mRNA_C-linearis_contig10.595.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig10.595.1
Unique NamemRNA_C-linearis_contig10.595.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig10.595.1 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE)

HSP 1 Score: 468 bits (1205), Expect = 6.320e-159
Identity = 236/335 (70.45%), Postives = 270/335 (80.60%), Query Frame = 1
Query:  313 AVNAKLADFGAALTGALITNNTLELANGTFFLGDPSLGSSLFMRPCYKELSALILGGASSDTFRNFVVTGTPGIGKSVFGFYLLYLLRCEGKNVVFERKGKWYRLSHAGVVQASLEAFNQHGYMDDPNSWYLSDPKDRPEEYFQGTTVVLVSPRTSRVNEFMKQADSCMFFMPVWSLDELFKCQRAVFPHVLETDVRERFGKVGGVARAVFDVEKLERVCRKMQTAASNMDLSLLQQILSRRRGDADQISTDRSGDALVHLLPIPETGFKDFSVDFASEYAHNLTVGELPKKEFVPLASFVRAAFANDELGTKVVAERAAGFETIAHKTIGGAGE 1317
            AV   LADFGA LT A++ +NTLELA+GTFFLG+P L S LF+RPCYK+LS LIL G +  T    VVTGTPGIGKS FGFYL+YLLR +G  VV ERK  W+R S  GV      +F + GY+   ++WYLSDP+DRP+E     TVVL+SPR SRVNEFMKQ  S  F+MP W LDELF+C++AVFPHV ETDVRERF KVGGVARAVFD EKL++VC KMQ AASNMDL+LLQQILSR R D DQ+STDRSGDAL+HLLPIPETGF++FSVDFASE+AH +T+GELPKKEF PLASFV AAFA+DELG KV AERAAGFETIAHKTIGGA E
Sbjct:   35 AVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKDSWFRFSDEGVTVGYFYSFRRAGYLYGNSTWYLSDPEDRPKELLGLPTVVLLSPRKSRVNEFMKQPGSRRFYMPPWCLDELFRCRQAVFPHVPETDVRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEFSVDFASEFAHIVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAERAAGFETIAHKTIGGASE 369          
BLAST of mRNA_C-linearis_contig10.595.1 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 1.270e-75
Identity = 146/202 (72.28%), Postives = 160/202 (79.21%), Query Frame = 1
Query:    1 REAADGSPAADEIRAVQDEXXXXERKIEDAEEETAQVVKKIDGIEAAIAGGSRYLGMNDPEALLKQLGRKEEQXXXXXXXXX------------ELLLKKEDRLSRIEQLRANDAPAVNAKLADFGAALTGALITNNTLELANGTFFLGDPSLGSSLFMRPCYKELSALILGGASSDTFRNFVVTGTPGIGKSVFGFYLLYL 570
            REAAD  PAADEIRAVQD+    ERK EDAE+ETA+VVKKID IEAAIAGGSRYLGM DPEALLKQLGRKEEQXXXXXXXXX            ELLLKKEDR SRIEQLRAN+APA N  ++DF AALTGA++T +TLELANGTFFLG+  LGS LF+R CYKE++ LIL G   D     VVTGTPGIGKS FG+YLLYL
Sbjct:   22 REAADRIPAADEIRAVQDDIRGVERKXEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQXXXXXXXXXXXXXXXRELLLNELLLKKEDRFSRIEQLRANNAPAANKNVSDFAAALTGAVVTEDTLELANGTFFLGNSDLGSKLFIRHCYKEMADLILSGKVQDV----VVTGTPGIGKSTFGYYLLYL 219          
BLAST of mRNA_C-linearis_contig10.595.1 vs. uniprot
Match: A0A6H5KCR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR9_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 8.940e-40
Identity = 72/111 (64.86%), Postives = 83/111 (74.77%), Query Frame = 1
Query:  313 AVNAKLADFGAALTGALITNNTLELANGTFFLGDPSLGSSLFMRPCYKELSALILGGASSDTFRNFVVTGTPGIGKSVFGFYLLYLLRCEGKNVVFERKGKWYRLSHAGVV 645
