mRNA_C-linearis_contig10.522.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_C-linearis_contig10.522.1 vs. uniprot
Match: D7FZW4_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW4_ECTSI) HSP 1 Score: 867 bits (2239), Expect = 4.280e-312 Identity = 444/564 (78.72%), Postives = 482/564 (85.46%), Query Frame = 1 Query: 46 MPSKQAFDMVCLGGGVAAGYWAEEVVSLLKSGAGQPGFTRPKMCIVSGYPDGLAPYERSEISKECLRPASQHSRDWQAWGNKVFPFTSTGNDRERRTARWYRDNGVTILSWSECYEVDVATSTMKLYQYSDRARTRAKAKQTTVSYGSLLVATGSSPRRLQGDQESACYCVRHSDLRGPKLDKPDAYGLGSAHYLRDVGDCIKLVKALSTVPAGAGGGAEGG-GDANTVALVGGGLLCMEVAAAIVTHYPGVRPVLLMSGPGLMPDFFSQEMSEFYEARLIEAGVSIEKNVTAERLWGLEEQGEFDTLGGRRVHFGPAPRGFTECRGVVLRNNEDRLIHVPARAVMIGIGSAPNSGLFRGKLELSEDGGLSVDAQCRALLEPSSEGEAGKGGV-----AADLPIYAAGDVAAFPLALEGSRRVRHEHIQNARDMATCAARNMVGSSSAGSLVPSSDGAGLKKDS-GGGELPVYEPVPAFSSRFLGLSWRFYGVAEGEVAVLGAAEFRTTRTFGAFWVRGERVVGAFLEGGTIEQQIAVAQVTRLRPKVFSSRLLKDSQLGDFLE 1716
M S+Q FDMVCLGGGV+AGYWAEEVVSLLKSGA QPGF RPK+C+V+GYPDGL PYERSE+SKECLRP + HSRDWQAWGNKVFPFTSTGNDRERR ARWYRDNGVT+LS ECYEVDVA +T++LYQ P+RLQGDQ+SAC+CVRHSDLRGPKLDKP+AYGLGSAHYLRDVGDCIKLVKALSTVP+G GGA GG GDANTVALVGGG+LCMEVAAAIVTHYPGVRP+LLMSG LMPDFF+QEMS+FYE +L +AGV +EKNVTAERLWGLEEQGEFDTLGGRRVHFGPAPRGFTECRGVVLRN ED LIHVPAR+V+IGIG+ PNS LFRGKLE+SEDGG+ VDAQCR ++P SE + G GG+ A PIYAAGDVAAFPLALEG VRHEHIQNARDMA CAARNMVGSS+ GSLV S+ AG +KD GGGELP+Y+PVP FSSRFLGLSWRFYGVAEGEV VLGAAEFRTTRTFGAFWVR ERVVGAFLEGGTIEQQIAVAQVTRLRPKVFSS+LLK SQLGDFLE
Sbjct: 1 MASEQMFDMVCLGGGVSAGYWAEEVVSLLKSGAEQPGFNRPKLCVVTGYPDGLVPYERSEMSKECLRPENNHSRDWQAWGNKVFPFTSTGNDRERRNARWYRDNGVTVLSSCECYEVDVANATLRLYQ----------------------------PKRLQGDQDSACFCVRHSDLRGPKLDKPEAYGLGSAHYLRDVGDCIKLVKALSTVPSG--GGAGGGTGDANTVALVGGGVLCMEVAAAIVTHYPGVRPILLMSGSRLMPDFFNQEMSDFYEEKLKQAGVRLEKNVTAERLWGLEEQGEFDTLGGRRVHFGPAPRGFTECRGVVLRNTEDCLIHVPARSVIIGIGAVPNSELFRGKLEMSEDGGVLVDAQCRTAVQPPSE-DGGGGGIDVGSAAPPRPIYAAGDVAAFPLALEGFAPVRHEHIQNARDMAICAARNMVGSSAWGSLVSSAGEAGFQKDYYGGGELPMYQPVPGFSSRFLGLSWRFYGVAEGEVVVLGAAEFRTTRTFGAFWVRKERVVGAFLEGGTIEQQIAVAQVTRLRPKVFSSQLLKGSQLGDFLE 533
BLAST of mRNA_C-linearis_contig10.522.1 vs. uniprot
