mRNA_C-linearis_contig10.532.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.532.1

>prot_C-linearis_contig10.532.1 ID=prot_C-linearis_contig10.532.1|Name=mRNA_C-linearis_contig10.532.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=445bp
MPLRFVQVGSGEMLRVVTRGSLIVDFHRRNSDDVCEDARVVLTGVSAVEG
MGFNLLYLHALSETMAITIDPLGVHLLTNAVPPNGLTFPRNSSGASLYAT
RVQFTGTDFAASGVSSGSVYPHEPPPGDFPPDPSLLPFNGGGAGGGGAPS
VMLPSTGDAGVGPENAPGDMLSTCADVVPDVFGFSPIDDDDVVPWNNSSD
EPFCGAEGERFPPALVSVVPSTGIFPPTNTGVVTFLDGSVMQIPYTLEEL
RLVSGVLKIFSDEGDMEFVPSGNYGEYANGFLSDAGAALLLGAFAAIAPK
RRPFRVGPPTNAFEINHFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVP
CVLVKGARAHTSRAGGRASEPGVTYHLDLCGAVTASLCGCVYLLVVVDSF
SRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTE*
back to top

mRNA from alignment at C-linearis_contig10:2013925..2016156+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.532.1 ID=mRNA_C-linearis_contig10.532.1|Name=mRNA_C-linearis_contig10.532.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2232bp|location=Sequence derived from alignment at C-linearis_contig10:2013925..2016156+ (Chordaria linearis ClinC8C monoicous)
GTGCGCGGTGATGACATTCCTATGCCTCTGAGGTTCGTGCAAGTAGGGAG TGGTGAAATGCTGCGAGTTGTGACGAGAGGTAGCCTGATCGTTGACTTCC ACCGCCGAAATTCTGATGACGTATGCGAGGATGCGCGAGTGGTTTTGACT GGAGTGTCCGCCGTAGAGGGCATGGGATTCAATTTGCTTTATCTGCATGC ATTGTCTGAAACGATGGCAATCACGATCGACCCCCTTGGAGTGCACCTTC TCACCAATGCTGTACCCCCCAATGGGTTGACTTTCCCCCGGAATTCGTCC GGCGCGTCCTTGTATGCAACGCGTGTGCAATTCACCGGCACGGATTTCGC TGCCTCTGGTGTTTCTTCTGGTTCGGTTTACCCCCACGAACCCCCCCCCG GTGATTTTCCCCCCGACCCGTCGCTGCTGCCGTTCAATGGTGGTGGCGCC GGGGGTGGAGGGGCACCAAGTGTGATGCTTCCATCCACCGGCGATGCCGG CGTAGGGCCAGAAAATGCCCCCGGTGATATGCTTTCCACTTGCGCCGATG TAGTGCCTGACGTGTTTGGTTTCTCGCCCATCGATGACGACGATGTAGTG CCCTGGAATAACTCCTCTGACGAACCGTTTTGCGGTGCGGAAGGGGAGAG GTTTCCGCCCGCTCTCGTGAGCGTAGTACCTTCGACTGGCATTTTTCCGC CCACAAACACGGGTGTCGTGACCTTTCTTGACGGTAGTGTGATGCAAATC CCATACACGCTTGAGGAGTTGAGGCTTGTTTCTGGCGTGCTGAAGATTTT TTCGGATGAGGGGGACATGGAATTTGTGCCCAGCGGCAACTACGGCGAAT ACGCCAATGGCTTTTTGTCTGACGCAGGAGCTGCGCTTTTGTTGGGGGCT TTCGCTGCGATTGCCCCCAAACGTCGACCTTTCCGTGTTGGCCCGCCCAC TAACGCTTTCGAGATAAATCATTTCCACCGTTGCTCCGGCCACCTCTGCG