            AV   LADFGA LT A++ +NTLELA+GTFFLG+P L S LF+RPCYK+LS LIL G +  T    VVTGTPGIGKS FGFYL+YLLR +G  VV ERKG W+R S  GV 
Sbjct:   16 AVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKGCWFRFSDGGVT 126          
BLAST of mRNA_C-linearis_contig10.595.1 vs. uniprot
Match: A0A397UD55_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UD55_9GLOM)

HSP 1 Score: 143 bits (361), Expect = 3.030e-34
Identity = 98/335 (29.25%), Postives = 163/335 (48.66%), Query Frame = 1
Query:  328 LADFGAALTGALITNNTLELANGTFFLGDPSLGSSLFMRPCYKELSALILGGASSDTFRNFVVTGTPGIGKSVFGFYLLYLLRCEGKNVVFERKGKWYRLSHAGVVQASLEAFNQHGYMDDPNSWYLSDPKDRPEEYFQGTTVVLVSPRTSRVNEFMKQADSCMFFMPVWSLDELFKCQRAVFPHVLETDVRERFGKVGGVARAVFDVEKLERVCRKMQTAASNMDLSLLQQILSRRRGDADQISTDRSGDALVHL---LP-------IPETGFKDFSVDFASEYAHNLTVGELPKKEFVPLASFVRAAFANDELGTKVVAERAAGFETIAHKTI 1302
            L  F   L  A I NN L+L +GT+FLGD   G+ L++R CY  L+ +I     ++      +TG PGIGK+ FG+YLLYLL+ + K +V+ +  ++  L +      S   F+ + Y+D+ + WY+ D   +P       T++  SP+     EF K   + + FMP WS +E+ +C+  +F H+    V + + + GG+ R VF+          ++ A +  +  LL  +     G+ D    D     +VH+   LP         ET + +  + FASE+     + +  K     L +FV A+ +++E  T     R   FE IAH+ +
Sbjct:   36 LGKFWCFLENAKIDNNFLQLPDGTYFLGDKKQGTILYIRKCYLHLADIIF----NEKINRCRITGNPGIGKTFFGYYLLYLLQKQNKTIVYHKARQYPILFNKQYTFRSDNIFDFNEYLDNTDVWYIVD--GQPPLEVHAKTILFCSPQKQHYKEFDKMIGTSIRFMPAWSWNEINECRIGIFNHLEIAKVEDLYSRWGGIPRFVFEKALDSSQQNHLEEAINKCNTRLLDFV-----GEIDH--ADDISHRIVHIHTNLPGEEEEKEDEETHYVNKFILFASEWVAEKVIDKFEKSYNQQLKNFVTASSSDNEYSTL----RGVIFEQIAHRIL 353          
BLAST of mRNA_C-linearis_contig10.595.1 vs. uniprot
Match: A0A397UC44_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UC44_9GLOM)

HSP 1 Score: 132 bits (331), Expect = 5.630e-30
Identity = 97/335 (28.96%), Postives = 161/335 (48.06%), Query Frame = 1
Query:  328 LADFGAALTGALITNNTLELANGTFFLGDPSLGSSLFMRPCYKELSALILGGASSDTFRNFVVTGTPGIGKSVFGFYLLYLLRCEGKNVVFERKGKWYRLSHAGVVQASLEAFNQHGYMDDPNSWYLSDPKDRPEEYFQGTTVVLVSPRTSRVNEFMKQADSCMFFMPVWSLDELFKCQRAVFPHVLETDVRERFGKVGGVARAVFDVEKLERVCRKMQTAASNMDLSLLQQILSRRRGDADQISTDRSGDALVHL---LPIPETGFKDFSVD-------FASEYAHNLTVGELPKKEFVPLASFVRAAFANDELGTKVVAERAAGFETIAHKTI 1302
            L  F + L  A I NN L+L +GT+FLGD   GS L++R CY  L+ +I      +  R   +TG PGIGK+ FG+YLLY L  + K +V+ +  ++  L +     +S + F+ + Y+++ + WY+ D   +P    +  T++  SP+     EF K   + + FMP+WS +E+ +C+  +F H+    V + +   GG+ R V +         +++ A S  +  LL  +       AD IS       +VH+   LP  E   +D           FASE+     + +  +     L +FV A+   +E  T     +   FE IAH+ +
Sbjct:   78 LGKFWSFLKNAKIDNNFLQLPDGTYFLGDKKQGSILYIRKCYLHLADIIF----KEKMRRCRITGNPGIGKTFFGYYLLYFLSKQNKTIVYHKACQFPILFNKQNTFSSDKIFDFYEYLNNRDVWYIVD--GQPPLEVRAKTILFCSPQKQHYKEFDKMVGTEIRFMPIWSWNEINECRIGMFNHLEIAKVEDLYSCWGGIPRFVLENALYSSQQNQLEEAISKCNNRLLDFV--GEINHADDISH-----RIVHIHTNLPGEEEENEDEETHYIKKFLLFASEWVAEKVMDKFERNYNQLLRNFVTASLFENEYNTL----QGVIFERIAHRIL 395          
