mRNA_C-linearis_contig10.579.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.579.1 vs. uniprot
Match: D7G8N1_ECTSI (Eukaryotic translation initiation factor 3 subunit E n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8N1_ECTSI) HSP 1 Score: 902 bits (2331), Expect = 0.000e+0 Identity = 445/485 (91.75%), Postives = 466/485 (96.08%), Query Frame = 2
Query: 209 MSEAVPAAPAATTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKNLNNTDEDPPDMVERRAEVFARMSALKEEAGVLTEIFADKIAVEEASMTQMDHSNFTPQQLSVEKVMKEQNFTWKGIKAELELEDSALESYYANAKFQSDCGDYVTAAFALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMDIEAAEKWIVDLIRGSKLDAKIDSRDNSVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLATDTANGVTPDPANYTGRGGGDWG 1663
MSEAV A PA+ TTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLD TNMSDYAMEIYK+LN+TDEDPPDMVERRAEVFARMS LK+EAG+LTE+FADK VEEA++TQ+D ++FT QQLSVEK++KEQNFTWKGIK EL LEDSALESYYANAKFQSDCGDYV AA ALKSYCDITQTPGVPGSGPNGM ALWGRLACEILVANWDGALTLLRELK CIEFTNAPPL+QLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTA+ILTKAGAGGGKYVMRDLMRVLE EKHAYTDPVTEFLEGLQVSFDFDGAQ RL ECERVLLSDFFLCNC +EFMEAARHFIFETYCRIHHKIDIGMLA+KMGM++EAAEKWIVDLIRGSKLDAKIDSRDN+VIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLATDTANGVTPDPANY+GRGGGDWG
Sbjct: 1 MSEAVEAVPASRTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDGTNMSDYAMEIYKSLNSTDEDPPDMVERRAEVFARMSTLKDEAGILTEVFADKAVVEEAAVTQVDPASFTQQQLSVEKLIKEQNFTWKGIKGELGLEDSALESYYANAKFQSDCGDYVAAAAALKSYCDITQTPGVPGSGPNGMSALWGRLACEILVANWDGALTLLRELKSCIEFTNAPPLQQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAIILTKAGAGGGKYVMRDLMRVLEHEKHAYTDPVTEFLEGLQVSFDFDGAQARLVECERVLLSDFFLCNCADEFMEAARHFIFETYCRIHHKIDIGMLADKMGMEMEAAEKWIVDLIRGSKLDAKIDSRDNNVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLATDTANGVTPDPANYSGRGGGDWG 485
BLAST of mRNA_C-linearis_contig10.579.1 vs. uniprot
Match: A0A836CBR3_9STRA (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBR3_9STRA) HSP 1 Score: 528 bits (1359), Expect = 2.490e-180 Identity = 283/483 (58.59%), Postives = 343/483 (71.01%), Query Frame = 2
Query: 218 AVPAAPAATTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKNLNNTDEDPPDMVERRAEVFARMSALKEEAGVLTEIFADKIAVEEASMTQMDHSNFTPQQLSVEKVMKEQNFTWKGIKAELELEDSALESYYANAKFQSDCGDYVTAAFALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGK----YVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMDIEAAEKWIVDLIRGSKLDAKIDSRDNSVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLATDTANGVTPDPANYTGRGGG 1654
