mRNA_C-linearis_contig10.513.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.513.1 vs. uniprot
Match: D7FZX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX1_ECTSI) HSP 1 Score: 1674 bits (4335), Expect = 0.000e+0 Identity = 1111/2095 (53.03%), Postives = 1253/2095 (59.81%), Query Frame = 1
Query: 889 MATDTDFVGAPGSVLVDLFPPDTKLYRNPFVLGHNLDDTLVVFPSDGVA---SPRDRSHQDGIESSRSSPTTLKNSRLDTRRVRLASAAIVAEDAREHS--GKRRRAEERGDEDAQD-GAAGENCEGGLS--SGREGGQYL---------DRPDSGGSRSGDGDKGGSGSSPKKRRGNGGIRFQDEHSEDGHGGSXXXXXXXXXXXXXXXXXXXXXXXPPE-KLKRGRKAKTMSHMEPDGDG-DLKTSDAVSRPGSTGTAKHGRHGRAGGRNDWATIAKAVKEPAYRGPWVSVLLDTNVSCPEGINEVLAEDDVSWQLKPGDRIRIGCCTGHEWEVNGVTVVPNGKGKCRIALSEMYNHAKAMRPQQQHISHAQDSTTLQHXXXXXXXXXXXXXXXHGRNSPHAVGVAGRGDGDGGGRALRRRLVRSGTHGESFRQESRNGLRTVSSHSNVKAATATTTSEHSTAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKENKAGDPTAGSLQQPKAPQNPSEGSGTASTSTTPNDNNAKSRQGYATPNPGATDEAKKRPPRSAAGRKK-LGNLRRGETGLTAPAMGVSSNKLGAAAXXXXXARLGTGNSHGGAKHHGXXXXXXRGKGPAGGGETPERHAAKNLEIFEQNLAALSLPKGVAGKGAGGGRRRSVLGGYKAHSEAIQASRRGNNEV---AAAPLHDPA---------DEEDTPTANPRKRSRTHNSVRKPRRLSEAPREPERVPGAELAGG-EFGQTAASGGSAKGKGGLARCQRVWKMVPPAKDKRPTWLRQYEDGSIAYGNHYQNGAGRRKKEVHFRVRLSWQKLELIVVDRPNTRRFAEFRPKQRYTFFRQLGLDDLLAIAYRETVAASGVPPGTEKASAELDLKSWHTFVVSLGFIADVSQPARHHDIEQMYRQRTRQYKVELRKLEDLAAKERERLLAEERAHARRLAAMGDAAGGADDQACMKGQHQGRPKSGVGTRPGTGSAT--------PAASRPATRARTASRGRGPNGISAKGNATQRGSGTTAGAAVAGRKAPGNRGKSREADGGGEKTAAAGSQRTQTPGTPARPGRGHQPAVQAGGGAGAXXXHSQSGAGHSTAV-SAPVESVRSHQQVVMKHVLDQDLRMDLKGFKEALTALVLLRQPELEQKGSQDEGLRDLVFNHLLVRPELERVREMAWLQAKTWIRMVVKRRLYLAELRRLEALRIVALQKAMSTTIQIWFRRLSWKWKFADVCEKRRLEMMRKLRERRAMXXXXXXXXEEATVFRKSRDLNGCMVMVSMSKKGQRGLD--MHVRAYVPATQ-DTFRFVITENALHAQLCRTLKTESLSGAEILENLDLVAARLSCRKQRDGRRWVVSRAKRVAAESGSLVHRVASRLGEVLFFFKVFRSATEVAVTAYEPRRCETLRAVLPIRGARGVSVWIQWEVEMATIRRKRELLRRLGEVQKILKLHEMNVEIERPKLLAARRLGEAFKQRQLSISAAAAFNTEEGESDTGMANLPRSETSFGMENLLTAPPGNERGEDPPLGDIPPRLGGGLAIASAVPIT-EAPPADPKLTGMGVLPLARYDGAVPDLELFGDGAPLETDEVASAPDVDITARGREVTLAKWILRRVKVEKVRMVEVALPSGGGGSGWDGSEAEKKKRAPKSVARWEKVLVTFYEVEIRRRNLAGSRLQGLSRMRKARKRARSLIFAQFEKRFDVYSGNFYYHSNKTGADTFVKPRLLRPDQDLEEPPDEWIEQKDRSGRKFYTNPATGQRSFLSVPEAAAVIVKACRHHLQAFFGVPSADAIERGLRFSREAKDAWIQGGGRLASTLNYALVLHTHLQDLDAAGPLYDTALKLSGENPLVQRACGLFLLSSCRFPREHSRSKGLALLSAADYRDRDLNTFALAEGAFYHFGLLSTPTRSRALLNWALVLEHVRRDPAKA---------------------------------------------------------------EFFYRRALAANDLDPLVRENYKSFCMERLPGGSFPGGGPGSRVLRRSRLDGDSSEWGGWKRYSDPEASEGCLATYWFNPLQQETSWQGPPT 6846