Match: A0A6H5KQM3_9PHAE (MDHAR protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM3_9PHAE) HSP 1 Score: 406 bits (1044), Expect = 5.160e-136 Identity = 194/231 (83.98%), Postives = 211/231 (91.34%), Query Frame = 1 Query: 46 MPSKQAFDMVCLGGGVAAGYWAEEVVSLLKSGAGQPGFTRPKMCIVSGYPDGLAPYERSEISKECLRPASQHSRDWQAWGNKVFPFTSTGNDRERRTARWYRDNGVTILSWSECYEVDVATSTMKLYQYSDRARTRAKAKQTTVSYGSLLVATGSSPRRLQGDQESACYCVRHSDLRGPKLDKPDAYGLGSAHYLRDVGDCIKLVKALSTVPAGAGGGAEGGGDANTVALV 738
M S+Q FDMVCLGGGV+AGYWAEEVVSLLKSGA QPGF RPK+CIV+GYPDGL PYERSE+SKECLRP + HSRDWQAWGNKVFPFTSTGNDR+RR ARWYRDNGVT+LS ECYEVDVA +T++LYQYSDRARTRAKAKQ TV+YGSLLVATGS+P+ LQGDQ+SAC+CVRHSDLRGPKL KP+AYGLGSAHYLRDVGDCIKLVKALSTVP G G G G GDANTVALV
Sbjct: 1 MTSEQVFDMVCLGGGVSAGYWAEEVVSLLKSGAEQPGFNRPKLCIVTGYPDGLVPYERSEMSKECLRPENNHSRDWQAWGNKVFPFTSTGNDRDRRNARWYRDNGVTVLSSCECYEVDVANATLRLYQYSDRARTRAKAKQLTVTYGSLLVATGSAPKHLQGDQDSACFCVRHSDLRGPKLAKPEAYGLGSAHYLRDVGDCIKLVKALSTVPPGGGAGG-GAGDANTVALV 230
BLAST of mRNA_C-linearis_contig10.522.1 vs. uniprot
Match: A0A6H5KRR4_9PHAE (MDHAR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRR4_9PHAE) HSP 1 Score: 358 bits (919), Expect = 3.280e-115 Identity = 213/366 (58.20%), Postives = 233/366 (63.66%), Query Frame = 1 Query: 856 MSEFYEARLIEAGVSIEKNVTAERLWGLEEQ----------------------GEFDTLGGRRVHFGPAPRGFTECRGVVLRNNEDRLIHVPARAVMIGIGSAPNSGLFRGKLELSE--------DGGLSVDAQCRALLEPSSEGEAGKGGV-----AADLPIYAAGDVAAFPLALEGSRRVRHEHIQNARDMATCAARNMVGSSSAGSLVPSSDGAGLKKDS-GGGELPVYEPVPAFSSRFLGLSWR-------------------------------------------------------------FYGVAEGEVAVLGAAEFRTTRTFGAFWVRGERVVGAFLEGGTIEQQIAVAQVTRLRP 1662
MS+FYE +L +AGV +EKNVTAERLWGLEEQ GEFDTLGGRRVHFGPAPRGFTECRGVVLRN ED LIHVPAR V+IGIG+ PNS LFRGKLE+SE DGG+ VD+QCR ++P SE + G GG+ A PIYAAGDVAAFPLALEG VR+EHIQNARDMA CAA+NMVGSS+ GSLV S+ AG +KD GGGELP Y+PVP FSSRFLGLSWR FYGVAEGEV VLGAAEFRTTRTFGAFWVR ERVVGAFLEGGTIEQQIAVAQ +P
Sbjct: 1 MSDFYEEKLKQAGVRLEKNVTAERLWGLEEQARTPGAWQTQQSATIIVDICYRGEFDTLGGRRVHFGPAPRGFTECRGVVLRNTEDCLIHVPARTVIIGIGAVPNSELFRGKLEMSEVGTGDGRLDGGILVDSQCRTAVQPPSE-DGGGGGIDVGSAAPPRPIYAAGDVAAFPLALEGFAAVRYEHIQNARDMAICAAKNMVGSSAWGSLVSSAGEAGFQKDYYGGGELPTYQPVPGFSSRFLGLSWRLEFGSLSEAMLSTTFHRYPGIFNFPYIARHSLPFGVFPLHHGTLTRRFLRLRVPGRKLPRRFYGVAEGEVVVLGAAEFRTTRTFGAFWVRKERVVGAFLEGGTIEQQIAVAQAFAAKP 365
