mRNA_C-linearis_contig10.544.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.544.1 vs. uniprot
Match: A0A6H5JFU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU1_9PHAE) HSP 1 Score: 608 bits (1568), Expect = 2.830e-201 Identity = 345/571 (60.42%), Postives = 409/571 (71.63%), Query Frame = 1 Query: 301 AASAGDSHSCVVLDGGLVKCWGEAIKGQLGHEDGIARGANVTDLLGDTLPAVPLGDGFEVAAVYSGNEFSCAISVE-KAVKCWGINQAGQLGQGDTEQRGGPNGGVFEMGVNLPPVDVVGVNGSAAGLEVESIALGGSSACAVISGGLLKCWGLGEGGQLGLGDTDNRGDQPNEMGDNLPTVDLGSGSVVTSVALGARHACAVIGEGQVKCWGNNDGGQLGYEDRYPRGSGA-------LGNALPFVDLGTGQQVTAVAAGFFHTCALLYSGDVKCWGFGSSGQLGQGNNSSVGDVAGTMGDNLAPIDLGTGRTAVAVSLGGTHTCAVLDDGTVKCFGGNLFGSLGQGDLIPRGVAPGEMGDNLPALPLSFGEGEGLVSNVFAGTFHTCVTGAEGGLACFGYNHQGQLGASQPEDLGDDPGEVEGLTSVDLGDGVTVLA---------------SPTASSRRNINSDSDDGVSTPVIAAAVSGGLLAFCLFLGVACXXXXXXXXXXXXXXXXXXXAAGVGAISSME-----GGAAGSTKPRLENGKRVQFSGDVNPDAVDAHPLLNGVNLD 1929
A SAG SHSC VL VKC+G+ + GQLG D ++RG N TD+ GD LP VPLG F+ AAVYSGNEF+CA+SV+ +VKCWG N GQLG GDTE RGG N VFEMG NLP VD G +G L VES++LGGS+ACA+++GG ++CWG E GQLGLGDT+NRGD+P+EMGD+LP VDLG+G+VV+SVA+GA+HACA + +G VKCWGNNDGGQLGYEDR PRG+G +G+AL VDLG GQ+ AV AGFFHTCALLY GD+KCWGFGSSGQLGQG+N+S+GD TMGDNLAPIDLGTGRTAVAV+LGGTHTCAVLD+ T+KC+G N GSLG GD IPRG PGEMGDNL ++PL+FG+GEG SNVFAG+FH+CVTG+EGGLACFGYN GQLGA E +GD+PGEVE L SVDLG+ TV+A SPT D +DGVS+ XXXXXXXXXXXXXXXXXXX G + + +++NGKRVQF+ +VNP+ VD HPLL GV LD
Sbjct: 25 AVSAGSSHSCAVLSDATVKCFGDNLLGQLGQLDSLSRGLNATDM-GDNLPTVPLGT-FQAAAVYSGNEFNCAVSVDGDSVKCWGQNDGGQLGLGDTEARGGLNDEVFEMGENLPTVDFSGNSG----LSVESMSLGGSAACALLTGGSVRCWGANEAGQLGLGDTENRGDEPDEMGDDLPFVDLGTGAVVSSVAVGAKHACATMEDGVVKCWGNNDGGQLGYEDRLPRGTGVEIDGVGGMGDALAAVDLGLGQRAIAVEAGFFHTCALLYEGDIKCWGFGSSGQLGQGSNASIGDALNTMGDNLAPIDLGTGRTAVAVALGGTHTCAVLDNETLKCWGSNSLGSLGLGDAIPRGTGPGEMGDNLESVPLTFGDGEGAASNVFAGSFHSCVTGSEGGLACFGYNILGQLGAGTSETIGDEPGEVEALASVDLGERATVVAPVSPWSIFNASRTVSSPTTQIGNVGGGDGNDGVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADSAAKATKVDNGKRVQFNSNVNPEVVDIHPLLRGVCLD 589
BLAST of mRNA_C-linearis_contig10.544.1 vs. uniprot
