mRNA_C-linearis_contig10.527.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.527.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI) HSP 1 Score: 1769 bits (4583), Expect = 0.000e+0 Identity = 1061/1842 (57.60%), Postives = 1162/1842 (63.08%), Query Frame = 3 Query: 192 MEPRPYQAEAFDAARKSNVVMVGATGVGKTLVSLMLIRDFYFEDSRRRESKNHKWCVFLCPTQELVFQQAKSAQIFTGVRCAPYVGRDLDYWGLGKWRQEMDSKEVLVMTPNALLNLLHRGTEYLTLSDVGVLVFDECHKARKKHPYARVMGFYLELSKQGAPLPKVFGMTASPTVECVEVLQSKAYVCDDDLIEEFQANAEWELLFYKVFSPSQTVVDELEALMRMLFSETMCGFGDSKEKFVDTVVGPVLFSYEHLGLWCAVRHIVVFAEGFLRSSLARNLPDRSRVHRTKKVVLQLVRQLLESPLGSVVSGVEPPAPITLPPGAAXXXXXXXXXXXXXXXXXXXXXXXXXXRPTTAATNXXXXXXXXXXXXXXXXXXXXXXSGDAVVDGGXXXXXXXXXXXXXXXXXSPDGRGSASXXXGGVAASVGLAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRGRRLRGGGYALSPIPSDNRLDDGRLDPMSEEDPEGGDGRLAAGHGGGGDQVTADGGRRAGEKDDGALPRPSVDGPAAATGPDPGAFGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTEGGEEASGAGGTAVNPGWGVTPGRITTLVKTLLRVSEEWGEEAKSFRCMVFVERRATARVLSEYLSHSLAGRFTTGFVVGRAKARGGVAPAAGGLADHDDFGRSRVAQTINMFRAGDVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMIEKGDNVERDRVALMLMESEDIKRFHLGHEKPSAMVPLRHSHPNMVHTIESSGAVVDMDMSTALMNQTLGSIGCDFHPLLIAEEKTSESFVYREKSFMCRLELPSFLGMATLDTAVELVSEHFWTKSQARSAVAFLGVLQMLEKGLINHNLNPVRTKERLGLRPHPRGARQGGPHQGQDAGAAPEVVTAAAXXXXXXXXXXXXSPFDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWAAARTRGCYENVPGPRRRMRVYCFPSPPGEVDGREXXXXXXXXXXXXXXXXX---RTFQPKLKVDXXXXXXKGVGPRLFVGLASAAPLPISASQASKLGIFDCFDVDLNPAQLAAVVQWHRETIGMAALYEIPPQMTQSPRNDPAKSPFRGDKGVLAVPVEYGDGGGGKTGAGAPRIDWAAVEAANAGVHLPDETDEHYTRRIMFSRVSHKTCRFYFILEKTTTTLEDYLRRCLESDQGPYAGLPCETITAHPAGCMGREKGVLAVGHGVRKPDYEAADKSQRLLLGVPAPALKHSFAQHLIRGERVMDPDAGVRGRVKVAKRPKTPEQEDGKTLTPTTGVPAESSTPADPTPKEPPAXXXXXXXXXXXRDAAANGNKPREKGCIEDXXXXXXXXXXGGLDGADGIVSMDESDDENRDAMAVDPPAAKAAAAGGAEAAVDGAIVPRMFDLERQLLCFVLHESLFLPALQTSLYHRPTNTPXXXXXXXTFGSTNNGRLLPVNERLETLGDAWLNYYAGFVVFQARDKMGLFCCSDKPVMVEEGLMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFEMWSPSLLPLPPAVKVSRKTVADVVEALLGAALVAGGNRSAAYLMEWLGLPTLESSNDSEKAAEHXXXXXXXXAAVYVTTKPSARLMGNIRRLEKRLGYTFRYPWLCIQAITHPSWTIDDFPAGTVPAHDYQRLEFLGDAVLGWMVTAHLYFASSSFTPAELTRIK--ASCVCNASLWVIALRLDVHNALRASPKILGNVHAFIENNSADGVGTPPKHPADVLEALIAAVFLDSSCCMN 5702
MEPRPYQAEAFDAARK+NVVMVGATGVGKTLVSLMLIRDFYFED+RRRESKNHKWC+FLCPTQELVFQQAKSAQIFTGVRC PYVG+DLDYWG+ KW++EMD+KEVLVMTPNALLNLLHRG EYL+L DVGVLVFDECHKARKKHPYARVM FYLEL K PLPKVFGMTASPT+ECVEVLQ KAYVC+DDLIEEFQANA+WELL Y + VVGPVLFSY+HLGLWCA+RHI V A NLPDRSR+ RTKKVVLQL + L ESPLG V G+E AP + P DGRG++ G + + R S G R GG AL P+ G D EED E E++ L DG A GG ASG G GWG+TPGR+ TLVKTLLRVSE+WG+EAK+FRCMVFVERRATARVLS +LSHSL+GRF GFVVGRA ARG DDFGRSR+AQTINMFRAG+VQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIM+E GD++ERDRV+LMLMESEDIKRF LGHEK S VPLRHSHPNMVH IESSGAVVDMDM+T LMNQ L ++GCDFHPLLI CRLELPSF+GM T+DTA+ L EHFW+KSQARSAV+FL V+QMLEKG I+ LNP R K LRP G +G PHQGQD +PE A PF G+ W ARTRGCYE+ PGP+RRMRVYCF + E + XXXXXXX R+F PKLKVD KG+GPRLFVGLASAAPLP++ASQA+K+GI D FDVDLNPAQ+AA+VQWH+ET+GMAALYEIP QM Q+P NDPAKSPFR VLAVPV+YGD G G G +IDW A+EAANAGVHLPD+TDE TTTTLE YLRRCLESDQGPYAGLPCETIT H AG MGR KGVLAVGHGVRKPDY+AADKSQRLLLGVPAPALKHSFAQHL+RGE+VMDPDAGVR RVKV KRP ED + GV + P+E DAA + XXXXXXXXXX + V+ PAA + +A G E AV+ AIVPRMFDLERQLLCFVLHESLFLPALQTSLYHR N P ++N +LLPVNERLETLGDAWLNYYAGFVVFQ DKPV++EEG+MTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPF+MWSPSLLPLPP VK S+KT+ADVVEALLGAALVAGGNRSAAY+MEWLGL E VYV TKPSARLMGNIR LEKRLGYTFRYPWLC+QAITHPSWTI+D P GTVPA DYQRLEFLGDAVLGWMVTAHLYFASS+FTPAELTRIK +SCVCNASLWVIALRLDVH+ LRASPKILG++HAFIENN G GT PKHPADVLEALI AVF+DSSCCMN
