mRNA_C-linearis_contig10.520.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig10.520.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 1338 bits (3463), Expect = 0.000e+0
Identity = 739/872 (84.75%), Postives = 782/872 (89.68%), Query Frame = 1

Query:    1 EVARVALEMGSTVADIVEFMHELGGEVPVVGAVLITLKAIREKVETVQSNMEGLKALEERCTYVTARVVVKWRQNSSSEMDVAPLESCVNAAEDFIERCSQRGWCGRCTKASSDKDELAALNARVDSLVGDVGLVALATLDAKVDDLKATLAEAIPQNQTPATVPVAAVPKGKPAEQSWHVARDRVVNAVYEHLSSGQMPQVVGLVGRSGSGKTTCAASIVGEPKGVSSRRQSETGDQMLRRLNRVREHFRDGVVWLRVGRGAGSADRAPALMSHLAKTVFEELAHSYGFAPGGHDPRDGSTFIRDFVRGTGGAARPKRCLIVADDVWEVDILEELRHTGMWVLFTTRDPRLVERVEGSVVPVDQLSKAEAESLLRGAAELSTGSSLPSAAAKIIERCDRMANHLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEAEAQKNDEGLPEVKRVAILRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAVLLYDDGADDGASQRRTRQAAKVVANLEQWAVVTMHGDLFRMHDAHTDFARNKLKKSEDVRAPAVRRWRGFISTLATVRSTDYFELVDLWHATETVGGESWRVSRPYHVALDSIPDSSSECIPSLKAVVQFGINECAWDITHDVALRLLRVQKDAAVGHAELRHTLESLIHCANALNLNSGADAHRRELSSMVDAAWEERSHTANSPPRLVAEQLLERGQQLAITRRPDEAHEAISEALRIQQDGGGDFERLEISATLEFLAIVLVDLKRYNEGVEVYQRCLRIKENLYGHEHLRLTVTLHNLAVCALKRGEPGDVEMASELLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIKRLEDATTK 2616
            E ARV L+MGST ADIV F  ELGGEVPVVGAVL TLKAIR + E VQSN E LKALEERCTYVTA V+VKWRQ SSSEM+VAPLESCVNAAEDFI RCS+RG CGRCTKASSD DEL  LN+RVDSL GD+GL  +A+LDAKVDDLKA LAE I QN  PA+VPVAAVP GKP E SWHVARDRVV+AVYEHLS GQ PQVVGLVGRSGSGKTTCAASIVGE  G   R Q+ETGDQMLRRLNRVREHFRDGVVWLRVGRG GSA+R PALMS LAKTVFE+L HSYGFAPG      GS FI DFVRG G AA  KRCL+VADDVWEVDILEELRHTGMWVLFT+RDP LVERVEGSVVPVDQLSKAEAE LLRGAAELSTGSSLPSAAA++IERCDRMAN LEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEA AQK+DE L  VKRVAILRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAV L+DD A++ ASQRRTRQAAKVVANLEQWAVVTMHG+LFRMHDAH+DFARNKLK+SEDVRA A+RRWRGF S L T+RS DYFE+VDLWHATE +GGESWRVSRPYHVALDS+ DSS ECIPSLKAVV+FGINECAW++THDVALRLLRVQKDAAV HAE+RHTLESLIHCANALNLNS ADAHRRELS MVDAAWE RS+TA+SPPRLVA++LLERGQQLAITRRPDEAHEAISEALR+Q++  GDFERLEISATLEFLAIVLVDLKRYNEGVEVYQRCLRIKE+LYG EHLRLTVTLHNLAVCALKRGEPGDVE ASEL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        RIKRLEDA T+
Sbjct:   54 EAARVFLKMGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQNTMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGR--RHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVVTMHGNLFRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPECIPSLKAVVEFGINECAWEVTHDVALRLLRVQKDAAVEHAEVRHTLESLIHCANALNLNSDADAHRRELSLMVDAAWENRSNTASSPPRLVAKRLLERGQQLAITRRPDEAHEAISEALRLQEERSGDFERLEISATLEFLAIVLVDLKRYNEGVEVYQRCLRIKEDLYGLEHLRLTVTLHNLAVCALKRGEPGDVEKASELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQRHWEERIKRLEDANTE 923

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BLAST of mRNA_C-linearis_contig10.520.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 464 bits (1193), Expect = 7.860e-145
Identity = 331/826 (40.07%), Postives = 445/826 (53.87%), Query Frame = 1

Query:    1 EVARVALEMGSTVADIVEFMHELGGEVPVVGAVLITLKAIREKVETVQSNMEGLKALEERCTYVTARVVVKWRQNSSSEMDVAPLESCVNAAEDFIERCSQRGWCGRCTKASSDKDELAALNARVDSLVGDVGLVALATLDAKVDDLKATL------AEAIPQNQTPATVPVAAVPKGKPAEQSWHVARDRVVNAVYEHLSSGQMPQVVGLVGRSGSGKTTCAASIVGEPKGVSSRRQSETGDQMLRRLNRVREHFRDGVVWLRVGRGAGSADRAPALMSHLAKTVFEELAHSYGFAPGGHDPRDGSTFIRDFVRGTGGAARPKRCLIVADDVWEVDILEELRHTGMWVLFTTRDPRLVERVEGSVVPVDQLSKAEAESLLRGAAELSTGSSLPSAAAKIIERCDRMANHLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEAEAQKNDEGLPEVKRVAILRAGFLDLAAQNGFNPL--LYLSLAVMPDGRAFGAKEAAVLLYD--DGADDGASQRRTRQAAKVVANLEQWAVVTMHGDLFRMHDAHTDFARNKLKKSEDVRAPAVRRWRGFISTLATVRSTDYFELVDLWHATETVGGESWRVSRPYHVALDSIPDSSSECIPSLKAVVQFGINECAWDITHDVAL--RLLRVQK-DAAVGHAELRHTLESLIHCANAL-NLNSGADAHRRELSSMVDAAWEERSHTANSPPRLVAEQLLERGQQLAITRRPDEAHEAISEALRIQQDGGGDFERLEISATLEF------LAIVLVDLKRYNEGVEVYQRCLRIKENLYGHEHLRLTVTLHNLAVCALKRG 2418
            E AR+ALE+GST++D V    +LG E+PV+  V  TLKAIR  VETV++N E L ALE+RCTY+TA  VVK R    SE+DVAPL+ CV AA++F ERCS+RG   R  KA SDK E+A LN+ VD L  D+GL  +A L+ KVDD+K TL       E++P++       +AAVP G P  +SWHV R   +  V + L+      VV L G SGSGKTT AA IV                    R   VRE F DG+VWL V  GA    R P+LM  LA+ V EE+  S G  P   +  D +T+I+  +   G   R  +CL+VAD+VWE D++ +L  TGMWVL +TRD  +V+R  G  V VD+LS+A+AES+L+ AAEL   S LP  A  +I+ C R+A  + FVGRWSTV+G  D   W++A S I  EM  +  + +   + E +P  +R AIL+ GF DLA  +    +  LYLSLAVMPDG AF  K+AAVLLYD     +D AS      A  VV  LE+W+++      +RMHDAHTDFAR  L     VR PA++RW  ++S+L  +RSTD + L  LW A E +GG+ W  +RPY  AL  + +S +    + +AV  F   E   D+    A   RLL V+K +    H  + +T  +L   A  L N+   A  H +E+  +                             LA+ R     +  +   L    D       +  +A LEF      LA  L+            +R L +KE + G EHL++  TL  L V A + G
Sbjct:   11 EAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRL-IESEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLESLPRSFGK----LAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIV--------------------RSTEVREAFSDGIVWLPVNEGAKK--RLPSLMLQLARMVHEEIGGSVGRVPSASE--DSATYIKQRLE-EGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPD-NDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEAS------AGGVVDVLERWSIIRSAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWF--QEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEGLP----------------------------LALAR----MNALVRSGLEADLDDADSLSSVAATA-LEFRPGDRALAETLL------------RRSLDVKEAILGPEHLQVADTLRQLGVSAREAG 752

