mRNA_C-linearis_contig10.542.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.542.1

>prot_C-linearis_contig10.542.1 ID=prot_C-linearis_contig10.542.1|Name=mRNA_C-linearis_contig10.542.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=576bp
PPAPRVSAEVLRLRVATETVRTLRADTEEAPDVVCTIEVCQGRPYLPGRL
QRFPNVATSTGSYRAVHSYRVPPSGYRSSTDGPSPGGGGGASTAGSGGSV
FSAPSPGGASSSAWRRGGGEGGAKGMAWVSVTDVKPSHWYNVRHRFSWRV
DGSSGLQDVEEVITATRHVHTEAYSPPVTPPPRPYAVLECSRRRHQQQHT
QQHTQQGGGRRSSREHTGRRSEEGLVFHFRLRWGPGVRGAGRSEERGFGQ
GAPQEIEYILQESTCEPRSSTADTASAKKAKASSPASSGGGNGGGEISLG
GTSPNNLRSTGERSPKPGATTSQGLKARSSGGNPAAATRNNATWSPGGLG
GRGNPAAATADEEDDPFSEKLGRGEWRTIRRTRKTRETVELPHAPSSPFP
SREGGAVPAGLWYRVGARRRDGPLKVVFSEVLEVPAALLARIYGVEEISA
TRQPLPPPKLASKKRAAGGARPGPLAGEVARRDGARRAVRGLEDEEAVVF
LRAFEMSEEEDGFPTRVAWELQSEFWSRQAVEVSDEEKEATLKAEAESIQ
CTLGFPVNTKNIADIIREIDATARG*
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mRNA from alignment at C-linearis_contig10:2087606..2092722+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.542.1 ID=mRNA_C-linearis_contig10.542.1|Name=mRNA_C-linearis_contig10.542.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5117bp|location=Sequence derived from alignment at C-linearis_contig10:2087606..2092722+ (Chordaria linearis ClinC8C monoicous)
CCCCCGGCCCCAAGGGTCTCCGCGGAGGTGTTGCGGCTGCGCGTGGCGAC
GGAAACGGTCCGGACCCTGCGAGCAGACACCGAGGAGGCGCCAGACGTCG
TGTGCACCATCGAGGTGACTCATGTTTTTCACGAGCAAGCGCACCGGTGT
ATGCTTCGAGCCATCATATGTAGACCGGTGCCTAACGTTCATCCCCGTCA
AAGCATGTTTCGAAACCTCTCTATGAAATACCAGGACCGTAGGTGTTATG
CATTTTGCTGCGCGGTCAGAATCATGCCCGACACCACTCTACGGAGTATC
TCATACATACGCTACCGCGTTCTCATGCTTTCACGGGAGACCCTTCTCTC
CTGTGAGGAAGTTTCAGCTATGGAATTCCTGATTTATATTCCAAAATCGC
CAGAAGAAGCCCGGTGCGCCTCATCAAGTGGTCCGTCGACGCCCAACCCT
TCTCGTTTCGGAGACACACGCGTCCATTAATTAGGTAAATGCTGCTGTGT
ATGTGTCGCGATTTGCAAAATTCGCTCCAACCCTGCCAGGTTTGTCAGGG
GCGGCCGTACCTTCCCGGGAGGCTGCAGCGATTCCCGAACGTCGCCACAT
CAACGGGGTCGTATCGCGCTGTTCACTCCTACAGAGGTGGTCATATAATT
CTGTTTGAGCTTTGCACAAGCCGACTGACCCGGAGAGAGCCCAGCTAGCA
ATACTCGCTCGGCGTGGTGTGAAATTGGTCAATTTACCACCATGGCCTGT
CCGCGAAGATGCTGCATTTATTGCCGGGTACCACCAGTTCCGGCGGCGTG
