment at C-linearis_contig10:2919421..2923117+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.618.1 ID=mRNA_C-linearis_contig10.618.1|Name=mRNA_C-linearis_contig10.618.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3697bp|location=Sequence derived from alignment at C-linearis_contig10:2919421..2923117+ (Chordaria linearis ClinC8C monoicous)
ATGGCTCACTGCTACATAACCGCCACAGGGGGCAATCGAGGGAAAGCTGC
AGCTGGACCCCCTCCTCGAACGCTTTTCAAGCTTCACGGATCTAGTGTCT
TGTCGATTTCAGCAGGTACGTGAGACAAAGGGTGTGGGTACTTGGTTCTA
GTTGTGTTCACTACTCAGTGACAAGAAGTGTGCCGCGGAGTGTCCCAGCT
CCGAGACTCAAGGTGGTTAGTGGTAGCAAATTCGCCGCGAAGAAAACAAC
GGCGGGTGAGCGAGACGAGAGACGGCAGCCTATCCCCCGTCTCTCTGCTC
TCTATTCCTGCGTGGTTTGGGTTCTGTTGGGAGATCAAGTTCGGGTCCAG
GGGGGCAATGCGCTTATTTCCTGGACTTGACTGTGCCTACCGGCTGCGTG
CGATGGTTACGCCTCGAACAGACCCGGCGGTTTGGAGAACGTTCCACGAC
CCGCCCACGACTCCGCCCCTCTAGAATCCTACGAAATTCTGATTTGATGC
AGCGCCCCCCACGCATGTTGCACAGGTGATCTGACCAAATGGGAGGGTGA
TGCTATCGTCAATGCTGCCAACGAGGCGGTGAGTTGTGCCAAGCCAAGCC
AACTTCAGCGAATGCCGTGTACATACATTGACTTTGTTTCCGCACTACGA
TACACGCAGGAAATACGGCACAAGTCAGCCCGCTTTAACTAGTCAACTAC
AGCCAACCAAGCCAACTCACAAGTTATCCTACGTTCTTATGAAAGTTTCC
CACGGCCTTTGTATGAAATGCTGCGCGAAACAGCAGTATCGACACCGACG
CTCTTACTGCTGTCGAGGGAAAACACATGCTCACTCTCCGCCCTCCGCGT
GTGCATGCCTACAGATGTTGGGAGGTGGAGGAGTAGATGGGGCCATTCAT
CGAGCAGCAGGACGAGAGGTACGGCTATCGAGCAGTTGCAACTTTCGCAA
GAACGCTTCGGGTTTGACGGCAATGCTTCTTCTCCCTGCAAAGTGACCTT
TTACATTGTCCGGGAAATGTCACCGCTGCAAAGGCCTCCTCGGCGTATTC
AAAGTGTTGGTGTTTCACCAAGACGCACCATGAACGGCCAGCCGCAGTGA
CCGCCTCTCCCCTGCCTGTCCTGTCTTGTCTTGTTGCCGTGGCAGCTCTT
GAACGCATGCTATGCAGTTCGGCCGGTCCCCCACTCGCGCGGAATCAGGT
GAGGCAGACAGAACCTTGTCCTGTCAATTTTCCTCTTGGTACTGAGTTGT
CAAGAAGAGAGCCGATAGGTGTACTGTAGTGTTGACCCAAAGTTGTGGGT
TTTGCGGCCCGAACCTTATAACAAGGTAGTCGGTTTTGCCTCCGCACGTT
CCTCACATGCGCGCGAAATGCGTCCAAATGTTGTCGCAAATGTGGTCCTC
CTATTTAGTTGCTTTATTCTGCCGATAATCCTGTACGTATCGAAGGTGTC