A A +T + +DLTRTIS+YLDLH+MFPLLDFVEM+N+Y + V+QARLDLL+ TNM DYAME+Y+NL+N P +MV RR +VFAR+ LKE A L I D +AV ++ EQ F W G+++E L DS L+SY AKF DCGDY A ALK + + + G GS G ALWGRLACEIL N +GAL L+R++K IE+ +EQLQQRSWLLHWSLFVFFNHANGRDEL+ LFFEE F+QAIQTNCPWLLRYLVTAV+LT++ MRDL+RVLEQE+ +Y+DP+T+FLE L V+FDFDGA R ECE+VL DFFLC+ +EFMEAAR F FETYCRIH KID+ +LA KM MD +AAEKWI DLIR S+LDAKIDSRDNSV+MG +FPSVYQQ++ KT DL++RSY L+N LKQ A D ANG+T DP NY + GG
Sbjct: 6 AASAGGDGSTGADHDLTRTISEYLDLHLMFPLLDFVEMNNMYDSAGVSQARLDLLEPTNMVDYAMEVYQNLHNGAAAPKEMVVRRDKVFARLEELKEAASRLIAIVEDPVAVG--------------------RLENEQRFDWNGLQSEFGLPDSMLQSYADLAKFNYDCGDYKGAGAALKVF--LALSGGAAGS-QRGPSALWGRLACEILSNNSEGALALIRDVKAMIEYRGGSAIEQLQQRSWLLHWSLFVFFNHANGRDELIALFFEEKFLQAIQTNCPWLLRYLVTAVVLTRSTGSTSSNKQAQTMRDLIRVLEQEQGSYSDPITQFLESLYVNFDFDGALLRRRECEQVLRRDFFLCSVCDEFMEAARLFTFETYCRIHRKIDVALLAAKMDMDADAAEKWIADLIRTSQLDAKIDSRDNSVVMGASFPSVYQQVIEKTDDLSLRSYVLINNLKQYAQDHANGLTDDP-NYGQQRGG 464
BLAST of mRNA_C-linearis_contig10.579.1 vs. uniprot
Match: A0A7S2SQG8_9STRA (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQG8_9STRA) HSP 1 Score: 402 bits (1032), Expect = 1.360e-131 Identity = 221/463 (47.73%), Postives = 303/463 (65.44%), Query Frame = 2
Query: 209 MSEAVPAAPAATTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNI--YPADQVAQARLDLLDATNMSDYAMEIYKNLN-NTDEDPPDMVERRAEVFARMSALKEEAGVLTEIFADKIAVEEASMTQMDHSNFTPQQLSVEKVMKEQNFTWKGIKAELELEDSALESYYANAKFQSDCGDYVTAAFALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMDIEAAEKWIVDLIRGSKLDAKIDSRDNSVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQ 1588
M+ PA+ A++ ++YDLT IS+YLDLH+MFPLL+FVE + Y + +ARL L TNM DYA+EI+ +LN EDP DMV +R EV+ ++ +K E L+ F + M + ++ + Q+ + + I+ + ++ + +E+YY KFQ +CG Y A L + I + S G ALWG+ A IL WD AL ++ LK I+ P QLQQR+WLLHWSLFVFFNH GRD ++ F + ++QAIQ N PWLLRYL +AVI+ + G ++ L+RV+EQE+H+Y+DP+T+FLE L+V FDF+GAQ +L EC VLL D+FLCNCT+EF+++AR FIFETYCRIH KIDI MLAEK+ M+ E AE+WIV+LIRG++LDAKIDS+DN VIMG +FPSVYQQI+ KTKDLTVRS+ L +++
Sbjct: 1 MATPKPASEPASS-ARYDLTPVISEYLDLHLMFPLLEFVESNEHLNYDKSDIQRARLAYLKPTNMVDYAIEIFHDLNPEVKEDPADMVRQRDEVYEKLGRIKTEHTKLSTFFQE--------MREGKYAGGFGEG---------QSLSLRWIQENIGVDQAGVENYYRYGKFQYECGLYEDACTVLSDFLSIDEYKIT--SSDLGFAALWGKFAALILQKQWDAALAEMQTLKKAIDERTTPDKLQLQQRTWLLHWSLFVFFNHHQGRDLIIEAFLSDRYLQAIQINAPWLLRYLTSAVIINQRRRGE----LKALVRVIEQEQHSYSDPITKFLECLRVDFDFEGAQQKLVECTNVLLGDYFLCNCTDEFVQSARLFIFETYCRIHRKIDISMLAEKLVMEPEDAEQWIVNLIRGAQLDAKIDSKDNCVIMGSSFPSVYQQIVDKTKDLTVRSFQLATNVER 439