Match: D7FP43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP43_ECTSI) HSP 1 Score: 547 bits (1410), Expect = 8.570e-181 Identity = 284/437 (64.99%), Postives = 335/437 (76.66%), Query Frame = 1 Query: 286 PGVARAASAGDSHSCVVLDGGLVKCWGEAIKGQLGHEDGIARGANVTDLLGDTLPAVPLGDGFEVAAVYSGNEFSCAISVEKAVKCWGINQAGQLGQGDTEQRGGPNGGVFEMGVNLPPVDVVGVNGSAAGLEVESIALGGSSACAVISGGLLKCWGLGEGGQLGLGDTDNRGDQPNEMGDNLPTVDLGSGSVVTSVALGARHACAVIGEGQVKCWGNNDGGQLGYEDRYPRGS--GALGNALPFVDLGTGQQVTAVAAGFFHTCALLYSGDVKCWGFGSSGQLGQGNNSSVGDVAGTMGDNLAPIDLGTGRTAVAVSLGGTHTCAVLDDGTVKCFGGNLFGSLGQGDLIPRGVAPGEMGDNLPALPLSFGEGEGLVSNVFAGTFHTCVTGAEGGLACFGYNHQGQLGASQPE-DLGDDPGEVEGLTSVDLGDGVTV 1587
PG ARAASAG SHSCVVL GG +KCWGE GQ+G D + RG + +D+ GD+LP VPLG+ FE + V SG+EFSCA++V+ AVKCWG N +GQLG GD E RGG + FEMG NLP +D+ G+ VESIAL GS ACAV++ G LKCWG EGGQLGLGDT RG+ +MGDNLP VDLG +V+SVALGARH CAV+G+G VKCWGNNDGGQLGYED RG G +G+ LP VDLGT Q+ AVAAGFFHTCALLY+GD+KCWGFGS+GQLGQG+N+S+G+ +MGDN P+DLG RTA+AVSLGGTH+CA LDD TVKC+GGN GSLG GD + RG+ PGEMGDNLP + LSFG G G SNVFAG FHTCV+GAEGGLACFG N GQLG+ E ++GD+PGEV+ LTS+DLG G V
Sbjct: 15 PG-ARAASAGASHSCVVLVGGKIKCWGENYWGQVGQNDNLVRGDDASDM-GDSLPYVPLGE-FEASLVASGSEFSCALAVDGAVKCWGRNSSGQLGLGDNETRGGQD-DAFEMGDNLPVLDL------GTGVAVESIALAGSHACAVLADGNLKCWGENEGGQLGLGDTLTRGNAMGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAVGQMGDLLPAVDLGTKQRAIAVAAGFFHTCALLYTGDIKCWGFGSNGQLGQGSNASIGNAVDSMGDNFGPVDLGADRTAIAVSLGGTHSCAALDDSTVKCWGGNSVGSLGLGDSLNRGLGPGEMGDNLPTVGLSFGPGLGAASNVFAGRFHTCVSGAEGGLACFGLNAGGQLGSGSDETNIGDEPGEVKELTSIDLGAGEVV 441
BLAST of mRNA_C-linearis_contig10.544.1 vs. uniprot
Match: A0A6H5KP75_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP75_9PHAE) HSP 1 Score: 539 bits (1388), Expect = 4.300e-167 Identity = 291/469 (62.05%), Postives = 340/469 (72.49%), Query Frame = 1 Query: 208 QQRSRRSMMESVAVAIAVVVCGVVLLPGVARAASAGDSHSCVVLDGGLVKCWGEAIKGQLGHEDGIARGANVTDLLGDTLPAVPLGDGFEVAAVYSGNEFSCAISVEKAVKCWGINQAGQLGQGDTEQRGGPNGGVFEMGVNLPPVDVVGVNGSAAGLEVESIALGGSSACAVISGGLLKCWGLGEGGQLGLGDTDNRGDQPNEMGDNLPTVDLGSGSVVTSVALGARHACAVIGEGQVKCWGNNDGGQLGYEDRYPRGS--GALGNALPFVDLGTGQQVTAVAAGFFHTCALLYSGDVKCWGFGSSGQLGQGNNSSVGDVAGTMGDNLAPIDLGTGRTAVAVSLGGTHTCAVLDDGTVKCFGGNLFGSLGQGDLIPRGVAPGEMGDNLPALPLSFGEGEGLVSNVFAGTFHTCVTGAEGGLACFGYNHQGQLGASQPE-DLGDDPGEVEGLTSVDLG--DGVTVLASP 1599