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BLAST of mRNA_C-linearis_contig10.520.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 442 bits (1136), Expect = 4.510e-136
Identity = 309/843 (36.65%), Postives = 436/843 (51.72%), Query Frame = 1

Query:    1 EVARVALEMGSTVADIVEFMHELGGEVPVVGAVLITLKAIREKVETVQSNMEGLKALEERCTYVTARVVVKWRQNSSSEMDVAPLESCVNAAEDFIERCSQRGWCGRCTKASSDKDELAALNARVDSLVGDVGLVALATL--------------------------DAKVDDLKATLAEAIPQNQTPATVPVAAVPKGKPAEQSWHVARDRVVNAVYEHLSSGQMPQVVGLVGRSGSGKTTCAASIVGEPKGVSSRRQSETGDQMLRRLNRVREHFRDGVVWLRVGRGAGSADRAPALMSHLAKTVFEELAHSYGFAPGGHDPRDGSTFIRDFVRGTGGAARPKRCLIVADDVWEVDILEELRHTGMWVLFTTRDPRLVERVEGSVVPVDQLSKAEAESLLRGAAELSTGSSLPSAAAKIIERCDRMANHLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEAEAQKNDEGLPEVKRVAILRAGFLDLAAQNGFNPL--LYLSLAVMPDGRAFGAKEAAVLLYD--DGADDGASQRRTRQAAKVVANLEQWAVVTMHGDLFRMHDAHTDFARNKLKKSEDVRAPAVRRWRGFISTLATVRSTDYFELVDLWHATETVGGESWRVSRPYHVALDSIPDSSSECI-PSLKAVVQFGINECAWDITHDVALRLLRVQK-DAAVGHAELRHTLESLIHCANAL-NLNSGADAHRRELSSMVDAAWEERSHTANSPPRLVAEQLLERGQQLAITRRPDEAHEAISEALRIQQDG--GGDFERLEISATLEFLAIVLVDLK--RYNEGVEVYQRCLRIKENLYGHEHLRLTVTLHNLAVCALKRG 2418
            EVA++A +MGS  AD+++F+ +LG E+P++  VL TL+ IREKVETV+ N E L  L +RCTY+TA  +VK R +  +E+DVAPLE CVNA E F+ER  +RG   R  KA  DK ++  L  R+  L GD+ L  +A+L                          +   ++L A     + Q   P    VA VPKG P  +SWHV R  V   V++ L +   P +VGLVG SG+GKTT A++IV                        VRE F DG+VWL V  G    D  P LM  LA+ VFE++  S G  P G D  DG  +++  V   G   +  +CL+VAD+VWE D++ +L  TGMW+L +TRD  LV+R  G VV VD+LS+AEAES+LR AAELS  + LP  A  +IE C R+A  L FVGRWSTV+G  D   W++A   + AEM      AE+  +++     +R AIL+AGF DLA  +    +  LYLSLAV+PDG AF  K+AAVLLYD   G +D AS         VV  LE+W ++      +RMHDAH++FAR  L    DVR PA++R    IS+L  +RS + + L  LW   + VGG+ W  +RPY  AL+++ +S+S     +++AV  F   +  W   +    RLL V++      H  + +T   L  CA    N+    + HR++                                           H+A+  A+   Q    G +   L+ + +L  LA  ++ L      E   + +R L IK      + +++ V  H+L VC  + G
Sbjct:   11 EVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCR-HGYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKP-PAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIV--------------------VRETFSDGIVWLPVNEGVH--DNLPCLMLQLAQMVFEDIGGSVGRRPSGSD--DGLAYVKQQVE-NGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRR-AILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEAS------VGGVVEALERWTIIRSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQ-------------------------------------------HQALPLAMARAQSKHVGSEAAGLDDAGSLASLAATVITLHPGERGEAEMLLRRSLEIKMAELDQDDVQVAVVQHDLGVCIREAG 776

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BLAST of mRNA_C-linearis_contig10.520.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 3.780e-133
Identity = 294/685 (42.92%), Postives = 389/685 (56.79%), Query Frame = 1

Query:    1 EVARVALEMGSTVADIVEFMHELGGEVPV-------VGAVLITLKAIREKVETVQSNMEGLKALEERCTYVTARVVVKWRQNSSSEMDVAPLESCVNAAEDFIERCSQRGWCGRCTKASSDKDELAALNARVDSLVGDVGLVALATLDAKVDDLKATLAEAIPQNQ--------------------TPATVPVAAVPKGKPAEQSWHVARDRVVNAVYEHLSSGQMPQVVGLVGRSGSGKTTCAASIVGEPKGVSSRRQSETGDQMLRRLNRVREHFRDGVVWLRVGRGAGSADRAPALMSHLAKTVFEELAHSYGFAPGGHDPRDGSTFIRDFV-RGTGGAARPKRCLIVADDVWEVDILEELRHTGMWVLFTTRDPRLVERVEGSVVPVDQLSKAEAESLLRGAAELSTGSSLPSAAAKIIERCDRMANHLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEAEAQKNDEGLPEVKRVAILRAGFLDLAAQNGFNPL--LYLSLAVMPDGRAFGAKEAAVLLYD--DGADDGASQRRTRQAAKVVANLEQWAVVTMHGDLFRM---------HDAHTDFARNKLKKSEDVRAPAVRRWRGFISTLATVRSTDYFELVDLWHATETVGGESWRVSRPYHVALDSIPDSSSECIPSLKAVVQFGINECAWDITHDVALRLL 1932
            EV ++ L+MGS   D + FM ELG ++P        +  VL TL AIRE VE VQ+N E L+ L  RC Y+TA VVVK RQ+S SEMD+ P+E C+ AA + +ERC  RG   R   ASSDK+E+A + A +  L  D+ L  +A L+ K  DL A + E +  NQ                    TPA +  A +PK  P  +SWHV R  V+  V+E L++   P +VGLVG SGSGKTT A+ IV                    R N VR+ F DGVVWL V  GA   DR P+LM  LA  + EE+    G  P   D  DG+ +I++ + RG GG  +  +CL+VAD+VWE +++ +L  TGMWVL +TRD  LV   EG VV VD++S+ EAES+LR A+EL   + LP  A  +IE C R+A  L FVGRWSTV+G  D   W++A   + AEM  + GE  +    E   + +R A+L+AGF DLA+ +    +  LYLSLAV+PDGR F  K+AAVLLYD    A+D AS      AA VV  LE+W+V+      +RM         HDAH+DFAR KL    DVR PA+ RW   IS+L T+RS  + ++ DLW   E VGG+ W+ +RPY  AL  + DS      S+ AV +F  +E  W+       RLL
Sbjct:   11 EVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTA-MVERMGTNQAATQEMILANTESIIDRLSKTPAKL--AKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIV--------------------RSNEVRQAFSDGVVWLTVNHGA--KDRLPSLMLQLAHMMCEEVG---GRRPATSD--DGAAYIKEKMQRGHGG--KGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVE-TRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEAS------AAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLL 656