BLAST of mRNA_C-linearis_contig10.579.1 vs. uniprot
Match: A0A7S2GAP6_9STRA (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GAP6_9STRA) HSP 1 Score: 395 bits (1016), Expect = 1.110e-128 Identity = 228/498 (45.78%), Postives = 309/498 (62.05%), Query Frame = 2
Query: 203 GEMSEAVP--AAPAATTTS--QYDLTRTISKYLDLHMMFPLLDFVEMSNI--YPADQVAQARLDLLDATNMSDYAME------IYKNLNNTDEDPP-----------DMVERRAEVFARMSALKEEAGVLTEIFADKIAVEEASMTQMDHSNFTPQQLSVEKVMKEQNFTWKGIKAELELEDSALESYYANAKFQSDCGDYVTAAFALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMDIEAAEKWIVDLIRGSKLDAKIDSRDNSVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLATDTANGVTPDP 1627
G+M++A P ++P A ++DLT TIS YLDLH++FPLLDFVE + Y + +ARL LL TNM+DY +E ++N + +E+ P ++ + V+A ++ L++ L + F DK AV + + + + LSV+K AL++YY AKFQ DCG+Y A L Y + +T + G A WG+ A IL+ NWD AL + LK IE N E+LQQR+WLLHWSLF+FFNH G+D L+ FF E ++QAIQTN PWLLRYL TAVI+ + +++L++V++QE++ Y DP+T+FLE L V FDF+GAQ +L EC+ VL SD+FLCNC + FME AR FIFETYCRIHHKIDIGMLA+K+ M E AE+WIVDLIRG+ LDAKIDS++N VIMG FPSVYQQ++ KTKDLT+RSY L +++ + DT TP+P
Sbjct: 13 GKMAQAAPEVSSPEAKDEGLGRFDLTPTISAYLDLHLLFPLLDFVENNEQLKYDGADITRARLALLKPTNMADYTIEQAVRVWCFENGADPNENDPSIKLLPADEQTELQSQMDTVYANIAELEKNNKKLYDFFQDKDAVRSLVESGQLNLEYLEKNLSVDK--------------------EALDAYYHYAKFQYDCGNYSCAYEKLSDYLSVAETK----TTELGYNAQWGKFAAAILMTNWDQALIEMNILKKAIEERNVSDKEKLQQRTWLLHWSLFLFFNHPKGKDMLIDTFFSERYLQAIQTNTPWLLRYLTTAVIINNRR----RNELKNLLQVIQQEQYTYNDPITKFLECLYVHFDFEGAQQKLHECKLVLQSDYFLCNCADVFMENARLFIFETYCRIHHKIDIGMLAQKLAMGPEEAERWIVDLIRGAYLDAKIDSKENYVIMGSNFPSVYQQVIDKTKDLTIRSYQLAENIER-SMDTP---TPEP 478
BLAST of mRNA_C-linearis_contig10.579.1 vs. uniprot
Match: A0A5J4XZT5_9CHLO (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XZT5_9CHLO) HSP 1 Score: 380 bits (975), Expect = 2.120e-123 Identity = 204/443 (46.05%), Postives = 293/443 (66.14%), Query Frame = 2
Query: 251 SQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKNLNNTDEDPPDMVERRAEVFARMSALKEEAGVLTEIFADKIAVEEASMTQMDHSNFTPQQLSVEKVMKEQNFTWKGIKAELELEDSALESYYANAKFQSDCGDYVTAAFALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMDIEAAEKWIVDLIRGSKLDAKIDSRDNSVIMGGTFPSVYQQIMGKTKDLTVRSYTLVN 1576