BLAST of mRNA_C-linearis_contig10.522.1 vs. uniprot
Match: A0A835YL95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL95_9STRA) HSP 1 Score: 299 bits (765), Expect = 2.060e-88 Identity = 224/656 (34.15%), Postives = 300/656 (45.73%), Query Frame = 1 Query: 64 FDMVCLGGGVAAGYWAEEVVSLLKSGAGQPGFTRP-KMCIVSGYPDGLAPYERSEISKECLRPASQHSRDWQAWGNKVFPFTSTGNDRERRTARWYRDNGVTILSWSECYEVDVATSTMKLYQYSDRARTRAKA-KQTTVSYGSLLVATGSSPRRLQGDQE-------SACYCVRHSDLRGPKLDKPDAYGLG--SAHYLRDVGDCIKLVKALST---VPAGAGGGAEGGGDANTVALVGGGLLCMEVAAAIVTHYPGVRPVLLMSGPGLMPDFFSQ-----------------------EMSEFYEARLIEAGVSIEKNVTAERLWGLEEQGEFDTLGG-----------RRVHFGPAPRG---------FTECRGVVLRNNEDRLIHVPARA--------------------------------VMIGIGSAPNSGLFRGKLELSEDGGLSVDAQCRALLEPSSEGEAGKGGVAADLPIYAAGDVAAFPLALEGSRRVRHE----------------HIQNARDMATCAARNMVGSSSAGSLVPSSDGAGLKKDSGGGELPVYEPVPAFSSRFLGLSWRFYGVAEGEVAVLGAAEFRTTRTFGAFWVRGERVVGAFLEGGTIEQQIAVAQVTRLRPKVFSSRLLKDSQLGDFLE 1716
FDMVCLGGGV AGYWAE V L++ + P K+ IV+ YP+G+ PYER SKE L PA +RD QA G+ FP T + RE R A+WY+ N +T +C V+ ++L Q+ D R A K V YG LLVATGS+P +LQ S CYC++H D++ K+D LG + HYLRD+ DC KLVKALS+ PA G + V +VG L +E A+V YP V+PV+L+ G +M F + E+++ YE L GV + N +R+W E G +TL G +R+ F E RGVV H+ R V++ GS PN+ RG + ++DGG+ VD+ ALL + IYAAGDVA+FPL+ E +R+ H+ +AR+MA AARNM +++A P VP + +FL SW FYGVAEGEVAVLG E+ T +FGAFWVR VVGAFLEGG + A+ ++ RPKV + L L FL+
Sbjct: 44 FDMVCLGGGVVAGYWAEACVELIEKDPLLKKRSSPLKLAIVTSYPEGIYPYERPACSKELLDPALTLARDPQAKGSS-FPLTGSLGGREGRGAKWYKANNITFYWGCQCTAVNADAKELELAQWLDEKGKRMDAPKPRQVKYGKLLVATGSAPAQLQHVSTKGGIPALSGCYCLQHPDVKVTKIDAATEANLGHGTLHYLRDIADCTKLVKALSSKTVTPA---------GQEDEVLVVGSSFLAVEAVCAMVQWYPHVKPVMLVRGSHIMEGFLTXXXXXXXXXXXXXXXXXXXXXXXXELADVYENELEARGVKLMYNADVQRMWLQSECGRLNTLDGVQKRIVERHLMKRIAADRCRAAQVIARDDARFKEVRGVVASVKGGMPAHIQGRRTKSLYTRDAAYKFWLARSRGDVRMPVRSMGRIVVVCAGSVPNTAALRGVVTTAKDGGILVDS---ALLSSKRD-------------IYAAGDVASFPLSCEDGIMMRNXXXXXXXXXXXXXSRSTHVHDAREMARVAARNMALAAAAAQFTP---------------------VPMRALKFLKFSWTFYGVAEGEVAVLGLDEYDETESFGAFWVRKGEVVGAFLEGGNTDDIKAIEKIATERPKVANLASLLAMPLASFLQ 652
BLAST of mRNA_C-linearis_contig10.522.1 vs. uniprot