BLAST of mRNA_C-linearis_contig10.595.1 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 8.260e-29
Identity = 86/125 (68.80%), Postives = 90/125 (72.00%), Query Frame = 1
Query:    1 REAADGSPAADEIRAVQDEXXXXERKIEDAEEETAQVVKKIDGIEAAIAGGSRYLGMNDPEALLKQLGRKEEQXXXXXXXXX-----------------ELLLKKEDRLSRIEQLRANDAPAVNA 324
            REAAD  PAADEIRAVQDE    ERKIEDAEEETA+VVKKID IEAAIAGG+RYLGM DPEALLKQL +    XXXXXXXXX                 ELLLK EDRLSR EQ RAN+APA  A
Sbjct:   29 REAADRLPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGARYLGMTDPEALLKQLEQLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXELLLKTEDRLSRSEQFRANNAPADQA 153          
BLAST of mRNA_C-linearis_contig10.595.1 vs. uniprot
Match: A0A8H3WYS8_GIGMA (Putative crinkler family protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H3WYS8_GIGMA)

HSP 1 Score: 128 bits (321), Expect = 1.840e-28
Identity = 94/345 (27.25%), Postives = 166/345 (48.12%), Query Frame = 1
Query:  325 KLADFGAALTGALITNNTLELANGTFFLGDPSLGSSLFMRPCYKELSALILGGASSDTFRNFVVTGTPGIGKSVFGFYLLYLLRCEGKNVVFERKGKWYRL--SHAGVVQASLEAFNQHGYMDDPNSWYLSD---PKDRPEEYFQGTTVVLVSPRTSRVNEFMKQADSCMFFMPVWSLDELFKCQRAVFPHVLETDVRERFGKVGGVARAVFDVEKLERVCRKMQTAASNMDLSLLQQILSRRRGDADQISTDRSGDALVHL---LPIPETG-------FKDFSVDFASEYAHNLTVGELPKKEFVPLASFVRAAFANDELGTKVVAERAAGFETIAHKTIGGAG 1314
            KL+ F   L    I+   L L++   F G  S  S +F+R CY +L  ++         R   +TG PGIGK+ FG+Y+LY L  + K V++ +      +  +   + + +L +FNQ  Y+++P +WY+ D   PK+      +  T+++ SP+     EF K   S + +MPVW+ +E+ +C+  +F H+    ++  + + GG+ R V +    +     +Q A   +D ++L  +     G+ +    D     LVH+   LP+ E         + +  + FASEY  N  V +L       L +F+ A+ + +E G+     R   FE +AH+ + G G
Sbjct:  118 KLSKFWKVLKNVKISGKFLRLSDNNHFFGKQSQPSVVFIRDCYIDLEGIVF----DKKIRRLRITGNPGIGKTFFGYYILYKLASKCKTVIYHKVNNDPIIFSNEGSISKENLFSFNQ--YLNEPETWYIVDGHVPKE-----CEAKTILVCSPKKGNYREFDKYIGSTIRYMPVWTFNEIEECRSNIFNHLGIDKIKNLYMRWGGIPRFVLENAHDKAQQNLLQHAIDTVDETILNYV-----GETN--CPDDVSHKLVHIRTNLPVDEETDVEKVLPYTETYIYFASEYVANEVVVKLKINYKEKLKNFIMASSSINEYGSL----RGNIFERVAHQILQGGG 440          
BLAST of mRNA_C-linearis_contig10.595.1 vs. uniprot
Match: D7G515_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 4.620e-28
Identity = 82/122 (67.21%), Postives = 86/122 (70.49%), Query Frame = 1
Query:    1 REAADGSPAADEIRAVQDEXXXXERKIED-------AEEETAQVVKKIDGIEAAIAGGSRYLGMNDPEALLKQLGRKEEQXXXXXXXXXE----------LLLKKEDRLSRIEQLRANDAPA 315
            REAADGSPAADEIRAVQ  XXXX             AEEETA+VVKKID IEAAIAGGS+YLGM DPEALLKQLGRKEEQ        X           +LLKKEDRLSRIEQLRAN+APA
