mRNA_C-linearis_contig10.549.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig10.549.1
Unique NamemRNA_C-linearis_contig10.549.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig10.549.1 vs. uniprot
Match: D7FQH7_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQH7_ECTSI)

HSP 1 Score: 479 bits (1232), Expect = 3.480e-162
Identity = 220/278 (79.14%), Postives = 249/278 (89.57%), Query Frame = 1
Query:    1 LVLPCAPSDSEKVMYHASGRWVVLATGFISYCTLLVGMCLFTQSSAYFYWYGAPTAFALVYMCCYYFGVSMWGKDFEPDVHEDILRKG-QAAYTATVDVFLPVCNEPTVLLANTWNHVLALDYPHLIVHVLDDGGKDEVKALAEKYGFEYIRRDNRPELKKAGNLRYAFARTSGEAITIFDADFCPRPDFLRETLPYLIDPSIGIVQTQQFFRRREEQTWIEQGAGSSQEPFYRLIQVNFDRFNAAVCVGSCAVYRRAAVEPFGGVAPIEHSEDMYTG 831
            LVLPC PSD EKV+YH SGR  +L+TGF+S+CTLL GM LFT SS +FYWYGAPT F +V++CC+YFGVS+WG+DF+P++H  ++R G   A++ TVDVFLPVCNEP VLLANTWNHVLA+DYPH+ VHVLDDG KDEVKALA +YGF+YIRRDNRPELKKAGNLR+AFARTSGE I IFDADFCPRPDFLRETLPYL+DPSIGI+QT QFFRRREEQTW+EQGAG+SQE FYRLIQVN DRFNAAVCVGSC +YRR AVEPFGGVAPIEHSEDMYTG
Sbjct:  357 LVLPCGPSDEEKVLYHKSGRLTMLSTGFVSFCTLLTGMSLFTMSSPHFYWYGAPTIFVVVHICCHYFGVSIWGRDFDPEIHACVVRHGLDVAFSPTVDVFLPVCNEPAVLLANTWNHVLAMDYPHVTVHVLDDGAKDEVKALAGEYGFQYIRRDNRPELKKAGNLRHAFARTSGEVIVIFDADFCPRPDFLRETLPYLVDPSIGILQTPQFFRRREEQTWVEQGAGASQEHFYRLIQVNLDRFNAAVCVGSCGLYRRTAVEPFGGVAPIEHSEDMYTG 634          
BLAST of mRNA_C-linearis_contig10.549.1 vs. uniprot
Match: D7G9A2_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A2_ECTSI)

HSP 1 Score: 386 bits (991), Expect = 1.250e-122
Identity = 184/279 (65.95%), Postives = 216/279 (77.42%), Query Frame = 1
Query:    1 LVLPCAPSDSEKVMYHASGRWVVLATGFISYCTLLVGMCLFTQSSAYFYWYGAPTAFALVYMCCYYFGVSMWGKDFEPDVHEDILRKGQA-AYTATVDVFLPVCNEPTVLLANTWNHVLALDYPHLIVHVLDDGGKDEVKALAEKYGFEYIRRDNRPELKKAGNLRYAFARTSGEAITIFDADFCPRPDFLRETLPYL-IDPSIGIVQTQQFFRRREEQTWIEQGAGSSQEPFYRLIQVNFDRFNAAVCVGSCAVYRRAAVEPFGGVAPIEHSEDMYTG 831
            LVLPC PSD EK++YH SGR  ++    IS+  L  GM LFT  +  FYW+GAP  F + Y  C+Y G+++WG+DF+P+VH ++LR  Q   Y  +VDVFLPVC EP  LLANTW HV ALDYP   V VLDDG  DEV ALA K+GFEY+ R++ P LKKAGNLR AFARTSGEAI IFDADFCPRPDFL+ET+PY   DP+IGIVQT Q+FR R+EQTWIEQGAG SQE FYR++QVN DRFNAAVCVGSC +YRR A+EP GG+A IEHSEDMYTG
Sbjct:  668 LVLPCPPSDEEKIIYHHSGRLGLITCAMISFAALTWGMWLFTMVTPAFYWFGAPAIFLIFYTACHYLGIAIWGRDFKPEVHTEVLRASQEKGYRPSVDVFLPVCKEPLYLLANTWQHVAALDYPDFKVFVLDDGASDEVAALASKFGFEYVVREDAPALKKAGNLRNAFARTSGEAIAIFDADFCPRPDFLKETVPYFGEDPTIGIVQTPQYFRHRKEQTWIEQGAGVSQEFFYRMVQVNQDRFNAAVCVGSCGLYRRTALEPLGGMAAIEHSEDMYTG 946          
BLAST of mRNA_C-linearis_contig10.549.1 vs. uniprot
Match: A0A6H5K7X7_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X7_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 4.120e-112
