Homology
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match:
D7FZX3_ECTSI (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX3_ECTSI)
HSP 1 Score: 932 bits (2409), Expect = 0.000e+0
Identity = 456/494 (92.31%), Postives = 465/494 (94.13%), Query Frame = 2
Query: 134 AAKEAKEETPEPARVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAYSRS 1615
AA AKEE PEP RVYGGLKDQDRIFTNLYGEQDWRVGDA+KRGDWH+TK+IMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAY+ +G LGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFA FGRKNN GTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDI+DCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQML+KMEKGEADTREIPMLEEISR+IEGHTICALGDAAAWPVQ GLIRRFQPVIEERIAGGPE YQ+EK KYFQ AWSGEPFKNK WVDQHGDGKAYSRS
Sbjct: 36 AAPGAKEEAPEPPRVYGGLKDQDRIFTNLYGEQDWRVGDALKRGDWHQTKEIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQ---------KGFLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFASFGRKNNHGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDINDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLVKMEKGEADTREIPMLEEISRSIEGHTICALGDAAAWPVQ---------GLIRRFQPVIEERIAGGPEQYQSEKGKYFQEAWSGEPFKNKAWVDQHGDGKAYSRS 511
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match:
A0A835ZC73_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC73_9STRA)
HSP 1 Score: 819 bits (2116), Expect = 5.920e-290
Identity = 411/509 (80.75%), Postives = 439/509 (86.25%), Query Frame = 2
Query: 80 RAAVRSVAAVGRARSMSAAAKEAKEETPEPARVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAY 1606
RAA RS AVG +R++S AA EA P RVYGGLKDQDRIFTNLYGEQDWR+ A KRGDW+ TK+IMW GPDWIV EMK SGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY A G LG NACGSGYDFD+YLHRGAGAYICGEETALIESLEGRQGKPR+KPPFPANVGVFGCPTTVTNVET+AVAPTILRRG +WFAGFGRKNN+GTKLFAISGHVN+P VVEEEMSI L++LL++HCGGVRGGWD LQAVIPGGSSVPVLDI+DC DV+MDFDDLK GSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGT WLEQ+L++ME GEAD REIPMLEEI+R IEGHTICALGDAAAWPVQ GLIRRFQ V+E+RI A + +YFQ AWSG+PF N DW HGDGK Y
Sbjct: 16 RAAARS-RAVG-SRTLSTAAPEA----PPLTRVYGGLKDQDRIFTNLYGEQDWRIKAAEKRGDWYMTKEIMWQGPDWIVNEMKASGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYLA---------GKLGANACGSGYDFDIYLHRGAGAYICGEETALIESLEGRQGKPRMKPPFPANVGVFGCPTTVTNVETIAVAPTILRRGGAWFAGFGRKNNAGTKLFAISGHVNSPKVVEEEMSIPLKDLLERHCGGVRGGWDQLQAVIPGGSSVPVLDINDCKDVLMDFDDLKSRGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTNWLEQLLVRMESGEADKREIPMLEEITRQIEGHTICALGDAAAWPVQ---------GLIRRFQHVVEDRI---DNADTFDPAQYFQHAWSGQPFTNADWTKAHGDGKTY 497
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match:
A0A7S1TYU1_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYU1_9STRA)
HSP 1 Score: 812 bits (2097), Expect = 1.970e-287
Identity = 400/499 (80.16%), Postives = 436/499 (87.37%), Query Frame = 2
Query: 116 ARSMSAAAKEAKEET-PEPARVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAYS 1609
A + +AAA+ +E P+ +VYGGLKDQDRIFTN+YGEQDWR+ DAMKRGDWH+TKDI+ MGPDWIVQE+KDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLVVNADESEPGTCKDREIMRKDPHKL+EGCL+AGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY +G++G+NACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCP+TVTNVETVAVAPTILRRG+SWFAGFGRK NSGTKLF ISGHVNNP VVEEEMSI LRELL++HCGGVRGGW NLQAVIPGGSSVPVLD +DC VMMDFDDLK GSGLGTAAVTVMDKSVDM+AAIRRLAHFYKHESCGQCTPCREGTGWLE++L++ME G AD EI MLEEISR IEGHTICALGDAAAWPVQ GLIRRFQ VIE+RI PE + A D +FQ AWSGEPF N +W + HG GK ++