Q+ R M V VA+ V + P ARAASAG SHSC VL GG +KCWGE GQ+G D + RG N +D+ GD LP V LG FE V SG+EF+CA SV+ VKCWG N AGQLG GD E RGG N VFEMG +LP VD+ G+ VESI L GS ACAV GL+KCWG EGGQLGLGD RG+ +MGD+LP VDLG+G + +SVALGARH CAV+ +G VKCWGNNDGGQLGYED RG+ G +G++LPFVDLG Q+ +VAAGFFHTCALLY+GD+KCWGFGS+GQLGQG N S+G AGTMGDNL PIDLGTG TA+A+SLGGTH+CAVLDD TVKC+GGN G+LG GD++ RG PGEMGDNLPA+ L FG G G VSNVFAG FHTCV+G EGGL CFG N GQLGA E ++GD+PGEV L+SV LG + V+A+P
Sbjct: 70 QEGRRHHGMAKVGVALGVALAAGCCAPA-ARAASAGASHSCTVLVGGTIKCWGENFWGQVGQNDNLVRGKNASDM-GDDLPYVQLGI-FEADMVASGSEFNCARSVDGEVKCWGRNTAGQLGLGDNETRGGVN-DVFEMGNDLPVVDL------GTGVTVESIGLAGSHACAVTLIGLVKCWGENEGGQLGLGDKLARGNLTGQMGDDLPYVDLGTGVLASSVALGARHTCAVVDDGGVKCWGNNDGGQLGYEDTAARGTAAGEMGDSLPFVDLGRDQKAVSVAAGFFHTCALLYTGDIKCWGFGSNGQLGQGTNESIGTSAGTMGDNLPPIDLGTGSTAIAMSLGGTHSCAVLDDYTVKCWGGNSVGTLGLGDVLNRGAEPGEMGDNLPAVDLDFGTGTGAVSNVFAGRFHTCVSGTEGGLVCFGLNSGGQLGAGTDETNIGDEPGEVAALSSVSLGTDEVAAVIAAP 528
BLAST of mRNA_C-linearis_contig10.544.1 vs. uniprot
Match: D7FQH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH4_ECTSI) HSP 1 Score: 441 bits (1133), Expect = 1.980e-141 Identity = 225/329 (68.39%), Postives = 262/329 (79.64%), Query Frame = 1 Query: 295 ARAASAGDSHSCVVLDGGLVKCWGEAIKGQLGHEDGIARGANVTDLLGDTLPAVPLGDGFEVAAVYSGNEFSCAISVEK-AVKCWGINQAGQLGQGDTEQRGGPNGGVFEMGVNLPPVDVVGVNGSAAGLEVESIALGGSSACAVISGGLLKCWGLGEGGQLGLGDTDNRGDQPNEMGDNLPTVDLGSGSVVTSVALGARHACAVIGEGQVKCWGNNDGGQLGYEDRYPRGSGA-------LGNALPFVDLGTGQQVTAVAAGFFHTCALLYSGDVKCWGFGSSGQLGQGNNSSVGDVAGTMGDNLAPIDLGTGRTAVAVSLGGTHTCA 1257
A A SAG SHSC VL VKC+G+ GQLG D ++RG TD+ GD LP VPLG FE AAVYSGNEF+CA+SV+ +VKCWG N+ GQLG GDTE RGGPN +FEMG NLP VD G +G L VES++LGGS+ACAV++GG ++CWG E GQLGLGDT+NRGD+P+EMGD+LP VDLG+GSVV+SVA+GA+HACA + +G VKCWGNNDGGQLGYEDR PRG+G +G+AL VDLG GQ+ AV AGFFHTCALLY GDVKCWGFGSSGQLGQG+N+S+GDV TMGDNLAPIDLGTGRTAVAV+LGGTHTCA