MATDTDF+GAPGSVL ++FPPDTKLYRNPF+LGHNLDDTL +F +GV SPR R +G S P+ K SRLD +RVRLA+ AIVAE+A+E S G +R E E ++ GA G+ GG+ SG EG R D GS DG G G K+RRG GGI FQD+ E G S XX KLKRGRKAKT+SH+E D D D++TS++ ++PGS KH HGR+GG DW TIAKA+KEPAY+GPW GDRIRIGCCTGHEWEV GV VVPNGKGKCR+ALSE+YNHAK + +D ++P G A ES E+ G R AT + + P+ + E+K P A S+ +P TT + S G A AT + K + A G KK L +RR T XXXXX XXXX +HAA+NLEIFEQNL L+LPKGVAGKGAG GRRRS+LGGYKAHSEA+Q SRR + + A HDP+ D++ P+ RSRT ++ + RR+S APRE ER+PGAE GG + G G G GGLA+CQRVWKMVP A+DKRPTWLRQYEDGSI YG+HYQN AGRR+KEVHFRVRLSW K+ELIV DRPN RRFA+FRPKQRYTFFR+L LDDLLAIAYRETVA+ GVP GTEK+ AELDLKSWH FVVSLGFIADVSQPARHHDIEQ++RQRTRQYK ELRKLE AAKERER LAEERAHARRLAAMG+AA G DD K Q RPKS G R GT S+ P SR +T ARTASRGR +G S G ATQ G A SQR +PGTP+ RGH A + GG XXX APV+SVR+HQQVVMKHVLDQDLRMDL GFK+AL+ALV+LR PELEQ+ SQ EGLRDLVFNH+L+RPELE VREMAWLQAKTWIRM VKR+ YLAELRRLEALRI AL+KA STTIQ WFRRLSW WKFA VCEKRRLE +R+LRE RA V R+ R ++ + G D M+ + Y + RFVITE ALHAQLCRTLKTESLSGAEILENLD VAARLSCRKQRDGRRWVVSRAKRVAAESGSLV+RVASRL V +F KV+RSAT+VAVTAYEP+RCETLR VLPIRGARG+SVWI+WEVE AT+RR+REL RRLGEVQKILKLHEMNVEIERPKLLAARRLG A ++R+ + AA T + + G T EAPP D +LTGMG LP YDGAVPDLELFGDG PLETDEVASAPDV LVTFYE+E +RRNLA SR+QGLSRMR+AR RARS I +QFEKRFDVYSG FYYHSNKT DTFVKP LLRPDQDLEEP DEWIEQKDRSG+ FYTNPATGQRSFLSVPEAAAVIVKACR+HLQAF+G+P D IERG+RFS+EA++AW+QGGGRLASTLNYALVLHTHL DLD AGPLYD AL+LSGENPLVQRACGLFLLSSCRFPRE SR+KGLALLSAADYR ALLNWALVLEHVRRDPA+A + FYRRA+AANDLDP V NYKSFCMERLPGG +PGGGPGSR+LRRSRLDG+S E G WKRY DP ASE CLAT+WF+PLQQETSWQGPPT
Sbjct: 1 MATDTDFIGAPGSVLAEIFPPDTKLYRNPFILGHNLDDTLALFTGNGVGGAVSPRARDSGEGALS----PSQTK-SRLDKQRVRLAAVAIVAEEAKERSRRGSKRHMTEHARETSEVVGATGDI--GGVPNRSGVEGHDLTRSISPPQDGQRSDRSGSGRDDGHLGDDGKVSKRRRGKGGITFQDQQGEGGQADSQPGSDGAGNAESPQAAGKRAHXXXXXGKLKRGRKAKTISHIEVDDDACDVRTSESATKPGSANVTKHSWHGRSGGGADWKTIAKAIKEPAYKGPW------------------------------GDRIRIGCCTGHEWEVRGVIVVPNGKGKCRVALSEVYNHAKGQEGMGRVADVGEDVGQFH------------PAVASSSSAPRLPGAA-----------------------ESIATEAGEGSR-------ADPATTHVGQQPAGMPIPSAAKETRSEATPA-------------VDGEDKGSSPVAPSVTAAPGEAHP----------TTGEEAERSSPGGRAALE--ATIKTKTGRAKLAGGNKKQLDGVRRAGARSTQGXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXKHAARNLEIFEQNLEGLALPKGVAGKGAGSGRRRSLLGGYKAHSEAVQESRRRHPKTPPPARGKPHDPSTNSTVAEPEDQDHDDDHLPKNRSRTPDN--RSRRMSYAPRESERMPGAERRGGLKEGHGGGGIGGXSGVGGLAKCQRVWKMVPQARDKRPTWLRQYEDGSIPYGSHYQNYAGRRQKEVHFRVRLSWAKVELIVTDRPNARRFADFRPKQRYTFFRKLKLDDLLAIAYRETVASGGVP-GTEKSPAELDLKSWHKFVVSLGFIADVSQPARHHDIEQIFRQRTRQYKAELRKLEAQAAKERERQLAEERAHARRLAAMGEAAAGTDDH---KAQQPNRPKSAAGARTGTPSSASASAVRKAPEVSRSSTGARTASRGRDADGKSI-GGATQ-GRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGTSQRGNSPGTPSGRARGHHQAAEGGGXXXXXXXXXXXXXXXXXXXXDAPVDSVRNHQQVVMKHVLDQDLRMDLAGFKDALSALVILRNPELEQRKSQVEGLRDLVFNHVLIRPELEGVREMAWLQAKTWIRMAVKRKQYLAELRRLEALRIAALRKAASTTIQTWFRRLSWLWKFAAVCEKRRLETLRRLREWRA-------------VKRRKR------------RRREEGFDTAMYTQRYQRLSMISNGRFVITEKALHAQLCRTLKTESLSGAEILENLDKVAARLSCRKQRDGRRWVVSRAKRVAAESGSLVYRVASRLDGVFYFLKVYRSATDVAVTAYEPKRCETLRVVLPIRGARGISVWIEWEVETATLRRRRELSRRLGEVQKILKLHEMNVEIERPKLLAARRLGSAVQEREAPLPAA--DTTSKAKRLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTAEAPPTDAELTGMGALPFVWYDGAVPDLELFGDGTPLETDEVASAPDV-------------------------------------------------------------LVTFYEIETQRRNLAASRVQGLSRMRQARDRARSRILSQFEKRFDVYSGKFYYHSNKTKIDTFVKPSLLRPDQDLEEPADEWIEQKDRSGKTFYTNPATGQRSFLSVPEAAAVIVKACRYHLQAFYGIPGPDVIERGIRFSQEAEEAWVQGGGRLASTLNYALVLHTHLHDLDTAGPLYDAALELSGENPLVQRACGLFLLSSCRFPREQSRAKGLALLSAADYR---------------------------ALLNWALVLEHVRRDPAQAGKYVGPYCGRRYVLFCDFRIWTNVPCSAWGQVGENRQRDRSDSLHKLAPHEHDDTSPPMLLGKQLFYRRAIAANDLDPHVLANYKSFCMERLPGGLYPGGGPGSRILRRSRLDGESLELGAWKRYHDPAASERCLATFWFHPLQQETSWQGPPT 1853
BLAST of mRNA_C-linearis_contig10.513.1 vs. uniprot
Match: A0A6H5KPG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG2_9PHAE) HSP 1 Score: 790 bits (2041), Expect = 8.340e-262 Identity = 410/568 (72.18%), Postives = 453/568 (79.75%), Query Frame = 1