AGTACCTGTTGAGGGAAACTGCTAAACAACAGGGTATCAAGCTCACGGGG AGGTTGGAGACGTGCGTGCCGTGCGTGTTGGTGAAGGGGGCGCGGGCTCA CACCTCGAGGGCTGGCGGACGAGCGAGCGAGCCGGGCGTTACGTACCACC TGGACCTCTGTGGCGCCGTGACCGCGTCGCTCTGTGGCTGTGTGTACTTA CTGGTGGTGGTGGACAGCTTCTCGAGGTTCATGCTCGCGTACGGCCTGCG GCGCAAGTCGGCTGCGCTCGACGGGTTCAAGGTGGCCATCACGGACCTCG CCAAGTACGGCCGCGGCGACATCCAGACTATCCGCGTCGACATGGGCACC GAGTAGACCTCCGACCCGTTCCGCATGTTCTGCGCCAATGCTGGAATCCG CATGGAGTTTACCGCCCCGAACACACCGCAGCAGAACGCCCCCGTCGAGA ATGCGATTTGGCGCTTGATGAAGGGCGGGACCGTGTGCCGCCGGAGCGCT GTCTTGGAGTTCGGCATCGACTACTCCGGCATCCCGAACATGGACTCCCG CGGGGATCGTCTCTGGTTGGAGTCGGTGCGATTTACGGCCGCGTGCTTTA ATCGCAGCGGCACCAAGGCCAACCCCGGCAATGTGTCGCCGTACGAGGCC TTCACGGGCACCAAGCCGGACGCCATCATCGTGCCGTTTCTGCAACCGCT CATTATGCGTAAGCAGAGGGTCACCAAGCTCGACGACCAGGGCGAGCCTG GGTACTACCTCGGCCAGAGCCACCAACACGGGCGTTCCACGGTGCGGGTG CTCAAGGTGTCTACCGGGCGGCCATGCCACAGCAGGGACATCGTGTTCAT CTCCGGCGCCGCCGCGTCTGCCGGGAAGGGGGGAGGAGCTGGCGCCATTG TTCCCGCCACGCAGCAGCGTCCGTCGTTCGGCCCAGCTCTGCCACCTCCA TCGCCAGCACCGCCGTATACGTCGCCGTCCAACATTGCGCCGCCGCCGCT CGCCACGCTTCCGCCTACGCCGTCCTCGCAATCGCTCACGCTGTTGCCGG GGGCCGCATGGCCGCCTGCGGGCTTGCCGCCTGCGACGCTGCCGCTTACT CCGCCCGTCACTCATGCCGCCCCCGCAGCCGCTTGCGCCGCTGCCTGGGG CCGCTGGGCCACGTGCGGGTTCGCCGATACCGGAGGAGACAACGCTCCCG CGCCCTGCGGGGGTGTTGCCGCCTCTACCCAG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig10:2013925..2016156+

>mRNA_C-linearis_contig10.532.1 ID=mRNA_C-linearis_contig10.532.1|Name=mRNA_C-linearis_contig10.532.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2670bp|location=Sequence derived from alignment at C-linearis_contig10:2013925..2016156+ (Chordaria linearis ClinC8C monoicous)
ATGCCTCTGAGGTTCGTGCAAGTAGGGAGTGGTGAAATGCTGCGAGTTGT
GACGAGAGGTAGCCTGATCGTTGACTTCCACCGCCGAAATTCTGATGACG
TATGCGAGGATGCGCGAGTGGTTTTGACTGGAGTGTCCGCCGTAGAGGGC
ATGGGATTCAATTTGCTTTATCTGCATGCATTGTCTGAAACGATGGCAAT
CACGATCGACCCCCTTGGAGTGCACCTTCTCACCAATGCTGTACCCCCCA
ATGGGTTGACTTTCCCCCGGAATTCGTCCGGCGCGTCCTTGTATGCAACG
CGTGTGCAATTCACCGGCACGGATTTCGCTGCCTCTGGTGTTTCTTCTGG
TTCGGTTTACCCCCACGAACCCCCCCCCGGTGATTTTCCCCCCGACCCGT
CGCTGCTGCCGTTCAATGGTGGTGGCGCCGGGGGTGGAGGGGCACCAAGT
GTGATGCTTCCATCCACCGGCGATGCCGGCGTAGGGCCAGAAAATGCCCC
CGGTGATATGCTTTCCACTTGCGCCGATGTAGTGCCTGACGTGTTTGGTT