Sbjct: 25 ATAVSAGSSHSCAVLSDATVKCFGDNTLGQLGQLDSLSRGLEATDM-GDNLPTVPLGT-FEAAAVYSGNEFNCAVSVDGGSVKCWGQNEGGQLGLGDTEARGGPNDDIFEMGENLPTVDFSGNSG----LSVESMSLGGSAACAVLTGGSVRCWGANEVGQLGLGDTENRGDEPDEMGDDLPFVDLGTGSVVSSVAVGAKHACATMEDGTVKCWGNNDGGQLGYEDRLPRGTGVEIDGRGGMGDALAAVDLGLGQRAIAVEAGFFHTCALLYEGDVKCWGFGSSGQLGQGSNASIGDVLNTMGDNLAPIDLGTGRTAVAVALGGTHTCA 347
BLAST of mRNA_C-linearis_contig10.544.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO) HSP 1 Score: 368 bits (944), Expect = 2.850e-112 Identity = 205/432 (47.45%), Postives = 259/432 (59.95%), Query Frame = 1 Query: 301 AASAGDSHSCVVLDGGLVKCWGEAIKGQLGHEDGIARGANVTDLLGDTLPAVPLGDGFEVAAVYSGNEFSCAISVEKAVKCWGINQAGQLGQGDTEQRG-GPNGGVFEMGVNLPPVDVVGVNGSAAGLEVESIALGGSSACAVISGGLLKCWGLGEGGQLGLGDTDNRGDQPNEMGDNLPTVDLGSGSVVTSVALGARHACAVIGEGQVKCWGNNDGGQLGYEDRYPRGSGA--LGNALPFVDLGTGQQVTAVAAGFFHTCALLYSGDVKCWGFGSSGQLGQGNNSSVGDVAGTMGDNLAPIDLGTGRTAVAVSLGGTHTCAVLDDGTVKCFGGNLFGSLGQGDLIPRGVAPGEMGDNLPALPLSFGEGEGLVSNVFAGTFHTCVTGAEGGLACFGYNHQGQLGASQPEDLGDDPGEV-EGLTSVDLGDGVT 1584
A S G H+CV+LD G +KCWG GQLG D RG + ++ G+ LPAV LG G A+ +G +CA+ ++KCWG N AGQLG GDT RG GP EMG LP + + G +I++GG CA++ G +KCWG GQLGLGDT +RGD P EMGD LP + LG+G ++++G H CA++ G +KCWG N GQLG D RG G +G+ LP + LGTG+ A++AG +HTCALL +G VKCWG +GQLG G+ S D G MGD L + LGTGRTA A+S G HTCA+LD+G VKC+G N G LG GD RG PGEMGD LPA+ L G +FAG +HTC G + C+GYN GQLG D GD PGE+ + L +V LG G T
Sbjct: 46 AISVGQLHTCVLLDNGYIKCWGANGAGQLGLGDTSYRGDDRGEM-GNRLPAVALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLGDTSSRGDGPG----EMGDTLPAITL------GTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVKCWGANGNGQLGLGDTSYRSDGPGEMGDTLPAVVLGTGRTATAISAGYYHTCALLDNGYVKCWGYNSDGQLGLGDTSYRGNGPGEMGDTLPAITLGTGR---TAMAIFAGGYHTCALLDNGSVKCWGYNGNGQLGLGNTSDRGDGPGEMGDMLPAVSLGMGRT 463
BLAST of mRNA_C-linearis_contig10.544.1 vs. uniprot
Match: A0A0K1EHP4_CHOCO (Uncharacterized protein n=2 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EHP4_CHOCO) HSP 1 Score: 356 bits (913), Expect = 4.900e-106 Identity = 200/416 (48.08%), Postives = 252/416 (60.58%), Query Frame = 1 Query: 313 GDSHSCVVLDGGLVKCWGEAIKGQLGHEDGIARGANVTDLLGDTLPAVPLGDGFEVAAVYSGNEFSCAISVEKAVKCWGINQAGQLGQGDTEQRG-GPNGGVFEMGVNLPPVDVVGVNGSAAGLEVESIALGGSS--ACAVISGGLLKCWGLGEGGQLGLGDTDNRGDQPNEMGDNLPTVDLGSGSVVTSVALGARHACAVIGEGQVKCWGNNDGGQLGYEDRYPRGSGA--LGNALPFVDLGTGQQVTAVAAGFFHTCALLYSGDVKCWGFGSSGQLGQGNNSSVGDVAGTMGDNLAPIDLGTGRTAVAVSLGGTHTCAVLDDGTVKCFGGNLFGSLGQGDLIPRGVAPGEMGDNLPALPLSFGEGEGLVSNVFAGTFHTCVTGAEGGLACFGYNHQGQLGASQPEDLGDDPGEV 1545
