Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 909 |
| Cds size | 909 |
| Stop | 1 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927339.7821128-CDS-C-linearis_contig10:2085591..2085906 | 1622927339.7821128-CDS-C-linearis_contig10:2085591..2085906 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 2085592..2085906 + |
| 1690879637.0862617-CDS-C-linearis_contig10:2085591..2085906 | 1690879637.0862617-CDS-C-linearis_contig10:2085591..2085906 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 2085592..2085906 + |
| 1622927339.792106-CDS-C-linearis_contig10:2086682..2087276 | 1622927339.792106-CDS-C-linearis_contig10:2086682..2087276 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 2086683..2087276 + |
| 1690879637.096255-CDS-C-linearis_contig10:2086682..2087276 | 1690879637.096255-CDS-C-linearis_contig10:2086682..2087276 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 2086683..2087276 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.541.1 >prot_C-linearis_contig10.541.1 ID=prot_C-linearis_contig10.541.1|Name=mRNA_C-linearis_contig10.541.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=303bp
MAYSIGTMLSGPGDQTQQQQRHDVSPRKRRLYELIISGFEQLLSQQGRIH
ADGRGAGYVVWIPRREQYKQQLQQEAWDGEAEGEEGEDESPLVVLYGGGY
DGLFSGGLEQALDCCDCLSAPLRLVRIPVELLPPPAHSPPRSSSAKQEAS
IAALSSSARPLEESAEYNSRGPFSPAPLSSRHKEKEEKKKKKQFGFVGVT
PEPDSGWGVSRKRPGPGGVGGGRGGDENCPERGRSGRGGARDDGLGREGG
CGWEGCTEGDDDPREEGAAVAAPRNGSVVGEASAGKQFQQREMLDLWWLT
GE* back to topmRNA from alignment at C-linearis_contig10:2085592..2087276+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.541.1 ID=mRNA_C-linearis_contig10.541.1|Name=mRNA_C-linearis_contig10.541.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1685bp|location=Sequence derived from alignment at C-linearis_contig10:2085592..2087276+ (Chordaria linearis ClinC8C monoicous)
ATGGCGTACAGCATAGGGACTATGCTGTCGGGCCCTGGCGACCAGACCCA
GCAACAGCAACGGCACGACGTCTCGCCACGAAAGCGCCGGTTGTATGAAC
TCATCATCAGCGGGTTCGAGCAATTACTCTCGCAGCAGGGGCGCATACAC
GCCGACGGGCGTGGGGCGGGGTACGTTGTATGGATCCCGCGCAGAGAGCA
ATACAAGCAGCAGCTGCAGCAGGAGGCATGGGATGGAGAGGCAGAGGGAG
AGGAGGGGGAAGATGAGAGTCCGCTTGTTGTGCTGTACGGTGGTGGTTAC
GATGGCCTGTTTTCGGTGAGAGTATAATATGCTGTGTCTTAAGACAGAAA
ACAAATAAATCATGATGCGGTAGAGAGAGAAAAGGTTTTGTGGCACGAAT
GTATCGCTGATAAACTATATAGCTCTTTGCGGGGTGGGATGTACGAGTTC
CTGTCGGTCGTGCACAGAACCAACCACATCTTGCGCAGGGATACATATAC
TTCGAAGTATATGTAGACGATCTCCATGTCGAATTCGTAGAATAGTCTAC
GGGTTCACACGATCCACGGTAGAAGAGCGGCAATAAAGGACCAATACCAA
TCTCAATTGGTGAGTTCGTGGCTCCTGGCGAAATCCACGCTCGCAAACGA
CCGTTTGAGTGGTGCGCCGTCGACCGATGAAGTATTTTGCTTTGCAAGAT
GTCACACATGGCTGACTGGGCATGCCGCAAACACCCATGTCGTCTTGGTG
GTGGATGTACAATTGCAAGTGTGAACAGGGAGAGCCGTAGATTTGGCGGC
TCTGGTTCGAGCCGGCCGGAGGATAGCCTCGTTTCCGACAAGCTACATGG
TGCAAGAAAAGTCTATCACGCTGTCAGTAGTGCCTCCACCGTCGTATTTT
TTTGCGCTACTGTATGTACCACCAATTGCCTCGGACTTGAGGAACGGGGT
CGCCAGTCGTACCACAATACACTCAACGCTTTGGTTCAGACGGGTACGCT
TCGAAATACATCTGTCGCGACTCCTCAAGACCTTCGCGACCGAGTTTCAC