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BLAST of mRNA_C-linearis_contig10.520.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 1.500e-126
Identity = 274/706 (38.81%), Postives = 384/706 (54.39%), Query Frame = 1

Query:   28 GSTVADIVEFMHELGGEVPVVGAVLITLKAIREKVETVQSNMEGLKALEERCTYVTARVVVKWRQNSSSEMDVAPLESCVNAAEDFIERCSQRGWCGRCTKASSDKDELAALNARVDSLVGDVGLVALATLDAKVDDLKATLA-----EAIPQNQTPATVPV------------AAVPKGKPAEQSWHVARDRVVNAVYEHLSSGQMPQVVGLVGRSGSGKTTCAASIVGEPKGVSSRRQSETGDQMLRRLNRVREHFRDGVVWLRVGRGAGSADRAPALMSHLAKTVFEELAHSYGFAPGGHDPRDGSTFIRDFVRGTGGAARPKRCLIVADDVWEVDILEELRHTGMWVLFTTRDPRLVERVEGSVVP-VDQLSKAEAESLLRGAAELSTGSSLPSAAAKIIERCDRMANHLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEAEAQKNDEGLPEVKRVAILRAGFLDLAAQNGFN--PLLYLSLAVMPDGRAFGAKEAAVLLYDDGA--DDGASQRRTRQAAKVVANLEQWAVVTMHGDLFRMHDAHTDFARNKLKKSEDVRAPAVRRWRGFISTLATVRS-TDYFELVDLWHATETVGGESWRVSRPYHVALDSIPDSSSECIPSLKAVVQFGINECAWDITHDVALRLLRVQK-DAAVGHAELRHTLESLIHCANALNLNSGADAHRRELSSMVDAA 2073
            G+  +D++ F+ E    +P++  VL TLKA+               AL +RCTY+T  V+V+ R+ SS  +   PL  CVNA   F+ERCS+RG   R  KA+ DK+E+A L  R++ L GD+ L  +AT+  KV+DLKA L      +A+  +QT A   +            A VP G PA +SWHV R  V+ AV + L     P++VGLVG SGSGKTT AA IV                    R   VRE F DG+VWL V  GA   +R  ALM HLA+ VFE++  S G  P G D  DG+ + R  ++ +G   +  +CL+VAD+VWE  ++ +L  TGMWVL +TRD  LV   EG VV  VD+LS+ +A S+LR A+ELS    LP  A +++E C R+A  + FVGRWSTV+G  D   W++A   + +++           N   +  V+R A+L+AGF DLA  +     P LYLSLAV+PDG AF AK+A  LLYD     +D  S        +++  LE+W+ +   G  +RMHDAH+ FAR+ +     VR PAV+RW   +S+L  +RS  D F L  LW A   +GGESWR  RPY  AL  + +S+   + SL+++  F   +  W    D   R+L V++      H     TL +L++CA  L         + EL  ++  A
Sbjct:    6 GTMASDVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKGSSG-LKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIV--------------------RSTEVREAFSDGIVWLSVNDGA--TERLRALMMHLARVVFEDIGGSVGRRPAGLD--DGAAYTRQRMQ-SGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERS----RVSDNVWDIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTE------ELIRTLERWSALRTEGGAYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPLA 675

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BLAST of mRNA_C-linearis_contig10.520.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 1.040e-110
Identity = 243/621 (39.13%), Postives = 352/621 (56.68%), Query Frame = 1

Query:    1 EVARVALEMGSTVADIVEFMHELGGEVPVVGAVLITLKAIREKVETVQSNMEGLKALEERCTYVTARVVVKWRQNSSSEMDVAPLESCVNAAEDFIERCSQRGWCGRCTKASSDKDELAALNARVDSLVGDVGLVALATLDAKVDDLKATLAEAIPQNQTPATVPVAAVPKGKPAEQSWHVARDRVVNAVYEHLSSGQMPQVVGLVGRSGSGKTTCAASIVGEPKGVSSRRQSETGDQM---LRRLNRVREHFRDGVVWLRVGRGAGSADRAPALMSHLAKTVFEELAHSYGFAPGGHDPRDGSTFIRDFVRGTGGAARPKRCLIVADDVWEVDILEELRHTGMWVLFTTRDPRLVERVEGSVVPVDQLSKAEAESLLRGAAELSTGSSLPSAAAKIIER-CDRMANHLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEAEAQKNDEGLPEVKRVAILRAGFLDLAAQNG-FNPLLYLSLAVMPDGRAFGAKEAAVLLYDDGADDGASQRRTRQAAKVVANLEQWAVVTMHGD-LFRMHDAHTDFARNKLKKSEDVRAPAVRRWRGFISTLATVRSTDYFELVDLWHATETVGGESWRVSRPYHVALDSIPDSSSE 1845
            E AR+ +   + V  +   + E+G   PVV  + + L   +  V+    N E L  L ERC  +T +V+ K + +++S +DV+PL+ CV+  ++  +R   +G   R  +   D D++  L AR++++V  +GL  +  +  +++D++  LA   P+ +      +A VP G PA ++WH  RD V + VY+ LS G  P V  L G+SG+GK+T AA +V   K        ET DQ    + RL RVR  F DGVV+LRVG+G G+ADR P LM  LAK + E++      AP   +   G ++++  +  T      KRCL+VADDVWE  ++ +L+ TGMWVL TTR P +VE  EG  V VDQL+ AEAE +LRGAAEL  G  L   A ++++  C  +A  + FVG WS V+ +DD   WAEAVS I+  +  +  +A+   + +    VKR+ ILRAGF  L  + G     LY+++AV PDG AFG  +AAVLL D    D A     + A++ +  LE+WAV+TM+    +RMHD H DFAR+K++   DVR P VRRW   IS L      D + L D+W A E VGG+ W   RPY   L S+    S+
Sbjct:   91 ETARLGIS--TVVESVATGIIEIGAATPVVAPLCVALLKAKGIVDGASRNKEELGELCERCDLITVQVIDKAKASNTSTIDVSPLQGCVDKLDEVAKRYHDQGCLARLAQFRRDGDDIQRLRARIEAIVPIMGLAGVVNIMDRLEDVRQILARLQPRPRPK----LAPVPPGLPAGEAWHAVRDHVEDEVYKILS-GDEPAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEAGEK--GESYVKKMMTRT-----KKRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVEPNEG--VDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDSGAWAEAVSKINDTIVDVREDADGMNDSQ----VKRLGILRAGFDYLGEEEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHM-KVASRAIEILERWAVLTMNASGKYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRISRLDFAVGRDVYALSDIWRAVEWVGGDGWFDLRPYDKELVSMGSDCSK 690