TCTAGACTACACCTCGTGTTCTGCTGTCTCGTCTAGGTTATGATCGTCTC
TCGCTACCGGGAGGCGAGAAGGCCTAGCTCTCCACACCACTTGTTAGTCT
TAGTATCCGGTACTGGTTTGTTTTCTCGGCCGCTATGATACGACTGAAAT
CTGCCGATTGGTAGAGCCAGTTCACGCATCGAACGCCGTGGGAGACAGAG
AACCGCAAACAAACTCGATTGTCGCCCGCGCCAACATTGCATGGTCGCCC
TCCTTGCCGTCACGTCGTGAGCGCCGAGCCGTGCGTCTGGAGCATTTTTC
CCTGGCCAAAACACTGAGTTTGACATAATTTGTACGTGACTGTGACTCAG
TCGACCTATTCACATACATCGTGGTGTTTAGCGTGATAACTTTACAAAAC
CATGCGATTGAACAGCTGGCCGCACCGGTATGCGCGGACACAAACAAACA
GCAAGAGAGCAGATCTGTCAGCACTTTTATTCGAGGCTGGCCAAGTGGAA
AAGACTCCCCGGTCCTCCCCCCACCCCTAACCCTCCTCCTCTGCGACGGC
ATAACAGTCCCGCCTAGCGGGTACCGTTCCTCCACCGACGGACCCTCGCC
AGGAGGAGGAGGAGGGGCAAGCACCGCCGGATCGGGCGGGTCTGTGTTTT
CCGCTCCAAGCCCTGGTGGCGCGTCATCCTCGGCTTGGCGCAGGGGTGGC
GGGGAGGGGGGCGCCAAGGGGATGGCGTGGGTGTCGGTGACCGACGTGAA
GCCGAGCCACTGGTACAATGTGCGACACAGGTTTTCCTGGAGGGTCGACG
GCAGTTCTGGCCTCCAAGATGTGGAGGAGGTATGGTTACTTGGAGTATCA
ACATGGTGAAAGTATCGCCCCCCCCGCCCGCCTCCCGAATGGGCGCTAGC
TTTGTCAAACGTGTGAAAAGCTGTCTACCTAGGGGGGGGCGATCGCAGAT
CGGCACACTAACCTCCCCCCGCCGCTCTCCGCAGCATCACTGGTACGAAA
TCAACCATTGGTACCGGTTCGGTGTTTAGATCTTGCTTGTTTGTGTGGCG
GGATTGCGTCAGTGATGGGCGAACGAGGCGCGGGAGCGTCGGATGCCTTT
GCGTTGTCGACGACGTTTCATTTCGAGCATTTGCCTCAGCTTTTTATTTG
ATGTACATATTTCTTGCGTCCTACAGTAGGAGGCCGCCTTAAAGCGAATG
GGCATTGAGCCGTGATCATCGCTGAACGTTACCAGCTGCACACACGACAA
GCTGTGTACCGTAGAGAGATGCTCCCCCGGCACCGCTGGTGATCACCCCC
CCCCGCGATGCTCCTTTTCTCCGTGTCCTCGTTGGTCCTCCATTCCCCTC
CGCTAATTGACTTCTTGGCAGGTGATCACGGCAACGCGCCACGTGCACAC
CGAGGCCTATTCCCCTCCGGTCACCCCTCCCCCCAGGCCGTACGCGGTAC
TGGAGTGCTCGCGTCGACGCCACCAACAGCAGCACACGCAGCAGCACACG
CAGCAGGGCGGCGGTCGGCGGTCGTCCAGGGAGCACACGGGGCGGAGGAG
CGAAGAAGGGCTAGTCTTCCACTTTCGACTGCGGTGGGGCCCGGGGGTGC
GAGGGGCGGGGCGGAGCGAAGAACGGGGCTTCGGCCAGGGCGCTCCGCAG
GTATTGATTGATATCTTCAAAAGAGGGAAATGCTGACGGAAATCACCCTG
CATTCTTCCAAGATAGGTTGTACCTCGTTATGCTGAGGAACGTTGCGGCC
CTGATTGTCACGTGACCAAGCCCGCAGAGAACGTTACCTGCGCCCCTTGG
AACGAATATGTCTATTGGGGATGGATAGCCCTACCTATAACGCCAACCCC
GATCCCCGGCCTCCACCTAGGAAATTGAGTACATTCTGCAAGAGAGCACG
TGCGAGCCCCGAAGCAGCACCGCCGATACCGCGAGCGCCAAGAAGGCGAA
GGCTTCCTCGCCAGCAAGCAGCGGCGGCGGCAACGGCGGCGGCGAAATTA
GCCTTGGCGGCACAAGCCCCAACAACCTTCGATCGACGGGTGAAAGATCT