+++DLT ++K +D H++FPLL+++ +YP DQ+ Q +LDLL+ TNM DYAMEI+ LNN D P ++ ERR EV + L+ +A + + +D+ V+ QL EK QN W ++ E + +++ Y AKFQ DCG+Y AA L Y ++ + + ALWG+LA EIL+ +WD A+ L +LK I+ N AP L QLQQR+WL+HWSLFVFFNH NGR+ ++ LFF+E F+ AIQTN L+RYL A ++ K + VM+DLMR++EQE + +DPVT+FL+ L ++DFDGAQ +L+ECE+V+ +D+FL +C EEF+E AR FIFETYCRIH+ I++ MLA K+GMD ++AEKWIV+LIR ++L+AKIDS+ +V+M TFPS +QI K KDL++R++ L N
Sbjct: 2 AEHDLTAKLAKSMDRHLVFPLLEWLSAKELYPEDQIQQGKLDLLNKTNMLDYAMEIFTQLNNRDP-PQELKERRTEVVQNLRKLQAQADSIVQFLSDESLVK---------------QLKQEKA---QNLPW--LQREHNIGSEQIDALYQYAKFQFDCGNYSEAAEFLYHYRTLST------NSERNLSALWGKLAAEILLQDWDTAMDSLTKLKSVIDDNNFAPLLVQLQQRTWLMHWSLFVFFNHENGRNAIIDLFFQERFLNAIQTNAQHLVRYLAVAAVVNKRR----RNVMKDLMRLIEQESYQVSDPVTDFLQCLYTNYDFDGAQQKLQECEQVIDNDYFLTSCKEEFVENARMFIFETYCRIHNCIELKMLAAKLGMDEQSAEKWIVNLIRNARLNAKIDSQAGTVVMNMTFPSPTEQITEKAKDLSMRTFMLAN 413
BLAST of mRNA_C-linearis_contig10.579.1 vs. uniprot
Match: UPI001F04876B (eukaryotic translation initiation factor 3 subunit E-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04876B) HSP 1 Score: 379 bits (972), Expect = 1.440e-122 Identity = 208/441 (47.17%), Postives = 289/441 (65.53%), Query Frame = 2
Query: 251 SQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKNLNNTDEDPPDMVERRAEVFARMSALKEEAGVLTEIFADKIAVEEASMTQMDHSNFTPQQLSVEKVMKEQNFTWKGIKAELELEDSALESYYANAKFQSDCGDYVTAAFALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEP-FMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMDIEAAEKWIVDLIRGSKLDAKIDSRDNSVIMGGTFPSVYQQIMGKTKDLTVRSYTL 1570
++ DLT I YLD H++FPL++F+ + +Y ++V Q L+LL+ T M D AM+++K +N +E P +++E+RA+V + L+E++ +T++F D+ VE+A ++ F E + KE KG++ E A+E+ Y +KFQ +CG+Y +AA L Y + + P + ALWG+LA EIL+ NWD AL L LK ++ + P L+QLQ R+WLLHWSLFV+FNHA GRD L+ LF +P ++ AIQT CP +LRYL TAVI TK + V++DL++V+EQE +AY DP+TEFL+ L V F+FDGAQ +L ECE VL +DFFLC C +EF E AR FIFET+CRIH I IGMLAEK+ M E AE+WIV+LIR ++LDAKIDS V+MG PSVYQQ+M KTK L + L
Sbjct: 2 AEQDLTSKIGCYLDRHLVFPLMEFLSVKQVYDENEVLQCILELLNNTKMVDLAMDVFKRINPDEEIPEELIEKRAQVVKELKQLEEKSEPVTKLFQDEEFVEKAQTSRDGKHLF-------EFIQKE-----KGVEYE------AVENLYHYSKFQYECGNYSSAADNLYFYRILAHH-----TEPKTVDALWGKLASEILMQNWDAALVDLDSLKEVVDQNHYPELQQLQLRTWLLHWSLFVYFNHAKGRDLLIDLFLYQPKYLNAIQTMCPHILRYLTTAVITTKRR----RVVLKDLVKVIEQESYAYKDPITEFLQCLYVDFNFDGAQKKLRECETVLKNDFFLCGCIDEFRENARLFIFETFCRIHQCISIGMLAEKLDMSPEEAERWIVNLIRNARLDAKIDSEKGHVVMGTQSPSVYQQVMEKTKGLLFKCQVL 415
BLAST of mRNA_C-linearis_contig10.579.1 vs. uniprot