Match: A0A7S4A4F3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4F3_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.160e-48 Identity = 180/596 (30.20%), Postives = 269/596 (45.13%), Query Frame = 1 Query: 55 KQAFDMVCLGGGVAAGYWAEEVVSLLKSGAGQPGFTRPKMCIVSGYPDGLAPYERSEISKE---CLR------PASQHSRDWQAWGNKVFPFTSTGNDRERRTARWYRDNGVTILSWSECYEVDVATSTMKLYQYSDRARTRAKAKQTTVSYGSLLVATGSSPRRLQGDQESACYCVRHSD-----------LRGPKLDKPDAYGLGSAHYLRDVGDCIKLVKALSTVPAGAGGGAEGGGDANTVALVGGGLLCMEVAAAIVTHYPGVRPV-LLMSGPGLMPDFF------------SQEMSEFYEARLIEAGVSIEKNVTAERLWGLEEQGEFDTLGGRRV--------HFGPAP-RGFTECRGVVLRNNED-RLIHVPARAVMIGIGSAPNSGLFRGKLELSEDGGLSVDAQCRALLEPSSEGEAGKGGVAADLPIYAAGDVAAFPLALEGSRRVRHEHIQNARDMATCAARNMVGSSSAGSLVPSSDGAGLKKDSGGGELPVYEPVPAFSSRFLGLSWRFYGVAEGEVAVLGAAEFRTTRTFGAFWVRGERVVGAFLEGGTIEQQIAVAQVTRLRPKVFSSRLLKDSQLGDFL 1713
KQA +V +GGGVAA + A+ +L + P + I+S YP G++PY+RS ISK+ C R P+ + W KV T D ++ T YRD +T YE + + + D+ V GS+ +G ++ AC +R L G GS HYLRD+GD K+ +A+S A G E D V +VGGG+L ME+AA I PV +++S +MP F +++++EFYE +L++ GV + RLW ++E GEF T+ G + F P F+ CRG+V+ NN + A+ V++ +G PNS +F L+L++D + VDA CR S G+ ++A GDVA++PL R +R H Q A A A + + PS G + S GG+ ++PVP +S+ L L W FYG GE LG + + R FG FWV RVVG FLEGG+ E++ ++ +RP++ + + DFL
Sbjct: 3 KQARVLV-VGGGVAAAHVAQ---ALCERAEELPETDKALCTILSAYPAGISPYDRSRISKDALDCTRLDATSFPSLELPDGVALWSGKVV--TKCDPDAKKVT---YRD-AITGDEDEITYEKLIIATGARAKVLDDQPYLWQDKHSDVVDNGSIE----------EGGEDIACAPAXXXXXXXXXXXPAPRIRPWCLQADKNCGFGSVHYLRDIGDAAKVSEAVSMKEAD---GQETCSD--PVVIVGGGILTMELAAKIARFRGQKVPVNVVLSRDRIMPKVFREDIAPEAGSLGAKDVAEFYERQLVKCGVKFIREHRCLRLWDVDESGEFPTMEGPAISLQRTRPRRFEPLQGEYFSTCRGIVVENNHSAERSWIAAKCVILCLGDEPNSQVFS-FLDLADDSSIKVDATCRTS---HSSGD-----------VFAVGDVASYPLPRSKERCMRLPHYQQAFSTAVYVAHQCIDAMK----QPSRPGTRDSRRSIGGD--PFDPVPCITSQVLDLDWVFYGRNVGECVPLGF-DGNSDRYFGCFWVEDMRVVGCFLEGGSDEEKTICEKIAEMRPRLTRMHKFRSLECEDFL 551
BLAST of mRNA_C-linearis_contig10.522.1 vs. uniprot
Match: D7FRA9_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA9_ECTSI) HSP 1 Score: 166 bits (421), Expect = 4.110e-41 Identity = 108/260 (41.54%), Postives = 140/260 (53.85%), Query Frame = 1 Query: 538 ESACYCVRHSDLRGPKL--DKPDAYGLGSAHYLRDVGDCIKLVKALSTVPAGAGGGAEGGGDA--NTVALVGGGLLCMEVAAAIVTHYPGVRPVLLMSGPGLMPDF-FSQEMSEFYEARLIEAGVSIEKNVTAERLWGLEEQGEFDTLG----GRRVH------FGPAPRGFTECRGVVLRNNED-RLIHVPARAVMIGIGSAPNSGLFRGKLELSEDGGLSVDAQCRALLEPSSEGEAGKGGVAADLPIYAAGDVAAFP 1269
