Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 424 |
| Cds size | 240 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927324.3093836-UTR-C-linearis_contig10:2822691..2822737 | 1622927324.3093836-UTR-C-linearis_contig10:2822691..2822737 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 2822692..2822737 - |
| 1690879626.7380602-UTR-C-linearis_contig10:2822691..2822737 | 1690879626.7380602-UTR-C-linearis_contig10:2822691..2822737 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 2822692..2822737 - |
| 1622927324.3426943-UTR-C-linearis_contig10:2822994..2823132 | 1622927324.3426943-UTR-C-linearis_contig10:2822994..2823132 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 2822995..2823132 - |
| 1690879626.7797992-UTR-C-linearis_contig10:2822994..2823132 | 1690879626.7797992-UTR-C-linearis_contig10:2822994..2823132 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 2822995..2823132 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927324.3203647-CDS-C-linearis_contig10:2822737..2822904 | 1622927324.3203647-CDS-C-linearis_contig10:2822737..2822904 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 2822738..2822904 - |
| 1690879626.7589831-CDS-C-linearis_contig10:2822737..2822904 | 1690879626.7589831-CDS-C-linearis_contig10:2822737..2822904 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 2822738..2822904 - |
| 1622927324.3315165-CDS-C-linearis_contig10:2822921..2822994 | 1622927324.3315165-CDS-C-linearis_contig10:2822921..2822994 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 2822922..2822994 - |
| 1690879626.7689564-CDS-C-linearis_contig10:2822921..2822994 | 1690879626.7689564-CDS-C-linearis_contig10:2822921..2822994 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 2822922..2822994 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.603.1 >prot_C-linearis_contig10.603.1 ID=prot_C-linearis_contig10.603.1|Name=mRNA_C-linearis_contig10.603.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=80bp
MISNVAIGMWFVWTRLQAPSYRHQERERERERERENALCSTLTAVNTYGG
WLLSSERRKFGRLVYILCTTTRAVLTSPP* back to topmRNA from alignment at C-linearis_contig10:2822692..2823132- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.603.1 ID=mRNA_C-linearis_contig10.603.1|Name=mRNA_C-linearis_contig10.603.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=441bp|location=Sequence derived from alignment at C-linearis_contig10:2822692..2823132- (Chordaria linearis ClinC8C monoicous)
TGCGGCACTTCTGTACATCTTGTCCATGTCAATACCTTGCACGGTTGGTG
TGAATGCGGGGTGCATCCCAAACACCGTGCGGGAGATTACAAGACTTTCG
CCTTGCTGTTAGGGCATGCATGGTGTTTGTGTATCGGCATGATCAGCAAC
GTGGCGATCGGAATGTGGTTTGTTTGGACCAGGCTACAAGCACCTAGCTA
CCGGCACCAGGGTGAACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAATGCACTATGTTCGACACTGACTGCTGTAAACACGTACG
GCGGCTGGCTACTTTCTAGTGAAAGAAGGAAATTTGGTCGATTGGTGTAC
ATATTATGTACAACAACCAGAGCCGTGCTCACCTCCCCCCCGTGAACCGC
AACGTAGGACAGGAGGATACCCCCTGACAGAATTATTCGAT back to topCoding sequence (CDS) from alignment at C-linearis_contig10:2822692..2823132- >mRNA_C-linearis_contig10.603.1 ID=mRNA_C-linearis_contig10.603.1|Name=mRNA_C-linearis_contig10.603.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=480bp|location=Sequence derived from alignment at C-linearis_contig10:2822692..2823132- (Chordaria linearis ClinC8C monoicous)
ATGATCAGCAACGTGGCGATCGGAATGTGGTTTGTTTGGACCAGGCTACA
AGCACCTAGCTACCGGCACCAGGATGATCAGCAACGTGGCGATCGGAATG
TGGTTTGTTTGGACCAGGCTACAAGCACCTAGCTACCGGCACCAGGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGCACTATGTTCGACACTGA
CTGCTGTAAACACGTACGGCGGCTGGCTACTTTCTAGTGAAAGAAGGAAA
TTTGGTCGATTGGTGTACATATTATGTACAACAACCAGAGCCGTGCTCAC
CTCCCCCCCGTGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGC
ACTATGTTCGACACTGACTGCTGTAAACACGTACGGCGGCTGGCTACTTT
CTAGTGAAAGAAGGAAATTTGGTCGATTGGTGTACATATTATGTACAACA
ACCAGAGCCGTGCTCACCTCCCCCCCGTGA back to top
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