Sbjct: 1 MEPRPYQAEAFDAARKANVVMVGATGVGKTLVSLMLIRDFYFEDARRRESKNHKWCIFLCPTQELVFQQAKSAQIFTGVRCGPYVGKDLDYWGVKKWKEEMDNKEVLVMTPNALLNLLHRGNEYLSLKDVGVLVFDECHKARKKHPYARVMAFYLELRKNRGPLPKVFGMTASPTIECVEVLQCKAYVCEDDLIEEFQANADWELLSY------------------------------------EAVVGPVLFSYQHLGLWCAMRHIRV----------AENLPDRSRITRTKKVVLQLTQHLTESPLGLAVCGIER-APRSSSPAVPGI----------------------------------------------------------------------------------DGRGASKGVCDG---GLPVPRRG-----------------------------------------------------GSAGGRRADGGVALRPLA-------GTPDDPMEEDGE--------------------------EREXXXL-----DGVEAQN-----------------------------------------KGGGSAASGVGAA----GWGMTPGRVITLVKTLLRVSEQWGDEAKNFRCMVFVERRATARVLSAFLSHSLSGRFCCGFVVGRANARG------------DDFGRSRMAQTINMFRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEDGDDMERDRVSLMLMESEDIKRFQLGHEKASVRVPLRHSHPNMVHHIESSGAVVDMDMATPLMNQALSAVGCDFHPLLI-----------------CRLELPSFMGMPTIDTAM-LADEHFWSKSQARSAVSFLAVVQMLEKGYIDKRLNPTRGKAAW-LRPRSGGG-EGSPHQGQDEAKSPE-----ADAPSETAATAGSPPFPGAFGDGSQGEGDVQPGGPGAPGIGPAAAGAGFAVWEGARTRGCYEDDPGPKRRMRVYCFRTSAKEGEXXXXXXXXXXEVLVEEEEHEADMRSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTASQAAKVGIVDSFDVDLNPAQMAAIVQWHKETVGMAALYEIPHQMMQTPLNDPAKSPFR--VSVLAVPVDYGDDG--PAGDGVVKIDWPAIEAANAGVHLPDKTDE------------------------TTTTLEIYLRRCLESDQGPYAGLPCETITPHDAGRMGRVKGVLAVGHGVRKPDYDAADKSQRLLLGVPAPALKHSFAQHLVRGEKVMDPDAGVRSRVKV-KRPSKKSLEDDGQVDGAMGVTEKGED----NPEE------RGDAPSPAADAAGTEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVVE-----APVERPAASSESAAG-EMAVEAAIVPRMFDLERQLLCFVLHESLFLPALQTSLYHR--NPPGAD-------KSSNDKLLPVNERLETLGDAWLNYYAGFVVFQ-----------DKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLAAASXXXXXXXXGEDPAAPPLPE--VYVATKPSARLMGNIRLLEKRLGYTFRYPWLCMQAITHPSWTINDIPPGTVPAQDYQRLEFLGDAVLGWMVTAHLYFASSAFTPAELTRIKVTSSCVCNASLWVIALRLDVHHVLRASPKILGHIHAFIENNGVSGTGTAPKHPADVLEALIGAVFIDSSCCMN 1470
BLAST of mRNA_C-linearis_contig10.527.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE) HSP 1 Score: 1044 bits (2700), Expect = 0.000e+0 Identity = 893/2048 (43.60%), Postives = 1008/2048 (49.22%), Query Frame = 3 Query: 687 KVFGMTASPTVECVEVLQSKAYVCDDDLIEEFQANAEWELLFYKVFSPSQTVVDELEALMRMLFSETMCGFGDSKEKFVDTVVGPVLFSYEHLGLWCAVRHIVVFAEGFLRSSLARNLPDRSRVHRTKKVVLQLVRQLLESPLGSVVSGVEPPAP----ITLPPGAAXXXXXXXXXXXXXXXXXXXXXXXXXXRPTTAATNXXXXXXXXXXXXXXXXXXXXXXSGDAVVDGGXXXXXXXXXXXXXXXXXSPDGRGSASXXXGGVAASVGLAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRGRRLRGGGYALSPIPSDNRLDDGRLDPMSEEDPEGGDGRLAAGHGGGGDQVT-------------------------ADGGRR---------AGEKDDGALPRPSVDGPAAATGPDPGAFGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTEGGEEASGAGGTAVNPG--------------WGVTPGRITTLVKTLLRVSEEWGEEAKSFRCMV---------------------------------------------------------------------------------------------------------------------------FVERRATARVLSEYLSHSLAGRFTTGFVVGRAKARGGVAPAAG-GLADHDDFGRSRVAQTINMFRAGDVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMIEKGDNVERDRVALMLMESEDIKRFHLGHEKPSAMVPLRHSHPNMVHTIESSGAVVDMDMSTALMNQTLGSIGCDFHPLLIAEEKTSE------SFVYREKSFMCRLELPSFLGMATLDTAVELVSEHFWTKSQARSAVAFLGVLQMLEKGLINHNLNPVRTKERLGLR---------------------PHPRGARQGG-PHQGQDAGAAPEVVTAAAXXXXXXXXXXXXS-------------------------PFDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWAAARTRGCYENVPGPRRRMRVYCFPSPPGE-----------------VDGREXXXXXXXXXXXXXXXXX----------------------------RTFQPKLKVDXXXXXXKGVGPRLFVGLASAAPLPISASQASKLGIFDCFDVDLNPAQLAAVVQWHRETIGMAALYEIPPQMTQSPRNDPAKSPFR------------------------------------------------GDKGVLAVPVEYGDGGGGKTGAGAPRIDWAAVEAANAGVHLPDETDEHYTRRIMFSRV----------------------SHKTCRFYFILEKTTTTLEDYLRRCLESDQGPYAGLPCETITAHPAGCMGREKGVLAVGHGVRKPDYEAADKSQRLLLGVPAPALKHSFAQHLIRGERVMDPDAGVRGRVKVAKRPKTPE-----QEDGKTLTPTTGVPAESSTPADPTPKEPP--------------------------------------------------------------------------AXXXXXXXXXXXRDAAANGNKP--------REKGCIEDXXXXXXXXXXGGLDGADGIVSMD-----------------------------------------------------------------------ESDDEN-------RDAMAVD--PP----------AAKAAAAGGAEAAVDGAIVPRMFDLERQLLCF----------------------VLHESLFLPALQTSLYHRPT-----NTPXXXXXXXTFGSTNNGRLLPVNERLETLGDAWLNYYAGFVVFQARDKMGLFCCSDKPVMVEEGLMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFEMWSPSLLPLPPAVKVSRKTVADVVEALLGAALVAGGNRSAAYLMEWLGLPTLESSNDSEKAAEH 5186
K+FGMTASPT+ECVEVLQ KAYVC+DDLIEEFQANA+WELL Y+VF+PSQTVVDELE+LMRMLFSE+MCGFGDSKEKFV+ VVGPVLFSY+HLGLWCA+RHIV+F E A NLPDRSR+ RTKKVVLQL + L ESPLG V G+E AP + +P ++ XXXXXXXXXXXXXXXXXXXX XXXXXX XXXXXXXXXXXXX+ V DG DG +A+ G A G A + XXXXXXXXXXX S G L GG AL+P DD PM E++ E R G GG Q +GGR G++DDGA R S +AT F G XXXXXXXXXXXXXXXXXXX AG+ G + A G+ WG+TPGR+ TLVKTLLRVSE+WG+EAK+FR F++R+ A+ + + A G G A G A G GLA+ DDFGRSR+AQTINMFRAG+VQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIM+E GD+ ERDRV+LMLMESEDIKRF LGHEK S VPLRHSHPNMVH IESSGAVVDMDM+T LMNQ L ++GCDFHPLLIAEEK+ + +YRE SF CRLELPSF+GM T+DTAV LV EHFW+KSQAR+AV+FL V+QMLEKG I+ LNP RTK+RL + P PR G P G + AA AA XXXX P + XXXXXXXXXXXXXXXXXXX W ARTRGCYE+ PGP+RRMRVYCF SP GE +DG E R+F PKLKVD KG+GPRLFVGLASAAPLP++A+QA+K+GI D FDVDLNP Q+AA+VQWH+ET+GMAALYEIP QMTQ+P NDPAKSPFR GDKGVLAVPV+YGD G G G +IDW A+EAANAGVHLPD+TDE YTRRI+FSRV SHKTCRFYFILE+TTTTLE YLRRCLESDQGPYAGLPCETIT+H AG MGR KGVLAVGHGVRKPDY+AADKSQRLLLGVPAPALKHSFAQHL+RGE+VMDPDAGVR RVKV E +E G +P D KE A + +P + C G A G+ + D ESD+ DA A D PP A GG+ D P ++ + E+ Q + N T + PVNERLETLGDAWLNYYAGFV DKPV++EEG+MTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPF+MWSPSLLPLPP VK S+KT+ADVVEALLGAALVAGGNRSAAY+MEWLGLPTLESSND EKA E+
Sbjct: 6 KIFGMTASPTIECVEVLQCKAYVCEDDLIEEFQANADWELLSYEVFTPSQTVVDELESLMRMLFSESMCGFGDSKEKFVEAVVGPVLFSYQHLGLWCAIRHIVMFCE-------AENLPDRSRITRTKKVVLQLTQHLTESPLGLAVCGIER-APRSSSLAVPLDSSGQPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMLXXXXXXXXXXXXXASKGVCDG--------------------DGA-AANGGDGVTVAEYGNAVKPAVAAAAAXXXXXXXXXXXRQG--------------------------------GSAGSGLPGGKVALNP--QGGAPDD----PMEEDEEE----REGKGFGGIEAQNKXXXXXXXXXXXXXXSEXXXXXXXGDGEGGREERKGQEVGGTGQRDDGA--RSSA---GSAT------FSAGAXXXXXXXXXXXXXXXXXXXAH-------AGSVGEQAAGGSXXXXXXXXXXXXXXXXXXXXAEWGMTPGRVITLVKTLLRVSEQWGDEAKNFRWAAPTLEALPSMAAALNAMPRPTARPRSSGDRCPTTSLRKAKXXXXXXXXXXXXXXXXXXXXXGEEKSEEVKGKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSEECNEEDLYFGVGGFMDRQRRAKAAAAXXGEAAASPAKAGLSGG---AEGEAAVEVGEGLAEGDDFGRSRMAQTINMFRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEDGDDRERDRVSLMLMESEDIKRFQLGHEKASVRVPLRHSHPNMVHHIESSGAVVDMDMATPLMNQALSAVGCDFHPLLIAEEKSGPCEAPFGAMMYREPSFKCRLELPSFMGMPTIDTAV-LVDEHFWSKSQARAAVSFLAVVQMLEKGYIDERLNPTRTKDRLVVEKRRGYDPVLVEGKEARMKAKMPIPRPVAMGILPTPGVEFDAAWMAAWMAADGNGASNEXXXXXXXXXXXXXXXXXXXXXXTAATAGSPPSTCAVGDGSEGGXXXXXXXXXXXXXXXXXXXAGFAVWEGARTRGCYEDDPGPKRRMRVYCFRSPAGEAEGWVPTLKRVRKRRSELDGSEKILEEEEDEVQGEDRAAAKEGXXXXXXXXXXXEVLVEEEEHEADIRSFHPKLKVDLGRGPGKGLGPRLFVGLASAAPLPLTAAQAAKVGIVDSFDVDLNPVQMAAIVQWHKETVGMAALYEIPHQMTQTPLNDPAKSPFRAGGSELPERARCSGRGAHTDTGDNLQTCSLVCLRLQQTRASLKETGVEGDKGVLAVPVDYGDDG--PAGDGVVKIDWPAIEAANAGVHLPDKTDEQYTRRILFSRVGKSSFAGRSLLVGKRFLGKAEVSHKTCRFYFILERTTTTLEVYLRRCLESDQGPYAGLPCETITSHDAGRMGRVKGVLAVGHGVRKPDYDAADKSQRLLLGVPAPALKHSFAQHLVRGEKVMDPDAGVRSRVKVDGAMGVTEKGENLEEPGDAPSPAADAAGTEQQGVDAEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEARGWAGVSTLKLNNHKVGPGQPVLLVEQYCQPVCCTRRVFISVLHASSGQAVSAQGLAASDAAPAPSESSQLLRLSPSGAAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGADAVAESDEAGGLLSVPEHDAAAADAWPPCGTWCIPGEGAGTXXXPGGSGCNADKPEEPSALGAPSGIMSAPGNGLGPVSGDSATRGGKGAGKIGVEAAXXXXAQAAARAAAVGVIKWNGGEEGAVTDTMALLDCSLRRPVNERLETLGDAWLNYYAGFV--------------DKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSLLPLPPPVKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLPTLESSNDPEKAKEY 1944
BLAST of mRNA_C-linearis_contig10.527.1 vs. uniprot
Match: A0A2S1PRV6_FUCSE (Putative dicer (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRV6_FUCSE) HSP 1 Score: 658 bits (1698), Expect = 2.480e-206 Identity = 457/1153 (39.64%), Postives = 562/1153 (48.74%), Query Frame = 3 Query: 2418 IDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMIEKGDNVERDRVALMLMESEDIKRFHLGHEKPSAMVPLRHSHPNMVHTIESSGAVVDMDMSTALMNQTLGSIGCDFHPLLIAEEKTSESFVYREKSFMCRLELPSFLGMATLDTAVELVSEHFWTKSQARSAVAFLGVLQMLEKGLINHNLNPVRTKERL-----------------------------------GLRPHP------------------------RGAR-------QGG----PHQ----GQDAGAAPEVVTAAAXXXXXXXXXXXXSPFDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWA---AARTRGCYENVPGPRRRMRVYCFPSPP----------------------------GEVDG----------------REXXXXXXXXXXXXXXXXXRTFQPKLKVDXXXXXXKGVGPRLFVGLASAAPLPISASQASKLGIFDCFDVDLNPAQLAAVVQWHRETIGMAALYEIPPQMTQSPRNDPAKSPFR-----GDKGVLAVPVEYGDGGGGKTGAGAPRIDWAAVEAANAGVHLPD-ETDEHYTRRIMFSRVSHKTCRFYFILEKTTTTLEDYLRRCLESDQGPYAGLPCETITAHPAGCMGREKGVLAVGHGVRKPDYEAADKSQRLLLGVPAPALKHSFAQHLIRGERVMDPDAGVRGRVKVAKRPKTPEQEDGKTLTPTTGVPAESSTPADPTPKEPPAXXXXXXXXXXXRDAAANGNKPREKGCIEDXXXXXXXXXXGG--LDGADGIVSMDESD---DENRDAMAVDPPAAKAAAAGGAEAAVDGAIVPRMFDLERQLLCFVLHESLFLPALQTSLYHR---------------------------------------------------------------------------------------PTNTPXXXXXXXTFGSTNN--------------------GRLL-----------------------------------------------PVNERLETLGDAWLNYYAGFVVFQARDKMGLFCCSDKPVMVEEGLMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFEMWSPSLLP 5018
IDVPECNLV++MDKIK SRSLIHTRGRARSKGGKFVIM+E D ER+R+ +L ESE+IK+F LG EKPS VPLR +HPNMVH IE SGAVVDMDM+T L+ +TL + GCDF PLL+ E+ + SF CRLELPSFL M T+DT + E F TKS+ARSA +L +L+MLEKG ++ LNP + +RL G+ P P RG QGG P GQ A E AAA S + A A A R RGCYE VPGP+RRMRVYCF SPP G+V+G +E TF PKL VD KG+GPRL+VGLASAAPLP++A+QA K+GI D FDVDLNPAQLA++VQWHRET+GM ALY+IP Q+T++P+ DP K PFR GDKG++AVPVE+ + G G GAPRIDW A+EAANAG+ P +TDE Y RRI+F+R SHKTCRFYF+LE+T+TTL+DYL+R LES+ P AG+P TI+ HPA G +G LAV G+ + DY+AA KSQRLLLGVP PAL+HSF QHL+RGERVMDPDAGVR RV +++R + + P +P + +T +P +D GG ++G G+ ++ + R + ++ +V IVPRMFDLERQLLCFVLHE++FLPALQ SL+HR P +TP + N GR + P+NERLETLGDAWLN+YAGFV+FQ DKPVM EEG+MT LRKN+VSNARL+KCADGRGLREF+YPPR+ILG+PFEMW+PSLLP