Identity = 182/318 (57.23%), Postives = 215/318 (67.61%), Query Frame = 1
Query:    1 LVLPCAPSDSEKVMYHASGRWVVLATGFISYCTLLVGMCLFTQSSAYFYWYGAPTAFALVYMCCYYFGVSMWGKDFEPDVHEDILRKGQA-AYTATVDVFLPVCNEPTVLLANTWNHVLALDYPHLIVHVLDDGGKDEVKALAEKYGFEY---------------------------------------IRRDNRPELKKAGNLRYAFARTSGEAITIFDADFCPRPDFLRETLPYL-IDPSIGIVQTQQFFRRREEQTWIEQGAGSSQEPFYRLIQVNFDRFNAAVCVGSCAVYRRAAVEPFGGVAPIEHSEDMYTG 831
            LVLPC PSD EK++YH SGR  ++    I++  L  GM LFT  +  FYW+GAP  F + Y  C+Y GV++WG+DF+P+VH ++LR  +   Y  +VDVFLPVC EP  LLANTW HV ALDYP   V VLDDG  DEVKALA K+GFE                                        + R++ P LKKAGNLR AFARTSGEAI IFDADFCPR DFL+ET+PY   DP+IGIVQT Q+FR R+EQTWIEQGAG SQE FYR++QVN DRFNAAVCVGSC +YRR A+EP GG+A IEHSEDMYTG
Sbjct:  731 LVLPCPPSDEEKIIYHHSGRLGLIMCAMIAFAALTWGMWLFTMVTPAFYWFGAPAIFLIFYTACHYLGVAIWGRDFKPEVHAEVLRASEEKGYRPSVDVFLPVCKEPLHLLANTWQHVAALDYPDFKVFVLDDGASDEVKALASKFGFESRYVPSPIVTYFVLSRPPYRYCSMLLPDAATHCCRGIAEDVLREDAPALKKAGNLRNAFARTSGEAIAIFDADFCPRADFLKETVPYFGEDPTIGIVQTPQYFRHRKEQTWIEQGAGVSQEFFYRMVQVNQDRFNAAVCVGSCGLYRRTALEPLGGMAAIEHSEDMYTG 1048          
BLAST of mRNA_C-linearis_contig10.549.1 vs. uniprot
Match: D7FP53_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP53_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 4.370e-107
Identity = 170/311 (54.66%), Postives = 215/311 (69.13%), Query Frame = 1
Query:    1 LVLPCAPSDSEKVMYHASGRWVVLATGFISYCTLLVGMCLFTQSSAYFYWYGAPTAFALVYMCCYYFGVSMWGKDFEPDVHEDILRKGQAA-YTATVDVFLPVCNEPTVLLANTWNHVLALDYPHLIVHVLDDGGKDEVKALAEKYGFEY---------------------------------IRRDNRPELKKAGNLRYAFARTSGEAITIFDADFCPRPDFLRETLPYLIDPSIGIVQTQQFFRRREEQTWIEQGAGSSQEPFYRLIQVNFDRFNAAVCVGSCAVYRRAAVEPFGGVAPIEHSEDMYTG 831
            LVLPCAPSD EK +YH +GR  ++  G +S   L  GM LFT ++ +FYW+ APTAF + Y+   YFGV++WGKDF+P+ H   +RK Q   Y  +VD+FLPVC EPT LL NTW +V ALDYP++ VHVLDDG K+EV+ LAE +GF+                                  IRR N PELKKAGNLRYAFARTSGE + IFDADFCPRP+FL+ET PY  D  + I+QT QFFR REEQTW+E+GAG +QE FYR++QVN ++F+A++CVG+C VYRR A+ PFGG A I +SED++TG
Sbjct:  685 LVLPCAPSDEEKEIYHKTGRCFLVTAGVVSVGALSAGMWLFTFAAPFFYWFAAPTAFIMGYLLLSYFGVAVWGKDFDPEDHAARIRKAQHEHYYPSVDIFLPVCREPTHLLDNTWKYVRALDYPNVTVHVLDDGAKEEVRQLAEMHGFQSSPFGATKAHREQPEWLAWWECERVALRRSRFTDIRRTNIPELKKAGNLRYAFARTSGEVLVIFDADFCPRPEFLKETTPYFKDRDVAILQTPQFFRYREEQTWVEKGAGVTQELFYRMVQVNRNKFDASICVGTCGVYRREALAPFGGTAAIGYSEDVHTG 995          
BLAST of mRNA_C-linearis_contig10.549.1 vs. uniprot
Match: A0A6H5KYP8_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP8_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 6.160e-106
Identity = 168/302 (55.63%), Postives = 211/302 (69.87%), Query Frame = 1