+ +C C RH D+ G L PD +G GS HYLRD GD +KLV A+ V A G D V L+GGG + EVAAA+ TH PG++ V++M G +M F +E+ FYE +L GV+ K RLWG+EE+G F TL G + FGPA FT+CRGVVL N + + + AR V++GIGS PNS LF L LSEDGG+ D+ R PS + ++AAGDVA P
Sbjct: 136 QGSCCCTRHPDVDGSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEA-------DGQDTCKEPVVLIGGGFISCEVAAAVATHCPGMQLVMVMPGEDVMSSSGFGKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSSMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKVWLLARFVVVGIGSVPNSDLFLKSLVLSEDGGIITDSYLRTS-HPSGD-------------VFAAGDVACVP 374
BLAST of mRNA_C-linearis_contig10.522.1 vs. uniprot
Match: UPI001F5C27C1 (monodehydroascorbate reductase 1, peroxisomal-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C27C1) HSP 1 Score: 165 bits (418), Expect = 1.000e-40 Identity = 164/544 (30.15%), Postives = 246/544 (45.22%), Query Frame = 1 Query: 58 QAFDMVCLGGGVAAGYWAEEVVSLLKSGAG-QPGFTRPKMCIVSGYPDGLAPYERSEISKECLRPASQHSRDWQAWGNKVFP--FTSTGNDRERRTARWYRDNGVTILSWSECYEVDVATSTMKLYQYSDRARTRAKAKQTTVSYGSLLVATGSSPRRLQGDQESACYCVRHSDLRGPKLDKPDAYGLGSAHYLRDVGDCIKLVKALSTVPAGAGGGAEGGGDANTVALVGGGLLCMEVAAAIVTHYPGVRPVLLMSGPGLMPDFFSQEMSEFYEARLIEAGVSI--EKNVTAERLWGLEEQGEFDTLGGRRVHFGPAPRGFTECRGVVLRNNEDRLIHVPARAVMIGIGSAPNSGLFRGKLELSEDGGLSVDAQCRALLEPSSEGEAGKGGVAADLPIYAAGDVAAFPLALEGSRRVRHEHIQNARDMATCAARNMVGSSSAGSLVPSSDGAGLKKDSGGGELPVYEPVPAFSSRFLGLSWRFYGVAEGEVAVLG--AAEFRTTRTFGAFWVRGERVVGAFLEGGTIEQQIAVAQVTRLRPKV 1668
+AF V LGGGVAAGY A E+V + G G PG ++CI+S + +APYER +SK L P G P T G + E T +WY+D+G+ ++ ++ DV R +T A T+SY +L++ATG+ +L+ + V SD + YLR + D K+V + + G N V ++GGG + ME AAA+V + ++ ++ + F+ +++EFYE GV+ E VT+ F+T +V +LR+ +PA V++GIG+ N+ LF G+L + E GG+ V+ + + +D +YA GDVAAFP+AL G R+EH+ AR A A +++ SDGA + + G ++ +P F SR GLSW+FYG GE G +A FGA WV G V G FLEGG+ E+ AVA R R ++
Sbjct: 3 RAFAYVILGGGVAAGYAALELV---RHGDGVSPG----ELCIISD--EAVAPYERPALSKGYLLPR----------GAARLPAFHTCVGANDELLTEQWYKDHGIELVLATKVVSADV------------RRKTLLTATGETISYKTLIIATGARALKLEE------FGVTRSDAT-------------NVCYLRSLEDADKMVGVMRSCHGG-----------NAV-VIGGGYIGMECAAALVANE--IKVAMVFPRKHCLDRLFTPKIAEFYENYYAAKGVTFIKESRVTS-----------FETSSDGKV------------TAAILRDGR----RLPADMVVVGIGARANAELFDGQLAM-EKGGIKVNGRMQT----------------SDAAVYAVGDVAAFPVALLGGDVRRYEHVDCARRTARRAVE---------AIMERSDGAEERGEKG------FDYLPFFYSRVFGLSWQFYGDNVGEPVHFGDFSAPAGGRPKFGACWVSGGLVAGVFLEGGSREENEAVASAVRCRARI 423