[Close]

BLAST of mRNA_C-linearis_contig10.520.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 7.990e-103
Identity = 249/644 (38.66%), Postives = 340/644 (52.80%), Query Frame = 1

Query:    1 EVARVALEMGSTVADIVEFMHELGGEVPVVGAVLITLKAIREKVETVQSNMEGLKALEERCTYVTARVVVKWRQNSSSEMDVAPLESCVNAAEDFIERCSQRGWCGRCTKASSDKDELAALNARVDSLVGDVGLVALATLDAKVDDLKATL-----------------AEAIPQNQTPATVPVAAVPKGKPAEQSWHVARDRVVNAVYEHLSSGQMPQVVGLVGRSGSGKTTCAASIVGEPKGVSSRRQSETGDQMLRRLNRVREHFRDGVVWLRVGRGAGSADRAPALMSHLAKTVFEELAHSYGFAPGGHDPRDGSTFIRDFV-RGTGGAARPKRCLIVADDVWEVDILEELRHTGMWVLFTTRDPRLVERVEGSVVPVDQLSKAEAESLLRGAAELSTGSSLPSAAAKIIERCDRMANHLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEAEAQKNDE-GLPEVKRVAILRAGFLDLAAQNGFNPL--LYLSLAVMPDGRAFGAKEAAVLLYD--DGADDGASQRRTRQAAKVVANLEQWAVVTMHGDLFRM---------HDAHTDFARNKLKKSEDVRAPAVRRWRGFISTLATVRSTDYFELVDLWHATETVGGESWRVSRPYHVALDSIPDS 1836
            EV ++AL+MGS   D + F+ +L  ++P                     N E L+ L  RC ++T  V+VK RQ+S SEMDV+P+E C+ AA + +ERC  RG   R   ASSDKD++A + A +  L  ++ L  +A L+ K  DL+AT+                  E I    +      A +PK  P  +SWHV R  VV  V+E L++   P +VGLVG SGSGKTT A+ IV         R +E                                DR P+LM  LA  V+EE+    G  P   D  DG+ +I++ + RG GG     +CL V D+VWE +++ EL   GMWVL +TRD  LV   EG VV V++LS+ EAES+LR AAEL   + LP  A  +IE C R+A  L F GR STV+G  D   W++A S +  EMS   GE E  +       + +R A+++AGF DLA  +    +  LYLSLAV+PDGR F  K+AAVL+YD    A+D AS      AA VV  LE+W+ +      +RM         HDAH+DFAR KL    DV  PA+ RW   IS++ T+R+  + E+ DLW   E VGG+ W+++RPY  AL  + DS
Sbjct:   11 EVTKLALKMGSATVDSITFVADLCEDLPF-------------------ENQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIV---------RSNE--------------------------------DRLPSLMLQLAHMVYEEIG---GRRPATSD--DGTAYIKERMHRGHGGEGL--KCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSK--GECEGVRGTVVETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEAS------AAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDS 579

[Close]

BLAST of mRNA_C-linearis_contig10.520.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 1.730e-91
Identity = 236/647 (36.48%), Postives = 326/647 (50.39%), Query Frame = 1

Query:  505 VPKGKPAEQSWHVARDRVVNAVYEHLSSGQMPQVVGLVGRSGSGKTTCAASIVGEPKGVSSRRQSETGDQMLRRLNRVREHFRDGVVWLRVGRGAGSADRAPALMSHLAKTVFEELAHSYGFAPGGHDPRDGSTFIRDFVR-GTGGAARPKRCLIVADDVWEVDILEELRHTGMWVLFTTRDPRLVERVEGSVVPVDQLSKAEAESLLRGAAELSTGSSLPSAAAKIIERCDRMANHLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEAEAQKNDEGLPEVKRVAILRAGFLDLAAQNGFNPL--LYLSLAVMPDGRAFGAKEAAVLLYDDG--ADDGASQRRTRQAAKVVANLEQWAVVTMHGDLFRMHDAHTDFARNKLKKSEDVRAPAVRRWRGFISTLATVRSTDYFELVDLWHATETVGGESWRVSRPYHVALDSIPDSSSECIPSLKAVVQFGINECA--WDITHDVALRLLRVQK-DAAVGHAELRHTLESLIHCANALN-LNSGADAHRRELSSMVDAAWEERSHTANSPPRLVAEQLLERGQQLAITRRPDEAHEAISEALRIQQDGGGDFERLEISATLEFLAIVLVDLKRYNEGVEVYQRCLRIKENLYGHEHLRLTVTLHNLAVCALKRG 2418
            VPKG PA +SW+V R  V++ V+E L+S   P++VGLVG SGSGKTT A+  V                    R   V+E F DG+ WL V  GA   +R  +LM  LA+ V+E++  S G  P   D  D + +IR  ++ GTGG  +  +CL+VAD+VWE +++ +L  TGMWVL +TR+  LV    G VV VD+LS+A+A S+LR AAEL     +P  A  +IE C R+A  L FVGRWSTV+G  D   W++AVS +  EM  + G  +A +      + +R AILRAGF DLA  +    +  LYLSLAV PDG AF  ++AAVLLYD    A+D AS       A VV  LE+W V+      +RMHDAH+ FAR  L     VR PAV+RW   IS L  +RS+D + L  LW A E VGG+ W  SR Y  AL  + D     +     +    + E    W+       RLL ++K      H  +  +  SL  CA  L  +   AD   +E+ ++  A    +S T +     +                 D A+   S A  + +   G  +R +    L                    +R L I+E   GHE + +  TL+ L +C  + G
Sbjct:   36 VPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESV--------------------RSTEVQEAFSDGIAWLSVNDGA--KERLSSLMLQLARVVYEDIGCSVGRRPTSSD--DCAAYIRQRMKKGTGG--KKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKV-GSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEAS------VAVVVDTLERWTVLRSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGM-DRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVEGL-----------------DGANGLASVASTMLKFKPGSIDRAQAEVLL--------------------RRSLEIQEAALGHEDIAVADTLYQLGICLREAG 611

[Close]

BLAST of mRNA_C-linearis_contig10.520.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 3.590e-91
Identity = 218/587 (37.14%), Postives = 310/587 (52.81%), Query Frame = 1