Sbjct: 1 IDVPECNLVIAMDKIKNSRSLIHTRGRARSKGGKFVIMVEDQDQAERERILQILRESENIKKFQLGSEKPSLRVPLRQAHPNMVHRIERSGAVVDMDMATCLLFETLSTTGCDFQPLLVVEDSIQPA------SFKCRLELPSFLDMGTIDTD-SIPGERFSTKSEARSAACYLALLKMLEKGYLDERLNPSQKSDRLAVENRKTFDPVVPLEVEVRESREKATLPVPRPIAMGILPTPAVDVEQARLAAWEKHAKRFLPDAERGKSAMQEKGFQGGVDVIPFDDVVVGQGVATAAEARAAAAGGAVAFRASVIASSGGRATNVGTEESTDREKCVSSASESAPPMTTGDDSAAAWEDAKRPRGCYEGVPGPKRRMRVYCFRSPPRELNAWVPSSNEPRTRRATAGDYKRSASGKVEGEDESGGAKGVEDDETLKEEPAEEDGGDGGDDEANFPTFNPKLGVDVGQGPGKGLGPRLYVGLASAAPLPLTATQADKVGIEDSFDVDLNPAQLASIVQWHRETLGMVALYKIPHQLTRTPQMDPEKCPFRDAGEVGDKGIVAVPVEFVETSAG--GGGAPRIDWVAIEAANAGMMPPSSDTDEEYARRILFARTSHKTCRFYFVLERTSTTLDDYLQRRLESNMKPGAGVPYGTISHHPACKYGYARGSLAVVRGIHEHDYKAACKSQRLLLGVPVPALRHSFVQHLMRGERVMDPDAGVRRRVLLSQRAGSEK--------PGASIPEDEAT------NKPEGAPDDNGVYREGYGVHTVHEVDETNEAEDDRDDGGGRKRAGGESIEGWAGVSTLKSNKHGVQTTRAVLLLEQYTQVVCMTRQVFVSVMH-IVPRMFDLERQLLCFVLHEAVFLPALQASLWHRCPLLPPNASDDSDQTGTKADESPGTKADASSSGIQLILDDASIGDGSATSMTSLPPAQTSGGVIGASLESDPTRWDRNLSADATEAPPASTPADDSTVPSGAEAINWPPNGVWNAPGGGVGIAYGPGRTMTSDHGGDLGRGEEAKVEIAAVGAVQWQGGSEGSVADTLSLLDCSLRRPINERLETLGDAWLNFYAGFVIFQ-----------DKPVMREEGMMTFLRKNIVSNARLVKCADGRGLREFIYPPRTILGQPFEMWAPSLLP 1118
BLAST of mRNA_C-linearis_contig10.527.1 vs. uniprot
Match: A0A835Z3Y3_9STRA (Ribonuclease III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y3_9STRA) HSP 1 Score: 201 bits (511), Expect = 8.500e-52 Identity = 138/383 (36.03%), Postives = 193/383 (50.39%), Query Frame = 3 Query: 4743 PVNERLETLGDAWLNYYAGFVVFQARDKMGLFCCSDKPVMVEEGLMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPF-EMWSPSLLPLP-PAVKVSRKTVADVVEALLGAALVAGGNRSAAYLMEWLGLPTLESSNDSEKAAEHXXXXXXXXAAVYVTT---------------------------------KPSARLMGNIRRLEKRLGYTFRYPWLCIQAITHPS---------WTIDDFPAGTVPAHDYQRLEFLGDAVLGWMVTAHLYFASSSF---TPAELTRIKASCVCNASLWVIALR-LDVHNALRASPKILGNVHAFIENNSADGVGTPPKHPADVLEALIAAVFLDSSCCMNTVSQVFWPPIAQYLQ 5747
P NERLETLGDAWL Y M LF +P++ EEGL++ R N+V NARL K A L +M+P RS+LGRPF E W P+L+ P P +V KT AD VEA+LG L+ GG + ++ ++GLPTL + E A A VTT +P+A + ++ LE+ LGYTF WL +QA+TH S W D G++PA DYQRLE LGDA+L ++ TA L+ + TP +T+ A+CVCN++L + R L++ + L V + ++ S PK AD EAL+AAV++D+ M VS++FWP + Y +
Sbjct: 60 PANERLETLGDAWLKAY-----------MCLFIMQTRPILQEEGLISEFRSNLVCNARLTKEAVKCDLVSYMHPLRSMLGRPFLEHWMPALMAPPSPGPQVGWKTPADCVEAILGCCLILGGEAAPQAMLRFVGLPTLSNYVTPETGAAISALTLEQAVAKAVTTGLRGWGLGGGGELVAQLQSLPPGSFFDVEFIGTEPAAATVQSLHSLERSLGYTFTNKWLPLQAVTHASSTAGEQGRTWPTSD--GGSIPARDYQRLELLGDALLSYLTTAKLFLHEEEYGTTTPFIITKKVAACVCNSALASVGTRKLNLQHHLSV-------VEGYFKDLSEGTARDAPKALADAFEALVAAVYMDAGFDMAAVSRIFWPLLEGYAR 422
BLAST of mRNA_C-linearis_contig10.527.1 vs. uniprot
Match: A0A507D712_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D712_9FUNG) HSP 1 Score: 150 bits (379), Expect = 2.040e-33 Identity = 102/294 (34.69%), Postives = 156/294 (53.06%), Query Frame = 3 Query: 192 MEPRPYQAEAFDAARKSNVVMVGATGVGKTLVSLMLIRDFYFEDSRRRESKNHKWCVFLCPTQELVFQQAKSAQIFTGVRCAPYVGR-DLDYWGLGKWRQEMDSKEVLVMTPNALLNLLHRGTEYLTLSDVGVLVFDECHKARKKHPYARVM-GFYLELSKQGAPLPKVFGMTASP------TVECVEVLQS----KAYVCDDDL-IEEFQANAEWELLFYKVFSPSQTVVDELEALMRMLFSETMCGFGDSKEKFVDTVVGPVLFSYEHLGLWCAVRHIVVFAEGFLRSSLAR 1034