Query: 5155 MNVEIERPKLLAARRLGEAFKQRQLSISAAAAFNTEEGESDTG-MANLPRSETSFGMENLLTAPPGNERGEDPPLGDIPPRLGGGLAIASAVPITEAPPADPKLTGMGVLPLARYDGAVPDLELFGDGAPLETDEVASAPDVDITARGREVTLAKWILRRVKVEKVRMVEVALPSGGGGSGWDGS---EAEKKKRAPKSVARWEKVLVTFYEVEIRRRNLAGSRLQGLSRMRKARKRARSLIFAQFEKRFDVYSGNFYYHSNKTGADTFVKPRLLRPDQDLEEPPDEWIEQKDRSGRKFYTNPATGQRSFLSVPEAAAVIVKACRHHLQAFFGVPSADAIERGLRFSREAKDAWIQGGGRLASTLNYALVLHTHLQDLDAAGPLYDTALKLSGENPLVQRACGLFLLSSCRFPREHSRSKGLALLSAADYRDRDLNTFALAEGAFYHFGLLSTPTRSRALLNWALVLEHVRRDPAKAEFFYRRALAANDLDPLVRENYKSFCMERLPGGSFPGGGPGSRVLRRSRLDGDSSEWGGWKRYSDPEASEGCLATYWFNPLQQETSWQGPPT 6846
MNVEIERPKLLAARRLG A +QR+ + AA + G +A+L RS + TEAPP D +LTGMG LP YDGAVPDLELFGDG PLETDEVASAP++DITARGREVTLA+WILRR+KV++VR+VEV LP GGG +K+K A + VARWE+VLVTFYE+E++RRNLA SR+QGLSRMR+AR RARS I +QFEKRFDVYSG FYYHSNKT DTFVKPRLLRPDQDLEEP DEWIEQKDRSG+ FYTNPATGQRSFLSVPEAAAVIVKACR+HLQAF+G+P D IERG+RFS EA++AW+QGGGRLASTLNYALVLHTHL DLD AGPLYD AL+LSGENPLVQRACGLFLLSSCRFPRE SR+KGLALLSAADYRDRDLNTFALAEGAFYHFGLLS P +RALLNWAL+LEHVRRDPA+AE FYRRA+AANDLDP V NYKSFCMERLPGG +PGGGPGSRVLRRSRLDG+S E GWKRY DP ASE CLAT+WF+PLQQETSWQGPPT
Sbjct: 1 MNVEIERPKLLAARRLGSAVQQREAPLPAADTTSKANRFPGGGSVADLLRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGT--TEAPPTDAELTGMGALPFVWYDGAVPDLELFGDGTPLETDEVASAPEIDITARGREVTLARWILRRIKVDRVRVVEVELPCGGGXXXXXXXXXXSKQKQKVARRPVARWERVLVTFYEIEMQRRNLAASRVQGLSRMRQARDRARSRILSQFEKRFDVYSGKFYYHSNKTKVDTFVKPRLLRPDQDLEEPADEWIEQKDRSGKTFYTNPATGQRSFLSVPEAAAVIVKACRYHLQAFYGIPGPDVIERGIRFSHEAEEAWVQGGGRLASTLNYALVLHTHLHDLDTAGPLYDAALELSGENPLVQRACGLFLLSSCRFPREQSRAKGLALLSAADYRDRDLNTFALAEGAFYHFGLLSMPNHARALLNWALILEHVRRDPAQAEMFYRRAIAANDLDPHVLANYKSFCMERLPGGRYPGGGPGSRVLRRSRLDGESLELEGWKRYCDPAASEKCLATFWFHPLQQETSWQGPPT 566
BLAST of mRNA_C-linearis_contig10.513.1 vs. uniprot
Match: A0A835Z8Q4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q4_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.470e-38 Identity = 239/994 (24.04%), Postives = 349/994 (35.11%), Query Frame = 1
Query: 4348 KTWIRMVVKRRLYLAELRRLEALRIVALQKAMSTTIQIWFRRLSWKWKFADVCEKRRLEMMRKLRERRAMXXXXXXXXEEATVFRKSRDLNGCMVMVSMSKK-----------------------GQRGLDMHVRAYVPATQDTFRFVITENALHAQLCRTLKTESLSGAEILE--NLDLVA--------------------ARLSCRKQRDGRRWVV-------------------------------SRA-----------------------------KRVAAESGSLVHRVASRLGEVLFFFKVFRSATEVAVTAYEPRRCETLRAVLPIRGARGVSVWIQWEVEMATIRRKRELLRRLGEVQKILKLHEMNVEIERPKLLAARRLGEAFKQRQLSISAAAAFNTEEGESDTGMANLPRSETSFGMENLLTAPPGNERGEDPPLGDIPPRLGGGLAIASAVPITEAPPADPKLTGMGVLPLARYDGAVPDLELFGDGAPLETDEVASAPDV-----DITARGREVTLAKWILRRVKVEKVRMVEVALPSGGGGSGWDGSEAEKKKRAPKSVARWEKVLVTFYEVEIRRRNLAGSRLQGLSRMRKARKRARSLIFAQFEKRFDVYSGNFYYH----------------------------SNKTGADTFVKPRLLRPDQD-------------------------LEEPPDEWIEQKDRSGRKFYTNPATGQRSFLSVPEAAAVIVKACRHHLQAF------FGVPSADAIERGLRFSREAKDAWIQGGGRLASTLNYALVLHTHLQDLDAAGPLYDTALKLSGENPLVQRACGLFLLSSCRFPREHSRSKGLALLSAADYRDRDLNTFALAEGAFYHFGLLSTPTRSRALLNWALVLEHVRRDPAKAEFFYRRALAANDLDPLVRENYKSFCMERLPGGSFPGGGPGSRVLRRSRLDGDSSEWGGWKRYSDPEASEGCLATYWFNPLQQE 6822
+T RMV RR L L R A R+ Q+ ST +Q WFR W W +R+LRE A V R ++G +V V+ S R +DM ++ Y+P TQ +F + E L LCR L+ + +SGAE+L+ NL++ ARLS + Q V SRA KR E+G++VHR R+G VL++ V RS E+ + Y+P R ++P RG+ + W++WE + R+ E+ +R+ +K+++LH V +L AA+R+ G S T +A L T+ PP P+L G+ L Y G V DL A L T E A P D+ ++ E L +W+L+R+ VA P G G V+ T ++V+ R N A +R QG+ RM +AR R R+L+ Q+ K +D G F+Y K+ + F+ D D L PP +G+ +Y N ATG S LS AAA+I A L F G S + G +F A++ + RL+ LN A+ LH H L A LY++AL +S +N LVQRA +FLL+S A+G + A+L+WALV E +R ++ YRRALA C +LRR+ ++ EWGGW+R DP LAT+WF+ + Q+
Sbjct: 869 QTLARMVPPRRRALPMLLRARAARLAHRQRVASTRLQRWFRHERWIWYL----------QVRRLRE-------------GARVMRHVGRVHGHIVCVTASLALPAGADPEAADPPAAPAEQPLVARLRSIDMVLQVYLPHTQQSFAVAVHEGELRRHLCRALRVDGISGAELLDPANLNIARRRQYWRGAAGPRQPQTCGGFARLSPQLQNANIHHFVRKKGQCPTIAVLRVDGISGAELLNAANLKCHSRAAPSPEAATGSXXXXXXXXXXXXXVEIFLRKRWPPEAGTVVHRSTQRIGSVLYYIHVHRSPQELVLRLYDPATSANTRILVPFRGSASLQEWLEWERDKDRRARRAEVTKRIVTARKLVQLHSYGVAAPEGQLAAAQRV----------------VRHAVGSSSTEVAQLS---------------------------------------------TDEPP-PPELEGICEGLLTPYGGVVADL------AHLGTSEAALQPPPAALREDLFSQAHEGMLMRWLLQRL---------VAQPHGVTGQ----------------------VVKTLFQVQTERWNAAATRAQGVYRMWRARARCRALLREQWVKGYDTTRGAFFYRHVRSECIYACHQRHCMRACEHTPHGFSDKAKSADERFLPYEGKNGDTDKRWWLCQLRAAGCRYASDHLHSAAVLAPPPHA------NAGKTYYLNTATGATSRLSEERAAALIQGAAATKLAPFRSRALGHGALSLVDVAEGRKFHMHAEENYRLHPQRLSCVLNLAMALHLHQGQLGKARRLYESALAISPDNSLVQRAYAIFLLAS-------------------------------AQGG---------DVPAMAMLSWALVQELIRGAADAGDYAYRRALA---------------CAASA-----------DSILRRAEVEEKREEWGGWQRMRDPTPPHPSLATFWFDAVTQD 1668