G H+C +L G VKCWG ++GQLG D RG + D +GD LPAV LG G V + +G+ +CA+ +VKCWG N +GQLG GDT RG GP EMG LP V++ G ++A+GG CA++ G +KCWG GG+LGLGDT RGD P EMGD L VDLG+G ++++G HACA++ +G VKCWG N GQLG D RG GA +G+ALP VDLGTG+ AV AG FHTCALL G +KCWG SG+LG G+ + GD AG MGD L +DLGTG+ AVA+S+G +CA+L+D + KC+G N G+LG GD RG PGEMGD LPA+ L G LV + HTC G L C+G N GQLG G PG++
Sbjct: 199 GYDHACALLHDGRVKCWGRNVQGQLGLGDTEPRG-DAADEMGDALPAVDLGTGVTVVGLAAGDNHTCALLGGGSVKCWGANTSGQLGLGDTAPRGDGPG----EMGDALPTVNL--------GTGRTALAIGGGDRHTCALLDDGSVKCWGFNTGGKLGLGDTAPRGDGPGEMGDALLAVDLGAGRTAAALSVGGSHACALLDDGSVKCWGGNGQGQLGLGDAEHRGDGAGEMGDALPAVDLGTGKTAVAVHAGHFHTCALLNDGSLKCWGGNDSGELGLGDTAHRGDAAGEMGDALPAVDLGTGKKAVALSVGVFRSCALLEDASFKCWGNNTAGALGLGDTSRRGDGPGEMGDALPAIDLGAGASTTLVVTRYT---HTCARLEAGNLKCWGGNTSGQLGLGDTSARGGMPGQM 598
BLAST of mRNA_C-linearis_contig10.544.1 vs. uniprot
Match: A0A840I6P4_9ACTN (Alpha-tubulin suppressor-like RCC1 family protein/outer membrane protein OmpA-like peptidoglycan-associated protein n=1 Tax=Conexibacter arvalis TaxID=912552 RepID=A0A840I6P4_9ACTN) HSP 1 Score: 368 bits (945), Expect = 2.240e-104 Identity = 211/436 (48.39%), Postives = 265/436 (60.78%), Query Frame = 1 Query: 295 ARAASAGDSHSCVVLDGGLVKCWGEAIKGQLGHEDGIARGANVTDLLGDTLPAVPLGDGFEVAAVYSGNEFSCAISVEKAVKCWGINQAGQLGQGDTEQRGGPNGGVFEMGVNLPPVDVVGVNGSAAGLEVESIALGGSSACAVISGGLLKCWGLGEGGQLGLGDTDNRGDQPNEMGDNLPTVDLGSGSVVTSVALGARHACAVIGEGQVKCWGNNDGGQLGYEDRYPRGS--GALGNALPFVDLGTGQQVTAVAAGFFHTCALLYSGDVKCWGFGSSGQLGQGNNSSVGDVAGTMGDNLAPIDLGTGRTAVAVSLGGTHTCAVLDDGTVKCFGGNLFGSLGQGDLIPRGVAPGEMGDNLPALPLSFGEGEGLVSNVFAGTFHTCVTGAEGGLACFGYNHQGQLGASQPEDLGDDPGEV-EGLTSVDLGDGVTVLA 1593
