Homology
BLAST of mRNA_C-linearis_contig10.556.1 vs. uniprot
Match:
D7FQH1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH1_ECTSI)
HSP 1 Score: 318 bits (816), Expect = 6.830e-99
Identity = 184/288 (63.89%), Postives = 212/288 (73.61%), Query Frame = 1
Query: 886 YMSHVGSHGPTPSADDGGVLLEG-EIWLPLVS-----REQEAAAXXXXXXXXRRFSPEGAGGRRVRLTRRPRGGAAVVEALRAVLEEAHVRQVVRLAGLYLARTMNEAEWYHRTAVILPRSSSAGGSTDLLVDIAAAHPSDTYQRTVAKAAIQDFAEEERSNAEGGFWMDRGIKDALDLNARNRLSETPLILGAQNASVEVVAALLEEEEAGTDIAALNANGCTALVLAAMLNKTAVVKVLVATYVARGLGVDHRTANGFSALHWAVVRGNADTTVDLVDARASINTG 1731
+ + + + + D G L G E WLPL+ + ++ + +R EG L+ R GAAVV+ALRAVLEEAH+RQVVRLAG+YL MNEAEWYHRT ILP G S +LLV I AAHPSDT++R AKAAIQD+AEEERS AEGG+WMDRGIKDALDLNARNRL+ETPLILGAQNAS+EVVAALLEE + TDI A+N +GCTALVLAAML+KT VVKVLVA YVARG GVDHRT NGFSALHWAVVRGN+D VDLVDA A+INTG
Sbjct: 28 HAEELSTRSASANGDSGNDSLIGCEDWLPLLPSRASRHDGDSGSGDHGVGDAQRGRGEGGD-----LSSSRRRGAAVVQALRAVLEEAHIRQVVRLAGMYLEGNMNEAEWYHRTGAILP----TGVSMELLVKIGAAHPSDTFRRKQAKAAIQDYAEEERSTAEGGYWMDRGIKDALDLNARNRLTETPLILGAQNASIEVVAALLEEPD--TDIVAVNEDGCTALVLAAMLDKTEVVKVLVAAYVARGQGVDHRTVNGFSALHWAVVRGNSDIAVDLVDAGAAINTG 304
BLAST of mRNA_C-linearis_contig10.556.1 vs. uniprot
Match:
A0A7U0TIW6_9TREM (Transient receptor potential cation channel 3 n=1 Tax=Cryptocotyle lingua TaxID=66766 RepID=A0A7U0TIW6_9TREM)
HSP 1 Score: 68.9 bits (167), Expect = 3.260e-8
Identity = 49/150 (32.67%), Postives = 77/150 (51.33%), Query Frame = 1
Query: 1603 VARGLGVDHRTANGFSALHWAVVRGNADTTVDLVDARASINTGRTERRQALWRLPIHKCAEYGSSACLQVLLKAGADPLVEDKLGMTPMHIAAGKGFLEILQIL--AAGGEHTAAVSVNVVSKTNGKTPLHYAVESLQLEAARFILGRGS 2046
V G ++ + ANG++ALH+A +RGN T LV I+ + L R PIH + + + LL ADPL + G TP+H A G LE++Q++ A + S ++ +G++PLH+AV + E ARF + G+
Sbjct: 193 VVHGAELNGQDANGWTALHYAAIRGNEVATRQLVQ-EPGIDIELEDHD--LMR-PIHMASLHKEVEITRQLLMVNADPLAMTQSGCTPLHFACATGDLELVQLILDAIMIRFKSTSSPFNITNRDGESPLHWAVANGYAEVARFCIEHGA 338
BLAST of mRNA_C-linearis_contig10.556.1 vs. uniprot
Match:
A0A4S2M3M5_OPIFE (Uncharacterized protein n=1 Tax=Opisthorchis felineus TaxID=147828 RepID=A0A4S2M3M5_OPIFE)
HSP 1 Score: 67.4 bits (163), Expect = 9.300e-8
Identity = 51/153 (33.33%), Postives = 78/153 (50.98%), Query Frame = 1
Query: 1603 VARGLGVDHRTANGFSALHWAVVRGNADTTVDLVDARASINTGRTERRQALWRLPIHKCAEYGSSACLQVLLKAGADPLVEDKLGMTPMHIAAGKGFLEILQILAAGGEHTAAVSVNVVSKTN-----GKTPLHYAVESLQLEAARFILGRGS 2046
V G ++ + ANG++ALH+A +RGN T LV IN + L R IH + + ++ LL A ADPL + TP+H A G L++++++ E T + N VS N G++PLH+AV + E ARF + G+
Sbjct: 112 VTHGAELNGQDANGWTALHYAAIRGNQVATRQLV-REPGINIELEDHD--LMRA-IHLASLHNELEIVRELLMANADPLAMTQARCTPLHFACATGNLQLVKLIL---EATLSKVKNPVSPLNITNRDGESPLHWAVANGYAEVARFCIQHGA 257
BLAST of mRNA_C-linearis_contig10.556.1 vs. uniprot
Match:
A0A167PJ38_9PEZI (Ankyrin repeat-containing domain protein n=1 Tax=Sporothrix insectorum RCEF 264 TaxID=1081102 RepID=A0A167PJ38_9PEZI)
HSP 1 Score: 66.2 bits (160), Expect = 2.430e-7
Identity = 45/145 (31.03%), Postives = 69/145 (47.59%), Query Frame = 1
Query: 1624 DHRTANGFSALHWAVVRGNADTTVDLVDARASINTGRTERRQALWRLPIHKCAEYGSSACLQVLLKAGADPLVEDKLGMTPMHIAAGKGFLEILQILAAGG-----EHTAAVSVNVV---SKTNGKTPLHYAVESLQLEAARFIL 2034
D R F+ HWA G A L+ + ++ + R R + AE G+S + VLL+AGADP +D+LG+TP+H AA G + ++++L G E T NV G+T L YA+ S ++ +L
Sbjct: 536 DSRLCGSFNMFHWAAFTGLAPYVAHLIARQPAL----LDARDGDGRTALSYAAELGNSEIVAVLLRAGADPRSDDRLGLTPLHHAAS-GNVGVVKLLLDAGVSPLIEKTKDTPYNVCHFHEHNRGETALEYAMRSRNVDIVTAVL 675
BLAST of mRNA_C-linearis_contig10.556.1 vs. uniprot
Match:
A0A0N4Z6E2_PARTI (ANK_REP_REGION domain-containing protein n=1 Tax=Parastrongyloides trichosuri TaxID=131310 RepID=A0A0N4Z6E2_PARTI)
HSP 1 Score: 64.7 bits (156), Expect = 4.870e-7
Identity = 58/204 (28.43%), Postives = 90/204 (44.12%), Query Frame = 1
Query: 1423 SETPLILGAQNASVEVVAALLEEEEAGTDIAALNANGCTALVLAAMLNKTAVVKVLVATYVARGLGVDHRTANGFSALHWAVVRGNADTTVDLVDARASINTGRTERRQALWRLPIHKCAEYGSSACLQVLLKAGADPLVEDKLGMTPMHIAAGKGFLEILQILAAGGEHTAAVSVNVVSKTNGKTPLHYAVESLQLEAARFIL 2034
+ TPL AQN E+V LLE AG A +A N + +L+ + G+D G ++ WAV GN D +++ G+ + +H A G+++ ++L++ G P ED +G TP+HIAAGKGF ++QIL E +VN V + +T L YA Q ++
Sbjct: 256 ARTPLHYAAQNGREEIVELLLE---AGARHNATDAYSSXXXXXXXXSNFKILRSLLM-----KNNGIDVIDKEGRTSFMWAVSSGNEDVVSEMLRHFNIPRNGKDNHQSTA----LHLAALTGNASICKILIQQGWMPTAEDHVGATPLHIAAGKGFTNLVQILCTSDE-----AVNKVDISQ-RTALFYAAFGGQAHTLNVMI 441