M+PR YQ E F+ A+ N + V TG GKTL++ +LI+ Y +D R + + CVFL PT LV QQAK Q TG++ +VG D+D+W KW +E+ + +V+ MTP LN+L T Y+ L+ VG+LVFDECH ARKK PY+ +M +Y ++++ PL + GMTASP T E + LQ+ A L +E+ A+ + +F F+PS LM L + + K ++ ++ VL++ E +G W A + + ++ R
Sbjct: 1 MQPRSYQVELFERAKSGNTIAVLETGTGKTLIACLLIKHVYDQD--RNSGISGRLCVFLAPTVILVDQQAKYIQEKTGLKVRQFVGSMDVDHWNEDKWAKELTTADVVAMTPQIFLNIL--STNYINLTQVGLLVFDECHHARKKSPYSLIMKDYYSKMNEAERPL--LLGMTASPVFSKKSTEESIWNLQNLLFATAVTATSRLEVEKHAPKAKEKTVF---FAPSPDY--GWTPLMHGLRDRNLI-----RHKTIEAILNNVLYTLEKIGRWAAEKELKKLLSAYIHKVARR 278
BLAST of mRNA_C-linearis_contig10.527.1 vs. uniprot
Match: A0A8K1CKT3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKT3_PYTOL) HSP 1 Score: 150 bits (380), Expect = 2.080e-33 Identity = 101/310 (32.58%), Postives = 149/310 (48.06%), Query Frame = 3 Query: 201 RPYQAEAFDAARKSNVVMVGATGVGKTLVSLMLIRDFYFEDSRRRESKNHKWCVFLCPTQELVFQQAKSAQIFTGVRCAPYVGRDLDYWGLGKWRQEMDSKEVLVMTPNALLNLLHRGTEYLTLSDVGVLVFDECHKARKKHPYARVMGFYLELSKQG---APLPKVFGMTASPTVECVEVLQSKAYVCD---DDLIE----------------------------EFQANAEWELLFYK--VFSPSQTVVDELEA---LMRMLFSETMCGFGDS--KEKFVDTVVGPVLFSYEHLGLWCAVRHIVVFAE 1007
RP+Q + + AR NVVMVGATG+GKT V++ L+ + + +R F+ PT++LV+Q A + + +R Y G + + W KW++E+ VLV TP + NLL + Y+T+ + VLVFDECH K+HPYA+V Y + G A LP++FG TA PT C L ++ + D DD+ E + EWE + VF Q +DEL+A L R+L + D +EK V V + Y++LGLWC + I + E
Sbjct: 12 RPFQTQVLELARDENVVMVGATGIGKTFVAIALLSELDYAGGKR--------AFFMAPTRQLVWQIAAKIRQLSTLRVNAYTGGETELWDARKWQRELALYRVLVCTPEVVRNLLEKA--YVTMDQINVLVFDECHHVTKRHPYAQVAKMYTLARESGGDPADLPRIFGATACPTEHCASTLHARLHHTDLDEDDMFEYAAMAPVVYETYAKEEEPSSEDIARVQGDVMTEEEWEAQSRRGTVFEKLQHELDELKAIPVLDRLLQKSSKLAATDRAHREKLVRRFVLSCVEVYKNLGLWCFYKCIELEVE 311
BLAST of mRNA_C-linearis_contig10.527.1 vs. uniprot
Match: A0A4D9CT29_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT29_9STRA) HSP 1 Score: 151 bits (382), Expect = 8.470e-33 Identity = 312/1391 (22.43%), Postives = 492/1391 (35.37%), Query Frame = 3 Query: 2097 RITTLVKTLLRVSEEWGEEAKSFRCMVFVERRATARVLSEYLS--HSLAGRFTTGFVVGRAKARGGVAPAAGGLADHDDFGRSR-VAQTINMFRAGDVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARS-KGGKFVIMIEKGDNVER-----DRVALMLMESEDIKRFHLGHEKPSAMVPLRHSHPNMVHTIESSGAVVDMDMSTALMNQTLG-SIGCDFHPLLIAEEKTSESFVYREK-SFMCRLELPSFLGMATLDTAVELVSEHFWTKSQARSAVAFLGVLQMLEKGLINHNLNPVR--------------------TKERLGLRPHPRGARQGGPHQGQDAGAAPEVVTAAAXXXXXXXXXXXXSPFDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWAAARTRGCYENVPG---PRRRMRVYCFPSPPGEVDG---------REXXXXXXXXXXXXXXXXXRTFQPKLKVDXXXXXXKGVGPRLFVGLASAAPLPISASQASKLGIFDCFDVDLNPAQLAAVVQWHRETIGMAALYEIPPQMTQSPRNDPAKSPFRG----------------------------------------------DKGVLAVPVEYGDGGGGKTGAGAPRIDWAAVEAANAGVHLPDETDEHYTRRIMFSRVSHKTCRFYFILEKTTTTLEDYLRRCLESDQGPYAGLPCETITAHPAGCMGREKGVLAVGHGVRKPDYEAADKSQRLLLGVPAPALKH-SFAQHLIRGERVMDP-DAGVRGRVKVAKRPKTPEQEDGKTLTPTTGVPAESSTPADPTPKEPPAXXXXXXXXXXXRDAAANGNK---------PRE--KGC--------IEDXXXXXXXXXXGGLDGADGIVSMDESDD-ENRDAMAVDPPAAKAAAAGGAEAAVD---------GAIVPRMFDLERQLLCFVLHESLFLPALQTSLYHRPTNTPXXXXXXXTFGSTNNGRLLPVNERLETLGDAWLNYYAGFVVFQARDKMGLFCCSDKPVMVEEGLMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFEMWSPSLL-PLPP-AVKVSRKTVADVVEALLGAALVAGGNRSAAYLMEWLGLPTLESSNDSEKAAEHXXXXXXXXAAVYVT------------------------------------------TKPSARLMGNIRRLEKRLGYTFRYPWLCIQAITHPSWT-----IDDFPAGTVPAHDYQRLEFLGDAVLGWMVTAHLYFASSSFTPAELTRIKASCVCNASLWVIALR-LDVHNALRASPKILGNVHAFIENNS---ADGV--------GTPPKHPADVLEALIAAVFLDSSCCMNTVSQVFWP 5726