A A +AG HSC V+DGG V+CWG GQLG D RG +L G LPAV LG G A+ + +CA+ + A+KCWG N +GQLGQGD RG G E+G L PVD+ G V +ALG C + G +KCWG G+LGLGD +RG QP EMG+ LP V+LGSG T++A G+ HACA++ +G VKCWG N+GG+LG D RG G +G+ALP VDLG+G+ TA+AAG H CALL G VKCWG +SGQLGQG+ ++ G G +GD L P+DLG+G TA A++ G H+CA+L DGTVKC+G N G LG GD PRG PGE+GD LP P+ G V+ V AG H+C +G + C+G N GQLG E GD PGE+ + L VDLG T A
Sbjct: 341 ATAVAAGYGHSCAVVDGGAVRCWGYNSDGQLGQGDTDPRGGQPGEL-GGALPAVDLGSGRSATALGASMYNTCALLDDGALKCWGDNASGQLGQGDIHDRGDQPG---ELGDALGPVDL-------GGQPVAQVALGLLHVCGLRVDGAVKCWGDNGSGRLGLGDVASRGGQPGEMGEELPAVELGSGRAATAIAAGSSHACALLDDGTVKCWGANNGGRLGLGDTAARGDAPGEMGDALPPVDLGSGRTATAIAAGSSHACALLDDGSVKCWGANASGQLGQGDRAARGGQPGELGDALPPVDLGSGATATAIATGSHHSCALLADGTVKCWGDNGSGQLGLGDTEPRGDQPGELGDALP--PVDLGSRRTAVA-VSAGRDHSCALLDDGTIRCWGGNSDGQLGLGDTEPRGDQPGELGDALPPVDLGSRRTATA 762
BLAST of mRNA_C-linearis_contig10.544.1 vs. uniprot
Match: A0A4U1HXX6_9DELT (Uncharacterized protein n=2 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1HXX6_9DELT) HSP 1 Score: 346 bits (887), Expect = 2.970e-104 Identity = 201/430 (46.74%), Postives = 265/430 (61.63%), Query Frame = 1 Query: 298 RAASAGDSHSCVVLDGGLVKCWGEAIKGQLGHEDGIARGANVTDLLGDTLPAVPLGDGFEVAAVYSGNEFSCAISVEKAVKCWGINQAGQLGQGDTEQRGG-PNGGVFEMGVNLPPVDVVGVNGSAAGLEVESIALGGSSACAVISGGLLKCWGLGEGGQLGLGDTDNRGDQPNEMGDNLPTVDLGSGSVVTSVALGARHACAVIGEGQVKCWGNNDGGQLGYEDRYPRGS--GALGNALPFVDLGTGQQVTAVAAGFFHTCALLYSGDVKCWGFGSSGQLGQGNNS-SVGDVAGTMGDNLAPIDLGTGRTAVAVSLGGTHTCAVLDDGTVKCFGGNLFGSLGQGDLIPRGVAPGEMGDNLPALPLSFGEGEGLVSNVFAGTFHTCVTGAEGGLACFGYNHQGQLGASQPEDLGDDPGEV-EGLTSVDLG 1572
+A + G HSC +L G +KCWG GQLG D RG ++ GD LPAV LG G A+ G FSCA+ + VKCWG + GQLGQGDT++RGG PN +MG LP +++ G+ A S + G ACA++ GG +KCWG GQLGLGDT++RGD+P EMGD LP VDLG+G ++ G +ACA++ + VKCWG GQLG D+ RG G +G+ALP VDLGTG V A+AAG H C LL +G VKCWG G LG GN++ ++GD G MGD L +DLGTG+ ++ + +TCAVLDD +VKC+G ++G+LGQG+ G PGEMGD L LP+ G G+ VS V G +HTC +G + C+G + GQLG GD+PGE+ + L +V+LG
Sbjct: 40 KALAVGGFHSCALLSDGRLKCWGHNYGGQLGVGDENIRGDEPGEM-GDQLPAVDLGTGKSPVAISLGQYFSCALLNDGTVKCWGDSYRGQLGQGDTQRRGGAPN----QMGDALPAINL----GTGAIAVAVSASTSGGFACALLQGGAVKCWGENFKGQLGLGDTNHRGDEPGEMGDALPAVDLGTGKKAIAIVTGYSNACALLDDFSVKCWGEGLYGQLGLGDKNGRGDEPGEMGDALPAVDLGTGGIVHAIAAGAAHNCVLLSTGRVKCWGSNHHGALGLGNSTLALGDEPGEMGDMLPDVDLGTGKMVKSIRVEHHYTCAVLDDDSVKCWGEGMYGNLGQGNKNILGDNPGEMGDAL--LPVDLGAGK-TVSAVAPGLYHTCALLTDGSVKCWGNSGNGQLGQGDKSTRGDEPGEMGDNLPTVNLG 457