BLAST of mRNA_C-linearis_contig10.522.1 vs. uniprot
Match: A0A383W634_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W634_TETOB) HSP 1 Score: 161 bits (408), Expect = 2.240e-39 Identity = 164/593 (27.66%), Postives = 239/593 (40.30%), Query Frame = 1 Query: 61 AFDMVCLGGGVAAGYWAEEVVSLLKSGAGQPGFTRPKMCIVSGYPDGLAPYERSEISKECLRPASQHSRDWQAWGNKVFP--FTSTGNDRERRTARWYRDNGVTILSWSECYEVDVATSTMKLYQYSDRARTRAKAKQTTVSYGSLLVATGSSPRRLQGDQESACYCVRHSDLRGPKLDKPDAYGLGSAHYLRDVGDCIKLVKALSTVPAGAGGGAEGGGDANTVALVGGGLLCMEVAAAI--------------------------VTHYPGVRPV-----------------------LLMSGPGLMPDFFSQEMSEFYEARLIEAGVSIEKNVTAERLWGLEEQGEFDTLGGRRVHFGPAPRGFTECRGVVLRNNEDRLIHVPARAVMIGIGSAPNSGLFRGKLELSEDGGLSVDAQCRALLEPSSEGEAGKGGVAADLPIYAAGDVAAFPLALEGSRRVRHEHIQNARDMATCAARNMVGSSSAGSLVPSSDGAGLKKDSGGGELPVYEPVPAFSSRFLGLSWRFYGVAEGE------------VAVLGAAEFRTTRTFGAFWVRGERVVGAFLEGGTIEQQIAVAQVT 1650
A+++V LGGG A GY A+E+V+L QPG K+ IV+ + + YER +SK L P G P T G ER+T WY++ G+ L+ S DVA T+ L A +SY L++ATG+ P RL +D + P + LG HYLR+V D L+ A++ A N +VGGG + +EVAA + Y G+ V ++ LM + E++ FY A G+ + K A+ EF +G + VVL + +PA V++G G+ P SGLF G+L L + GG+ VD + S+EG +YA GDVA+FPL + G VR EH+ +AR A AA+ ++G++ A Y+ P F SR LSW+F+G EG A AA + FGA+W++G +V+GAF+EG E+ A+ VT
Sbjct: 2 AYEVVALGGGNACGYLAKELVAL----GLQPG----KLAIVTD--EAVVAYERPALSKAYLFPE----------GAARLPGFHTCVGGGGERQTPEWYKEKGIAYLTNSRVTAADVAAKTLTL------------ASGEVLSYQQLVIATGADPVRL-------------ADFKAPGAE------LGGIHYLRNVADADALLAAVAAAKAAG----------NKAVVVGGGYIGLEVAAGLSLLSVNAAXXXXXXXXXXXVVQXXXXXXXYIGLEAVXXXXXXXXXXVAAGLSLQGLDVTMVFPEQHLMARILTPELAAFYMAYYEAKGIKLLKGQLAK---------EF--------------KGDGKVSSVVLSDGST----LPADLVLVGAGARPASGLFAGQLTLDKAGGIVVDGS----FKTSAEG------------VYAIGDVASFPLLVAGGALVRQEHVTHARSSAAQAAKALMGANPA----------------------PYDYQPYFYSREFNLSWQFFGQMEGAEQVVSWGVLDAAAAAASAAPGGPSPKFGAYWIKGGKVIGAFIEGAAAEESAALKAVT 468
BLAST of mRNA_C-linearis_contig10.522.1 vs. uniprot