R+ L++ L E W ++ ++FR +VFV+RR T RVL E+L+ S AG GFV+G+A A G FG R + I F +G ++ILV TD SEGIDVP+C+LVV+ D + S + + RGRAR GG FV+ +E+ A+ + +D++ +L + S HS P + + ++GA + ++ S +L+NQ + C + LL E SE V RE F C L LP G+ + S F K AR+ A+ ++ G ++ + NPVR ERL ++ GP +A A +A G+ + ++ GC + P +R S P + + + F P L++D KG + ++ GI D++ P + +Q + MA+ + Q QS DPA+ + DKG + VP++ IDW V+ T +R ++ R + + + D L C P P + + + + A+ + ++L+ A+ + S + G+ M D G+ G + R K +D ++ E + + PA R A + + P E C +E DG D++DD E R M + + + A + A +P+++ LE L L + + +P +S+ P ERLE LGD +L + VV + P ++ E L+ R N+ N RL++ A RGL + ++ P+ W+PSL+ PL A +V+ K +ADVVEAL+GA L+ GG R+A + WLGLP + + ++ AA + KP+ L+ + +LEK LGYTFR WL +QA+THPS + + TV DYQR EFLGDA+L MV + + +S P L K V N L AL L +H + L N++ A G+ G+ PK ADVLEALIAAVF+D++ + + ++F P
Sbjct: 383 RVEKLIQCL---HERWQQDRENFRALVFVQRRTTCRVLYEFLNIWDSFAG--LCGFVIGQASASG-----------LTTFGLKRKYKRAIEEFASGKLKILVATDVLSEGIDVPDCSLVVAFDTVANSTAFVQMRGRARQHNGGAFVLFASDQGGLEKLFDLEQGAAIFEKDVDDMEMSYLERKDMS----FAHSFPQFSYAVPATGATITLNNSISLLNQLCQWNKDCVSYQLLPTVEY-SERVVSREGVMFKCLLTLPDVFGLPVFE------SSFFPAKLIARAVAAYHACIEFHRCGFVDDDFNPVRESLQLEAYEHFVPEFYGSQVVNERLEIKTQAFAHFGVGPVLEHEASAELSTDMSAGSAKTSLEVDTGKRVNSGTTRVATDAANALGLTLLSGKTDRANHY-----VYRLSKDAGCVGFITDTLLPESSLREEDLSSTPAQAEQLSVTEVQLLAQCHVAMLFFVIHGASAFNIEFGPILQID------KGCNSLGTCDETRQTGEKTPPAGGAEKGI----DINNEPCDGSDGLQPDVDC-DMASKDKDGRQYPQSCSTDPARGKYEDAREYLISQTHLEQSRRKRSGRCTGIDEVEGHGKDWFAKCMMPKAAWDKGYVLVPIKPNG-----------EIDWLLVKTL---------TQSSPSRHLVHGRGDYWPLPSF----DAASIHNDLLLTCSPLTGRPKLWGPIQIVEQKTLAEERKARAAXXXXXXXXXXQATASARKKKLVEEDKDRAVGNPSGFEMSAAGQNTMPAVDNGLPGNIDQGSRKKLKCGQDRDIIS------LEREGCSQDEVENGPAVNDVSRGDAVERRAKQSDDLLPHLHLSEYPAEIWDRCDQQQPLILVEKILDSSYLFRALSRDG-----KCDKNDDNEPRSEMQRNTISRRRLVAPQLCTLIKIPRSLYEACQAALPQVWRLEIALKVESLVQGVEIPVKDSSIIREAICKPDY-------------------ERLEVLGDIYLKWVMTCVVLRKE-----------PYLLRESLLHDFRCNLTCNRRLVRAALQRGLEGHIVLRAKVVNEPYRHWAPSLMAPLAASASEVNVKVIADVVEALIGAYLLDGGPRAADAFLRWLGLPVMCERDVCQQQRSSMPGLSDAPAAFFTAGPPPRDREKLQKAYWPLLQRCCQCWKEDNLANTPQNIHPKAVPKPATDLVLKVTKLEKFLGYTFRNKWLALQALTHPSHSQKHRRSEKGQGHTVFISDYQRFEFLGDALLDLMVMVQILYENSDLPPKPLHVEKGVTVSNEHLARRALEWLQLHRFYDSDSIELNRCVETYANDAIAFAQGIDEWNPSKNGSGPKALADVLEALIAAVFIDTAGNIEHLVEIFLP 1665
BLAST of mRNA_C-linearis_contig10.527.1 vs. uniprot
Match: A0A507D391_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D391_9FUNG) HSP 1 Score: 151 bits (381), Expect = 9.620e-33 Identity = 103/289 (35.64%), Postives = 155/289 (53.63%), Query Frame = 3 Query: 192 MEPRPYQAEAFDAARKSNVVMVGATGVGKTLVSLMLIRDFYFEDSRRRESKNHKWCVFLCPTQELVFQQAKSAQIFTGVRCAPYVGR-DLDYWGLGKWRQEMDSKEVLVMTPNALLNLLHRGTEYLTLSDVGVLVFDECHKARKKHPYARVM-GFYLELSKQGAPLPKVFGMTASP------TVECV----EVLQSKAYVCDDDL-IEEFQANAEWELLFYKVFSPSQTVVDELEALMRMLFSETMCGFGDSKEKFVDTVVGPVLFSYEHLGLWCAVRHIVVFAEGFLR 1019
M+PR YQ E F+ A+ N + V TG GKTL+S +LI+ Y +D R + + CVFL PT LV QQAK Q TG++ +VG D+D+W KW +E+ + +V+ MTP LN+L T Y+ L+ VG+LVFDECH ARKK PY+ +M +Y ++++ PL MTASP T E + EVL + A + +E+ A+ E +F F+PS + LM L G K + + ++ V ++ E +G W A R + + +++
Sbjct: 1 MQPRSYQVELFERAKSGNTIAVLETGTGKTLISCLLIKHVYDQD--RNSGISGRLCVFLAPTVILVDQQAKYIQEKTGLKVRQFVGSMDVDHWNEDKWAKELTTADVVAMTPQIFLNIL--STNYINLTQVGLLVFDECHHARKKSPYSLIMKDYYSKMNEAERPL--FLWMTASPVFSKKTTEESILKLQEVLCAAAVTATSRVDVEKHAPKAQEETVF---FAPSPKY--DWTPLMHGLRDR-----GLVKHRIIQAMLNNVQYTLEKIGRWAAERELKMLLTAYIQ 273