Sbjct: 4 AATAAAAARPLSDEAEPQLTQVYGGLKDQDRIFTNIYGEQDWRIKDAMKRGDWHRTKDILCMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKASDGRPSFLVVNADESEPGTCKDREIMRKDPHKLIEGCLIAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYA---------KGMIGENACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGSSWFAGFGRKGNSGTKLFGISGHVNNPKVVEEEMSIDLRELLERHCGGVRGGWSNLQAVIPGGSSVPVLDENDCQSVMMDFDDLKAKGSGLGTAAVTVMDKSVDMVAAIRRLAHFYKHESCGQCTPCREGTGWLEEVLVRMEAGNADHGEIAMLEEISRQIEGHTICALGDAAAWPVQ---------GLIRRFQHVIEDRI-DNPEGFDA--DAHFQRAWSGEPFANGEWANAHGMGKTFA 481
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match:
A0A7S3MFV3_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFV3_9STRA)
HSP 1 Score: 811 bits (2094), Expect = 1.540e-286
Identity = 398/484 (82.23%), Postives = 426/484 (88.02%), Query Frame = 2
Query: 164 EPA--RVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAYS 1609
EPA RVYGGLKDQDRIFTN+YGEQDWR+ AMKRGDW +T++IM GPDWIV E+K SGLRGRGGAGFPSGLKWSFMPK +DGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAG+AMRARA YIYIRGEYFNEAVV+ EAIHEAY A G LGKNACGSGYD+D+YLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPAN+G+FGCPTTVTNVETVAV+PTI RRGASWFAG GR NN+GTKLF ISGHVNNPIVVEEEMSITLRELL++HCGGVRGGW NLQAVIPGGSSVPVLD +DC +VMMDFDDLK AGS LGTAAVTVMDKSVDMIAAIRRL+HFY HESCGQCTPCREGTGW+E +L KME G+AD REIPMLEEISRAIEGHTICALGDAAAWPVQ GLIRRF+ V+E+RI PE Y AEKDKYFQ AWSGE FKN W DQHGDGK ++
Sbjct: 41 EPALTRVYGGLKDQDRIFTNIYGEQDWRLNAAMKRGDWFRTREIMNQGPDWIVNELKASGLRGRGGAGFPSGLKWSFMPKKSDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGFAMRARAGYIYIRGEYFNEAVVLQEAIHEAYAA---------GFLGKNACGSGYDYDLYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANIGLFGCPTTVTNVETVAVSPTIFRRGASWFAGMGRPNNTGTKLFGISGHVNNPIVVEEEMSITLRELLERHCGGVRGGWSNLQAVIPGGSSVPVLDENDCQNVMMDFDDLKAAGSALGTAAVTVMDKSVDMIAAIRRLSHFYTHESCGQCTPCREGTGWMETILNKMEHGDADLREIPMLEEISRAIEGHTICALGDAAAWPVQ---------GLIRRFKYVMEDRI-NHPEKYAAEKDKYFQRAWSGEQFKNLKWADQHGDGKNFT 505
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match:
F0Y5S2_AURAN (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y5S2_AURAN)
HSP 1 Score: 799 bits (2063), Expect = 1.790e-282
Identity = 389/483 (80.54%), Postives = 419/483 (86.75%), Query Frame = 2
Query: 188 LKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAYSRS*SCHDRV 1636
+KDQDRIFTNLYGE+DWR+GDA KRGDWH TKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLV+NADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARA YIYIRGEYFNEA+VMDEAIHEAY A GL+GKNACGSGYDFD+YLHRGAGAY+CGEETALIESLEG+QGKPRLKPPFPANVGVFGCPTTVTNVET+AVAPTILRRGASWF GFGRKNN+GTKLFAISGHVNNPIVVEEEMSI REL+DKHCGGVRGGW+ LQAVIPGGSSVPVL I++C + +MDFDDLK GSGLGTAAVTVMD +VDMIAAIRRLAHFY+HESCGQCTPCREGTGWLE +L +ME G+AD REI ML+EISR IEGHTICALGDAAAWPVQ GLIRRFQPVIEERIA P+ + E +FQ AWSGE FKN +W + G GK H +
Sbjct: 1 VKDQDRIFTNLYGEEDWRLGDAKKRGDWHMTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKASDGRPSFLVINADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARACYIYIRGEYFNEAMVMDEAIHEAYTA---------GLIGKNACGSGYDFDMYLHRGAGAYVCGEETALIESLEGKQGKPRLKPPFPANVGVFGCPTTVTNVETIAVAPTILRRGASWFTGFGRKNNAGTKLFAISGHVNNPIVVEEEMSIPFRELIDKHCGGVRGGWNKLQAVIPGGSSVPVLPIEECEEALMDFDDLKARGSGLGTAAVTVMDDTVDMIAAIRRLAHFYRHESCGQCTPCREGTGWLETILERMEVGDADVREIGMLDEISRQIEGHTICALGDAAAWPVQ---------GLIRRFQPVIEERIAD-PQGFDFEA--HFQHAWSGEKFKNAEWTKEFGGGKDQEVDPGAHTNI 462