Query:    1 LVLPCAPSDSEKVMYHASGRWVVLATGFISYCTLLVGMCLFTQSSAYFYWYGAPTAFALVYMCCYYFGVSMWGKDFEPDVHEDILRKGQAA-YTATVDVFLPVCNEPTVLLANTWNHVLALDYPHLIVHVLDDGGKDEVKALAEKYGFEY------------------------IRRDNRPELKKAGNLRYAFARTSGEAITIFDADFCPRPDFLRETLPYLIDPSIGIVQTQQFFRRREEQTWIEQGAGSSQEPFYRLIQVNFDRFNAAVCVGSCAVYRRAAVEPFGGVAPIEHSEDMYTG 831
            LVLPCAPSD EKV+YH +GR  ++  G +S   L  GM LFT ++ +FYW+ APTAF + Y+   YFGV++WGKDF+P+ H   LRK Q   Y  +VD+FLPVC EPT LL NTW +V ALDYP++ VHVLDDG K+E +A   +   +                         IRR N PELKKAGNLRYAFARTSGE + IFDADFCPRP+FL+ET PY  D  + I+QT QFFR REEQTW+E+GAG +QE FYR++QVN D+F+A++CVG+C VYRR A+ PFGG A I +SED++TG
Sbjct:  630 LVLPCAPSDEEKVIYHKTGRCFLVTAGVVSVGALSAGMWLFTFAAPFFYWFAAPTAFIMGYLLLSYFGVAVWGKDFDPEDHAARLRKAQHEHYYPSVDIFLPVCREPTHLLDNTWKYVRALDYPNVTVHVLDDGAKEERRASERENTCDRAPIVSCKVQTMHASQNTLETETADIRRTNIPELKKAGNLRYAFARTSGEVLVIFDADFCPRPEFLKETTPYFKDRDVAILQTPQFFRYREEQTWVEKGAGVTQELFYRMVQVNRDKFDASICVGTCGVYRREALAPFGGTAAIGYSEDVHTG 931          
BLAST of mRNA_C-linearis_contig10.549.1 vs. uniprot
Match: D7G9A6_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9A6_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 1.060e-101
Identity = 166/278 (59.71%), Postives = 197/278 (70.86%), Query Frame = 1
Query:    4 VLPCAPSDSEKVMYHASGRWVVLATGFISYCTLLVGMCLFTQSSAYFYWYGAPTAFALVYMCCYYFGVSMWGKDFEPDVHEDILRKGQA-AYTATVDVFLPVCNEPTVLLANTWNHVLALDYPHLIVHVLDDGGKDEVKALAEKYGFEYIRRDNRPELKKAGNLRYAFARTSGEAITIFDADFCPRPDFLRETLPYL-IDPSIGIVQTQQFFRRREEQTWIEQGAGSSQEPFYRLIQVNFDRFNAAVCVGSCAVYRRAAVEPFGGVAPIEHSEDMYTG 831
            VLPCAP+D EKV+Y  +GR+ ++    IS+ TL                              + FG++MWG+DF+ D H ++L+  +   Y  +VDVFLPVC EP  LLANTW +V ALDYP   V VLDDG  DEVKALA  +GFEY+ R N PELKKAGNLR AFA TSGEAI IFDADFCPRP+FL+ET+PY   DP+IGIVQT QFFR R+EQTWIEQGAG SQE FYR++Q+N DRFNAAVCVGSC +YRR A+EP GG+A IEHSEDMYTG
Sbjct:  659 VLPCAPTDEEKVIYRNTGRFGIITCAVISFITLT-----------------------------WDFGIAMWGRDFKLDEHAEVLKASEEKGYMPSVDVFLPVCKEPLYLLANTWKYVAALDYPDFKVFVLDDGASDEVKALASVFGFEYVLRSNAPELKKAGNLRNAFAMTSGEAIAIFDADFCPRPEFLKETVPYFGEDPTIGIVQTPQFFRVRDEQTWIEQGAGVSQEFFYRMVQMNQDRFNAAVCVGSCGLYRRTALEPLGGMAAIEHSEDMYTG 907          
BLAST of mRNA_C-linearis_contig10.549.1 vs. uniprot
Match: D7G9A1_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A1_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 1.150e-91
Identity = 141/209 (67.46%), Postives = 169/209 (80.86%), Query Frame = 1
Query:  202 GVSMWGKDFEPDVHEDILRKGQA-AYTATVDVFLPVCNEPTVLLANTWNHVLALDYPHLIVHVLDDGGKDEVKALAEKYGFEYIRRDNRPELKKAGNLRYAFARTSGEAITIFDADFCPRPDFLRETLPYL-IDPSIGIVQTQQFFRRREEQTWIEQGAGSSQEPFYRLIQVNFDRFNAAVCVGSCAVYRRAAVEPFGGVAPIEHSEDM 822