BLAST of mRNA_C-linearis_contig10.556.1 vs. uniprot
Match:
UPI001E8CE5B4 (uncharacterized protein n=1 Tax=Morchella importuna TaxID=1174673 RepID=UPI001E8CE5B4)
HSP 1 Score: 64.7 bits (156), Expect = 5.600e-7
Identity = 66/216 (30.56%), Postives = 97/216 (44.91%), Query Frame = 1
Query: 1294 YQRTVAKAAIQDFAEEERSNAEGGFWMDRGIKDALDLNARNRLSETPLILGAQNASVEVVAALLEEEEAGTD----------IAALNANGCTALVLAAMLNKTAVVKVLVATYVARGLGVDHRTANGFSALHWAVVRGNADTTVDLVDARASINTGRTERRQALWRLPIHKCAEYGSSACLQVLLKAGADPLVEDKLGMTPMHIAAGKGFLEILQI 1911
Y+R V I +A + A + + +G K N RNR ETP L A+ + + LL E D I A +A G TAL LAA + +VK+L+ T G V+ R G SA+H A+ N D + L+ A NT L L + + A +++ AG + +DKLG TP+HIAA KG + +++
Sbjct: 206 YER-VRSGTILQYAVLTNNLAFAKYLLSKGAKT----NTRNRHRETPHHLAARLGFISIARPLLNAERGEKDTPITDKTRECIDANDAVGNTALHLAAGRGEEVIVKMLLHT----GADVEARDDEGRSAIHRAISGRNQDMALMLIGKDADGNT-------PLHLLLHNHLDDDAVMAARCIMINAGTNVNTKDKLGRTPLHIAADKGLVSAVEL 405
BLAST of mRNA_C-linearis_contig10.556.1 vs. uniprot
Match:
A0A3N4KLU5_9PEZI (Ankyrin n=1 Tax=Morchella conica CCBAS932 TaxID=1392247 RepID=A0A3N4KLU5_9PEZI)
HSP 1 Score: 64.7 bits (156), Expect = 5.660e-7
Identity = 66/216 (30.56%), Postives = 97/216 (44.91%), Query Frame = 1
Query: 1294 YQRTVAKAAIQDFAEEERSNAEGGFWMDRGIKDALDLNARNRLSETPLILGAQNASVEVVAALLEEEEAGTD----------IAALNANGCTALVLAAMLNKTAVVKVLVATYVARGLGVDHRTANGFSALHWAVVRGNADTTVDLVDARASINTGRTERRQALWRLPIHKCAEYGSSACLQVLLKAGADPLVEDKLGMTPMHIAAGKGFLEILQI 1911
Y+R V I +A + A + + +G K N RNR ETP L A+ + + LL E D I A +A G TAL LAA + +VK+L+ T G V+ R G SA+H A+ N D + L+ A NT L L + + A +++ AG + +DKLG TP+HIAA KG + +++
Sbjct: 313 YER-VRSGTILQYAVLTNNLAFAKYLLSKGAKT----NTRNRHRETPHHLAARLGFISIARPLLNAERGEKDTPITDKTRECIDANDAVGNTALHLAAGRGEEVIVKMLLHT----GADVEARDDEGRSAIHRAISGRNQDMALMLIGKDADGNT-------PLHLLLHNHLDDDAVMAARCIMINAGTNVNTKDKLGRTPLHIAADKGLVSAVEL 512
BLAST of mRNA_C-linearis_contig10.556.1 vs. uniprot
Match:
A0A378K2C9_9GAMM (Ankyrin repeat protein n=3 Tax=Legionella TaxID=445 RepID=A0A378K2C9_9GAMM)
HSP 1 Score: 64.3 bits (155), Expect = 6.390e-7
Identity = 55/177 (31.07%), Postives = 83/177 (46.89%), Query Frame = 1
Query: 1402 LNARNRLSETPLILGAQNASVEVVAALLEEEEAGTDIAALNANGCTALVLAAMLNKTAVVKVLVATYVARGLGVDHRTANGFSALHWAVVRGNADTTVDLVDARASINTGRTERRQALWRLPIHKCAEYGSSACLQVLLKAGADPLVEDKLGMTPMHIAAGKGFLEILQILAAGGEH 1932
LN R+ TPLI A N EVV L+ E G D A+N + +AL +A + L+ + + D + ++ L A+V G D L + +NT TE L H CA + + +Q LL+ A+P V + MTP+ IAA +G+ E++ IL A +H
Sbjct: 86 LNERDVYGNTPLIHAAWNGHTEVVQWLVRE---GADANAVNISADSALFVALRFKHPDTARYLLTL---KNIKTDKPNSLSYTPLVIALVYGYLDIVDILYNQNVVLNTQYTENNTLL-----HMCAMINNLSSMQWLLEHDANPWVSNSHHMTPVRIAASRGYTEMVGILIAKMKH 251
BLAST of mRNA_C-linearis_contig10.556.1 vs. uniprot
Match:
A0A315VDT7_GAMAF (Protein kinase domain-containing protein n=8 Tax=Percomorphaceae TaxID=1489872 RepID=A0A315VDT7_GAMAF)
HSP 1 Score: 64.3 bits (155), Expect = 7.430e-7
Identity = 38/123 (30.89%), Postives = 59/123 (47.97%), Query Frame = 1
Query: 1597 TYVARGLGVDHRTANGFSALHWAVVRGNADTTVDLVDARASIN-------------TGRTERRQALWRLPIHKCAEYGSSACLQVLLKAGADPLVEDKLGMTPMHIAAGKGFLEILQILAAGG 1926
T + +GL T NGF+ALH A + NA+ +L+ + + T A++ P+H + YG ++LLK GAD ++G P+H+AA KGFL I+ +L G
Sbjct: 86 TLILKGLRPSRLTRNGFTALHLAAYKDNAELVTELLHGGSDVQQVGYGALTALHVATLAGHHEDAVFFTPLHIASYYGHEQVGKLLLKFGADVDASGEVGDRPLHLAAAKGFLGIINLLVGDG 208
BLAST of mRNA_C-linearis_contig10.556.1 vs. uniprot
Match:
A0A6A4JZ21_APOLU (Ion_trans domain-containing protein n=4 Tax=Mirini TaxID=236659 RepID=A0A6A4JZ21_APOLU)
HSP 1 Score: 64.3 bits (155), Expect = 7.680e-7
Identity = 42/136 (30.88%), Postives = 73/136 (53.68%), Query Frame = 1
Query: 1639 NGFSALHWAVVRGNADTTVDLVDARASINTGRTERRQALWRLPIHKCAEYGSSACLQVLLKAGADPLVEDKLGMTPMHIAAGKGFLEILQILAAGGEHTAAVSVNVVSKTNGKTPLHYAVESLQLEAARFILGRGS 2046
N ++ALH+AV+ GN+ V L+ I+ G R L A + CL++LL GA+P + D G++P+HIAA +G +++L++L + + ++V ++ G T LH + ES E +L +G+
Sbjct: 175 NQYTALHYAVL-GNSPEAVKLL-----IHHGTKLRDSVL-----QTAARANAVECLRILLVEGANPNLLDSHGLSPLHIAADRGNMQMLKVLL----YHPTIDIHVSTQEKGNTALHLSAESGNTECVACLLNKGA 295
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.556.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 24