Match: A0A388K4K2_CHABU (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K4K2_CHABU) HSP 1 Score: 382 bits (981), Expect = 3.000e-122 Identity = 200/449 (44.54%), Postives = 291/449 (64.81%), Query Frame = 2
Query: 251 SQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKNLNNTDEDPPDMVERRAEVFARMSALKEEAGVLTEIFADKIAVEEASMTQMDHSNFTPQQLSVEKVMKEQNFTWKGIKAELELEDSALESYYANAKFQSDCGDYVTAAFALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMDIEAAEKWIVDLIRGSKLDAKIDSRDNSVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLA 1594
S+YDLT ++ +LD H++FPLL+F++ I+P D + +A++DLL TNM DYAM+I+K L NT++ P +MVERR EV + AL+E A L + V+E + E+ + + ++ ++ +E Y AKFQ DCG+Y AA L Y + + G+ ALWG+ A EIL+ NWD A+ + LK I+ + + PL QLQQR+WL+HWSLFVFFNH NGR+ ++ LFF+E +M AIQTN LLRYL TAVI+ K + +++DL++V++QE + Y DP+TEFLE L V++DF+GAQ +L ECE V+ +D+F+ ++EF+E AR FIFETYCRIH IDI ML+ ++ M+ + AE+WI++LIR +KLDAKID++ +V+MG PSVY+QI+ +TK L++RSY L N + A
Sbjct: 144 SKYDLTPKVAPFLDRHLVFPLLEFLQKEKIFPVDDIMKAKIDLLGKTNMVDYAMDIHKGLYNTEDVPQEMVERRVEVIGNLKALEEAAAPLISFLQNPSMVQE--------------------LRSEKQYNLQMLQERYQIGPEQIEGLYQYAKFQFDCGNYSAAADYLYQYRALCT------NNDRGVSALWGKFAAEILMLNWDAAMEEMNRLKEVIDSKSFSSPLLQLQQRTWLMHWSLFVFFNHENGRNGIIELFFQERYMNAIQTNAQHLLRYLATAVIVNKRR----RNMLKDLIKVIQQEHYTYADPITEFLECLYVNYDFEGAQKKLRECEEVIATDYFISPFSDEFIENARLFIFETYCRIHQCIDIRMLSVRLNMNDDDAERWILNLIRNAKLDAKIDAKAGTVVMGTQHPSVYEQIIERTKGLSMRSYMLANAVASTA 562
BLAST of mRNA_C-linearis_contig10.579.1 vs. uniprot
Match: A0A7S0RIX6_9CHLO (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RIX6_9CHLO) HSP 1 Score: 377 bits (968), Expect = 3.770e-122 Identity = 206/454 (45.37%), Postives = 291/454 (64.10%), Query Frame = 2
Query: 239 ATTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKNLNNTDEDPPDMVERRAEVFARMSALKEEAGVLTEIFADKIAVEEASMTQMDHSNFTPQQLSVEKVMKEQNFTWKGIKAELELEDSALESYYANAKFQSDCGDYVTAAFALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNA-PPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMDIEAAEKWIVDLIRGSKLDAKIDSRDNSVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLKQLAT 1597
A+ TSQY+LT I YLD H++FPLL+F+++ N +P ++V QA+++LL TNM D+AM+IYKNLNNT++ P +M +RR EV ++ + +E A L + ++ V++ + + + Q+ K+ EQ +E+ Y+ A+FQ DCG+Y A L Y ++ S ALWG+ A +IL+ +W+ AL + LK I+ N PL QLQQR WLLHWSLFVFFNH NGR+ ++ LFF++ +M AIQTN LLRYL AV++ K + +++DL+RV++QE + Y+DP+TEFLE L V +DF+GAQ +L ECE VL DFFL EEF+E AR FIFETYCRIH IDI MLAEK+ MD EAAE WIV LIR +KL AKIDS+ +VIMG +Y+ I+ KT+ L+ R+Y L +++ + +T