BLAST of mRNA_C-linearis_contig10.513.1 vs. uniprot
Match: A0A7S2MBM9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MBM9_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.580e-36 Identity = 107/337 (31.75%), Postives = 169/337 (50.15%), Query Frame = 1
Query: 5854 ARSLIFAQFEKRFDVYSGNFYYHSNKTGADTFVKPRLLRPDQDLEEPPDEWIEQKDRSGRK-----FYTNPATGQRSFLSVPEAAAVIVKACRH-HLQAFFG--VPSADAIERGLRFSREAKDAWIQGGGRLASTLNYALVLHTHLQDLDAAGPLYDTALKLSGENPLVQRACGLFLLSSCRFPREHSRSKGLALLSAADYRDRDLNTFALAEGAFYHFGLLSTPTRSRALLNWALVLEHVRRDPAKAEFFYRRALAANDLDPLVRENYKSFCMERLPGGSFPGGGPGSRVLRRSRLDGDSSEWGGWKRYSDPEASEGCLATYWFNPLQQETSWQGP 6840
A+S Q+EK FD + + Y + T KP+LL D+ LE P DEW +++ ++ N ATGQ S+LS EAA ++ + R H G + AD + + ++F A+ + Q +L++ +NYA++ H D DAA +Y+ A+KLS +PL+ R +FLL+S + P + LL AD DR+ A ++ + +L LLN+AL+ + V ++ AE YR ALA + + LV ENY+ F ER PGG + GP V++RS + + +W W++ DP +WFN + T + P
Sbjct: 33 AKSETMHQYEKIFDRENQIYAYRNMLTDQRQKDKPKLLGEDE-LENPVDEWRKEETYDATTGQTIHYFANYATGQSSWLSEEEAARLVQRRYRSKHESDLIGKKITFADVV-KAMQFINGARMKYEQDPTKLSNIVNYAILSHCLDLDFDAARSIYERAVKLSPNHPLISRVYAIFLLASRQAPHTTTFQTACQLLHDADVADRNQTMIKSAAEIYFRWAVLVDARNPLTLLNYALLHQCVYKNYDHAEKLYRAALALDQTNTLVVENYRLFSDERYPGGVYESCGPPFSVVQRSNVVEERLDWAEWRKMIDPLCPRKGFEVFWFNRFTKMTRFTEP 367
BLAST of mRNA_C-linearis_contig10.513.1 vs. uniprot
Match: A0A7S4MCK5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCK5_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.690e-33 Identity = 114/363 (31.40%), Postives = 179/363 (49.31%), Query Frame = 1
Query: 5578 DITARGREVTLAKWILRRVKVE---KVRMVEVALPSGGGGSGWDGSEAEKKKRAPKSVARWEKVLVTFYEVEIRRRNLAGSRLQGLSRMRKARKRARSLIFAQFEKRFDVYSGNFYYHSNKTGADTFVKPRLLRPDQDLEEPPDEW--IEQKD-RSGRK--FYTNPATGQRSFLSVPEAAAVIVKACRH--HLQAFFGVPSADAIERGLRFSREAKDAWIQGGGRLASTLNYALVLHTHLQDLDAAGPLYDTALKLSGENPLVQRACGLFLLSSCRFPREHSRSKGLALLSAADYRDRDLNTFALAEGAFYHFGLLSTPTRSRALLNWALVLEHVRRDPAKAEFFYRRALAANDLDPLVRENY 6636
DI R+ L W+ RRV+++ K ++ + L EAE +KR E++ T +Q + R R AR++A++ + QFEK +D Y + KTGA KP LL PD DL++P DEW IEQ D ++GR FY+NPATGQ S+ S +AA ++ + R + + R ++F R+ ++ + +L+ +N+AL+ H + A LY A+K S +P++ RA GLF+L +C PR ++ L A D D + F F+H+ +++ P ALLN+AL+ +H+ D +A+ YRRALA + V NY