0 1 Expect = 6.83e-99 / Id = 63.89 Expect = 3.26e-8 / Id = 32.67 Expect = 9.30e-8 / Id = 33.33 Expect = 2.43e-7 / Id = 31.03 Expect = 4.87e-7 / Id = 28.43 Expect = 5.60e-7 / Id = 30.56 Expect = 5.66e-7 / Id = 30.56 Expect = 6.39e-7 / Id = 31.07 Expect = 7.43e-7 / Id = 30.89 Expect = 7.68e-7 / Id = 30.88 Sequence D7FQH1_ECTSI A0A7U0TIW6_9TREM A0A4S2M3M5_OPIFE A0A167PJ38_9PEZI A0A0N4Z6E2_PARTI UPI001E8CE5B4 A0A3N4KLU5_9PEZI A0A378K2C9_9GAMM A0A315VDT7_GAMAF A0A6A4JZ21_APOLU Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Mammalia Seed ortholog score 66.6 Seed ortholog evalue 5.5e-08 Seed eggNOG ortholog 9978.XP_004594353.1 Preferred name NFKB1 KEGG ko ko:K02580 KEGG Pathway ko01523,ko04010,ko04014,ko04024,ko04062,ko04064,ko04066,ko04071,ko04151,ko04210,ko04211,ko04218,ko04380,ko04620,ko04621,ko04622,ko04623,ko04624,ko04657,ko04658,ko04659,ko04660,ko04662,ko04668,ko04722,ko04917,ko04920,ko04926,ko04931,ko04932,ko04933,ko05030,ko05120,ko05131,ko05132,ko05133,ko05134,ko05140,ko05142,ko05145,ko05146,ko05152,ko05160,ko05161,ko05162,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05202,ko05203,ko05206,ko05212,ko05215,ko05220,ko05221,ko05222,ko05321,ko05418,map01523,map04010,map04014,map04024,map04062,map04064,map04066,map04071,map04151,map04210,map04211,map04218,map04380,map04620,map04621,map04622,map04623,map04624,map04657,map04658,map04659,map04660,map04662,map04668,map04722,map04917,map04920,map04926,map04931,map04932,map04933,map05030,map05120,map05131,map05132,map05133,map05134,map05140,map05142,map05145,map05146,map05152,map05160,map05161,map05162,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05202,map05203,map05206,map05212,map05215,map05220,map05221,map05222,map05321,map05418 KEGG Module M00686 Hectar predicted targeting category other localisation GOs GO:0000122,GO:0000165,GO:0000976,GO:0000977,GO:0000980,GO:0000981,GO:0001012,GO:0001067,GO:0001158,GO:0001205,GO:0001227,GO:0001228,GO:0001775,GO:0001817,GO:0001818,GO:0001819,GO:0002218,GO:0002220,GO:0002223,GO:0002237,GO:0002252,GO:0002253,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002429,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0002682,GO:0002684,GO:0002757,GO:0002758,GO:0002764,GO:0002768,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003700,GO:0003705,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006109,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006468,GO:0006508,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0006979,GO:0007154,GO:0007165,GO:0007166,GO:0007249,GO:0007275,GO:0008092,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009612,GO:0009617,GO:0009628,GO:0009636,GO:0009719,GO:0009725,GO:0009743,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010743,GO:0010744,GO:0010817,GO:0010883,GO:0010884,GO:0010894,GO:0010941,GO:0010956,GO:0010957,GO:0012505,GO:0014070,GO:0016070,GO:0016192,GO:0016310,GO:0018130,GO:0019216,GO:0019218,GO:0019219,GO:0019221,GO:0019222,GO:0019438,GO:0019538,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030111,GO:0030141,GO:0030177,GO:0030656,GO:0031072,GO:0031098,GO:0031293,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031347,GO:0031348,GO:0031349,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032101,GO:0032102,GO:0032268,GO:0032269,GO:0032350,GO:0032351,GO:0032353,GO:0032368,GO:0032369,GO:0032371,GO:0032372,GO:0032374,GO:0032375,GO:0032479,GO:0032481,GO:0032496,GO:0032501,GO:0032502,GO:0032655,GO:0032695,GO:0032768,GO:0032769,GO:0032774,GO:0032870,GO:0032879,GO:0032881,GO:0032885,GO:0032940,GO:0032991,GO:0033256,GO:0033554,GO:0033619,GO:0033993,GO:0034097,GO:0034612,GO:0034641,GO:0034645,GO:0034654,GO:0034774,GO:0035094,GO:0035326,GO:0035556,GO:0035580,GO:0035690,GO:0035994,GO:0036211,GO:0036230,GO:0038061,GO:0038093,GO:0038095,GO:0042035,GO:0042036,GO:0042119,GO:0042221,GO:0042493,GO:0042581,GO:0042802,GO:0042803,GO:0042805,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043299,GO:0043312,GO:0043331,GO:0043412,GO:0043434,GO:0043565,GO:0044092,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045075,GO:0045083,GO:0045087,GO:0045088,GO:0045089,GO:0045321