TCTCGCCCATCGATGACGACGATGTAGTGCCCTGGAATAACTCCTCTGAC
GAACCGTTTTGCGGTGCGGAAGGGGAGAGGTTTCCGCCCGCTCTCGTGAG
CGTAGTACCTTCGACTGGCATTTTTCCGCCCACAAACACGGGTGTCGTGA
CCTTTCTTGACGGTAGTGTGATGCAAATCCCATACACGCTTGAGGAGTTG
AGGCTTGTTTCTGGCGTGCTGAAGATTTTTTCGGATGAGGGGGACATGGA
ATTTGTGCCCAGCGGCAACTACGGCGAATACGCCAATGGCTTTTTGTCTG
ACGCAGGAGCTGCGCTTTTGTTGGGGGCTTTCGCTGCGATTGCCCCCAAA
CGTCGACCTTTCCGTGTTGGCCCGCCCACTAACGCTTTCGAGATAAATCA
TTTCCACCGTTGCTCCGGCCACCTCTGCGAGTACCTGTTGAGGGAAACTG
CTAAACAACAGGGTATCAAGCTCACGGGGAGGTTGGAGACGTGCGTGCCG
TGCGTGTTGGTGAAGGGGGCGCGGGCTCACACCTCGAGGGCTGGCGGACG
AGCGAGCGAGCCGGGCGTTACGTACCACCTGGACCTCTGTGGCGCCGTGA
CCGCGTCGCTCTGTGGCTGTGTGTACTTACTGGTGGTGGTGGACAGCTTC
TCGAGGTTCATGCTCGCGTACGGCCTGCGGCGCAAGTCGGCTGCGCTCGA
CGGGTTCAAGGTGGCCATCACGGACCTCGCCAAGTACGGCCGCGGCGACA
TCCAGACTATCCGCGTCGACATGGGCACCGAGTAGATGCCTCTGAGGTTC
GTGCAAGTAGGGAGTGGTGAAATGCTGCGAGTTGTGACGAGAGGTAGCCT
GATCGTTGACTTCCACCGCCGAAATTCTGATGACGTATGCGAGGATGCGC
GAGTGGTTTTGACTGGAGTGTCCGCCGTAGAGGGCATGGGATTCAATTTG
CTTTATCTGCATGCATTGTCTGAAACGATGGCAATCACGATCGACCCCCT
TGGAGTGCACCTTCTCACCAATGCTGTACCCCCCAATGGGTTGACTTTCC
CCCGGAATTCGTCCGGCGCGTCCTTGTATGCAACGCGTGTGCAATTCACC
GGCACGGATTTCGCTGCCTCTGGTGTTTCTTCTGGTTCGGTTTACCCCCA
CGAACCCCCCCCCGGTGATTTTCCCCCCGACCCGTCGCTGCTGCCGTTCA
ATGGTGGTGGCGCCGGGGGTGGAGGGGCACCAAGTGTGATGCTTCCATCC
ACCGGCGATGCCGGCGTAGGGCCAGAAAATGCCCCCGGTGATATGCTTTC
CACTTGCGCCGATGTAGTGCCTGACGTGTTTGGTTTCTCGCCCATCGATG
ACGACGATGTAGTGCCCTGGAATAACTCCTCTGACGAACCGTTTTGCGGT
GCGGAAGGGGAGAGGTTTCCGCCCGCTCTCGTGAGCGTAGTACCTTCGAC
TGGCATTTTTCCGCCCACAAACACGGGTGTCGTGACCTTTCTTGACGGTA
GTGTGATGCAAATCCCATACACGCTTGAGGAGTTGAGGCTTGTTTCTGGC
GTGCTGAAGATTTTTTCGGATGAGGGGGACATGGAATTTGTGCCCAGCGG
CAACTACGGCGAATACGCCAATGGCTTTTTGTCTGACGCAGGAGCTGCGC
TTTTGTTGGGGGCTTTCGCTGCGATTGCCCCCAAACGTCGACCTTTCCGT
GTTGGCCCGCCCACTAACGCTTTCGAGATAAATCATTTCCACCGTTGCTC
CGGCCACCTCTGCGAGTACCTGTTGAGGGAAACTGCTAAACAACAGGGTA
TCAAGCTCACGGGGAGGTTGGAGACGTGCGTGCCGTGCGTGTTGGTGAAG
GGGGCGCGGGCTCACACCTCGAGGGCTGGCGGACGAGCGAGCGAGCCGGG
CGTTACGTACCACCTGGACCTCTGTGGCGCCGTGACCGCGTCGCTCTGTG
GCTGTGTGTACTTACTGGTGGTGGTGGACAGCTTCTCGAGGTTCATGCTC
GCGTACGGCCTGCGGCGCAAGTCGGCTGCGCTCGACGGGTTCAAGGTGGC
CATCACGGACCTCGCCAAGTACGGCCGCGGCGACATCCAGACTATCCGCG
TCGACATGGGCACCGAGTAG
back to top