CCGAAGCCGGGCGCAACAACTAGCCAAGGCCTGAAAGCCCGAAGCAGCGG
CGGCAACCCCGCGGCCGCTACCCGAAACAACGCTACCTGGTCCCCCGGTG
GCCTGGGTGGCCGCGGGAACCCCGCCGCTGCCACGGCTGATGAAGAGGAC
GATCCTTTCTCCGAAAAACTGTTAGCGGGCGGCGGCGGCGGCCCAAAGCC
AGCAAGATCCGGTAGCAAGCGCCACGGCGAGAGCGGGCGGGGCGAATGGA
GGACGATCCGCAGGACTAGAAAGACCCGGGAGACGGTTGAGCTTCCGCAC
GCTCCGTCGTCGCCGTTTCCGTCCCGGGAGGGAGGCGCCGTGCCTGCGGG
GCTGTGGTACCGCGTGGGGGCGCGTCGGAGAGACGGGCCGCTGAAGGTGG
TATTCAGGTGAGGTCTAAGGCAAGGCCGTGGAGAGCGACTACACCGCTTG
GGAAAATAGGTGCGAGGAAAAAGTGTTACTGGTTGTGTGAGAGCGATAGT
GACAGTTGCCCGTTTGTCAAGGCAACCCCTTGTGGTAAAGGCAACGCCCC
CACATACGAGATATTGTTTGGGAGGTTGGTATCAATGACCCTTGTGCCCA
AAACGCCTCACACCCTCGTGACGTCCTCCCCCCACTCCGCGCCGACAAAC
ACCCAGCGAGGTGCTCGAGGTACCGGCCGCTCTGCTGGCTCGCATCTACG
GCGTCGAGGAAATATCGGCAACCCGCCAACCCTTGCCGCCGCCGAAACTC
GCCTCCAAGAAACGGGCGGCGGGGGGTGCAAGACCAGGGCCTTTGGCCGG
CGAGGTCGCGCGGCGGGATGGGGCACGCCGGGCTGTGCGGGGGCTGGAAG
ACGAAGAGGCGGTGGTCTTCCTGAGGGCGTTCGAGATGTCCGAAGAGGAG
GACGGCTTCCCGACGCGCGTGGCGTGGGAGCTGCAGAGCGAGTTTTGGTC
TCGACAGGCTGTCGAGGTGTGTGACGGGACTTTCAAGGATTTCCGACTCG
AGAGTCGCTGGTGTTGTGGTCGCTGTGCAGTTTTGCTTTGCTTTTGTGTT
TTTGACAAGACCAGACGCATGCGCAAATAATTTCAAGCTGGCGACCCATC
CATGTTTTTTGGGGTAGCATTCCCCTGACGAATCTTGAAATACTATACTC
CCCTCAACCGAACTTTGTGTTTGCGTCGTCAACAAAAAACTGCCGATGTT
TTCCTTCGCCGAGTAGTCGATGAGCCCCTGTGACGATCTTGTTTGTGTTC
TTTGGAAACACCCGTCTCGCTTACATGATTACAAACCCTTGCCTTTTGTG
TAGAAGCCTTACGCGGTATCCTGGAACGACTTTTTACTCTACAATTTCAA
AGCCACATGTGCTCTGAAGATTCGGTGATGTAGGTTTAGCGATGCTGGAC
ACTTGCTCGAGGCGACACTTCGAGAGCACGGAACGGCATCAAACTCCGTC
GAGTACGCCAAAGCGTGCCTTGCGGAGGTCCCCCCATAAAATTTTGACGT
CGGGTCTTCCTCGAACGCTCTCCACAAGTAAACCTCGTTGAAGGGGTCGT
CTTCCCTGGGGACACCAACCTGTCGCCTGGCCCCTCGCTTGCCCACGCGC
GAAACAGCCACCCCGCGTGCCATCCCTATGTTCAACCTTGGGTCGCAGGA
AAGCGAAAGGCCGTCGCTAGCCGACGAGGAGAAGGAGGCCACGTTGAAGG
CAGAGGCGGAGAGCATCCAGTGCACTCTCGGGTTTCCCGTGAACACCAAA
AACATCGCAGGTGAAATATTCTGTGACAGCAGTACACAAACAGACGGCGT
GGGTCGATGTGTGGCTAGGGTTGGCGCTATTGGTAGGATAGGGGCTAGCG
GATGTGCGCGTTTCGGGAAGTTGGCATTACCGCAGATGTTGTGCGGCAAG
TAACCGCGTCTGGTGGACGGCTTGATTCTGTGAAGTGCACTGAGTAGTTT
TTCCACGCCGTGTTCGATGCTACAGCAGTAGTGTTCCCCAAGATCAGCAG
CCTTTGACCTAAGACTATAATATAACTCTTTCAACACATTATGCATGGAT