CGACTGGGGAAGCTCGCATCACCCCTGGGTTCCGCCTCAACGCCAAGTTT
GTGGTGAGATACTATGTTCTTGGCTTTGTCCCAAAGGTTGAATTGGAGCC
GTCACCTTTGAAATCTTCAGCGCGTTCAGTCTCATTGTTGTTAGCGCAGA
AATATGTATGTTGCGCACAGGTGCTTCGGTCATCGCGGTTTCGCCCCTCG
CGTGTCGTGTGTTTCCCCTCCGCTCTTGAGGGCAGATCCATACGGTTGGT
CCTGTCTACGAAGACAAAGAACAGGCAGCACCGCTCTTGCGAAACGCCAT
CAAGGTAAGACCGACGGCGAAAAACACGTCGCACCGCCGCCCATGCGGCG
TGAATATCACTTCGATGACGTAGAGGGCAGCCAGCAGAGTACTACGCTCA
ACCCTGAAGTAGCCATGAAAGAAGCTCACGAGATAGCTGTCTTCTCTCTC
CAAGCGTCTCGCCGGAAGAGATGATACGATACGCTGTTGCTCGCGTGTAA
TGTTCGCCTACTCCGGCTCGTGCCTCGTGAACAGAATTCCCTGCTGCTCT
GCAAGGAGAACGGGCTGAAAAGTGTTGCTTTCCCCGCTTTATCCTGCGGC
GTCTACGGATACCCCGCGAACGAGGCTGCCGAGGTAGGCCGGCCGACTGA
TGCACGTTTGTCGCCGGTGATGAACAGAACAAGCCGAGCTGCCGTGCTGC
TTACGCGCAGCCGCGGTTCTGAGAGAAACTTGACACGCGTACACTTGTAT
GCGCACGAATAGCTTGCATTTCGCTGTTTGTGTGCCGTCTGCGGATTTGG
TTTTCAAGCACAAATACCGTTGCTATGTATGATGTTCTTTTGCCCTCGGA
CGAACCTACGACACTCAAAGAGGACCTCCCTTCTGTGTGTCTAGCAGAAG
GTTTCGAAGTACGTAGGTTATGGCGGCTCCCTTTGGGTTTACTTCGGGTT
TTCTATGGCATGACTCGAGCATGCACTGCTGTGCTTTTATCTCTCCTTTT
CGATGACGCATACGGTTGCTTTTCACTCTCCTACGAACGAAGTAATGTAC
CGAAACACCTCTGCATGTGCACAAACCTTTTCTTGGACGTTCGGCGACGA
CGCTCACGTGTGCATGCCTTTGTGATGCCAACGATTGCTCGCATGGACAG
ATCGCGATCGACACGATGCTGGAATTCAGCGAAGGTATCGATCTCATCGA
GTTTGTGCTCTTCGGAAAGGTGAGAGGAGCGTCGGTCGATACCGGTACGT
CGCTGCAGATATTCATCGATCAAAGACGCGAATGGTACTGCTGTTCCAAC
CGCTGCACAACGCTTCTGCCAGCGGCCTGCTTACGCTTGAGCGCGTCAAT
CCAAACAACGGATTTCGCGACTTGTCTCTGAAATGGCGGGCGTCGCCTGA
GCCCTCAACCTTGTGATTTTTTCTGTGCTCGACGGACACCATGAGAATGC
TGAAACTGTTCCACAAAAACATGGCGGATGCTTGTTCTTGGCACACTCCC
CGTGATTGGCAGGACACATATGTCCCTTTCTTCGCGACAGCTTCTGAGAA
GCTTGAGGCCGTAGCGGAGGCCGACGGCGACGCGTCACCAAAAAAACTCG
GCGCAAAGCCAGATTCCGAGGCGAAAGAGGGCAAGGAGACGAAAGGTAAA
GATGCGCAAGAGCCCGCTACCAAACCGTCCTCGCTTGTAAGCGAAACCGC
CGACGCAACTCCAGCGCTTGATGGGGACGAGAAACCCAAGGCGTCCGAAT