            GV++WGKDF+P+VH ++L+  +   Y  +VDVFLP+C EP  LLANTW +V ALDYP   V VLDDG  +  +ALA  +GFEY+ R + P LKKAGNLR AFARTSGEAI IFDADFCPR DFL+ET+PYL  DP+IGIVQT QFFR R+EQTW+EQGAG +QE FYR++Q+N DRFNAAVCVGSC +YRRAA+EP GG+A IEHSEDM
Sbjct:  454 GVAIWGKDFKPEVHAEVLKASEEKGYRPSVDVFLPMCKEPLRLLANTWKYVAALDYPDFKVFVLDDGASEGAQALASTFGFEYVLRADVPALKKAGNLRNAFARTSGEAIAIFDADFCPRADFLKETVPYLGEDPTIGIVQTPQFFRHRKEQTWVEQGAGVTQEFFYRMVQMNQDRFNAAVCVGSCGLYRRAALEPLGGMAAIEHSEDM 662          
BLAST of mRNA_C-linearis_contig10.549.1 vs. uniprot
Match: A0A8E2E4K1_9PEZI (Glycosyltransferase family 2 protein n=1 Tax=Lepidopterella palustris CBS 459.81 TaxID=1314670 RepID=A0A8E2E4K1_9PEZI)

HSP 1 Score: 283 bits (723), Expect = 7.440e-89
Identity = 146/282 (51.77%), Postives = 189/282 (67.02%), Query Frame = 1
Query:    1 LVLPCAPSDSEKVMYHASGRWVVLATGFISYCTLLVGMCLFTQSSAYFYWYGAPTAFALVYMCCYYFGVSMWGKDFEPDVHEDILRKGQA--AYTATVDVFLPVCNEPTVLLANTWNHVLALDYP--HLIVHVLDDGGKDEVKALAEKYGFEYIRRDNRPELKKAGNLRYAFARTSGEAITIFDADFCPRPDFLRETLP-YLIDPSIGIVQTQQFFRRREEQTWIEQGAGSSQEPFYRLIQVNFDRFNAAVCVGSCAVYRRAAVEPFGGVAPIEHSEDMYTG 831
            ++LP  P+D EK  Y  + R  +   G  ++ +L  GM LFT  +  F W+G        Y+   YF V + GKD++ D H+ +L+      A   TVD+FLP C EP V+L NT+ HV ALDYP   L VHV+DDG +  VK LAE+YGF Y  RD+RP LKKAGNLR+ FARTS E   I+DADFCPRPDFL E +P +L DP   I+QT QFFR  ++QTW+EQGAG++QE FYR++QVN +R+ A++CVGS AVYRRAA+E  GG A I  SED++TG
Sbjct:   33 IILPVCPTDEEKYCYLRTNRIPLYVLGIFAFLSLSAGMWLFTVCAYIFAWFGLFVVLLQFYLMVSYF-VGVVGKDYDYDSHKQVLQSHAVTPANAPTVDIFLPCCMEPLVILENTYKHVRALDYPTGKLQVHVMDDGNQASVKELAERYGFNYSVRDDRPRLKKAGNLRWHFARTSAEFFVIYDADFCPRPDFLHELIPEHLADPKTAIIQTPQFFRVSDDQTWVEQGAGATQELFYRVVQVNRNRWGASICVGSNAVYRRAALEEVGGTAEIGFSEDVHTG 313          
BLAST of mRNA_C-linearis_contig10.549.1 vs. uniprot
Match: A0A5C3MII2_9AGAR (Nucleotide-diphospho-sugar transferase n=1 Tax=Crucibulum laeve TaxID=68775 RepID=A0A5C3MII2_9AGAR)

HSP 1 Score: 283 bits (723), Expect = 7.640e-89
Identity = 147/281 (52.31%), Postives = 190/281 (67.62%), Query Frame = 1
Query:    1 LVLPCAPSDSEKVMYHASGRWVVLATGFISYCTLLVGMCLFTQSSAYFYWYGAPTAFALVYMCCYYFGVSMWGKDFEPDVHEDILRKGQAAYT---ATVDVFLPVCNEPTVLLANTWNHVLALDYPHLIVHVLDDGGKDEVKALAEKYGFEYIRRDNRPELKKAGNLRYAFARTSGEAITIFDADFCPRPDFLRETLPYLID-PSIGIVQTQQFFRRREEQTWIEQGAGSSQEPFYRLIQVNFDRFNAAVCVGSCAVYRRAAVEPFGGVAPIEHSEDMYTG 831
            LVLP  P+D+EK +Y  + R  +   G  S+ ++ VGM  F  S++ FYW+G       VY+   Y  V   GKDF+ + H  ++   + +YT    +VD++LP C EP  +L NT+ +V  L+YP+  V VLDDGG D VK LAE+YGF YI RDN+P LKKAGNLRYAFART G+  TIFDADFCPR DFL   LPY+     + IVQ+ QFFR  +EQTW+EQGA S+QE FYR++QVN DR+ A++CVGS AVYRRAA+   GG A I HSED++TG