Query:   64 ELGGEVPVVGAVLITLKAIREKVETVQSNMEGLKALEERCTYVTARVVVKWRQNSSSEMDVAPLESCVNAAEDFIERCSQRGWCGRCTKASSDKDELAALNARVDSLVGDVGLVALATLDAKVDDLKATLAEAIPQNQTPATVPVAAVPKGKPAEQSWHVARDRVVNAVYEHLSSGQMPQVVGLVGRSGSGKTTCAASIVGEPKGVSSRRQSETGDQMLRRLNRVREHFRDGVVWLRVGRGAGSADRAPALMSHLAKTVFEELAHSYGFAPGGHDPRDGSTFIRDFVRGTGGAARPKRCLIVADDVWEVDILEELRHTGMWVLFTTRDPRLVERVEGSVVPVDQLSKAEAESLLRGAAELSTGSSLPSAAAKIIERCDRMANHLEFVGRWSTVKGSD----DEEDWAEAVSAIDAEMSAMAGEAEAQKNDEGLPE-VKRVAILRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAVLLYDDGADDGASQRRTRQAAKVVANLEQWAVV-TMHGDLFRMHDAHTDFARNKLKKSEDVRAPAVRRWRGFISTLATVRSTDYFELVDLWHATETVGGESWRVSRPY 1806
            E+G   PVV  +   L   +  V+    N E L+ L ERC  +T +V+ K + + +S +DV PL+ CV+  ++  ER   RG   R  +   D +++  L  R++ +V  +GL  +     K+D + A L         P   PV   PK  P  +S+HV RD VV+ V + L     P +  L G SG+GKTT AA++VGE                  R +RVR  F DGVVWL VGR AG+ADR P+LMS+LAK + E++      AP G D   G +++R  V     +    RCL+VADDVWE  ++++LR TGMWVL TTR P + E  E  V+  D L  AEAE +LRGAAEL  G  L  A+ K++E C R+A    FVG W++V+ ++      + W   V  + A++  + G+ +     E     + R+A+LRAGF  +  ++     LY+ LAV P+G  FG  +AAVLL ++    G            ++ LE+W V+ T   + +R HDAH DFAR KL    D+R PAV RW   IS L      + F L+ +W A E VGG+ W   RPY
Sbjct:   32 EIGASAPVVAPLCTALLKAKGVVDAASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQILARL------QPGPKLAPV---PKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGE------------------RGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPTGDD---GVSYVRKIV-----SQEKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEMGEPEERVVM--DTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLLENEEVAKGP-----------ISILERWGVLRTDASEKYRTHDAHADFARKKLMDRNDLREPAVERWTEHISRLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPY 570

[Close]

BLAST of mRNA_C-linearis_contig10.520.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 1.370e-84
Identity = 220/593 (37.10%), Postives = 303/593 (51.10%), Query Frame = 1

Query:  118 IREKVETVQSNMEGLKALEERCTYVTARVVVKWRQ-NSSSEMDVAPLESCVNAAEDFIERCSQRGWCGRCTKASSDKDELAALNARVDSLVGDVGLVALATLDAKVDDLKATLAEAIPQNQTPATVPVAAVPKGKPAEQSWHVARDRVVNAVYEHLSSGQMPQVVGLVGRSGSGKTTCAASIVGEPKGVSSRRQSETGDQMLRRLNRVREHFRDGVVWLRVGRGAGSADRAPALMSHLAKTVFEELAHSYGFAPGGHDPRDGST---FIRDFVRGTGGAARPKRCLIVADDVWEVDILEELRHTGMWVLFTTRDPRLVERVEGSVVPVDQLSKAEAESLLRGAAELSTGSSLPSAAAKIIERCDRMANHLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEAEAQKNDEGLPEVKRVAILRAGFLDLAAQNGFNPL--LYLSLAVMPDGRAFGAKEAAVLLYDDGADDGASQRRTRQAAKVVANLEQWAVV-TMHGDLFRMHDAHTDFARNKLKKSEDVRAPAVRRWRGFISTLATVRSTDYFELVDLWHATETVGGESWRVSRPYHVALDSIPDSSSECIPSLKAVVQ 1875
            +RE VETV    + L ALE+RCTY+TA ++ K+R  +  S  +V+PLE CV  AE F+ER  +R         ++ + EL                  LA  +  +D L                +  A VP+G P  +SWHV R  V   V E L+    P++VGLVG SG+GKTT AA +V                    R N VRE F DG+VWL V  GA    R P+LM  LA+ V E++    G   GGH    G     +I+  +   G   +  +CL VAD+VWE +++  L  TGM VL +TR   LV    G  V +D+LS  +AES+LR AAEL     LP  A  +I+ C R+A  L FVGRWSTV+G  D   W++A + + AE++ + G+       +G    +R AIL+AG  DLA  +    +  LYLSLAV+PD +     +AA+LLYD   D  A    +   A+V+  LE+W+V+ +     + MHD  ++FAR  L    DVR  A+RRW G+IS+L TVRS +   L   W   E VGGE W  + P   AL  + D       S+ AV +
Sbjct:    1 MRETVETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVERRKKRTMEQMVQNQAAARKEL------------------LANQEIIIDRLPKP------------PIKKAYVPQGTPTRKSWHVER-HVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELV--------------------RSNVVRESFSDGIVWLTVNYGANK--RLPSLMLQLARMVQEDI----GGRVGGHPNESGGNADAYIKQRME-NGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGD----DIVDGARGNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDR--DPTAEDEES--VARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPEPLLQESIAAVAK 527

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig10.520.1 vs. uniprot

BLAST of mRNA_C-linearis_contig10.520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
D8LFN6_ECTSI	0.000e+0	84.75	NB-ARC and TPR repeat-containing protein n=1 Tax=E...	[more]
D7FZW8_ECTSI	7.860e-145	40.07	NB-ARC and TPR repeat-containing protein n=1 Tax=E...	[more]
A0A6H5KRK8_9PHAE	4.510e-136	36.65	NB-ARC domain-containing protein n=2 Tax=Ectocarpu...	[more]
D7FZY7_ECTSI	3.780e-133	42.92	NB-ARC and TPR repeat-containing protein n=1 Tax=E...	[more]
A0A6H5KLK9_9PHAE	1.500e-126	38.81	NB-ARC domain-containing protein n=2 Tax=Ectocarpu...	[more]
A0A6H5KE50_9PHAE	1.040e-110	39.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KJ30_9PHAE	7.990e-103	38.66	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KYW3_9PHAE	1.730e-91	36.48	NB-ARC domain-containing protein n=2 Tax=Ectocarpu...	[more]
A0A6H5JSI2_9PHAE	3.590e-91	37.14	NB-ARC domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5J759_9PHAE	1.370e-84	37.10	NB-ARC domain-containing protein n=1 Tax=Ectocarpu...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	1342.8
Seed ortholog evalue	0.0
Seed eggNOG ortholog	2880.D8LFN6
Hectar predicted targeting category	other localisation
EggNOG free text desc.	determination of stomach left/right asymmetry
EggNOG OGs	COG0457@1,KOG1840@2759
Ec32 ortholog description	NB-ARC and TPR repeat-containing protein
Ec32 ortholog	Ec-04_001460.1
COG Functional cat.	C
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	2
Model size	2640
Cds size	2616
Stop	1
Start	1