,GO:0045595,GO:0045597,GO:0045833,GO:0045892,GO:0045893,GO:0045913,GO:0045934,GO:0045935,GO:0045939,GO:0045944,GO:0046137,GO:0046483,GO:0046688,GO:0046885,GO:0046890,GO:0046903,GO:0046982,GO:0046983,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048535,GO:0048583,GO:0048584,GO:0048585,GO:0048731,GO:0048856,GO:0050727,GO:0050728,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050810,GO:0050851,GO:0050852,GO:0050896,GO:0051049,GO:0051051,GO:0051055,GO:0051090,GO:0051091,GO:0051092,GO:0051094,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051341,GO:0051354,GO:0051403,GO:0051704,GO:0051707,GO:0051716,GO:0060147,GO:0060148,GO:0060205,GO:0060255,GO:0060548,GO:0060556,GO:0060558,GO:0060828,GO:0060964,GO:0060966,GO:0060968,GO:0062012,GO:0062013,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070498,GO:0070555,GO:0070741,GO:0070848,GO:0070887,GO:0071214,GO:0071216,GO:0071219,GO:0071222,GO:0071260,GO:0071310,GO:0071316,GO:0071322,GO:0071345,GO:0071347,GO:0071354,GO:0071356,GO:0071359,GO:0071363,GO:0071375,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0090263,GO:0090304,GO:0097159,GO:0097237,GO:0097458,GO:0097659,GO:0097708,GO:0099503,GO:0104004,GO:0120025,GO:0140110,GO:1900125,GO:1900127,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902679,GO:1902680,GO:1902893,GO:1902895,GO:1902930,GO:1902931,GO:1903416,GO:1903506,GO:1903507,GO:1903508,GO:1904385,GO:1904629,GO:1904630,GO:1904631,GO:1904632,GO:1905952,GO:1905953,GO:1905954,GO:1990089,GO:1990090,GO:1990416,GO:1990776,GO:1990837,GO:2000112,GO:2000113,GO:2000628,GO:2000630,GO:2000637,GO:2001141 EggNOG free text desc. response to diterpene EggNOG OGs 35FGM@314146,38EM0@33154,3BACK@33208,3CUN1@33213,3J4Y8@40674,4827G@7711,491P6@7742,COG0666@1,KOG0504@2759 Ec32 ortholog description Ankyrin repeat Ec32 ortholog Ec-22_002990.1 COG Functional cat. K Best tax level Euarchontoglires Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko03000 Exons 18 Model size 2250 Cds size 2250 Stop 1 Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927341.0769634-CDS-C-linearis_contig10:2377938..2378031 1622927341.0769634-CDS-C-linearis_contig10:2377938..2378031 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2377939..2378031 - 1690879638.1040401-CDS-C-linearis_contig10:2377938..2378031 1690879638.1040401-CDS-C-linearis_contig10:2377938..2378031 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2377939..2378031 - 1622927341.0870724-CDS-C-linearis_contig10:2378903..2379095 1622927341.0870724-CDS-C-linearis_contig10:2378903..2379095 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2378904..2379095 - 1690879638.1190376-CDS-C-linearis_contig10:2378903..2379095 1690879638.1190376-CDS-C-linearis_contig10:2378903..2379095 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2378904..2379095 - 1622927341.0985868-CDS-C-linearis_contig10:2379792..2379909 1622927341.0985868-CDS-C-linearis_contig10:2379792..2379909 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2379793..2379909 - 1690879638.136201-CDS-C-linearis_contig10:2379792..2379909 1690879638.136201-CDS-C-linearis_contig10:2379792..2379909 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2379793..2379909 - 1622927341.1127138-CDS-C-linearis_contig10:2380237..2380355 1622927341.1127138-CDS-C-linearis_contig10:2380237..2380355 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2380238..2380355 - 1690879638.1470773-CDS-C-linearis_contig10:2380237..2380355 1690879638.1470773-CDS-C-linearis_contig10:2380237..2380355 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2380238..2380355 - 1622927341.121989-CDS-C-linearis_contig10:2380770..2380865 1622927341.121989-CDS-C-linearis_contig10:2380770..2380865 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2380771..2380865 - 1690879638.1574743-CDS-C-linearis_contig10:2380770..2380865 1690879638.1574743-CDS-C-linearis_contig10:2380770..2380865 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2380771..2380865 - 1622927341.1313038-CDS-C-linearis_contig10:2381292..2381403 1622927341.1313038-CDS-C-linearis_contig10:2381292..2381403 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2381293..2381403 - 1690879638.1740992-CDS-C-linearis_contig10:2381292..2381403 1690879638.1740992-CDS-C-linearis_contig10:2381292..2381403 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2381293..2381403 - 1622927341.140846-CDS-C-linearis_contig10:2381780..2381888 1622927341.140846-CDS-C-linearis_contig10:2381780..2381888 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2381781..2381888 - 1690879638.182758-CDS-C-linearis_contig10:2381780..2381888 1690879638.182758-CDS-C-linearis_contig10:2381780..2381888 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2381781..2381888 - 1622927341.1529455-CDS-C-linearis_contig10:2382356..2382446 1622927341.1529455-CDS-C-linearis_contig10:2382356..2382446 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2382357..2382446 - 1690879638.1906776-CDS-C-linearis_contig10:2382356..2382446 1690879638.1906776-CDS-C-linearis_contig10:2382356..2382446 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2382357..2382446 - 1622927341.1662748-CDS-C-linearis_contig10:2382630..2382744 1622927341.1662748-CDS-C-linearis_contig10:2382630..2382744 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2382631..2382744 - 1690879638.1990802-CDS-C-linearis_contig10:2382630..2382744 1690879638.1990802-CDS-C-linearis_contig10:2382630..2382744 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2382631..2382744 - 1622927341.1818593-CDS-C-linearis_contig10:2383300..2383369 1622927341.1818593-CDS-C-linearis_contig10:2383300..2383369 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2383301..2383369 - 1690879638.2208683-CDS-C-linearis_contig10:2383300..2383369 1690879638.2208683-CDS-C-linearis_contig10:2383300..2383369 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2383301..2383369 - 1622927341.1948693-CDS-C-linearis_contig10:2383846..2384074 1622927341.1948693-CDS-C-linearis_contig10:2383846..2384074 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2383847..2384074 - 1690879638.2352414-CDS-C-linearis_contig10:2383846..2384074 1690879638.2352414-CDS-C-linearis_contig10:2383846..2384074 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2383847..2384074 - 1622927341.2052405-CDS-C-linearis_contig10:2384487..2384625 1622927341.2052405-CDS-C-linearis_contig10:2384487..2384625 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2384488..2384625 - 1690879638.246099-CDS-C-linearis_contig10:2384487..2384625 1690879638.246099-CDS-C-linearis_contig10:2384487..2384625 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2384488..2384625 - 1622927341.219377-CDS-C-linearis_contig10:2385203..2385311 1622927341.219377-CDS-C-linearis_contig10:2385203..2385311 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2385204..2385311 - 1690879638.2565372-CDS-C-linearis_contig10:2385203..2385311 1690879638.2565372-CDS-C-linearis_contig10:2385203..2385311 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2385204..2385311 - 1622927341.2279859-CDS-C-linearis_contig10:2385950..2386022 1622927341.2279859-CDS-C-linearis_contig10:2385950..2386022 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2385951..2386022 - 1690879638.2719064-CDS-C-linearis_contig10:2385950..2386022 1690879638.2719064-CDS-C-linearis_contig10:2385950..2386022 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2385951..2386022 - 1622927341.2368135-CDS-C-linearis_contig10:2386449..2386541 1622927341.2368135-CDS-C-linearis_contig10:2386449..2386541 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2386450..2386541 - 1690879638.2801728-CDS-C-linearis_contig10:2386449..2386541 1690879638.2801728-CDS-C-linearis_contig10:2386449..2386541 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2386450..2386541 - 1622927341.2484605-CDS-C-linearis_contig10:2387009..2387368 1622927341.2484605-CDS-C-linearis_contig10:2387009..2387368 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2387010..2387368 - 1690879638.2880285-CDS-C-linearis_contig10:2387009..2387368 1690879638.2880285-CDS-C-linearis_contig10:2387009..2387368 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2387010..2387368 - 1622927341.258-CDS-C-linearis_contig10:2388171..2388268 1622927341.258-CDS-C-linearis_contig10:2388171..2388268 