Sbjct:   22 REAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXAEEETAEVVKKIDYIEAAIAGGSKYLGMTDPEALLKQLGRKEEQLRRKEGKEXXXXXXXXXXXXILLKKEDRLSRIEQLRANNAPA 143          
BLAST of mRNA_C-linearis_contig10.595.1 vs. uniprot
Match: A0A7S0WLH6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WLH6_9CHLO)

HSP 1 Score: 125 bits (314), Expect = 1.260e-27
Identity = 99/332 (29.82%), Postives = 159/332 (47.89%), Query Frame = 1
Query:  313 AVNAKLADFGAALTGALITNNTLELANGTFFLGDPSLGSSLFMRPCYKELSALILGGASSDTFRNFVVTGTPGIGKSVFGFYLL-YLLRCEGKNVVFERKGKWYRLSHAGVVQASLEAFNQHGYMDDPNSWYLSDPKDRPEEYFQGTTVVLVSPRTSRVNEFMKQADSCMFFMPVWSLDELFKCQRAVFPHVLETDVRERFGKVGGVARAVFD-VEKLERVCRKMQTAASNMDLSLLQQILSRRRGDADQISTDRSGDALVHLLPIPETGFKDFSVDFASEYAHNLTVGELPKKEFVPLASFVRAAFANDELGTKVVAERAAGFETIAHKTI 1302
            A N  +A F A L  A + ++ LEL    FFLGD  +G++L +R  YK+L  ++L        +   +TG+PGIGKS F F+L+ +L   +   VV   +G    L   G        ++ H Y+ DPN+WYL D  +   E+ Q  TV++ SP  S  + F+KQ  +   FMPVW+ DE+  C+  +   + +  V   F K GG  R V +  E        M   A+  DL++L + L ++    ++ ++DR     VH        +   S+ FAS+Y  ++   +L +     +  ++RA      LG      R   FE +AH+ +
Sbjct:   51 AANNPMAQFWAGLAEAEVKDSFLELPKDCFFLGDKMMGNTLLIRDAYKDLLQIVLDRIKQGITK-VAITGSPGIGKSYFLFFLMRHLALTKQPVVVVHIRGMQKVLCFTGCNVLRSTLYDFHHYLQDPNTWYLVDGIE--PEFCQAKTVLVSSPNRSIYHTFLKQRGATQRFMPVWTKDEIDVCRARMHDGLTQELVDGLFMKWGGRPRYVLEKAEDPSAQALLMDAIATCPDLTMLMKSLGQQ--GREEKASDRLLTIDVH------EDYATTSMAFASDYIAHVVSAKLLEHTEHEVRIWLRATEGESILGPL----RGVLFERLAHRVL 367          
BLAST of mRNA_C-linearis_contig10.595.1 vs. uniprot
Match: D0NWG9_PHYIT (Crinkler (CRN) family protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NWG9_PHYIT)

HSP 1 Score: 124 bits (310), Expect = 2.420e-27
Identity = 97/309 (31.39%), Postives = 150/309 (48.54%), Query Frame = 1
Query:  379 LELANGTFFLGDPSLGSSLFMRPCYKELSALILGGASSDTFR--NFVVTGTPGIGKSVFGFYLLYLLRCEGKNVVFERKG--KWYRLSHAGVVQASLEAFNQHGYMDDPNSWYLSDPKDRPEEYFQGTTVVLVSPRTSRVNEFMK-QADSCMFFMPVWSLDELFKCQRAVFPHVLETDVRERFGKVGGVARAVFDVEKLERVCRKMQTAASNMDLSLLQQILSRRRGDADQISTDRSGDALVHLLPIPETGFKDFSVDFASEYAHNLTVGELPKKEFVPLASFVRAAFANDELGTKVVAERAAGFETIA 1290
            +EL   T+ LGD +LGS +++R CY  L  L L     +     + V+ GTPGIGK+ FGF ++ +L   G  VV+E  G  K +  +H  V Q S E F +   +D P ++Y+ D   +P  Y+   T++L SPR S   EF K    SC  +MPVWSL E+ +C++ ++       V++ F + GG+AR V    ++      ++ A   +DL  L +  S+   +  Q+S       L+H         + F+  FAS+Y        L KK+   L  F+ A+     L   +V  RA  F   A