BLAST of mRNA_C-linearis_contig10.527.1 vs. uniprot
Match: A0A6P6UAG0_COFAR (endoribonuclease Dicer homolog 2 isoform X1 n=8 Tax=Coffea TaxID=13442 RepID=A0A6P6UAG0_COFAR) HSP 1 Score: 148 bits (373), Expect = 8.220e-32 Identity = 100/305 (32.79%), Postives = 154/305 (50.49%), Query Frame = 3 Query: 186 CTMEPRP----YQAEAFDAARKSNVVMVGATGVGKTLVSLMLIRDFYFEDSRRRESKNHKWCVFLCPTQELVFQQAKSAQIFTGVRCAPYVG-RDLDYWGLGKWRQEMDSKEVLVMTPNALLNLLHRGTEYLTLSDVGVLVFDECHKARKKHPYARVMG--FYLELSKQGAPLPKVFGMTASPTV---------------ECVEVLQSKAYVC-DDDLIEEFQANAEWELLFYKVFSPSQTVVDELEALMRML---------FSETMCGFGDSKEKFVDTVVGPVLFSYEHLGLWCAVRHIVVFA 1004
C +P P YQ EA + A K N ++ TG GKTL+++ML+R + + + + + VFL PT LV QQ+K+ + T ++ Y G +DYW W+Q++D EVLVMTP LL+ L G +L L + VL+FDECH AR KHPYA +M ++L ++ + LP++FGMTASP E ++ SK Y C + ++ E+ + +L FYK V + + +++L S +S K +D + +LF LG+W A++ FA
Sbjct: 20 CGADPLPFARSYQLEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLIRKPKPF----FAVFLVPTVVLVEQQSKAVMMHTDLKVGKYWGDMGVDYWDAATWKQQVDEFEVLVMTPAILLSALRHG--FLKLDLIKVLIFDECHNARGKHPYACIMTEFYHLYMNSNFSDLPRIFGMTASPIKAKGSSSSSLCWQHIHELENLMNSKVYTCISESVLAEYIPFSTPKLKFYKHMDIPYIVFERVANGLKILREKYEHSIDASSLPESIAESTRKKLDKLFSTLLFCLSELGVWLALKAAESFA 318
BLAST of mRNA_C-linearis_contig10.527.1 vs. uniprot
Match: A0A3Q0EUT1_VIGRR (endoribonuclease Dicer homolog 2 isoform X1 n=5 Tax=Vigna TaxID=3913 RepID=A0A3Q0EUT1_VIGRR) HSP 1 Score: 146 bits (369), Expect = 2.450e-31 Identity = 94/290 (32.41%), Postives = 151/290 (52.07%), Query Frame = 3 Query: 201 RPYQAEAFDAARKSNVVMVGATGVGKTLVSLMLIRDFYFEDSRRRESKNHKWCVFLCPTQELVFQQAKSAQIFTGVRCAPYVG-RDLDYWGLGKWRQEMDSKEVLVMTPNALLNLLHRGTEYLTLSDVGVLVFDECHKARKKHPYARVMG--FYLELSKQGAPLPKVFGMTASPTV---------------ECVEVLQSKAYVCDDD-LIEEFQANAEWELLFYKVFSPSQTVVDELEALMRML---------FSETMCGFGDSKEKFVDTVVGPVLFSYEHLGLWCAVR 986
R YQ EA D A + N ++ TG GKTL+++ML+R + + + VFL P LV QQA++ ++ T ++ Y G + +D+W W+QEMD EVL+MTP LLN L +L L+ + VL+ DECH AR +HPYAR+M ++ +L + LP++FGMTASP + + ++ SK Y C + +I EF + +L FY + +E+ + ++ML S+ +S +K + + ++FS LG+W A++
Sbjct: 57 RSYQLEALDKAIRENTIVYLETGSGKTLIAIMLLRSY----AHHFRKPSPFIAVFLVPQVVLVSQQAEAVKMHTDLKVGVYWGEKGVDFWDAATWKQEMDKHEVLIMTPVILLNCLRHS--FLKLNMIKVLIMDECHHARGRHPYARIMTEFYHHQLHSGSSDLPRIFGMTASPIKTKVGKSESSLSENIRKLMTLMHSKVYTCASEAVITEFIPTSTPKLKFYDENGIQFVLFEEIASKLKMLKDQHELTLESSDFTRSAAESAQKRITKMFDALIFSLGELGVWLALK 340 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.527.1 >prot_C-linearis_contig10.527.1 ID=prot_C-linearis_contig10.527.1|Name=mRNA_C-linearis_contig10.527.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1944bp MEPRPYQAEAFDAARKSNVVMVGATGVGKTLVSLMLIRDFYFEDSRRRESback to top mRNA from alignment at C-linearis_contig10:1788418..1827760+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.527.1 ID=mRNA_C-linearis_contig10.527.1|Name=mRNA_C-linearis_contig10.527.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=39343bp|location=Sequence derived from alignment at C-linearis_contig10:1788418..1827760+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1788418..1827760+ >mRNA_C-linearis_contig10.527.1 ID=mRNA_C-linearis_contig10.527.1|Name=mRNA_C-linearis_contig10.527.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=11664bp|location=Sequence derived from alignment at C-linearis_contig10:1788418..1827760+ (Chordaria linearis ClinC8C monoicous)back to top |