Sbjct: 2 ASPTSQYELTSKIGCYLDRHLVFPLLEFIQLKNTFPENEVLQAKIELLQKTNMVDFAMDIYKNLNNTEDVPQEMTDRRHEVVKKLKSSQEGAAPLVQFLSNGNLVKQLRQDKAYNLQYLAQE---HKIGAEQ-----------------IEALYSFAQFQFDCGNYSAAQEFLYHYRTLST------SNERSFSALWGKFAADILMQDWETALEDMGRLKEVIDAKNIFTPLNQLQQRMWLLHWSLFVFFNHENGRNAIIDLFFQDKYMNAIQTNAHHLLRYLAAAVVINKRR----RNMLKDLIRVIQQESYTYSDPITEFLECLFVRYDFEGAQVKLRECEAVLKEDFFLNTVWEEFVENARLFIFETYCRIHQCIDIKMLAEKLNMDQEAAELWIVKLIRSAKLQAKIDSKAGTVIMGAQHAGIYENIIEKTRALSFRTYELTSVMMRHST 425
BLAST of mRNA_C-linearis_contig10.579.1 vs. uniprot
Match: F0XWU6_AURAN (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWU6_AURAN) HSP 1 Score: 376 bits (965), Expect = 1.290e-121 Identity = 213/458 (46.51%), Postives = 285/458 (62.23%), Query Frame = 2
Query: 218 AVPAAPAATTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKNLNNTDEDPPDMVERRAEVFARMSALKEEAGV--LTEIFADKIAVEEASMTQMDHSNFTPQQLSVEKVMKEQNFTWKGIKAELELEDSALESYYANAKFQSDCGDYVTAAFALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTNAPPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCNCTEEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMDIEAAEKWIVDLIRGSKLDAKIDSRDNSVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNMLK 1585
A A S+Y++T+ IS +LD H++FPLLDF+E + Y A V +ARLDLL TNM DYA+EI L + + +VE V A M A ++ A V + E+ D AVE+ + ++ +T ++A+ + + Y+ AKF +CGDY A L Y + G +G ALWG+ E+L+ NW+GAL L L+ I+ APPLEQLQQRSWLLHWSLFVFFNHA G D ++ LF E ++QAIQTNCPWLLRYL TAVI+ K + ++DL+RV+ E DPVT+FLE L V FDF+GAQ L EC++ L SD+FLCNC + FME AR F+FETYCRIH KIDIGML++K+ M+ E AE+W+VDLIRG+ LDAKIDS+D+ V+MG SVY Q++ KT+DL+ RS L++ L+
Sbjct: 6 AQSTASKKVDASEYEVTQKISPFLDAHLVFPLLDFLEENTSYEAGSVQRARLDLLAPTNMVDYAIEIRSALGDAN---AALVEGAPSVEA-MEARRDAAKVQRVAEVLEDAEAVEQ--------------------MKRDGTYTAADLEAKHGIGPANWADYFEFAKFLYECGDYEGARDMLDHYLALCFPAGKK-LDASGFRALWGKFGSEVLLKNWEGALHDLGRLRAAIDDFGAPPLEQLQQRSWLLHWSLFVFFNHAKGHDGIIDLFLNEKYLQAIQTNCPWLLRYLTTAVIINKRR----RSTLKDLVRVITMEHDLKADPVTQFLECLYVKFDFEGAQRTLAECDKALRSDYFLCNCADAFMEDARLFVFETYCRIHTKIDIGMLSDKLVMEREKAERWVVDLIRGALLDAKIDSQDSCVVMGTDTTSVYSQVIDKTRDLSNRSAALLSALE 434
BLAST of mRNA_C-linearis_contig10.579.1 vs. uniprot
Match: A9SFG7_PHYPA (Eukaryotic translation initiation factor 3 subunit E n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A9SFG7_PHYPA) HSP 1 Score: 375 bits (962), Expect = 3.530e-121 Identity = 201/456 (44.08%), Postives = 294/456 (64.47%), Query Frame = 2