Sbjct:  168 VELPRDTYLLGDSTLGSRIYIRHCYPALWELCLERIRDEKTNTPHLVILGTPGIGKTFFGFVIVLILARAGATVVYESGGLKKRFLFAHNVVAQGSQEDFVR--ILDQPTTYYIVDAV-KPA-YYPAKTILLTSPRRSIWYEFNKTNCQSC--YMPVWSLKEILQCRKLMYSDTPMAVVQDCFRRWGGIARYVLRFSQVGDQQVLLEKATDTVDLDWLVKACSQLDANDAQVSH-----RLLHYRVSKAFDSEYFA--FASQYVQQAVYNRLYKKDKRKLLEFIAASDGVGALSWPLV-RRACAFSAAA 462          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFB9_9PHAE6.320e-15970.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8Q1_ECTSI1.270e-7572.28Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5KCR9_9PHAE8.940e-4064.86Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A397UD55_9GLOM3.030e-3429.25Uncharacterized protein n=1 Tax=Gigaspora rosea Ta... [more]
A0A397UC44_9GLOM5.630e-3028.96Uncharacterized protein n=1 Tax=Gigaspora rosea Ta... [more]
D8LPP1_ECTSI8.260e-2968.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8H3WYS8_GIGMA1.840e-2827.25Putative crinkler family protein n=1 Tax=Gigaspora... [more]
D7G515_ECTSI4.620e-2867.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0WLH6_9CHLO1.260e-2729.82Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
D0NWG9_PHYIT2.420e-2731.39Crinkler (CRN) family protein, putative n=1 Tax=Ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2753550..2757648 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score125.6
Seed ortholog evalue5.9e-26
Seed eggNOG ortholog4787.PITG_17517T0
Hectar predicted targeting categoryother localisation
EggNOG OGs2CQRH@1,2R5I5@2759,3QINW@4776
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1320
Cds size1317
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927344.4243186-CDS-C-linearis_contig10:2753549..27538651622927344.4243186-CDS-C-linearis_contig10:2753549..2753865Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2753550..2753865 +
1690879640.6403754-CDS-C-linearis_contig10:2753549..27538651690879640.6403754-CDS-C-linearis_contig10:2753549..2753865Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2753550..2753865 +
1622927344.4335387-CDS-C-linearis_contig10:2756645..27576461622927344.4335387-CDS-C-linearis_contig10:2756645..2757646Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2756646..2757646 +
1690879640.6531296-CDS-C-linearis_contig10:2756645..27576461690879640.6531296-CDS-C-linearis_contig10:2756645..2757646Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2756646..2757646 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.595.1prot_C-linearis_contig10.595.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig10 2753550..2757646 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.595.1

>prot_C-linearis_contig10.595.1 ID=prot_C-linearis_contig10.595.1|Name=mRNA_C-linearis_contig10.595.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=439bp
REAADGSPAADEIRAVQDEIRGVERKIEDAEEETAQVVKKIDGIEAAIAG
GSRYLGMNDPEALLKQLGRKEEQLRRKEEQLRELLLKKEDRLSRIEQLRA
NDAPAVNAKLADFGAALTGALITNNTLELANGTFFLGDPSLGSSLFMRPC
YKELSALILGGASSDTFRNFVVTGTPGIGKSVFGFYLLYLLRCEGKNVVF