Sbjct:   30 LVLPSPPTDAEKFLYAKTRRLPLYLFGTFSFLSVSVGMWFFAISTSMFYWFGVFVGLIQVYLIISYI-VGYCGKDFDTEAHAKLME--EHSYTDNFPSVDIYLPCCKEPLDILENTYIYVAKLEYPNYKVFVLDDGGMDSVKHLAERYGFNYICRDNKPHLKKAGNLRYAFARTEGDFFTIFDADFCPRADFLNTILPYMKKYEDVAIVQSPQFFRPCKEQTWVEQGASSTQELFYRVVQVNRDRWGASICVGSNAVYRRAALAEVGGTAEIGHSEDVHTG 307          
BLAST of mRNA_C-linearis_contig10.549.1 vs. uniprot
Match: R8BL78_PHAM7 (Putative cellulose synthase catalytic subunit protein n=1 Tax=Phaeoacremonium minimum (strain UCR-PA7) TaxID=1286976 RepID=R8BL78_PHAM7)

HSP 1 Score: 279 bits (713), Expect = 8.190e-89
Identity = 145/282 (51.42%), Postives = 189/282 (67.02%), Query Frame = 1
Query:    1 LVLPCAPSDSEKVMYHASGRWVVLATGFISYCTLLVGMCLFTQSSAYFYWYGAPTAFALVYMCCYYFGVSMWGKDFEPDVHEDILRKGQAAYTA--TVDVFLPVCNEPTVLLANTWNHVLALDYP--HLIVHVLDDGGKDEVKALAEKYGFEYIRRDNRPELKKAGNLRYAFARTSGEAITIFDADFCPRPDFLRETLP-YLIDPSIGIVQTQQFFRRREEQTWIEQGAGSSQEPFYRLIQVNFDRFNAAVCVGSCAVYRRAAVEPFGGVAPIEHSEDMYTG 831
            LVLP  P+D EK+ Y  + R  +   G  S+ +L  GM LF   S  F WY     F  +Y+   YF V + GKD++   H++ +        +  TVD++LPVC EP  +L NTWNH+  L +P   + VHVLDDG ++ V+ LA++YGF YI R++RP LKKAGNLR+AFARTSG+   IFDADFCPRPDFL E LP +L D    IVQT QFFR   +QTW+EQGAG++QE FYR++QVN +R+ A++CVGS AVYRRAA+E  GG A I  SED++TG
Sbjct:  136 LVLPTCPTDEEKLSYLHTNRVPLYIFGLFSFLSLSAGMWLFALCSIIFVWYSVFVGFVDIYLIISYF-VGLVGKDWDYAAHQEAVANNPVIPESAPTVDIYLPVCAEPIEILENTWNHIERLQWPAGKIEVHVLDDGAQEIVRDLAQRYGFNYIVREDRPRLKKAGNLRWAFARTSGDFFAIFDADFCPRPDFLMEILPEHLADDKTAIVQTPQFFRITNDQTWVEQGAGATQELFYRVVQVNRNRWGASICVGSNAVYRRAALEEVGGTAEIGFSEDVHTG 416          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQH7_ECTSI3.480e-16279.14Cellulose synthase (UDP-forming), family GT2 n=2 T... [more]
D7G9A2_ECTSI1.250e-12265.95Cellulose synthase (UDP-forming), family GT2 n=1 T... [more]
A0A6H5K7X7_9PHAE4.120e-11257.23GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FP53_ECTSI4.370e-10754.66Cellulose synthase (UDP-forming), family GT2 n=1 T... [more]
A0A6H5KYP8_9PHAE6.160e-10655.63GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G9A6_ECTSI1.060e-10159.71Cellulose synthase (UDP-forming), family GT2 n=2 T... [more]
D7G9A1_ECTSI1.150e-9167.46Cellulose synthase (UDP-forming), family GT2 n=1 T... [more]
A0A8E2E4K1_9PEZI7.440e-8951.77Glycosyltransferase family 2 protein n=1 Tax=Lepid... [more]
A0A5C3MII2_9AGAR7.640e-8952.31Nucleotide-diphospho-sugar transferase n=1 Tax=Cru... [more]
R8BL78_PHAM78.190e-8951.42Putative cellulose synthase catalytic subunit prot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2244165..2246771 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score479.6
Seed ortholog evalue1e-132
Seed eggNOG ortholog2880.D7FQH7
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.Glycosyl transferase family 21