Sbjct: 161 DIMQPARQAELINWLTRRVQIDRHPKTGLLRLILQC----------EAEDEKR--------ERIAAT---------------IQSIWRKRDARQKAKNAVHRQFEKIYDREKRTHCYVNVKTGARQHSKPTLLGPD-DLDDPKDEWQMIEQYDEKTGRSVIFYSNPATGQTSWFSEEDAARMVQRRFRECQTREVIGSTLDFSRVVRAVQFIRKTEENFRICPSKLSHQVNFALLCHCIQFEFCQARRLYKDAIKKSPCHPVIARAYGLFILLACDEPRGLVFNRARNLFKEAKLGDPDNSMFRATIDHFFHWAVVANPKHPMALLNYALLHQHILDDNVRADRLYRRALAVEPSNKFVLMNY 489
BLAST of mRNA_C-linearis_contig10.513.1 vs. uniprot
Match: A0A7S0BX29_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BX29_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.480e-22 Identity = 57/183 (31.15%), Postives = 97/183 (53.01%), Query Frame = 1
Query: 6292 LYDTALKLSGENPLVQRACGLFLLSSCRFPREHSRSKGLALLSAADYRDRDLNTFALAEGAFYHFGLLSTPTRSRALLNWALVLEHVRRDPAKAEFFYRRALAANDLDPLVRENYKSFCMERLPGGSFPGGGPGSRVLRRSRLDGDSSEWGGWKRYSDPEASEGCLATYWFNPLQQETSWQGP 6840
LY L+ S +P++ RA G+FL ++C P K A RD DL F A +H+ +++ P+ A+LN+AL+ + + + AE YR+AL+ + V +NY+SF +R PGG++ GP V++RS + + EWG W++ D + + +W+N L++E + P
Sbjct: 6 LYKDVLRRSPYHPVIGRAYGIFLHTTCEAPFISKIEKARDFFREAKLRDPDLKLFNTAIECAFHWAVVAYPSNVLAVLNYALLQQCILGNYKFAEKLYRKALSIESTNRFVVQNYESFEEQRYPGGAYASNGPSETVVKRSVISLEQPEWGEWQQRLDEQCTNDAFRYFWYNSLRKEAYFDEP 188 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.513.1 >prot_C-linearis_contig10.513.1 ID=prot_C-linearis_contig10.513.1|Name=mRNA_C-linearis_contig10.513.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2282bp MFTATARASSAPRLISELRDEADQKVQEREALMGRVRCLLFPPESTSSPEback to top mRNA from alignment at C-linearis_contig10:1638407..1656834- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.513.1 ID=mRNA_C-linearis_contig10.513.1|Name=mRNA_C-linearis_contig10.513.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=18428bp|location=Sequence derived from alignment at C-linearis_contig10:1638407..1656834- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1638407..1656834- >mRNA_C-linearis_contig10.513.1 ID=mRNA_C-linearis_contig10.513.1|Name=mRNA_C-linearis_contig10.513.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=13692bp|location=Sequence derived from alignment at C-linearis_contig10:1638407..1656834- (Chordaria linearis ClinC8C monoicous)back to top |