ERKGKWYRLSHAGVVQASLEAFNQHGYMDDPNSWYLSDPKDRPEEYFQGT
TVVLVSPRTSRVNEFMKQADSCMFFMPVWSLDELFKCQRAVFPHVLETDV
RERFGKVGGVARAVFDVEKLERVCRKMQTAASNMDLSLLQQILSRRRGDA
DQISTDRSGDALVHLLPIPETGFKDFSVDFASEYAHNLTVGELPKKEFVP
LASFVRAAFANDELGTKVVAERAAGFETIAHKTIGGAGE
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mRNA from alignment at C-linearis_contig10:2753550..2757648+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.595.1 ID=mRNA_C-linearis_contig10.595.1|Name=mRNA_C-linearis_contig10.595.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4099bp|location=Sequence derived from alignment at C-linearis_contig10:2753550..2757648+ (Chordaria linearis ClinC8C monoicous)
CGAGAAGCTGCCGATGGCAGTCCGGCGGCGGACGAGATCCGTGCGGTCCA GGATGAGATCCGTGGTGTAGAGCGCAAGATCGAGGATGCAGAGGAGGAGA CGGCACAGGTCGTCAAGAAGATTGATGGTATTGAGGCTGCTATCGCTGGG GGCTCCAGGTACCTCGGAATGAACGACCCCGAAGCCCTCTTGAAGCAACT AGGCAGGAAGGAGGAGCAGCTACGCAGGAAGGAGGAGCAATTACGCGAGC TCCTTTTGAAGAAGGAGGACCGGCTCTCCAGGATTGAGCAGCTCCGTGCC AACGACGCCCCGGCAGGTATAGAAGCGTCCCACTATGTGTGAAGATCCAC AGCAGTGTACAGAATAGGAAAATCATGCAAGTCGCCCGCGACAAAAGCAG GCCATTTGAAACATTTTAGGAGTTCCTTGTGGCCGGTACATTTGTAGTGT TGTCGTTTTGCACGGGCAATTCGCCTCCTGTTCAAAGCAATCTGCGGACG TATGGTAGATCCACGCTCTTCAGCAACTATGGCAGAATGTGCGACCTTTT CCTGTTCCACCTGGCTGCAGAACGCTGTGACAGGTCCTCCTCTCCTCATA TATAAGATATAAGTATACTCCTATAGTACATACTTCTATACTTCGTATGT ATTTTTCCCCCCATTACTGTATTGGATTTTTGTCGTCTGCCCCACTGGCC CCCATCCTCCACTACGACTAGCTAGACGACCCAACCGGGGTCGCACAGGA GGGGGGGGGGGTGGACCCCCTCCTGCGGTGCCTGCCTGTCATGTTTTTAT CGCAAGCAGGGTTTAGCACTCCCCACCCTCGTCAACAATGAAGTCGAGGT ATTTACTACGTTACGAAATCGCTTTCAATTTCCAGAAACGAATGTGAGAA AAAACTCGCTTCGCTGGGACTCGAACCCATGACCTGGTTCTAGAACGTTG CGTGGGTACCAACAAGCTTATACTCGATTTTTGTTTTCTTCCCTCCCATT ATTGGATATTTGTCTGTAACCTCGTGCTTTTTTTTGTGGGGGGAAGGAAA ATTAACAGCATACCGCAAAAGAATCGAAGCACTGTCTTGGTGAACGCCTG CGGTCTATGAGCCACCGCATGCTTAGTTCCACACTGGTTGTGTACCCCGA GCAAGTTTTCGGGTGATCGTGCTTTCTTCACACACAATTTATGAGCTGCT CAAGAATTTTGAGCACATGCACCCGCAGCCTCCCCCACGCCCTCCCCTCG GAGAGCACTTGCTCGTGTCTCTTATGTAGCTGTCTTCGTGCCAGTGCTTT TTCGCATGTTTTTTGTGACGACATGCCATAGCATGAATGGGGCTGCAGGA GGAAGGGGCGCTCGTGGCCCGTGATTTGATAACAATCTTTGTGTGTATGT AGTCTTTCAGCAGATCCTCGCGAACGGACGCATTGTGGGGATGCGGTGAA ATTTTGGTACGTTTGAGGAGAATGCCAACTTTGTGAGACCCGACTCCGGG GATGTCTGCTGGTTCCGGTACAGATATGGATCGCATGATTGCAAGGTATT GCAAGGTATTTCAAGGGAGCAGGTGCTTCGGTAAGAGTAGTGCAGCGACA ACGGCTGCGTGTCCAACCCTGTGCTGGGCTCTTCCGTGGCCCCCTTGCGA TTCCACGAGGACGGGTTGGCGATATTCGCTCGTGTCTCTAGCCGTAAACT CAATGTCGGGTGTCTCGTGCTCTGCGCTACAACAGCGGTGTCCTTATCTT TTTTAATGCACAGACATTCTATCCGTGTGTGTTTGTTGTGCTTTCAACGT CACCGAACTTGCTCGAAAGTGGGTTTGATCTGTAACCATGGCATGCATTC GGACCTTGGACACACATCCAAACCACCGTTGCTTTGAACGTGAACCTATC GCTCGCAGTTTGCCCTTTGAGAGGTACCAAACAATCCGTTGTAGTTGCAA