EggNOG OGs2C0MJ@1,2S2MV@2759
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size831
Cds size831
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.549.1prot_C-linearis_contig10.549.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig10 2244165..2246771 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927340.4197414-CDS-C-linearis_contig10:2244164..22442871622927340.4197414-CDS-C-linearis_contig10:2244164..2244287Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2244165..2244287 -
1690879637.5807889-CDS-C-linearis_contig10:2244164..22442871690879637.5807889-CDS-C-linearis_contig10:2244164..2244287Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2244165..2244287 -
1622927340.4306173-CDS-C-linearis_contig10:2245040..22453031622927340.4306173-CDS-C-linearis_contig10:2245040..2245303Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2245041..2245303 -
1690879637.591164-CDS-C-linearis_contig10:2245040..22453031690879637.591164-CDS-C-linearis_contig10:2245040..2245303Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2245041..2245303 -
1622927340.440701-CDS-C-linearis_contig10:2245654..22459031622927340.440701-CDS-C-linearis_contig10:2245654..2245903Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2245655..2245903 -
1690879637.6022413-CDS-C-linearis_contig10:2245654..22459031690879637.6022413-CDS-C-linearis_contig10:2245654..2245903Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2245655..2245903 -
1622927340.4547563-CDS-C-linearis_contig10:2246319..22464791622927340.4547563-CDS-C-linearis_contig10:2246319..2246479Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2246320..2246479 -
1690879637.6112206-CDS-C-linearis_contig10:2246319..22464791690879637.6112206-CDS-C-linearis_contig10:2246319..2246479Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2246320..2246479 -
1622927340.4658015-CDS-C-linearis_contig10:2246735..22467711622927340.4658015-CDS-C-linearis_contig10:2246735..2246771Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2246736..2246771 -
1690879637.6215587-CDS-C-linearis_contig10:2246735..22467711690879637.6215587-CDS-C-linearis_contig10:2246735..2246771Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2246736..2246771 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.549.1

>prot_C-linearis_contig10.549.1 ID=prot_C-linearis_contig10.549.1|Name=mRNA_C-linearis_contig10.549.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=277bp
LVLPCAPSDSEKVMYHASGRWVVLATGFISYCTLLVGMCLFTQSSAYFYW
YGAPTAFALVYMCCYYFGVSMWGKDFEPDVHEDILRKGQAAYTATVDVFL
PVCNEPTVLLANTWNHVLALDYPHLIVHVLDDGGKDEVKALAEKYGFEYI
RRDNRPELKKAGNLRYAFARTSGEAITIFDADFCPRPDFLRETLPYLIDP