BLAST of mRNA_C-linearis_contig10.544.1 vs. uniprot
Match: A0A520PN85_9PROT (Big_5 domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A520PN85_9PROT) HSP 1 Score: 346 bits (888), Expect = 1.540e-102 Identity = 190/427 (44.50%), Postives = 247/427 (57.85%), Query Frame = 1 Query: 307 SAGDSHSCVVLDGGLVKCWGEAIKGQLGHEDGIARGANVTDLLGDTLPAVPLGDGFEVAAVYSGNEFSCAISVEKAVKCWGINQAGQLGQGDTEQRGGPNGGVFEMGVNLPPVDVVGVNGSAAGLEVESIALGGSSACAVISGGLLKCWGLGEGGQLGLGDTDNRGDQPNEMGDNLPTVDLGSGSVVTSVALGARHACAVIGEGQVKCWGNNDGGQLGYEDRYPRGSGA--LGNALPFVDLGTGQQVTAVAAGFFHTCALLYSGDVKCWGFGSSGQLGQGNNSSVGDVAGTMGDNLAPIDLGTGRTAVAVSLGGTHTCAVLDDGTVKCFGGNLFGSLGQGDLIPRGVA-----PGEMGDNLPALPLSFGE-------GEGLVSNVFAGTFHTCVTGAEGGLACFGYNHQGQLGASQPEDLGDDPGEV 1545
+AG H+C +L+ VKCWG+ GQLG D +RG ++ G L +V LG G A+ + +CAI ++KCWG N GQLGQG+T G EMG NL P+D+ G +IA GG CA++ +KCWG+ GQLG+G TD+RGD NEMGDNLP++DLG+G T++A G H+CA++ VKCWG ND GQLG D RG GA +G+ L VDLGTG+ ++ AG+ HTCALL + VKCWG + GQ+G G +GD AG MGD+L IDLGTGRTA A+S G +HTCA+LD+ ++KC+G N G LG GD RG +MGDNLP++ L G GEGL HTC + C+GYN GQLG + GD E+
Sbjct: 190 TAGAYHTCTILENSSVKCWGKNDSGQLGLGDTNSRGDGANEM-GANLSSVDLGTGRTAKAIAANRVATCAILDNSSIKCWGKNDRGQLGQGNTNSLGDAG---SEMGDNLTPIDL------GTGRTATAIAGGGWHNCAILDNSSIKCWGINSAGQLGIGSTDDRGDGANEMGDNLPSIDLGTGRTATAIAAGGAHSCAILDNSAVKCWGKNDAGQLGLGDTNNRGDGADEMGDDLDAVDLGTGRTAVSITAGYAHTCALLDNYSVKCWGDAAEGQMGTGKTFDLGDAAGEMGDSLTAIDLGTGRTATAISAGRSHTCAMLDNSSIKCWGSNDSGQLGLGDTSNRGNTVQGDGSSQMGDNLPSIDLGTGRTARGVITGEGL---------HTCTIMDNSSIKCWGYNASGQLGIGDTDSRGDGANEM 597
BLAST of mRNA_C-linearis_contig10.544.1 vs. uniprot
Match: A0A835T094_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T094_9CHLO) HSP 1 Score: 365 bits (938), Expect = 1.180e-101 Identity = 209/429 (48.72%), Postives = 254/429 (59.21%), Query Frame = 1 Query: 307 SAGDSHSCVVLDGGLVKCWGEAIKGQLGHEDGIARGANVTDLLGDTLPAVPLGDGFEVAAVYSGNEFSCAISVEKAVKCWGINQAGQLGQGDTEQRGGPNGGVFEMGVNLPPVDVVGVNGSAAGLEVESIALGGSSACAVISGGLLKCWGLGEGGQLGLGDTDNRGDQPNEMGDNLPTVDLGSGSVVTSVALGARHACAVIGEGQVKCWGNNDGGQLGYEDRYPRGSGA--LGNALPFVDLGTGQQVTAVAAGFFHTCALLYSGDVKCWGFGSSGQLGQGNNSSVGDVAGTMGDNLAPIDLGTGRTAVAVSLGGTHTCAVLDDGTVKCFGGNLFGSLGQGDLIPRGVAPGEMGDNLPALPLSFGEGEGLVSNVFAGTFHTCVTGAEGGLACFGYNHQGQLGASQPEDLGDDPGEV-EGLTSVDLGDGVT 1584