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2388172..2388268 - 1690879638.2959847-CDS-C-linearis_contig10:2388171..2388268 1690879638.2959847-CDS-C-linearis_contig10:2388171..2388268 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2388172..2388268 - 1622927341.2685676-CDS-C-linearis_contig10:2388346..2388395 1622927341.2685676-CDS-C-linearis_contig10:2388346..2388395 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2388347..2388395 - 1690879638.3040223-CDS-C-linearis_contig10:2388346..2388395 1690879638.3040223-CDS-C-linearis_contig10:2388346..2388395 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 2388347..2388395 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.556.1
>prot_C-linearis_contig10.556.1 ID=prot_C-linearis_contig10.556.1|Name=mRNA_C-linearis_contig10.556.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=750bp
ADTEGKIGRTRGRTSPNERAPAEVAGVRLATSSRLRHPRDPGSPENAYRK back to top mRNA from alignment at C-linearis_contig10:2377939..2388395-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.556.1 ID=mRNA_C-linearis_contig10.556.1|Name=mRNA_C-linearis_contig10.556.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=10457bp|location=Sequence derived from alignment at C-linearis_contig10:2377939..2388395- (Chordaria linearis ClinC8C monoicous)GCAGACACGGAGGGCAAAATAGGTAGAACTAGAGGCAGGACATCTCCAA G
TGGGGAAAGCACGGCAACAACAGCAACAGAGCGAGGGAAAGCGGGCGGAT
TAAAAGGAGCCAGAGCAGTGGGAGGAGATGAAAGAGCACCGGCAGAGGTA
GCAGGAGTGAGGCTCGCAACCTCTTCGCGGTTGAGACACCCTCGAGACCC
AGGCTCGCCAGAAAACGCTTACAG GTAGGATGCATTATTTCTTATGATGA
CCATGATTTGACATCTCAAAACCCAGGGCTTGCTTACGTAGCGGTGAAGG
AAAAAAGCAGAGGTATGGACGTTGTTCTCGAAGTCGAAGGGACCCTTGAA
CTTTTCCCGCTTCGGTTGTCTGCCGGTATTTGCCCTATTTATAAATCAAC
GGGATCAAAGAAATAACCTCCCCTCAAAGAGACAAATACCTAAGTGGCGG
ATTAGCAGTTCAATACAGTGACGTATTGTGGGATAGGTGGAGAAGAAAAA
CACTTAAAACTGGGAAAACGCCCTATTTCACCCAAACGTCAAAGACCCGA
CCGATCATCCTCCCCAATGATTGTTCAATGAGAAGAAGGTCGGCTGCACA
TGGGGTGGGTGGTGTGAATTGCTCATCAAGTACGGCACTTTTAGGGATGC
AACAATGGCTACCACCCGGTAGTGATGGCCATCGTGCTGCACCCTTAAAT
TGATTGTATCTGTTAACATTTTTTTGTTGTTGTGTACCTTGCCCGTGAGC
CCTTGATTATCTTCCTTCATCAACCCCACCCCTCGTCAAACCTTCGTACT
CCTCCCTCTCGTTCAATCACACGACACGTAGTACTTGACAGCCAAAAAAC
ACAAAAAAAACGAAAGAGGAGTAAGAGAAGCCGGCTTTGAAACCACGCGC
ATCCTGCCTAGACTAATGCAAAACGCTTTGCAGAGCCGTCATCTTACCCA
GAGCTCCAAACGGCCAACCGACCCCAAGACCAAGCGTCCGAGTACACACC
GCCCTACCAACCACGTGCTTCCCGCAGAAAAGCCGTCGAGGCCTACCTGG
CACCGCCGGTCAAGACATGTTACTCCGGCGCACCCAACGGCGGCAGCAGC
ACCAACCAGAGCGAACTCCACCGGCAGTCGCGAAGCCTGAGCCCCGCGGC
AGCGCAGCTGAGCCGGTGGTGCTCTCCGACACGACCTTCCGCAGGCCCCC
CCACCAGCGGGACGGGTGTTCACGGTAGTAATCCTCCTGGGGCTGGAGCT
CCCACCGGTCCTTCGAGTGCCGCCGTTGCTTCGTTCAAAAAGGAAGGGGT
TCCACCGCTTTTGCTGGCCCCGGCGGAGTGGGGGATCGGTTTGGGTGGGG
AGTGGGTCTCCGCTAGGGGGCCGCATACCATCCGAG GTGCGTCCTCTGAA
AAAAGCAAACGGAAATCGTTCAGCAGCGCCTCTTGCTTACATGGCTTCAA
AAGGGCGCCGTTTCGCTACGTTGTCGAAGTGCCACGTCGCAGGTTTACTC
TGCTAGCGAGGGAAGGAATCGGCCAGATGCCGACGTACTACTTCTACATA
CCTCCCGTGGGGAGCGTCATTGCTCCCCCGTGCAAGACAGACGCAACAAA
AATATGTTCTAGTCACTATAGTATGGGTATCGTGTACCCTACCCCTGCGT
TGCCTTTGAAAACATGTTGGCCGTTGAATTGTTTTTGTTTTCCTCAAGGT
GGGCAGGGGTTGTCCTGGCCTTCTTAACACACCTTCCCCGACGCACCCGT
TACTTTCCCGCTCGCCCATCGTTCCTTGCCTTTCCCTTGCCTTCCTTTGC
CGCCAACAAACGACCTTGGCTGACGACTGACTGGTGTCACGCTGATTACC
CTAGCCGTCGGCCGAGTGTCGCTCACCTGGGCCGACATCCGAGGCAACAC
CCTTCTCCACCTAGCTGCGCAGCACAACGACGTCGCTCTCGTGCAG GTGC
GCCGACGAGAGGGGAGAGAGCTTAGCGCCAGGATGAGGGTTGGAGTTAGG
CTTCGGGCCGGGGTCAGGGTCACATAGCAAGAATAATGCGGTTCCGGGGT
TAGACTTCAAAGAAACGTGAGGGGTATCGACACAAGAAATGAGGGAGTGC
GACAGCGCGGGGGTCAATATACCGTTCGGACCGTACAGCAACGAAACATC
AGCAGTACGATGATGCATGCCACACTGTTTTACGTGCCTCTCCGTCTCTC
ATTCTCTCTCCAAGGACGAAATCGATCTACCCCGAGCTTAGCCTCAAGTC
TAATTGGTCCACTGTTCCATCTCGTCTCGTAGACTGCCCAACAATGTAGC
ATGCCTGAAATCTGACGAACCCTACACCAACCCTTACCACAACCGTAACC
GTAACGGTGTCCTGACAAGGAAGGCCGTTTATGAATGCGAGGAGAGAAGA
AAGAAAGCCCTTGAGAAGAAGGAGAGCAGGAGAGAGAGGGTGCTG GTGCG
TACAGTACAGTACCTCCTGGACGACTCGGGGTTAGGGGTTCGGGGTAAAT
CTAGACAAACGGTCGTCGACGGGCCATCCTCCCCAGTGATCGGAACACCT
GTGCATGTTACGCCAGATAACCTTCTCAAACCTGCCAGTTTTATCGACCA
AGGAAGGGGGTGGTGTAGATACGTCCCTGTTGGCTACCTTAGGGGCCCCG
GAATCGAAGGTTGCAGTAAACAAAACTGTGCATGCAGCGTACATACGACA
GAAAGCTTACAGCGAACGCGATTTTTGTGTTGTGGAACTCGGCGCGTCTG