Match: A0A8J5SUY9_ZIZPA (Pyr_redox_2 domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SUY9_ZIZPA) HSP 1 Score: 154 bits (388), Expect = 1.060e-36 Identity = 154/550 (28.00%), Postives = 229/550 (41.64%), Query Frame = 1 Query: 58 QAFDMVCLGGGVAAGYWAEEVVSLLKSGAGQPGFTRPKMCIVSGYPD--------------GLAPYERSEISKECLRPASQHSRDWQAWGNKVFP--FTSTGNDRERRTARWYRDNGVTILSWSECYEVDVATSTMKLYQYSDRARTRAKAKQTTVSYGSLLVATGSSPRRLQGDQESACYCVRHSDLRGPKLDKPDAYGLGSAHYLRDVGDCIKLVKALSTVPAGAGGGAEGGGDANTVALVGGGLLCMEVAAAIVTHYPGVRPVLLMSGPGLMPDFFSQEMSEFYEARLIEAGVSIEKNVTAERLWGLEEQGEFDTLGGRRVHFGPAPRGFTECRGVVLRNNEDRLIHVPARAVMIGIGSAPNSGLFRGKLELSEDGGLSVDAQCRALLEPSSEGEAGKGGVAADLPIYAAGDVAAFPLALEGSRRVRHEHIQNARDMATCAARNMVGSSSAGSLVPSSDGAGLKKDSGGGELPVYEPVPAFSSRFLGLSWRFYGVAEGEVAVLG--AAEFRTTRTFGAFWVRGERVVGAFLEGGTIEQQIAVAQVTR 1653
+AF V LGGGVAAGY A E V + G +R K+CI+S +APYER +SK L P G P T G + E T WY +G+ ++ + DV ++ T+SY +L+VATG+ +L+ + V SD+R + YLR++GD KLV + + P G +VGGG + ME AAA+VT+ + ++ G M F+ +++EFYE GV K + + V G + V+L + + A V++G+G+ N+GLF G+L + E GG+ V+ Q +A +D +YA GDVAAFP+ L G R EH+ AR A A ++ ++ G + + +P F SR LSW+ YG GE G A T FGA+WVR R+ GAF+EGG+ ++ ++A R
Sbjct: 3 RAFVYVILGGGVAAGYAALEFVR-------RNGDSRDKLCIISDEQARSLLLLCLLSFNSCSVAPYERPALSKGFLLPQ----------GAPRLPEFHTCVGANDELLTKEWYSKHGIVLVLGTRVTSADV--------------------RRKTISYKTLIVATGARALKLEE------FGVSGSDVR-------------NVCYLRNLGDADKLVDVMGSCPGG------------KAVVVGGGYIGMECAAALVTNK--INVTMVFPGKHCMNRIFTPKIAEFYERYYTSKGVIFVKEASVTSM---------------EVSAG-------KVTAVMLGDGR----RLTADMVVVGVGARANTGLFEGQLVM-EKGGIKVNGQMQA----------------SDASVYAVGDVAAFPVKLFGGDVRRLEHVDCARRTARHAVAAILDAT--------------------GSVGDIDYLPFFYSRLFSLSWQLYGDNAGEAVHFGDLAPGDGATPKFGAYWVREGRIAGAFIEGGSRQENESIAATVR 419
BLAST of mRNA_C-linearis_contig10.522.1 vs. uniprot
Match: A0A843X201_COLES (Pyr_redox_2 domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843X201_COLES) HSP 1 Score: 138 bits (347), Expect = 7.530e-31 Identity = 146/533 (27.39%), Postives = 226/533 (42.40%), Query Frame = 1 Query: 199 GLAPYERSEISKECL----RPASQHSRDWQAWGNKVFPF-TSTGNDRERRTARWYRDNGVTILSWSECYEVDVATSTMKLYQYSDRARTRAKAKQTTVSYGSLLVATGSSPRRLQGDQESACYCVRHSDLRGPKLDKPDAYGLGSAHYLRDVGDCIKLVKALSTVPAGAGGGAEGGGDANTVALVGGGLLCMEVAAAIVTHYPGVRPVLLMSGPGLMPDFFSQEMSEFYEARLIEAGVSIEKNVTAERLWGLEEQGEFDTLGGRRVHFGPAPRGFTECRGVVLRNNEDRLIHVPARAVMIGIGSAPNSGLFRGKLELSEDGGLSVDAQCRALLEPSSEGEAGKGGVAADLPIYAAGDVAAFPLALEGSRRVRHEHIQNARDMATCAAR---------NMVG--------------SSSAGSL--VPSSDGAGLKKDSGGGELPVYEPVPAFSSRFLGLSWRFYGVAEGEVAVLGAAEFRTTRT-FGAFWVRGERVVGAFLEGGTIEQQIAVAQVTRLRPKVFSSRLLKDSQLG 1704