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig10:1738980..1742038+
coding sequence from alignment at C-linearis_contig10:1738980..1742038+

protein sequence of mRNA_C-linearis_contig10.520.1

>prot_C-linearis_contig10.520.1 ID=prot_C-linearis_contig10.520.1|Name=mRNA_C-linearis_contig10.520.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=872bp
MGSTVADIVEFMHELGGEVPVVGAVLITLKAIREKVETVQSNMEGLKALE
ERCTYVTARVVVKWRQNSSSEMDVAPLESCVNAAEDFIERCSQRGWCGRC
TKASSDKDELAALNARVDSLVGDVGLVALATLDAKVDDLKATLAEAIPQN
QTPATVPVAAVPKGKPAEQSWHVARDRVVNAVYEHLSSGQMPQVVGLVGR
SGSGKTTCAASIVGEPKGVSSRRQSETGDQMLRRLNRVREHFRDGVVWLR
VGRGAGSADRAPALMSHLAKTVFEELAHSYGFAPGGHDPRDGSTFIRDFV
RGTGGAARPKRCLIVADDVWEVDILEELRHTGMWVLFTTRDPRLVERVEG
SVVPVDQLSKAEAESLLRGAAELSTGSSLPSAAAKIIERCDRMANHLEFV
GRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEAEAQKNDEGLPEVKRVAI
LRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAVLLYDDGADDGAS
QRRTRQAAKVVANLEQWAVVTMHGDLFRMHDAHTDFARNKLKKSEDVRAP
AVRRWRGFISTLATVRSTDYFELVDLWHATETVGGESWRVSRPYHVALDS
IPDSSSECIPSLKAVVQFGINECAWDITHDVALRLLRVQKDAAVGHAELR
HTLESLIHCANALNLNSGADAHRRELSSMVDAAWEERSHTANSPPRLVAE
QLLERGQQLAITRRPDEAHEAISEALRIQQDGGGDFERLEISATLEFLAI
VLVDLKRYNEGVEVYQRCLRIKENLYGHEHLRLTVTLHNLAVCALKRGEP
GDVEMASELLRRALNIKEAKTGEDHVGMVRTLHWLRRCAEQAGKPDEEKL
YKERIKRLEDATTKGNESAPV*

mRNA from alignment at C-linearis_contig10:1738980..1742038+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig10.520.1 ID=mRNA_C-linearis_contig10.520.1|Name=mRNA_C-linearis_contig10.520.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3059bp|location=Sequence derived from alignment at C-linearis_contig10:1738980..1742038+ (Chordaria linearis ClinC8C monoicous)
GAGGTCGCCAGGGTTGCCCTGGAGATGGGATCGACCGTGGCGGACATCGT
TGAGTTTATGCACGAGTTGGGCGGTGAGGTTCCTGTGGTTGGCGCCGTGC
TGATAACCCTGAAAGCCATCCGTGAGAAAGTTGAGACCGTTCAAAGCAAT
ATGGAGGGGCTGAAAGCACTAGAAGAGCGGTGCACGTACGTGACGGCGCG
CGTTGTCGTCAAGTGGAGGCAAAACTCGAGCTCGGAGATGGATGTAGCCC
CGCTGGAATCCTGCGTCAACGCCGCTGAGGATTTCATCGAGCGCTGTAGC
CAGCGAGGGTGGTGTGGGCGTTGTACCAAGGCCTCAAGCGACAAAGACGA
GCTTGCGGCCTTGAACGCGCGTGTCGACAGCCTGGTCGGAGATGTGGGCC
TCGTGGCCCTTGCCACCCTGGACGCAAAGGTGGATGACTTGAAGGCGACG
TTGGTAAGTTTTTCACGATTCGTGTCCGTTCACCATACTCTTCTCCCACC
TGGCCCGGCTAGCCCCCAGAAGTTTTGAATGAGCACTGGTCGCTGTCCTG
CAGTGGCACCAATCTCTAATTTAGTGCTGCTATGCGGGGTTCGATTGGGT
TTTTATCTTACGAAGTCTGCGCGGGAATATTACCGGAGGATGCCTATGCC
CAAGCCGAGCATCAGCTTGAAGTCGTGGTTTAGGGCGGTCGGATGTGTTT
CTGATTCGCACACCTCGTGTAGCATCGTAAGAACTTGACGGCGCACTCTC
ACACCTTGTACTGAAGTACGATGAACGGCCGTTGAGGCACAAGAAACGTG
ACGTTATACTTCGAAGTAGCCTAAAACGGCCCCAAAAATTACCGTGCGTG
GTGCTCATGTGCAACGGGACAGGCGGAGGCGATTCCACAGAACCAGACGC
CAGCCACTGTCCCGGTGGCCGCGGTGCCAAAAGGGAAGCCAGCCGAACAG
TCCTGGCACGTCGCCCGCGATAGGGTCGTGAATGCCGTGTACGAACACCT
CTCTTCCGGGCAAATGCCACAAGTGGTGGGGCTAGTCGGTCGGAGTGGCT
CAGGAAAGACCACGTGCGCCGCGTCTATCGTCGGAGAGCCCAAGGGAGTC
AGCTCACGCCGTCAGAGCGAAACCGGGGACCAAATGCTTCGGCGCCTAAA
CCGGGTTCGGGAGCACTTCCGTGACGGGGTGGTGTGGCTACGGGTTGGCA
GGGGAGCCGGGTCCGCGGATCGCGCTCCTGCCCTAATGTCACATCTGGCG
AAGACTGTGTTCGAAGAGCTCGCGCACAGTTACGGGTTTGCCCCCGGAGG
TCATGATCCTCGCGATGGCTCGACCTTCATCCGTGACTTTGTTCGAGGGA
CAGGCGGGGCCGCGAGACCAAAACGCTGTCTAATCGTTGCCGATGATGTC
TGGGAAGTCGACATTTTGGAGGAGCTGCGGCACACCGGCATGTGGGTTCT
TTTTACGACTCGTGACCCTCGCTTGGTGGAGAGAGTGGAAGGCAGCGTAG
TCCCCGTCGACCAACTTTCGAAGGCTGAAGCAGAATCGCTTCTCCGCGGC
GCTGCCGAGCTGTCGACTGGTTCCAGCCTCCCGTCAGCGGCGGCCAAGAT
CATCGAGCGGTGCGACCGGATGGCAAACCACTTGGAGTTTGTCGGCCGAT
GGAGTACTGTGAAGGGCAGCGACGATGAAGAGGACTGGGCGGAGGCTGTC
TCGGCCATCGACGCCGAGATGAGTGCGATGGCTGGCGAAGCGGAGGCGCA
AAAGAACGACGAGGGTCTCCCAGAGGTCAAGCGTGTCGCTATCCTTCGCG
CTGGCTTCCTCGATCTCGCTGCCCAAAACGGCTTCAACCCTTTGCTCTAC
CTCAGCCTTGCGGTCATGCCCGACGGCCGTGCTTTCGGGGCGAAAGAAGC
GGCCGTGCTTCTCTACGACGACGGAGCCGACGACGGTGCTAGCCAGCGTA
GGACCAGGCAGGCGGCGAAGGTCGTGGCCAACCTCGAACAGTGGGCTGTG
GTCACGATGCATGGGGACTTGTTTCGGATGCACGACGCCCACACAGACTT
CGCGAGGAACAAGCTCAAGAAGAGCGAGGACGTGCGCGCGCCGGCCGTGA
GGCGATGGCGCGGCTTCATCTCCACGCTAGCCACTGTGCGTTCCACGGAC
TACTTTGAGCTGGTGGATCTTTGGCACGCTACAGAGACGGTAGGAGGAGA
GAGTTGGCGCGTGTCACGCCCGTACCACGTTGCTCTGGATTCTATCCCAG
ACTCCAGTTCTGAGTGCATACCCTCTCTGAAGGCCGTGGTCCAGTTCGGG
ATCAACGAATGTGCATGGGACATCACTCATGACGTTGCGCTCCGGCTGCT
CCGCGTGCAGAAAGATGCGGCGGTGGGACACGCAGAGTTGCGACACACGT
TGGAATCGCTCATCCATTGTGCGAATGCCTTAAATCTAAACAGCGGTGCG
GATGCTCATCGTCGTGAGCTCTCGTCGATGGTGGACGCCGCCTGGGAGGA
ACGATCGCATACAGCCAACTCTCCGCCGAGGCTTGTTGCGGAGCAGTTAT
TGGAACGCGGCCAGCAATTGGCAATCACAAGACGGCCCGACGAGGCGCAT
GAGGCTATCAGCGAAGCTTTGCGGATCCAACAAGACGGTGGTGGAGACTT
TGAAAGGCTGGAGATATCGGCAACGTTGGAGTTTCTAGCCATTGTTCTGG
TGGACCTCAAGCGGTACAACGAAGGTGTGGAGGTCTACCAGCGATGTCTC
CGTATCAAAGAAAATCTCTACGGACACGAGCACTTACGGCTGACAGTGAC
GCTGCATAACTTGGCTGTTTGTGCACTAAAACGGGGGGAACCGGGCGACG
TAGAAATGGCCAGTGAGCTTCTTCGGCGTGCCCTCAACATCAAGGAAGCG
AAAACAGGAGAGGACCACGTGGGGATGGTCCGAACTTTACATTGGCTCCG
CAGATGTGCGGAACAAGCGGGCAAGCCCGACGAGGAAAAGCTCTACAAGG
AACGCATCAAAAGACTCGAAGATGCGACCACCAAAGGCAACGAGTCGGCG
CCGGTATAG