CCGTCGCACCCGCGGAGGAAACTCCGGAAGCACAAGAGGCTTCTGCGGCA
GAGGTAGAGCCCATGTCACAAGAGGAGAGTCTGGGCGGGCTCGACGGGCT
TGTCGAAGACCGCGCCAAGGAACCCGAACCCATGTCGCAAGAGGAGGCTC
CGGGCGGGTTCGAAGCCGAACCGATGTCGCAATCAGGCCCTGGGCACCTC
GAAGAGGCCGACGCAGTCGCATCCGCGGAGACGACGGCAAACGTGCCTGC
GGAGACGACGGCAAACGTGCCTGCGCCTGCCGAGGATGACGTGCTAGGCC
GGAAGCGGTCGGCGGAACAAACCGCAGCAGGTGACGCGCCAGGCGATGGC
GATGGCCACAAGGGTGTTGGCGTTGCGATGGAGACGGGCGAAAAACACGA
AGACGGAGGGCAGGCAGCAGGAGAAGGGCCAGAAGGGGGAGAGGGAGCTG
CCATGTCCAGCACGTGCGAGTCGTCTGGCCCAAGCGTGGGGCGATGA
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Coding sequence (CDS) from alignment at C-linearis_contig10:2919421..2923117+

>mRNA_C-linearis_contig10.618.1 ID=mRNA_C-linearis_contig10.618.1|Name=mRNA_C-linearis_contig10.618.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2610bp|location=Sequence derived from alignment at C-linearis_contig10:2919421..2923117+ (Chordaria linearis ClinC8C monoicous)
ATGGCTCACTGCTACATAACCGCCACAGGGGGCAATCGAGGGAAAGCTGC
AGCTGGACCCCCTCCTCGAACGCTTTTCAAGCTTCACGGATCTAGTGTCT
TGTCGATTTCAGCAGATGGCTCACTGCTACATAACCGCCACAGGGGGCAA
TCGAGGGAAAGCTGCAGCTGGACCCCCTCCTCGAACGCTTTTCAAGCTTC
ACGGATCTAGTGTCTTGTCGATTTCAGCAGGTGATCTGACCAAATGGGAG
GGTGATGCTATCGTCAATGCTGCCAACGAGGCGGTGATCTGACCAAATGG
GAGGGTGATGCTATCGTCAATGCTGCCAACGAGGCGATGTTGGGAGGTGG
AGGAGTAGATGGGGCCATTCATCGAGCAGCAGGACGAGAGATGTTGGGAG
GTGGAGGAGTAGATGGGGCCATTCATCGAGCAGCAGGACGAGAGCTCTTG
AACGCATGCTATGCAGTTCGGCCGGTCCCCCACTCGCGCGGAATCAGCTC
TTGAACGCATGCTATGCAGTTCGGCCGGTCCCCCACTCGCGCGGAATCAG
GTGTCCGACTGGGGAAGCTCGCATCACCCCTGGGTTCCGCCTCAACGCCA
AGTTTGTGGTGTCCGACTGGGGAAGCTCGCATCACCCCTGGGTTCCGCCT
CAACGCCAAGTTTGTGATCCATACGGTTGGTCCTGTCTACGAAGACAAAG
AACAGGCAGCACCGCTCTTGCGAAACGCCATCAAGATCCATACGGTTGGT
CCTGTCTACGAAGACAAAGAACAGGCAGCACCGCTCTTGCGAAACGCCAT
CAAGAATTCCCTGCTGCTCTGCAAGGAGAACGGGCTGAAAAGTGTTGCTT
TCCCCGCTTTATCCTGCGGCGTCTACGGATACCCCGCGAACGAGGCTGCC