SAG H+C +LD G VKCWG GQLG D RG ++ GDTLPAV LG G A+ G+ +CA+ +VKCWG N G LG GDT +RG G EMG LP V + G +I+ GG CA++ G +KCWG + GQLGLGDT RGD P EMGD LP V LG+G T+++ G H CA++ G VKCWG ND G LG D PRG G +G+ LP V LGTG+ TA+ AG HTCALL +G VKCWG G LG G+ S GD G MGD L + LGTGRTA A+S G +TCA+LD+G+VKC+G N G LG GD RG PGEMGD LPA+ L G +S AG +HTC G + C+GYN GQLG + GD P E+ + L +V LG G T
Sbjct: 1513 SAGFKHTCALLDNGSVKCWGYNYDGQLGLGDTSPRGDGPGEM-GDTLPAVALGTGRTATAISVGSWHTCALLDNGSVKCWGYNDYGYLGLGDTSRRGNELG---EMGDRLPAVAL------GTGRTATAISAGGWHTCALLDNGSVKCWGWNQFGQLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAISAGVLHTCALLDNGSVKCWGCNDYGYLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAIFAGVLHTCALLDNGSVKCWGCNDYGYLGLGDTSYRGDGPGEMGDTLPAVALGTGRTATAISAGSRYTCALLDNGSVKCWGWNDDGQLGLGDTSRRGDGPGEMGDTLPAVELGTGRTATAIS---AGGWHTCALLDNGSVKCWGYNDAGQLGLGDTSNRGDGPSEMGDTLPAVALGTGRT 1928 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.544.1 >prot_C-linearis_contig10.544.1 ID=prot_C-linearis_contig10.544.1|Name=mRNA_C-linearis_contig10.544.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=740bp MMESVAVAIAVVVCGVVLLPGVARAASAGDSHSCVVLDGGLVKCWGEAIKback to top mRNA from alignment at C-linearis_contig10:2134021..2149357- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.544.1 ID=mRNA_C-linearis_contig10.544.1|Name=mRNA_C-linearis_contig10.544.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15337bp|location=Sequence derived from alignment at C-linearis_contig10:2134021..2149357- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:2134021..2149357- >mRNA_C-linearis_contig10.544.1 ID=mRNA_C-linearis_contig10.544.1|Name=mRNA_C-linearis_contig10.544.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4440bp|location=Sequence derived from alignment at C-linearis_contig10:2134021..2149357- (Chordaria linearis ClinC8C monoicous)back to top |