TCTCCCGATAATTTTGGGAGTTGTGTTGCCTACAAGAAACATGCGGACCG
CCGGCAAAAAAACGGACGTCTACAGTAGCTCTGCGTCCCTGTTTGTTTAA
ATCGAGCTGTACCTTCGTTCTATTCACGCGGTTTGTTTTGCTCCCACGGT
TGGTTGCCGCGCCTTGCGGGGGGAAACAGATATCATCCGCGAAATTGATG
CCACGGCGAGGGGCTAG
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Coding sequence (CDS) from alignment at C-linearis_contig10:2087606..2092722+

>mRNA_C-linearis_contig10.542.1 ID=mRNA_C-linearis_contig10.542.1|Name=mRNA_C-linearis_contig10.542.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3456bp|location=Sequence derived from alignment at C-linearis_contig10:2087606..2092722+ (Chordaria linearis ClinC8C monoicous)
CCCCCGGCCCCAAGGGTCTCCGCGGAGGTGTTGCGGCTGCGCGTGGCGAC
GGAAACGGTCCGGACCCTGCGAGCAGACACCGAGGAGGCGCCAGACGTCG
TGTGCACCATCGAGCCCCCGGCCCCAAGGGTCTCCGCGGAGGTGTTGCGG
CTGCGCGTGGCGACGGAAACGGTCCGGACCCTGCGAGCAGACACCGAGGA
GGCGCCAGACGTCGTGTGCACCATCGAGGTTTGTCAGGGGCGGCCGTACC
TTCCCGGGAGGCTGCAGCGATTCCCGAACGTCGCCACATCAACGGGGTCG
TATCGCGCTGTTCACTCCTACAGAGGTTTGTCAGGGGCGGCCGTACCTTC
CCGGGAGGCTGCAGCGATTCCCGAACGTCGCCACATCAACGGGGTCGTAT
CGCGCTGTTCACTCCTACAGAGTCCCGCCTAGCGGGTACCGTTCCTCCAC
CGACGGACCCTCGCCAGGAGGAGGAGGAGGGGCAAGCACCGCCGGATCGG
GCGGGTCTGTGTTTTCCGCTCCAAGCCCTGGTGGCGCGTCATCCTCGGCT
TGGCGCAGGGGTGGCGGGGAGGGGGGCGCCAAGGGGATGGCGTGGGTGTC
GGTGACCGACGTGAAGCCGAGCCACTGGTACAATGTGCGACACAGGTTTT
CCTGGAGGGTCGACGGCAGTTCTGGCCTCCAAGATGTGGAGGAGTCCCGC
CTAGCGGGTACCGTTCCTCCACCGACGGACCCTCGCCAGGAGGAGGAGGA
GGGGCAAGCACCGCCGGATCGGGCGGGTCTGTGTTTTCCGCTCCAAGCCC
TGGTGGCGCGTCATCCTCGGCTTGGCGCAGGGGTGGCGGGGAGGGGGGCG
CCAAGGGGATGGCGTGGGTGTCGGTGACCGACGTGAAGCCGAGCCACTGG
TACAATGTGCGACACAGGTTTTCCTGGAGGGTCGACGGCAGTTCTGGCCT
CCAAGATGTGGAGGAGGTGATCACGGCAACGCGCCACGTGCACACCGAGG
CCTATTCCCCTCCGGTCACCCCTCCCCCCAGGCCGTACGCGGTACTGGAG
TGCTCGCGTCGACGCCACCAACAGCAGCACACGCAGCAGCACACGCAGCA
GGGCGGCGGTCGGCGGTCGTCCAGGGAGCACACGGGGCGGAGGAGCGAAG
AAGGGCTAGTCTTCCACTTTCGACTGCGGTGGGGCCCGGGGGTGCGAGGG
GCGGGGCGGAGCGAAGAACGGGGCTTCGGCCAGGGCGCTCCGCAGGTGAT
CACGGCAACGCGCCACGTGCACACCGAGGCCTATTCCCCTCCGGTCACCC
CTCCCCCCAGGCCGTACGCGGTACTGGAGTGCTCGCGTCGACGCCACCAA
CAGCAGCACACGCAGCAGCACACGCAGCAGGGCGGCGGTCGGCGGTCGTC
CAGGGAGCACACGGGGCGGAGGAGCGAAGAAGGGCTAGTCTTCCACTTTC