GAGAATTCCCTGCTGCTCTGCAAGGAGAACGGGCTGAAAAGTGTTGCTTT
CCCCGCTTTATCCTGCGGCGTCTACGGATACCCCGCGAACGAGGCTGCCG
AGATCGCGATCGACACGATGCTGGAATTCAGCGAAGGTATCGATCTCATC
GAGTTTGTGCTCTTCGGAAAGATCGCGATCGACACGATGCTGGAATTCAG
CGAAGGTATCGATCTCATCGAGTTTGTGCTCTTCGGAAAGGACACATATG
TCCCTTTCTTCGCGACAGCTTCTGAGAAGCTTGAGGCCGTAGCGGAGGCC
GACGGCGACGCGTCACCAAAAAAACTCGGCGCAAAGCCAGATTCCGAGGC
GAAAGAGGGCAAGGAGACGAAAGGTAAAGATGCGCAAGAGCCCGCTACCA
AACCGTCCTCGCTTGTAAGCGAAACCGCCGACGCAACTCCAGCGCTTGAT
GGGGACGAGAAACCCAAGGCGTCCGAATCCGTCGCACCCGCGGAGGAAAC
TCCGGAAGCACAAGAGGCTTCTGCGGCAGAGGTAGAGCCCATGTCACAAG
AGGAGAGTCTGGGCGGGCTCGACGGGCTTGTCGAAGACCGCGCCAAGGAA
CCCGAACCCATGTCGCAAGAGGAGGCTCCGGGCGGGTTCGAAGCCGAACC
GATGTCGCAATCAGGCCCTGGGCACCTCGAAGAGGCCGACGCAGTCGCAT
CCGCGGAGACGACGGCAAACGTGCCTGCGGAGACGACGGCAAACGTGCCT
GCGCCTGCCGAGGATGACGTGCTAGGCCGGAAGCGGTCGGCGGAACAAAC
CGCAGCAGGTGACGCGCCAGGCGATGGCGATGGCCACAAGGGTGTTGGCG
TTGCGATGGAGACGGGCGAAAAACACGAAGACGGAGGGCAGGCAGCAGGA
GAAGGGCCAGAAGGGGGAGAGGGAGCTGCCATGTCCAGCACGTGCGAGTC
GTCTGGCCCAAGCGTGGGGCGATGAGACACATATGTCCCTTTCTTCGCGA
CAGCTTCTGAGAAGCTTGAGGCCGTAGCGGAGGCCGACGGCGACGCGTCA
CCAAAAAAACTCGGCGCAAAGCCAGATTCCGAGGCGAAAGAGGGCAAGGA
GACGAAAGGTAAAGATGCGCAAGAGCCCGCTACCAAACCGTCCTCGCTTG
TAAGCGAAACCGCCGACGCAACTCCAGCGCTTGATGGGGACGAGAAACCC
AAGGCGTCCGAATCCGTCGCACCCGCGGAGGAAACTCCGGAAGCACAAGA
GGCTTCTGCGGCAGAGGTAGAGCCCATGTCACAAGAGGAGAGTCTGGGCG
GGCTCGACGGGCTTGTCGAAGACCGCGCCAAGGAACCCGAACCCATGTCG
CAAGAGGAGGCTCCGGGCGGGTTCGAAGCCGAACCGATGTCGCAATCAGG
CCCTGGGCACCTCGAAGAGGCCGACGCAGTCGCATCCGCGGAGACGACGG
CAAACGTGCCTGCGGAGACGACGGCAAACGTGCCTGCGCCTGCCGAGGAT
GACGTGCTAGGCCGGAAGCGGTCGGCGGAACAAACCGCAGCAGGTGACGC
GCCAGGCGATGGCGATGGCCACAAGGGTGTTGGCGTTGCGATGGAGACGG
GCGAAAAACACGAAGACGGAGGGCAGGCAGCAGGAGAAGGGCCAGAAGGG
GGAGAGGGAGCTGCCATGTCCAGCACGTGCGAGTCGTCTGGCCCAAGCGT
GGGGCGATGA
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