TTATAGCAAGGATGGGGACAGCCTTGCTTCGTTCTTTGACCGGGTGAGCC
ATAAGGGGTAATGTCGACGTTAATAAATGACGGAATAAACCTTACCTTGA
GTTCACGAGTTCACGCTTCCGAAGCGATGAGTTTCCCGCCGGGATGTCCC
TGATTTAGCTGTCAAAACGTTTATTGTTTTGCTGCGGTATGCTTCAAAAT
ACTGGAGTACTTGACAAGTTGGATGAACAAACCTCCTACATAAAGTGATC
CCACGGTCCCGAGACACGTTTGTGCCACAACGATCCTACAAGTATTATTG
TGCCGTTCGTGTGCTTCACGAACCTCCTCTGCAGGAGAGGGCCCGGGCTT
GGAACGAGCGGGCCCCGAAGGAGGCCACAGAGCGGAAAGTCCCCGAAAAG
GCGACCGCTCTCAAGACCAAAGACATCCTGAGGCGCATCAAG GTCAAGAC
GCCGTTCGTTGCCGTTACCCGAAGCCCACTAAATCGGATTTGGTCTGTGC
GAAACTAACCTATCTATGTCCAACTGCTGTATTCCATTAGTCTAGGATTT
TCATGCGGATATTTTTCCCTAAAATTTCATCCTCTCACCCTAACTCCCCG
CCGACACAAAACGGGGCCGGGTAGACGTTGAACATTTCCCTACAGACGCA
TGAAGGGGAAGCGAGTCGAAAAGCCTCCCTGTAAGTACGTGGGTTGAAGA
AGATATCACAACCCGGCACCGACGTCAGAAGCTACCAAAATCTCGATTGC
TCGACTACTGGCTGGTGCTGTCTTGGAAAGGTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCCTCTGGTCTGAAGCCTCACACAACA
AATAAATGCGATATAACAATGTTTCTTTCGGATTCAGCGGCGCCATATAC
TTTCGACCCGACGCGCCGCATTGCGCGTCTGAGGTTTGAACTCTGCCCTC
TGCACCACAAAGAGGACCCCACGTTGCTATTTAGTTCTAAGCATCTTCGC
GCCCTGGTATACTTGCACAGGAAGAAATTGCGGAACAGGAGAAGACGACA
ACCGATGTAGTCAACGATGCAACACCTGCTGTCGACGACGTCGGCGACTT
TTCCAACAAGGTGAGCAAAGCACATACATACATGAGCCATGTTGGAAGTC
ATGGACCG GTAGTCGCAACGGCTACAGTCACGCCTCGCAACCAACGGAGC
CTGACCGGCTGCCTTGAAGGCACTTCGCCGCGGTGTATGTACTTTTCCCC
GAACCCGTCCAATACAACACTCGAACGACGAAAGGAAAGGCAACAAGAGA
TACGTCTCCCGTAGTCCCAAGTTCCCCTCCACGACAACCACCGATTTATT
TACTTGTTTCCGGCGATTGCGGCAGAAGAAGCCAGGTCGTAATGTAACTG
AGGGGACGACAGACAGGTCGGAGGTCGGAGTCCGCAAACGCGATACAACA
CCGTTCATTTATTCCTTCCCCCCCCGCCTCCATGGTGCCCAACCGCCGTG
CCCCCGACACAACATGAAACCGACACGTTCATCCTCGTTCGAACCAGCAT
GCGGGTATCTCTCAAAGGGAGACGCCGTCCGCGGACGACGGTGGTGTCCT
TCTCGAAGGTGAAATCTGGCTGCCGCTGGTGAGCAGAGAACAAGAGGCAG
CAGCACCCGGCGGAAGCGGCGGCGGCGGCCGTCGTTTTTCCCCTGAAGGG
GCTGGCGGACGAAGAGTACGGCTGACAAGGAGGCCGAGAGGAGGAGCCGC
TGTCGTCGAAGCCCTTAGGGCTGTCCTCGAGGAGGCGCACGTGCGGCAG G
TGATGGTGGTGGTGATGGAAAATTGAACCGTGTCCTGAAGCGCAAAGAAA
ATGAGGCGTTTCCCCTGCACCAACACGAAGCGGTAACCATAGGAGACGCG
CTTGTTTTGCCATTTGCCACACTGCACCCGTTCCGGGTCCCGACATAGCA
TCGTGGAAGACCGAAGAAGCTCAAGAGTTACCGGATCTAGGAGAAGGTGC
TGATGGAGCTAGGATCTATTTGCGTTCTTACTCGAAATACATGTACTTCG
TATGTGTTCTACGTAAAACCTTCATTAGATCCCCATGCCCGGCCGGGTAT
GGTCCTTTGACTCCTCCCCCCGCCAGAGAAAAAAATGAGCCTCCTCCCTC
TTTCCTCCCCGATACGCGGCGAAAATCATCACGTTCTCTACGGGTAGCGA
TTCACACCCTCGCACCGTATGAAAGCTACACAACACCACGTCAGAGTTTC
CCAACTAAACACGTGTTGCGCTACAGGTGGTACGGCTTGCGGGCTTGTAC
CTGGCGAGAACCATGAATGAGGCGGAATGGTACCATCGCACAGCG GTAAG
AAAGAGCCGCAGACAACGAGGGGCAGAAGGACGATGACTGTTTTGGCAAA
ACTATGTAGTTGTTGGTGAAACTGCTGGAAAGCAACACAATGCGCGGTGC
ACGCTACGTGCGGGTTGTCCTTGCACTTCAAAGCCAAAAACGTTTCGAAA
CTGTGAGGAATGCAAGGTCCAGGGTTCTTGTACCTCAAAGGTTCCCCTGA
AAGTATGCGCGAGATTGGCTTGTGGCTTTATATTCGGCGGTGGGAAACGT
ACATACATGTAGTTGGCGAGGAAGACGGTATCATTTACGGTACGTCTCCA
GGAAGGGGTGAGAAAAGTACTTGTACTTGTACATACATACGTACGTACGT
TTGTGTGGCTGATGCTCTAGCACTTCACTCAGCCTTGGTCGCGTCGCGGT
GGCGACAGTTAAAAAAAAAAACACAAGAGAGGGCAGAGAAAAAGAGAAAC
AACAATGATATCACAACCATCACCACCACCACCACCACCACCACGCACGG
CTAACCACACAGCTTTCTTTCTTCCGGTTTTTTGTCTGTCTCTCACCGAA
GGTAATCTTACCAAGAAGCTCGAGCGCCGGGGGATCGACCGACTTGCTAG
TGGATATCGCCGCGGCGCACCCCTCCGATACCTATCAACGTACGGTAGCT
AAGGCTGCCATTCAG GTATCTAGTCTACAAACATGTATCCCGCATTATGC
CCGGCCTGGGTTAAAAATAATCGGCGTGGGAAACCTGTTCGCCCGTTATT
TCACCGATTGACTTCACTGTGCTGAGGAGGAGATTGGTGCGCACTCAAAG
GATTTAAAATGCATGCAAGGTCTCATACCCTTAGGCCATGAACTGAAAGG
ACTTTGCGGAGGAGGAGAGAAGCAATGCGGAAGGCGGGTTTTGGATGGAC
CGAGGGATCAAGGACGCGCTGGACCTCAACGCTCGGAAC GTAAGGGAAGC
TGATTGAGAGATACAAGTAGGCCTAAGATGCAAAACCGAGGGGTTGTGAA
CGTCCTGTTATGTATCACCGGCAGGTACACCGAAGCATACATGAGTTATA
GCCGGCCACCCGCTACATGCGTTGCAGCTGATCACGCACGTTACATCCGG
TACGCCCGATCGCGCCCGTCACATCGTTCCACTCGGTCACACCCGTTACA
TGGCGTTGGGTGAGCAGACGGAGACTGGCACCAGAGTTGATCGGAGTGAA
CAGTTTTTAGCAGCCATTGACGCAATCCTAGGGCTTAAGCCAACGTACCG
TGCCGTGAGAGAAGCCCAGCGGCGAGCTCGATACGTTACACCACATAACT
TGGAGGGGGAGCAGACAAAATACTTGTGGCTGCTCTAGGTAGGGTAAGAC
TAGGTCTCAATGAACAGTATGAGCATCTACGCCGACAATTAATCCCCTCC
TAAACAGCGACTATCGGAAACCCCACTTATCCTGGGAGCTCAAAACGCTT
CTGTGGAGGTTGTGGCAGCCCTTCTGGAAGAAGAAGAGGCGGGCACGGAT
ATCGCAGCGTTGAAC GTGAGCGCTCCAAATGCTATTTATAATGTTTACAG
CCTTTCGCCATTGGCCACCTCGGGAATGTGCATGAGTTCTGACTGCGGTG
CTCTCACCTGTGGTTGTCTGCACAGATATGTGAGAGCACGACTCGGGCGG
GCGGGCGGGCGGGCGGGCGGGCGGGCGGAAGAATGAATAACCTCAGCAAA