GACTGCGGTGGGGCCCGGGGGTGCGAGGGGCGGGGCGGAGCGAAGAACGG
GGCTTCGGCCAGGGCGCTCCGCAGGAAATTGAGTACATTCTGCAAGAGAG
CACGTGCGAGCCCCGAAGCAGCACCGCCGATACCGCGAGCGCCAAGAAGG
CGAAGGCTTCCTCGCCAGCAAGCAGCGGCGGCGGCAACGGCGGCGGCGAA
ATTAGCCTTGGCGGCACAAGCCCCAACAACCTTCGATCGACGGGTGAAAG
ATCTCCGAAGCCGGGCGCAACAACTAGCCAAGGCCTGAAAGCCCGAAGCA
GCGGCGGCAACCCCGCGGCCGCTACCCGAAACAACGCTACCTGGTCCCCC
GGTGGCCTGGGTGGCCGCGGGAACCCCGCCGCTGCCACGGCTGATGAAGA
GGACGATCCTTTCTCCGAAAAACTGAAATTGAGTACATTCTGCAAGAGAG
CACGTGCGAGCCCCGAAGCAGCACCGCCGATACCGCGAGCGCCAAGAAGG
CGAAGGCTTCCTCGCCAGCAAGCAGCGGCGGCGGCAACGGCGGCGGCGAA
ATTAGCCTTGGCGGCACAAGCCCCAACAACCTTCGATCGACGGGTGAAAG
ATCTCCGAAGCCGGGCGCAACAACTAGCCAAGGCCTGAAAGCCCGAAGCA
GCGGCGGCAACCCCGCGGCCGCTACCCGAAACAACGCTACCTGGTCCCCC
GGTGGCCTGGGTGGCCGCGGGAACCCCGCCGCTGCCACGGCTGATGAAGA
GGACGATCCTTTCTCCGAAAAACTCGGGCGGGGCGAATGGAGGACGATCC
GCAGGACTAGAAAGACCCGGGAGACGGTTGAGCTTCCGCACGCTCCGTCG
TCGCCGTTTCCGTCCCGGGAGGGAGGCGCCGTGCCTGCGGGGCTGTGGTA
CCGCGTGGGGGCGCGTCGGAGAGACGGGCCGCTGAAGGTGGTATTCAGCG
GGCGGGGCGAATGGAGGACGATCCGCAGGACTAGAAAGACCCGGGAGACG
GTTGAGCTTCCGCACGCTCCGTCGTCGCCGTTTCCGTCCCGGGAGGGAGG
CGCCGTGCCTGCGGGGCTGTGGTACCGCGTGGGGGCGCGTCGGAGAGACG
GGCCGCTGAAGGTGGTATTCAGCGAGGTGCTCGAGGTACCGGCCGCTCTG
CTGGCTCGCATCTACGGCGTCGAGGAAATATCGGCAACCCGCCAACCCTT
GCCGCCGCCGAAACTCGCCTCCAAGAAACGGGCGGCGGGGGGTGCAAGAC
CAGGGCCTTTGGCCGGCGAGGTCGCGCGGCGGGATGGGGCACGCCGGGCT
GTGCGGGGGCTGGAAGACGAAGAGGCGGTGGTCTTCCTGAGGGCGTTCGA
GATGTCCGAAGAGGAGGACGGCTTCCCGACGCGCGTGGCGTGGGAGCTGC
AGAGCGAGTTTTGGTCTCGACAGGCTGTCGAGGTGTCGAGGTGCTCGAGG
TACCGGCCGCTCTGCTGGCTCGCATCTACGGCGTCGAGGAAATATCGGCA
ACCCGCCAACCCTTGCCGCCGCCGAAACTCGCCTCCAAGAAACGGGCGGC
GGGGGGTGCAAGACCAGGGCCTTTGGCCGGCGAGGTCGCGCGGCGGGATG
GGGCACGCCGGGCTGTGCGGGGGCTGGAAGACGAAGAGGCGGTGGTCTTC
CTGAGGGCGTTCGAGATGTCCGAAGAGGAGGACGGCTTCCCGACGCGCGT
GGCGTGGGAGCTGCAGAGCGAGTTTTGGTCTCGACAGGCTGTCGAGGTGT
CCGACGAGGAGAAGGAGGCCACGTTGAAGGCAGAGGCGGAGAGCATCCAG
TGCACTCTCGGGTTTCCCGTGAACACCAAAAACATCGCAGCCGACGAGGA
GAAGGAGGCCACGTTGAAGGCAGAGGCGGAGAGCATCCAGTGCACTCTCG
GGTTTCCCGTGAACACCAAAAACATCGCAGATATCATCCGCGAAATTGAT
GCCACGGCGAGGGGCTAGATATCATCCGCGAAATTGATGCCACGGCGAGG
GGCTAG
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