CAGCCCACAGGTTGCGTGCGGTTCGACCATGAGGAACGAACTACGGGCGA CCTAGAAAGACTCGAGCGTAGGAAAGTTGTCGATATGTAGGCGCCGAAGT AGCTGCGTGTAAGGGGAGCACCAGCGATACGATGTTGACTGCTCGAACTG CAATACTAACAGAGGCCAGCAAGTTAGATGGACCTTTTGTGGGGGGTCGA CCAGGGTACTCCTTGATCAGTAGCTATCTTGGTTGGAGGTAGACATTTTG TCGTGCCAAATTTTGTGAGGGCTACTTTGCTTGACTCTGGCGCTTAGTAA GTCGATTTTTATCGATTTGAGGCGACCTTTGCAGGCCCATGACGAGCGGT GTGATGACGATCCAAAATGAAAACTCTAGCCAACGGGATGTAGTAGTGTG TCTTTCTCTTTTCCATGTGGCGAAGTTTTTGATGGTGCACTCACTCCCTA CGAAGCCATCGTAGAGCAGACTGTCTCGAGATCAAGAGTACGCAAGGAAT GTGTTTTGGAGACGAGAGTTTGTTATTTCTGCATAAATAGCGCCACACTG TGATACCTGTAGAATGTGCGGGGACAAAGACCGATAGCTTTTCGCTGTGC AGTAGCACCGTGATTCCACCTCCGACGCGCACTTATACTCTGGAGGTGCA TCATGTGTGCTGTCATGATATTCTTCCGTGCACTCCTGGTTCTACTGAAG TGGGCTACAATAGCAGGGTCCTCGCTCTACTTTCTTTACGCACGCGTCAC CTGTATTGCTTCCGTTGAAAAGGTCATGTGGTTTCAAGATTGCCGAACTC GCGTGATGGCGATTTCGGTCTAACACCGTGTCCTGGATTTGACCGAGGGT ATCTGTTGCGTTTTTTGTCGCCCAACATGAGCTTGCTTATGATGCGCCTC TTTCGTATTTCGACGAAATATCTCGCTTCTTCTCCTGTTGTCGTTCTTGT TGGAAGCGAGTATTTTTTTGGCCGTCCTAGCATCTCTCGTGCCCGTCACG TATCTTTTTGGATGCAAACCCCCATGCAGGCCCCCGTCTGTGACGTTGTC CCTAGCGCCGATTTTTATGCTTCTTCGGCTGAACAAAATATAACACATGT TTCTCCCGTCATGGACGGACCTATCTTTTTCCTCTGCCCGTTGCAGTCAA TGCGAAACTCGCAGATTTTGGGGCCGCTCTCACCGGAGCCCTGATCACAA ACAACACCCTGGAACTAGCAAACGGCACCTTCTTCCTCGGCGACCCTTCG TTGGGATCCAGCTTATTCATGCGTCCTTGTTACAAGGAGTTGTCAGCGCT GATCTTGGGTGGAGCTAGCAGCGACACTTTTCGCAATTTTGTTGTCACAG GTACTCCCGGAATCGGCAAGTCAGTGTTTGGTTTCTATCTGCTGTACCTG CTTCGCTGCGAAGGAAAAAATGTTGTGTTCGAGCGAAAGGGCAAATGGTA TCGGCTCAGTCATGCTGGGGTGGTTCAAGCAAGTTTGGAAGCTTTTAATC AACATGGTTACATGGATGACCCAAACAGTTGGTATTTGAGTGACCCGAAG GACCGGCCTGAGGAATATTTTCAGGGTACAACGGTTGTGTTGGTGTCGCC CAGGACGAGCAGGGTTAACGAGTTCATGAAACAAGCCGATTCCTGTATGT TTTTTATGCCGGTGTGGAGCCTGGATGAACTGTTCAAATGTCAACGAGCT GTTTTCCCTCATGTGCTAGAAACCGACGTGCGGGAACGCTTTGGTAAGGT TGGAGGTGTGGCTCGAGCAGTCTTCGATGTGGAAAAGCTCGAGCGAGTTT GCCGCAAAATGCAGACAGCGGCTTCAAACATGGATTTAAGTCTGCTGCAA CAGATTCTGTCGCGTAGGCGTGGTGACGCTGATCAGATTTCGACCGATAG GAGTGGTGACGCACTTGTGCACTTGTTGCCTATACCTGAAACAGGTTTCA AGGATTTCAGTGTCGATTTTGCGAGTGAGTACGCCCATAATTTGACTGTA GGAGAGCTTCCCAAAAAGGAATTTGTTCCACTTGCAAGCTTTGTCCGGGC TGCTTTCGCGAACGACGAATTGGGCACCAAGGTTGTGGCTGAGCGCGCGG CCGGGTTTGAAACTATTGCACACAAAACAATCGGGGGCGCTGGCGAGCA
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Coding sequence (CDS) from alignment at C-linearis_contig10:2753550..2757648+

>mRNA_C-linearis_contig10.595.1 ID=mRNA_C-linearis_contig10.595.1|Name=mRNA_C-linearis_contig10.595.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2634bp|location=Sequence derived from alignment at C-linearis_contig10:2753550..2757648+ (Chordaria linearis ClinC8C monoicous)
CGAGAAGCTGCCGATGGCAGTCCGGCGGCGGACGAGATCCGTGCGGTCCA