CCCCCCCCCGCTCCCTTCCCATTTCCCCAACAACCCAAAAGGGCGGGCTC
GAGCAAGCCCTCGACTGCTGCGACTGCCTCTCCGCCCCGCTCCGATTGGT
GAGAATCCCGGTGGAGCTCCTGCCGCCGCCGGCGCATTCCCCCCCGCGAA
GCTCTTCCGCCAAGCAAGAAGCCTCAATCGCCGCCCTATCTTCGTCGGCC
AGACCACTCGAAGAAAGCGCCGAGTATAATTCGCGCGGTCCTTTTTCTCC
TGCTCCGCTCTCAAGCCGACACAAGGAGAAGGAGGAGAAGAAGAAGAAGA
AGCAGTTCGGGTTCGTGGGGGTGACGCCGGAACCCGACAGTGGTTGGGGC
GTGTCCAGAAAAAGGCCTGGGCCTGGTGGCGTCGGAGGAGGACGAGGCGG
GGACGAGAACTGTCCAGAGCGCGGAAGAAGCGGAAGAGGCGGCGCGAGGG
ACGACGGCCTAGGTCGCGAGGGGGGTTGTGGGTGGGAAGGTTGTACCGAG
GGGGACGATGATCCGAGAGAAGAAGGGGCGGCGGTGGCGGCGCCTAGGAA
TGGGAGTGTTGTCGGGGAGGCGAGCGCGGGGAAGCAGTTTCAGCAGCGCG
AGATGTTGGACCTCTGGTGGTTGACAGGCGAGTAG back to topCoding sequence (CDS) from alignment at C-linearis_contig10:2085592..2087276+ >mRNA_C-linearis_contig10.541.1 ID=mRNA_C-linearis_contig10.541.1|Name=mRNA_C-linearis_contig10.541.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1818bp|location=Sequence derived from alignment at C-linearis_contig10:2085592..2087276+ (Chordaria linearis ClinC8C monoicous)
ATGGCGTACAGCATAGGGACTATGCTGTCGGGCCCTGGCGACCAGACCCA
GCAACAGCAACGGCACGACGTCTCGCCACGAAAGCGCCGGTTGTATGAAC
TCATCATCAGCGGGTTCGAGCAATTACTCTCGCAGCAGGGGCGCATACAC
GCCGACGGGCGTGGGGCGGGGTACGTTGTATGGATCCCGCGCAGAGAGCA
ATACAAGCAGCAGCTGCAGCAGGAGGCATGGGATGGAGAGGCAGAGGGAG
AGGAGGGGGAAGATGAGAGTCCGCTTGTTGTGCTGTACGGTGGTGGTTAC
GATGGCCTGTTTTCGATGGCGTACAGCATAGGGACTATGCTGTCGGGCCC
TGGCGACCAGACCCAGCAACAGCAACGGCACGACGTCTCGCCACGAAAGC
GCCGGTTGTATGAACTCATCATCAGCGGGTTCGAGCAATTACTCTCGCAG
CAGGGGCGCATACACGCCGACGGGCGTGGGGCGGGGTACGTTGTATGGAT
CCCGCGCAGAGAGCAATACAAGCAGCAGCTGCAGCAGGAGGCATGGGATG
GAGAGGCAGAGGGAGAGGAGGGGGAAGATGAGAGTCCGCTTGTTGTGCTG
TACGGTGGTGGTTACGATGGCCTGTTTTCGGGCGGGCTCGAGCAAGCCCT
CGACTGCTGCGACTGCCTCTCCGCCCCGCTCCGATTGGTGAGAATCCCGG
TGGAGCTCCTGCCGCCGCCGGCGCATTCCCCCCCGCGAAGCTCTTCCGCC
AAGCAAGAAGCCTCAATCGCCGCCCTATCTTCGTCGGCCAGACCACTCGA
AGAAAGCGCCGAGTATAATTCGCGCGGTCCTTTTTCTCCTGCTCCGCTCT
CAAGCCGACACAAGGAGAAGGAGGAGAAGAAGAAGAAGAAGCAGTTCGGG
TTCGTGGGGGTGACGCCGGAACCCGACAGTGGTTGGGGCGTGTCCAGAAA
AAGGCCTGGGCCTGGTGGCGTCGGAGGAGGACGAGGCGGGGACGAGAACT
GTCCAGAGCGCGGAAGAAGCGGAAGAGGCGGCGCGAGGGACGACGGCCTA
GGTCGCGAGGGGGGTTGTGGGTGGGAAGGTTGTACCGAGGGGGACGATGA
TCCGAGAGAAGAAGGGGCGGCGGTGGCGGCGCCTAGGAATGGGAGTGTTG
TCGGGGAGGCGAGCGCGGGGAAGCAGTTTCAGCAGCGCGAGATGTTGGAC
CTCTGGTGGTTGACAGGCGAGTAGGGCGGGCTCGAGCAAGCCCTCGACTG
CTGCGACTGCCTCTCCGCCCCGCTCCGATTGGTGAGAATCCCGGTGGAGC
TCCTGCCGCCGCCGGCGCATTCCCCCCCGCGAAGCTCTTCCGCCAAGCAA
GAAGCCTCAATCGCCGCCCTATCTTCGTCGGCCAGACCACTCGAAGAAAG
CGCCGAGTATAATTCGCGCGGTCCTTTTTCTCCTGCTCCGCTCTCAAGCC
GACACAAGGAGAAGGAGGAGAAGAAGAAGAAGAAGCAGTTCGGGTTCGTG
GGGGTGACGCCGGAACCCGACAGTGGTTGGGGCGTGTCCAGAAAAAGGCC
TGGGCCTGGTGGCGTCGGAGGAGGACGAGGCGGGGACGAGAACTGTCCAG
AGCGCGGAAGAAGCGGAAGAGGCGGCGCGAGGGACGACGGCCTAGGTCGC
GAGGGGGGTTGTGGGTGGGAAGGTTGTACCGAGGGGGACGATGATCCGAG
AGAAGAAGGGGCGGCGGTGGCGGCGCCTAGGAATGGGAGTGTTGTCGGGG
AGGCGAGCGCGGGGAAGCAGTTTCAGCAGCGCGAGATGTTGGACCTCTGG
TGGTTGACAGGCGAGTAG back to top
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