G+ P E + ISKE + RPA + ++ F G+ ER WY + G+ ++ +E + D+A+ + A T Y +L++ATGS+ RL + V+ +D G YLR++ D KLV A+ A+ GG A +VGGG + +E+ AA+ + V ++ P MP F+ ++ FYE G+ I K A V F G + V L++ R++ A V++G+G P + LF+G+LE E GG+ D + +YA GDVA FPL L R R EH+ ++R A A + N +G SS G L + ++D A +K G G Y+ +P F SR LSW+FYG G+ + G + + + FG +W++ +VVGAFLE GT ++ A+A+V R++P V S L L
Sbjct: 117 GVNPGELAIISKESVAPYERPALSKGYLFPQGAARLPGFHVCVGSGGERLLPEWYTEKGIELILSTEIVKADLASKAL------------TSAAGETFKYDTLIIATGSTVIRLSD------FGVQGADANG-------------IFYLREIDDADKLVAAIQ---------AKKGGKA---VIVGGGYIGLELGAALSINDLDVT--MVYPEPWCMPRLFTSGIAAFYEGYYANKGIKIIKGTVA-------------------VGFDSNANG--DVTAVKLKDG--RVLE--ADIVVVGVGGRPLTTLFKGQLE-EEKGGIKTDGFFKTSAPD----------------VYAVGDVATFPLKLYNELR-RVEHVDHSRKSAEQAVKFASRVDANYNPIGGGHNPRGWPTPNDLSSPNGELGLLQTADKAAIKASEGVGSFEEYDYLPYFYSRAFDLSWQFYGDNVGDTVLFGDNDPSSAKPKFGTYWIKDGKVVGAFLESGTSDENKAIAKVARVQPPVESLDQLTQQGLA 561 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.522.1 >prot_C-linearis_contig10.522.1 ID=prot_C-linearis_contig10.522.1|Name=mRNA_C-linearis_contig10.522.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=582bp MPSKQAFDMVCLGGGVAAGYWAEEVVSLLKSGAGQPGFTRPKMCIVSGYPback to top mRNA from alignment at C-linearis_contig10:1744984..1753010- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.522.1 ID=mRNA_C-linearis_contig10.522.1|Name=mRNA_C-linearis_contig10.522.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8027bp|location=Sequence derived from alignment at C-linearis_contig10:1744984..1753010- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1744984..1753010- >mRNA_C-linearis_contig10.522.1 ID=mRNA_C-linearis_contig10.522.1|Name=mRNA_C-linearis_contig10.522.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3492bp|location=Sequence derived from alignment at C-linearis_contig10:1744984..1753010- (Chordaria linearis ClinC8C monoicous)back to top |