GGATGAGATCCGTGGTGTAGAGCGCAAGATCGAGGATGCAGAGGAGGAGA
CGGCACAGGTCGTCAAGAAGATTGATGGTATTGAGGCTGCTATCGCTGGG
GGCTCCAGGTACCTCGGAATGAACGACCCCGAAGCCCTCTTGAAGCAACT
AGGCAGGAAGGAGGAGCAGCTACGCAGGAAGGAGGAGCAATTACGCGAGC
TCCTTTTGAAGAAGGAGGACCGGCTCTCCAGGATTGAGCAGCTCCGTGCC
AACGACGCCCCGGCAGCGAGAAGCTGCCGATGGCAGTCCGGCGGCGGACG
AGATCCGTGCGGTCCAGGATGAGATCCGTGGTGTAGAGCGCAAGATCGAG
GATGCAGAGGAGGAGACGGCACAGGTCGTCAAGAAGATTGATGGTATTGA
GGCTGCTATCGCTGGGGGCTCCAGGTACCTCGGAATGAACGACCCCGAAG
CCCTCTTGAAGCAACTAGGCAGGAAGGAGGAGCAGCTACGCAGGAAGGAG
GAGCAATTACGCGAGCTCCTTTTGAAGAAGGAGGACCGGCTCTCCAGGAT
TGAGCAGCTCCGTGCCAACGACGCCCCGGCAGTCAATGCGAAACTCGCAG
ATTTTGGGGCCGCTCTCACCGGAGCCCTGATCACAAACAACACCCTGGAA
CTAGCAAACGGCACCTTCTTCCTCGGCGACCCTTCGTTGGGATCCAGCTT
ATTCATGCGTCCTTGTTACAAGGAGTTGTCAGCGCTGATCTTGGGTGGAG
CTAGCAGCGACACTTTTCGCAATTTTGTTGTCACAGGTACTCCCGGAATC
GGCAAGTCAGTGTTTGGTTTCTATCTGCTGTACCTGCTTCGCTGCGAAGG
AAAAAATGTTGTGTTCGAGCGAAAGGGCAAATGGTATCGGCTCAGTCATG
CTGGGGTGGTTCAAGCAAGTTTGGAAGCTTTTAATCAACATGGTTACATG
GATGACCCAAACAGTTGGTATTTGAGTGACCCGAAGGACCGGCCTGAGGA
ATATTTTCAGGGTACAACGGTTGTGTTGGTGTCGCCCAGGACGAGCAGGG
TTAACGAGTTCATGAAACAAGCCGATTCCTGTATGTTTTTTATGCCGGTG
TGGAGCCTGGATGAACTGTTCAAATGTCAACGAGCTGTTTTCCCTCATGT
GCTAGAAACCGACGTGCGGGAACGCTTTGGTAAGGTTGGAGGTGTGGCTC
GAGCAGTCTTCGATGTGGAAAAGCTCGAGCGAGTTTGCCGCAAAATGCAG
ACAGCGGCTTCAAACATGGATTTAAGTCTGCTGCAACAGATTCTGTCGCG
TAGGCGTGGTGACGCTGATCAGATTTCGACCGATAGGAGTGGTGACGCAC
TTGTGCACTTGTTGCCTATACCTGAAACAGGTTTCAAGGATTTCAGTGTC
GATTTTGCGAGTGAGTACGCCCATAATTTGACTGTAGGAGAGCTTCCCAA
AAAGGAATTTGTTCCACTTGCAAGCTTTGTCCGGGCTGCTTTCGCGAACG
ACGAATTGGGCACCAAGGTTGTGGCTGAGCGCGCGGCCGGGTTTGAAACT
ATTGCACACAAAACAATCGGGGGCGCTGGCGAGTCAATGCGAAACTCGCA
GATTTTGGGGCCGCTCTCACCGGAGCCCTGATCACAAACAACACCCTGGA
ACTAGCAAACGGCACCTTCTTCCTCGGCGACCCTTCGTTGGGATCCAGCT
TATTCATGCGTCCTTGTTACAAGGAGTTGTCAGCGCTGATCTTGGGTGGA
GCTAGCAGCGACACTTTTCGCAATTTTGTTGTCACAGGTACTCCCGGAAT
CGGCAAGTCAGTGTTTGGTTTCTATCTGCTGTACCTGCTTCGCTGCGAAG
GAAAAAATGTTGTGTTCGAGCGAAAGGGCAAATGGTATCGGCTCAGTCAT
GCTGGGGTGGTTCAAGCAAGTTTGGAAGCTTTTAATCAACATGGTTACAT
GGATGACCCAAACAGTTGGTATTTGAGTGACCCGAAGGACCGGCCTGAGG
AATATTTTCAGGGTACAACGGTTGTGTTGGTGTCGCCCAGGACGAGCAGG
GTTAACGAGTTCATGAAACAAGCCGATTCCTGTATGTTTTTTATGCCGGT
GTGGAGCCTGGATGAACTGTTCAAATGTCAACGAGCTGTTTTCCCTCATG
TGCTAGAAACCGACGTGCGGGAACGCTTTGGTAAGGTTGGAGGTGTGGCT
CGAGCAGTCTTCGATGTGGAAAAGCTCGAGCGAGTTTGCCGCAAAATGCA
GACAGCGGCTTCAAACATGGATTTAAGTCTGCTGCAACAGATTCTGTCGC
GTAGGCGTGGTGACGCTGATCAGATTTCGACCGATAGGAGTGGTGACGCA
CTTGTGCACTTGTTGCCTATACCTGAAACAGGTTTCAAGGATTTCAGTGT
CGATTTTGCGAGTGAGTACGCCCATAATTTGACTGTAGGAGAGCTTCCCA
AAAAGGAATTTGTTCCACTTGCAAGCTTTGTCCGGGCTGCTTTCGCGAAC
GACGAATTGGGCACCAAGGTTGTGGCTGAGCGCGCGGCCGGGTTTGAAAC
TATTGCACACAAAACAATCGGGGGCGCTGGCGAG
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