SIGIVQTQQFFRRREEQTWIEQGAGSSQEPFYRLIQVNFDRFNAAVCVGS
CAVYRRAAVEPFGGVAPIEHSEDMYTG
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mRNA from alignment at C-linearis_contig10:2244165..2246771-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.549.1 ID=mRNA_C-linearis_contig10.549.1|Name=mRNA_C-linearis_contig10.549.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2607bp|location=Sequence derived from alignment at C-linearis_contig10:2244165..2246771- (Chordaria linearis ClinC8C monoicous)
TTGGTGTTGCCGTGCGCCCCTTCGGACAGCGAAAAGGTGCGTGTTGAGAA CTATGTGTAGTGTGTACGGACCGAAAGGTGGTACAGCAACGCATAGGTTC AGACGTGTATCCGAAGCGCTGCAAGGCAGTCATTTGACCGACGCTTTTCA TGGCGTCTAGATCACCTCCCTACAATTCAGTCTGATACGGAGATGGTGTG ATGGCATATCACCTGCTCTTGGGATCAACAACAAAAAATATTGTCTGACA ATCACCCCTCCGGACTGTTTTTTCGTCGAAACATTGGTGCAGGTCATGTA CCACGCGTCTGGGCGCTGGGTGGTGCTGGCGACCGGGTTTATCAGCTACT GTACCCTACTGGTGGGGATGTGCCTCTTTACACAAAGCTCGGCATATTTC TACTGGTATGGTGCGCCTACCGCGTTCGCCCTCGTTTATATGTGCTGCTA CTGTGAGTGCAAAATCATGTCGATAGCCCCCCCCTCGCGAAAGGTAGCAA GAATGGCAAGGCGCAGGCCGTCGCATATCATAAAAGGCTCTGAGATACTG TCAGTGCATGCATTGGACTGAACAATCCCCGAGAAAATAATGGGTGGGAA CGCTCGATGGTGTTGTTTCCCCACAGCTCCGGATTGCGCAGCGCAAGGGG ACCACGCTGCGAATTTAGACTTGTTTGCAGGCAGCGTTAAGTTAGGCTGC ACGAGACCTAACAAACACTGTTGTTGACCTTCTCACGCAATTTTGACGCC AGCATCAGAGACAGGGCGGCGCAGGACCCGGCACAGCCACTGTTGAATTT TGAGTGCACGCTCTTCCTTGACGCTCCCGCTCTCTCGTTCAACTCTTGCG ACGACATGACTGTTCCAGATTTTGGTGTTTCGATGTGGGGCAAAGACTTC GAACCAGACGTGCACGAGGACATCCTCCGAAAAGGGCAAGCCGCCTACAC CGCTACGGTCGACGTTTTCCTGCCGGTGTGCAACGAGCCCACTGTGCTGC TGGCCAACACCTGGAACCACGTGCTAGCGTTGGACTACCCCCACCTTATC GTCCACGTCTTGGACGACGGTGGCAAGGACGAGGTCAAGGCGCTTGCGGA AAAATACGGCTTTGAATGTGAGCAAAGCATCACGTGAACGACAAGGATTA TCGTGTAGTAGGCAGTGCGCTGCGGGAGTTGATTGTGTATGAGGCATGAC GAGGAGCAGGAACAAGCACGCCCCGAAGTCGTATTCGCACGGGTCGTGTA GGGGGCAAACTCGTTTCACCCTCCAGCAGAACGATCTCTGGCAGCAGTAG GCCGCTGGACGGCTTCGTCCTTGCAAGAGCGTCCCGAGAAGTCTTTCGTT GTTGTGGTATTTGTTGTTGTTGTCGTCATCTGTCTCACTTGAAGCAAACA CAACTCTGATGTGGCTAATTGTTTACCGCGCCTGTTTTGAACCCCATGTA CCTATACATATACCACAGACATTCGACGGGACAACCGCCCGGAGCTCAAG AAAGCGGGAAATCTCCGCTACGCCTTCGCCCGAACGTCGGGAGAAGCCAT CACCATCTTCGACGCCGACTTTTGCCCGAGACCCGACTTCCTGCGGGAGA CTCTCCCCTACCTGATAGACCCGTCTATCGGCATTGTCCAGACGCAGCAG TTCTTCAGGAGACGGGAGGAGCAGACCTGGATTGAACAGGGGGCCGGGTC GAGCCAGGAGCCGTTCTATCGGCTGATTCAGGTGAGCGGGAATTTTCGCG GGCATAGAGGGAAGAGATTGCCGCGCTCTTCTCGCATTGAAAATCAAAGG CGAAGCACCGCAGGAGGAGAGGGTGGGGGGCCTCAGGGAGAGGAACCCTT CTGTGTGACCACGGGCTAGAGCTCCCTTCCGGCAGAAATACTGTGAGCTC TGGTTATATGTGAAGATGAAAACACAAATGGGCGGCCCGGCCCCTCTAAG GCCTCAGAACAGGATTCGTTGGGCTGGGTCCGTGTGGGGTCGTACATACA TACGTACCCGGGCCCGAGGTTGCTCCCACGCTTCACGGTGTCGGGCGATG CCGGCAGTAAGGGGTGCAGGCGGGGGTCTCAGTAGAGCGAAATATAGCTG