Query: 251 SQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVAQARLDLLDATNMSDYAMEIYKNLNNTDEDPPDMVERRAEVFARMSALKEEAGVLTEIFADKIAVEEASMTQMDHSNFTPQQLSVEKVMKEQNFTWKGIKAELELEDSALESYYANAKFQSDCGDYVTAAFALKSYCDITQTPGVPGSGPNGMGALWGRLACEILVANWDGALTLLRELKGCIEFTN-APPLEQLQQRSWLLHWSLFVFFNHANGRDELVTLFFEEPFMQAIQTNCPWLLRYLVTAVILTKAGAGGGKYVMRDLMRVLEQEKHAYTDPVTEFLEGLQVSFDFDGAQTRLEECERVLLSDFFLCN-----------CTEEFMEAARHFIFETYCRIHHKIDIGMLAEKMGMDIEAAEKWIVDLIRGSKLDAKIDSRDNSVIMGGTFPSVYQQIMGKTKDLTVRSYTLVNML 1582
+QYDLT ++ +LD H++FPLL+F++ + +Y DQ+ +A+++LL TNM DYAM+I+K+L +T++ P DMV+RRAEV R+ L+E A L + V+E + +Q + + ++ ++ +E+ Y AKFQ +CG+Y A+ L Y + + + ALWG+LACEIL+ NWD A + LK I+ + A PL QLQQR+WL+HWSLF+FFNH NG++ ++ LFF E ++ AIQTN LLRYLVTAVI+ K + V+++L++V++QE++ Y+DPVTEFLE L V++DF+GAQ +L ECE V++SDFFL +EFME AR FIFETYCRIH IDIGML++K+ M+ + A +WI +LIR ++LDAKIDS+ +V+MG P++Y+QI+ KTK L RSY L + L
Sbjct: 2 AQYDLTAAVAPFLDRHLVFPLLEFLQENQLYSDDQILKAKIELLAKTNMVDYAMDIHKSLYHTEDVPQDMVDRRAEVVGRLKVLEESAAPLISFLQNPALVQE--------------------LRSDQQYNLQMLQERYQIGSDQIEALYQYAKFQFECGNYSGASDYLYQYRTLCT------NSERSISALWGKLACEILMQNWDVATEEVNRLKETIDSKSFASPLSQLQQRTWLMHWSLFIFFNHDNGKNGIIDLFFSERYLNAIQTNAHHLLRYLVTAVIVNKRR----RNVIKELIKVIQQERYTYSDPVTEFLECLYVNYDFEGAQQKLRECEEVIVSDFFLGKQLSENGFVTIPLRDEFMENARLFIFETYCRIHQCIDIGMLSQKLNMNYDDAARWIANLIRNARLDAKIDSKMGTVVMGTQSPNIYEQIIEKTKVLGQRSYALTSNL 427 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.579.1 >prot_C-linearis_contig10.579.1 ID=prot_C-linearis_contig10.579.1|Name=mRNA_C-linearis_contig10.579.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=537bp MSEAVPAAPAATTTSQYDLTRTISKYLDLHMMFPLLDFVEMSNIYPADQVback to top mRNA from alignment at C-linearis_contig10:2646679..2654201- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.579.1 ID=mRNA_C-linearis_contig10.579.1|Name=mRNA_C-linearis_contig10.579.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7523bp|location=Sequence derived from alignment at C-linearis_contig10:2646679..2654201- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:2646679..2654201- >mRNA_C-linearis_contig10.579.1 ID=mRNA_C-linearis_contig10.579.1|Name=mRNA_C-linearis_contig10.579.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3222bp|location=Sequence derived from alignment at C-linearis_contig10:2646679..2654201- (Chordaria linearis ClinC8C monoicous)back to top |