Coding sequence (CDS) from alignment at C-linearis_contig10:1738980..1742038+

>mRNA_C-linearis_contig10.520.1 ID=mRNA_C-linearis_contig10.520.1|Name=mRNA_C-linearis_contig10.520.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5232bp|location=Sequence derived from alignment at C-linearis_contig10:1738980..1742038+ (Chordaria linearis ClinC8C monoicous)
ATGGGATCGACCGTGGCGGACATCGTTGAGTTTATGCACGAGTTGGGCGG
TGAGGTTCCTGTGGTTGGCGCCGTGCTGATAACCCTGAAAGCCATCCGTG
AGAAAGTTGAGACCGTTCAAAGCAATATGGAGGGGCTGAAAGCACTAGAA
GAGCGGTGCACGTACGTGACGGCGCGCGTTGTCGTCAAGTGGAGGCAAAA
CTCGAGCTCGGAGATGGATGTAGCCCCGCTGGAATCCTGCGTCAACGCCG
CTGAGGATTTCATCGAGCGCTGTAGCCAGCGAGGGTGGTGTGGGCGTTGT
ACCAAGGCCTCAAGCGACAAAGACGAGCTTGCGGCCTTGAACGCGCGTGT
CGACAGCCTGGTCGGAGATGTGGGCCTCGTGGCCCTTGCCACCCTGGACG
CAAAGGTGGATGACTTGAAGGCGACGTTGATGGGATCGACCGTGGCGGAC
ATCGTTGAGTTTATGCACGAGTTGGGCGGTGAGGTTCCTGTGGTTGGCGC
CGTGCTGATAACCCTGAAAGCCATCCGTGAGAAAGTTGAGACCGTTCAAA
GCAATATGGAGGGGCTGAAAGCACTAGAAGAGCGGTGCACGTACGTGACG
GCGCGCGTTGTCGTCAAGTGGAGGCAAAACTCGAGCTCGGAGATGGATGT
AGCCCCGCTGGAATCCTGCGTCAACGCCGCTGAGGATTTCATCGAGCGCT
GTAGCCAGCGAGGGTGGTGTGGGCGTTGTACCAAGGCCTCAAGCGACAAA
GACGAGCTTGCGGCCTTGAACGCGCGTGTCGACAGCCTGGTCGGAGATGT
GGGCCTCGTGGCCCTTGCCACCCTGGACGCAAAGGTGGATGACTTGAAGG
CGACGTTGGCGGAGGCGATTCCACAGAACCAGACGCCAGCCACTGTCCCG
GTGGCCGCGGTGCCAAAAGGGAAGCCAGCCGAACAGTCCTGGCACGTCGC
CCGCGATAGGGTCGTGAATGCCGTGTACGAACACCTCTCTTCCGGGCAAA
TGCCACAAGTGGTGGGGCTAGTCGGTCGGAGTGGCTCAGGAAAGACCACG
TGCGCCGCGTCTATCGTCGGAGAGCCCAAGGGAGTCAGCTCACGCCGTCA
GAGCGAAACCGGGGACCAAATGCTTCGGCGCCTAAACCGGGTTCGGGAGC
ACTTCCGTGACGGGGTGGTGTGGCTACGGGTTGGCAGGGGAGCCGGGTCC
GCGGATCGCGCTCCTGCCCTAATGTCACATCTGGCGAAGACTGTGTTCGA
AGAGCTCGCGCACAGTTACGGGTTTGCCCCCGGAGGTCATGATCCTCGCG
ATGGCTCGACCTTCATCCGTGACTTTGTTCGAGGGACAGGCGGGGCCGCG
AGACCAAAACGCTGTCTAATCGTTGCCGATGATGTCTGGGAAGTCGACAT
TTTGGAGGAGCTGCGGCACACCGGCATGTGGGTTCTTTTTACGACTCGTG
ACCCTCGCTTGGTGGAGAGAGTGGAAGGCAGCGTAGTCCCCGTCGACCAA
CTTTCGAAGGCTGAAGCAGAATCGCTTCTCCGCGGCGCTGCCGAGCTGTC
GACTGGTTCCAGCCTCCCGTCAGCGGCGGCCAAGATCATCGAGCGGTGCG
ACCGGATGGCAAACCACTTGGAGTTTGTCGGCCGATGGAGTACTGTGAAG
GGCAGCGACGATGAAGAGGACTGGGCGGAGGCTGTCTCGGCCATCGACGC
CGAGATGAGTGCGATGGCTGGCGAAGCGGAGGCGCAAAAGAACGACGAGG
GTCTCCCAGAGGTCAAGCGTGTCGCTATCCTTCGCGCTGGCTTCCTCGAT
CTCGCTGCCCAAAACGGCTTCAACCCTTTGCTCTACCTCAGCCTTGCGGT
CATGCCCGACGGCCGTGCTTTCGGGGCGAAAGAAGCGGCCGTGCTTCTCT
ACGACGACGGAGCCGACGACGGTGCTAGCCAGCGTAGGACCAGGCAGGCG
GCGAAGGTCGTGGCCAACCTCGAACAGTGGGCTGTGGTCACGATGCATGG
GGACTTGTTTCGGATGCACGACGCCCACACAGACTTCGCGAGGAACAAGC
TCAAGAAGAGCGAGGACGTGCGCGCGCCGGCCGTGAGGCGATGGCGCGGC
TTCATCTCCACGCTAGCCACTGTGCGTTCCACGGACTACTTTGAGCTGGT
GGATCTTTGGCACGCTACAGAGACGGTAGGAGGAGAGAGTTGGCGCGTGT
CACGCCCGTACCACGTTGCTCTGGATTCTATCCCAGACTCCAGTTCTGAG
TGCATACCCTCTCTGAAGGCCGTGGTCCAGTTCGGGATCAACGAATGTGC
ATGGGACATCACTCATGACGTTGCGCTCCGGCTGCTCCGCGTGCAGAAAG
ATGCGGCGGTGGGACACGCAGAGTTGCGACACACGTTGGAATCGCTCATC
CATTGTGCGAATGCCTTAAATCTAAACAGCGGTGCGGATGCTCATCGTCG