TTCGCGAGGTGTCTTCCCTGCGCTCAGAGCTTCGAACCGAAATACTTAGC TCGGTCAAGACGAAGAAAGTCCGATATGCATACGACCACCGGTCAGTCCG ACCCCTCCGGCTGGCTCAATGTGAGCCAACCTCTGGATGCAATAATATTA CCCTCGTTTCGAAGTAGGCCTGCAGCTCCTACGCACTACGCCAGATCTGA ACGTTTTCATGTAGCGCACCCAACAATGTACCCCGGGCGTGGGTCTTGAC TGCTTCGCACCGTTGTGGATTCGAGAGTTGGCCTGAGCAATTACAAAAAC GAGAAGGGAATTACAAAAACTGAGCACTGACCGCCGCGTACTGTATTTTT CTCCGTCCTGTTCCGCGTGGCGTTCGCGTTGTAGGTAAACTTTGACCGCT TCAACGCGGCGGTCTGCGTGGGGTCCTGTGCCGTGTACCGACGGGCGGCG GTGGAGCCGTTCGGCGGGGTGGCGCCGATCGAGCACTCGGAGGACATGTA CACCGGC
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Coding sequence (CDS) from alignment at C-linearis_contig10:2244165..2246771-

>mRNA_C-linearis_contig10.549.1 ID=mRNA_C-linearis_contig10.549.1|Name=mRNA_C-linearis_contig10.549.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at C-linearis_contig10:2244165..2246771- (Chordaria linearis ClinC8C monoicous)
TTGGTGTTGCCGTGCGCCCCTTCGGACAGCGAAAAGTTGGTGTTGCCGTG
CGCCCCTTCGGACAGCGAAAAGGTCATGTACCACGCGTCTGGGCGCTGGG
TGGTGCTGGCGACCGGGTTTATCAGCTACTGTACCCTACTGGTGGGGATG
TGCCTCTTTACACAAAGCTCGGCATATTTCTACTGGTATGGTGCGCCTAC
CGCGTTCGCCCTCGTTTATATGTGCTGCTACTGTCATGTACCACGCGTCT
GGGCGCTGGGTGGTGCTGGCGACCGGGTTTATCAGCTACTGTACCCTACT
GGTGGGGATGTGCCTCTTTACACAAAGCTCGGCATATTTCTACTGGTATG
GTGCGCCTACCGCGTTCGCCCTCGTTTATATGTGCTGCTACTATTTTGGT
GTTTCGATGTGGGGCAAAGACTTCGAACCAGACGTGCACGAGGACATCCT
CCGAAAAGGGCAAGCCGCCTACACCGCTACGGTCGACGTTTTCCTGCCGG
TGTGCAACGAGCCCACTGTGCTGCTGGCCAACACCTGGAACCACGTGCTA
GCGTTGGACTACCCCCACCTTATCGTCCACGTCTTGGACGACGGTGGCAA
GGACGAGGTCAAGGCGCTTGCGGAAAAATACGGCTTTGAATATTTTGGTG
TTTCGATGTGGGGCAAAGACTTCGAACCAGACGTGCACGAGGACATCCTC
CGAAAAGGGCAAGCCGCCTACACCGCTACGGTCGACGTTTTCCTGCCGGT
GTGCAACGAGCCCACTGTGCTGCTGGCCAACACCTGGAACCACGTGCTAG
CGTTGGACTACCCCCACCTTATCGTCCACGTCTTGGACGACGGTGGCAAG
GACGAGGTCAAGGCGCTTGCGGAAAAATACGGCTTTGAATACATTCGACG
GGACAACCGCCCGGAGCTCAAGAAAGCGGGAAATCTCCGCTACGCCTTCG
CCCGAACGTCGGGAGAAGCCATCACCATCTTCGACGCCGACTTTTGCCCG
AGACCCGACTTCCTGCGGGAGACTCTCCCCTACCTGATAGACCCGTCTAT
CGGCATTGTCCAGACGCAGCAGTTCTTCAGGAGACGGGAGGAGCAGACCT
GGATTGAACAGGGGGCCGGGTCGAGCCAGGAGCCGTTCTATCGGCTGATT
CAGACATTCGACGGGACAACCGCCCGGAGCTCAAGAAAGCGGGAAATCTC
CGCTACGCCTTCGCCCGAACGTCGGGAGAAGCCATCACCATCTTCGACGC
CGACTTTTGCCCGAGACCCGACTTCCTGCGGGAGACTCTCCCCTACCTGA
TAGACCCGTCTATCGGCATTGTCCAGACGCAGCAGTTCTTCAGGAGACGG
GAGGAGCAGACCTGGATTGAACAGGGGGCCGGGTCGAGCCAGGAGCCGTT
CTATCGGCTGATTCAGGTAAACTTTGACCGCTTCAACGCGGCGGTCTGCG
TGGGGTCCTGTGCCGTGTACCGACGGGCGGCGGTGGAGCCGTTCGGCGGG
GTGGCGCCGATCGAGCACTCGGAGGACATGTACACCGGCGTAAACTTTGA
CCGCTTCAACGCGGCGGTCTGCGTGGGGTCCTGTGCCGTGTACCGACGGG
CGGCGGTGGAGCCGTTCGGCGGGGTGGCGCCGATCGAGCACTCGGAGGAC
ATGTACACCGGC
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