GCAATGGCACTTATTGTAATTCTCCTCAACATTGTTCGTCTCTGTTGCCT
GGACATCTGGCATTTTGGCACACTGACTACGTGCTAACGTCCTCGAACAT
TCACAATCTTCGAAGCACGTATGTATTTGGTGCATATATGAGGCATCTTG
GCGTTTGTTGTTGTTTGCTGTGTTCTCAAACTGGCTGCGCAGGCGAATGG
CTGTACGGCGTTGGTATTGGCCGCGATGTTAAACAAGACGGCGGTCGTCA
AAGTGCTCGTGGCGACATACGTCGCAAGGGGGCTCGGGGTGGACCACCGG
ACG GTAAGTGGGGATGGGATTGGACGGCGTTGCTGGGTTTTTCTACCGTC
GGTGGCGTGAGTGCTAAATACAGTGGGGGCGCCCGCTGTCGAAAGAGAAA
TTCTCACAACAATAACGGGATCAGATTCCGTCAATAATAATAGTAATAAT
AACAATAATAATATTGGGCAAGAAACGTAGCTCGATCGTGGATCCTGCAC
TAAACCTCATACAAAGTCCTACGCTCGAACGTTGGCGACGAAACTAGAAA
TTGAGCCTCGACCTCGTACTTTACGTGTCTTGTCAGCTGGCGCCCACTGT
GTACTTTGGGCATTGCTGCCGCTGAGGCCGTCCGGAACTGAGGTGTCGAA
GGTCAGCGATATAATTTATGATGTATTCTTGAATAATAGGGCATTTCCCC
TCTGAATTTACGCTTGCTGCCACCCAGCAGGCGAACGGGTTCTCCGCCCT
CCACTGGGCCGTGGTACGAGGCAACGCGGACACTACGGTTGATCTCGTGG
ATGCGCGGGCATCCATTAACACCGG GTGCGATGGATCAGTACCCATTATA
CCGCGTTTTCTGCAATCACGACACGGTTACATTGCAAGTATTGGTTCTGA
AGGGCTCTACCTGGAAGAAGCGAAAATACGGCACTTCGAGTAGTTTCGAT
GTTGCGGCGTTTGTGAATCTGGATGTAAATGGCTCACTTACCACCGCGAT
GCTTTGAAGATTTTTCCACGCTTCCAACAATGCCCGATAATGTCGCTTAT
TTCTTCTCGTTCGCAAGGTTTAGTGTCTAAGAACCCAAAGAACCCTGGCA
AGTGTTGTCCGGGAGTTCTTAGAGACATTCCCAGTTTCCAAGCCAAGGAT
GCAGCCTGGGCCTAAGCAAGCGCTTCTGATGAAGTGCCCTCGGCCAAAGC
AAGCGCTTCTGATCAGATGTTCTCTGCTGTCACGAAACAGGCGCACCGAG
CGTCGGCAAGCTCTTTGGCGACTGCCGATCCACAAGTGCGCCGAGTACGG
CTCCTCGGCCTGCCTCCAAGTCCTGCTAAAAGCGGGAGCGGACCCTCTCG
TCGAGGAT GTGAGACACCCCGCCATACCTATCTATGCCCCCCCCCCCGCT
ATCTGCTGTAATCCACTGACTACCCGAACAGTTATTTGTGGCTTCGTGCG
GGAACTCGACCAACTGTTCCGCAACAACGCACCATTTTGTGCCTGGCACG
GAAGCTCTCTTCCGTTGGCAACTAACGGTACTTCCGTTGGTTGCCAACGG
TACATGGGCTCTTCCTAATCCTGTACCATCTAAGAGCAACCTACCCGGAA
CTTATGCACGTCCCAAAATAGAAGGCAGCTTCCCCAACACCTCTCTTTCA
TCATTACACCGCCCTTCCCAAAAAACAACCGTTTAGAAACTGGGGATGAC
GCCCATGCATATCGCAGCCGGGAAGGGATTCCTGGAAATACTGCAGATCC
TTGCAGCTGGTGGAGAGCACACCGCCGCGGTTAGCGTCAACGTGGTCAGC
AAG GTATGCAAGCGATACAAGAATAGCTGCGCAGAGGAGAAGATGGAGGA
ACCGTTCTCTTTTTGCGTTGTTTTTTGCAGGATTAGACTACTGCTGTAGG
ACCTCAACGACTAGAAGAATGGCGCACAAGTTTGTTTGAAGTGTCCTGCG
CATGCGGTAAATGTACCAATATGTTTTTTCGGCTACGGCCCTGTGCCGAC
CGACAGCTACCCGTGCACTCGCAATTGGAGAGATGTCAGCGATTACTAAT
CTGCACCATTCGTACATACATACATACATACACATACGCAGAAGAAGTCG
GCTTGCTGGTGTTCGCCGCGTTGTTGACCAACAAGCATTTTCACCGGGTC
GACTTCTTCTGCCTCCTGCAAAAACATGGTTGCTTGGTTGATGCACTGAT
GATGAGCAGATCGAGCTTAACGAGAGTTGACCCTTTCCTGACAAGCACCC
AACGCACCCCTGGAAATCAACAAGCTAATCAACCGTCTTTGTTGCGATTG
ATTTTGTAGGTGGAAACCCAGAGCAATCAATCAGCCTACTTACCACAGTT
AGTTGCCCCCCGGGAACGATATCTTCACAACTAATTTGAGTCTCGATTGC
TGGCGGCGCCGCCTTGCGGTAACACCTTGCTTCTCGCGGCGACCCGCCCT
GACCTGACTGTGAGTGAATCAATGGCTAATTCGCACTCTGTTTTTTCCAG
ACAAATGGCAAAACGCCTCTCCACTACGCGGTCGAAAGCCTGCAGCTAGA
GGCAGCACGCTTCATCCTCGGTCGTGGTAGTGGTAGAGGGGATATCGATG
GAAACGCGGACGCCGCTTCCCCTGCCAGACCAAGAGGCAGAGAGGCGGAG
GGGATCAAACTCCTGGATGCCTCTCAACGAACCAAGCTCGAG GTATTATT
ACGTGTACGTACTACGCGGGTTGAGATGCAGAATTGGCTTCGTTTCGTTT
GTTCCGCGTGGTGGGTGGGCGATTTACTACACTACACTCTACCTGGCACA
TAAACCAGTACCAATAATGGAAGTCAGAACATCGCTTCCACAATAGACAA
GCAGGCCCATGGAAGTAGGATGCAGGCCCGTCTACTTCTTCTATGGAAGT
CGTGTTCTTTGCTTCCATTGAAATCGTTGGCTTTTTTCGCGGAGGAAGCG
ATCGGGGTTTTATGGACGCAGCGGGCAGAGGGAGCCCGAGCAGTGTTAAT
TTTGTTTCGATTTTTGTCGAGAGTCACTTCCACAGCGAAGGGTTGCTTTG
CCAGGGTTGGGGGATATACTGTAGATCCAGGGTCAGGGTTGGGGAACAAT
TTGTTTTTGTCGGAACGGTTTCGGGAAAAACTTGCTTTTTTGTGGAGGGA
GTCGTGGCAGTTGGTTGGTTTTTCCATTGAACGAAGTCACGAATCTGTCG
ACGAAACAACGCCTAAATAGTGTGCATATCGGGTTTCACAACTCTTCTCG
AAATGTTAAGAGGAACTTAGAGGGGGGCCAATGAGAAACGATAGTGGCTA
CAGGTAGGGCTGTAGTGCTACACAAGAACACGGCACGGTTCCTGGAACGA
ACAACGCCGAGAACAAGCTGACTTCAACATCTAACGCGCATTCCGTCGGA
AGTATCTGTCAGCGGGTTAGGTTCATCTATCTATCTATGGCGTCGGATGC
CGGTTTCTCTTCTTGGTGGTGCTAAGAATGACACAGACAGGCATCCCTCA
TGTCAGGAAAAACATCCGAGAATTGCTCCACCGTCGCGCCCCTTCCCCCA
ACCCTGTTCCGAAGGTGATGCTGGCCGCTGCCGCAAAGGAGGAGCGGGGA
GTGCTTGCTTCCGGCTTAGCTTCACTTTCGGAGTTCGTGCAGAAGGTCTT
CTTATAA back to top Coding sequence (CDS) from alignment at C-linearis_contig10:2377939..2388395-
>mRNA_C-linearis_contig10.556.1 ID=mRNA_C-linearis_contig10.556.1|Name=mRNA_C-linearis_contig10.556.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4500bp|location=Sequence derived from alignment at C-linearis_contig10:2377939..2388395- (Chordaria linearis ClinC8C monoicous) back to top