TGAGCTCTCGTCGATGGTGGACGCCGCCTGGGAGGAACGATCGCATACAG
CCAACTCTCCGCCGAGGCTTGTTGCGGAGCAGTTATTGGAACGCGGCCAG
CAATTGGCAATCACAAGACGGCCCGACGAGGCGCATGAGGCTATCAGCGA
AGCTTTGCGGATCCAACAAGACGGTGGTGGAGACTTTGAAAGGCTGGAGA
TATCGGCAACGTTGGAGTTTCTAGCCATTGTTCTGGTGGACCTCAAGCGG
TACAACGAAGGTGTGGAGGTCTACCAGCGATGTCTCCGTATCAAAGAAAA
TCTCTACGGACACGAGCACTTACGGCTGACAGTGACGCTGCATAACTTGG
CTGTTTGTGCACTAAAACGGGGGGAACCGGGCGACGTAGAAATGGCCAGT
GAGCTTCTTCGGCGTGCCCTCAACATCAAGGAAGCGAAAACAGGAGAGGA
CCACGTGGGGATGGTCCGAACTTTACATTGGCTCCGCAGATGTGCGGAAC
AAGCGGGCAAGCCCGACGAGGAAAAGCTCTACAAGGAACGCATCAAAAGA
CTCGAAGATGCGACCACCAAAGGCAACGAGTCGGCGCCGGTATAGGCGGA
GGCGATTCCACAGAACCAGACGCCAGCCACTGTCCCGGTGGCCGCGGTGC
CAAAAGGGAAGCCAGCCGAACAGTCCTGGCACGTCGCCCGCGATAGGGTC
GTGAATGCCGTGTACGAACACCTCTCTTCCGGGCAAATGCCACAAGTGGT
GGGGCTAGTCGGTCGGAGTGGCTCAGGAAAGACCACGTGCGCCGCGTCTA
TCGTCGGAGAGCCCAAGGGAGTCAGCTCACGCCGTCAGAGCGAAACCGGG
GACCAAATGCTTCGGCGCCTAAACCGGGTTCGGGAGCACTTCCGTGACGG
GGTGGTGTGGCTACGGGTTGGCAGGGGAGCCGGGTCCGCGGATCGCGCTC
CTGCCCTAATGTCACATCTGGCGAAGACTGTGTTCGAAGAGCTCGCGCAC
AGTTACGGGTTTGCCCCCGGAGGTCATGATCCTCGCGATGGCTCGACCTT
CATCCGTGACTTTGTTCGAGGGACAGGCGGGGCCGCGAGACCAAAACGCT
GTCTAATCGTTGCCGATGATGTCTGGGAAGTCGACATTTTGGAGGAGCTG
CGGCACACCGGCATGTGGGTTCTTTTTACGACTCGTGACCCTCGCTTGGT
GGAGAGAGTGGAAGGCAGCGTAGTCCCCGTCGACCAACTTTCGAAGGCTG
AAGCAGAATCGCTTCTCCGCGGCGCTGCCGAGCTGTCGACTGGTTCCAGC
CTCCCGTCAGCGGCGGCCAAGATCATCGAGCGGTGCGACCGGATGGCAAA
CCACTTGGAGTTTGTCGGCCGATGGAGTACTGTGAAGGGCAGCGACGATG
AAGAGGACTGGGCGGAGGCTGTCTCGGCCATCGACGCCGAGATGAGTGCG
ATGGCTGGCGAAGCGGAGGCGCAAAAGAACGACGAGGGTCTCCCAGAGGT
CAAGCGTGTCGCTATCCTTCGCGCTGGCTTCCTCGATCTCGCTGCCCAAA
ACGGCTTCAACCCTTTGCTCTACCTCAGCCTTGCGGTCATGCCCGACGGC
CGTGCTTTCGGGGCGAAAGAAGCGGCCGTGCTTCTCTACGACGACGGAGC
CGACGACGGTGCTAGCCAGCGTAGGACCAGGCAGGCGGCGAAGGTCGTGG
CCAACCTCGAACAGTGGGCTGTGGTCACGATGCATGGGGACTTGTTTCGG
ATGCACGACGCCCACACAGACTTCGCGAGGAACAAGCTCAAGAAGAGCGA
GGACGTGCGCGCGCCGGCCGTGAGGCGATGGCGCGGCTTCATCTCCACGC
TAGCCACTGTGCGTTCCACGGACTACTTTGAGCTGGTGGATCTTTGGCAC
GCTACAGAGACGGTAGGAGGAGAGAGTTGGCGCGTGTCACGCCCGTACCA
CGTTGCTCTGGATTCTATCCCAGACTCCAGTTCTGAGTGCATACCCTCTC
TGAAGGCCGTGGTCCAGTTCGGGATCAACGAATGTGCATGGGACATCACT
CATGACGTTGCGCTCCGGCTGCTCCGCGTGCAGAAAGATGCGGCGGTGGG
ACACGCAGAGTTGCGACACACGTTGGAATCGCTCATCCATTGTGCGAATG
CCTTAAATCTAAACAGCGGTGCGGATGCTCATCGTCGTGAGCTCTCGTCG
ATGGTGGACGCCGCCTGGGAGGAACGATCGCATACAGCCAACTCTCCGCC
GAGGCTTGTTGCGGAGCAGTTATTGGAACGCGGCCAGCAATTGGCAATCA
CAAGACGGCCCGACGAGGCGCATGAGGCTATCAGCGAAGCTTTGCGGATC
CAACAAGACGGTGGTGGAGACTTTGAAAGGCTGGAGATATCGGCAACGTT
GGAGTTTCTAGCCATTGTTCTGGTGGACCTCAAGCGGTACAACGAAGGTG
TGGAGGTCTACCAGCGATGTCTCCGTATCAAAGAAAATCTCTACGGACAC
GAGCACTTACGGCTGACAGTGACGCTGCATAACTTGGCTGTTTGTGCACT
AAAACGGGGGGAACCGGGCGACGTAGAAATGGCCAGTGAGCTTCTTCGGC
GTGCCCTCAACATCAAGGAAGCGAAAACAGGAGAGGACCACGTGGGGATG
GTCCGAACTTTACATTGGCTCCGCAGATGTGCGGAACAAGCGGGCAAGCC
CGACGAGGAAAAGCTCTACAAGGAACGCATCAAAAGACTCGAAGATGCGA
CCACCAAAGGCAACGAGTCGGCGCCGGTATAG