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match:
A0A7S2V010_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V010_9STRA)
HSP 1 Score: 793 bits (2047), Expect = 1.700e-279
Identity = 385/484 (79.55%), Postives = 422/484 (87.19%), Query Frame = 2
Query: 155 ETPEPARVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAY 1606
E P ARVYGGL+DQDRIFTNLYGEQD+R+GDA+KRGDW++TKD++W GPDWIV+E+K SGLRGRGGAGFPSGLKWSFMPK TDGRP FLVVNADESEPGTCKDREIMRKDPHKLVEGCL+AG+AMRARAAYIYIRGEYFNEA ++DEAIHEAYEA G LG +ACGSGYDFDVYLHRGAGAYICGEETALIESLEG+QGKPRLKPPFPAN+GVFGCP+TVTNVETVAV+PTILRRGA WFAGFGR NN+GTKLF ISGHVNNPI VEEEMSI L++LL++HC GVRGGWDNLQAVIPGGSSVPVL+ D ++ +MDFDDLK GSGLGTAAVTVMDKSVDM+AAIRRLAHFYKHESCGQCTPCREGT WLE++L++MEKG+AD REI MLEEISR IEGHTICALGDAAAWPVQ GLI+ FQ VIEERI PE + E +FQ AWSG F NKDWV HG GKAY
Sbjct: 39 EDPALARVYGGLQDQDRIFTNLYGEQDFRLGDAVKRGDWYRTKDLLWQGPDWIVEEIKKSGLRGRGGAGFPSGLKWSFMPKKTDGRPQFLVVNADESEPGTCKDREIMRKDPHKLVEGCLIAGFAMRARAAYIYIRGEYFNEAAILDEAIHEAYEA---------GYLGADACGSGYDFDVYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPANIGVFGCPSTVTNVETVAVSPTILRRGADWFAGFGRPNNAGTKLFCISGHVNNPITVEEEMSIPLKDLLERHCKGVRGGWDNLQAVIPGGSSVPVLNFQDSSEALMDFDDLKARGSGLGTAAVTVMDKSVDMVAAIRRLAHFYKHESCGQCTPCREGTPWLEKILLRMEKGDADKREIAMLEEISRQIEGHTICALGDAAAWPVQ---------GLIKSFQHVIEERI-DNPEGFDPEA--HFQKAWSGSEFVNKDWVKAHGGGKAY 501
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match:
A0A7S3K1X1_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1X1_9STRA)
HSP 1 Score: 791 bits (2043), Expect = 3.640e-279
Identity = 383/475 (80.63%), Postives = 419/475 (88.21%), Query Frame = 2
Query: 173 RVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDG 1597
R YGGLKD DRIFTN+ GEQDWR+ DA+KRGDW+KTK+IMWMGPDWIVQE+KDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLV+NADESEPGTCKDREIMRKDPHKL+EG LLAGYAMRARA YIYIRGEYFNEAVV+DEAIHEAY+A GLLGKNACGSGYD+DVYLHRGAGAYICGEETALIESLEG+QGKPRLKPPFPANVGVFGCP+TVTNVETVAVAPTILRRG SWFA FGR+ NSGTKLFAISGHVNNP VVEEEMSI +REL++KHCGGVRGGWDNLQAVIPGGSSVP+L +D+C++ +MDFDDLK GSGLGTAAVTVMDKSVDMIAAIRRL+HFY HESCGQCTPCREGT WLEQML++MEKG+AD REI MLEEI+R IEGHTICALGDAAAWPVQ GLIRRF+ V+EERI P A+ + FQ AWSG+PF N +W Q+G G
Sbjct: 27 RNYGGLKDSDRIFTNITGEQDWRLKDALKRGDWYKTKEIMWMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKKSDGRPSFLVINADESEPGTCKDREIMRKDPHKLIEGTLLAGYAMRARACYIYIRGEYFNEAVVLDEAIHEAYQA---------GLLGKNACGSGYDYDVYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGSWFASFGRERNSGTKLFAISGHVNNPCVVEEEMSIPMRELIEKHCGGVRGGWDNLQAVIPGGSSVPILPLDECSEALMDFDDLKSRGSGLGTAAVTVMDKSVDMIAAIRRLSHFYSHESCGQCTPCREGTSWLEQMLMRMEKGQADKREIDMLEEITRQIEGHTICALGDAAAWPVQ---------GLIRRFKNVMEERI-NDPTAF--DHQAAFQKAWSGKPFNNHEWTQQYGAG 480
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match:
A0A7S2B9D4_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9D4_9STRA)
HSP 1 Score: 789 bits (2037), Expect = 5.360e-278
Identity = 378/477 (79.25%), Postives = 420/477 (88.05%), Query Frame = 2
Query: 176 VYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAY 1606
YGGLKD DRIFTN+YGE+DWR+ DAM RGDW++TKDIMWMGPDW+VQE+KDSGLRGRGGAGFPSGLKWSFMPK TDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY A G LGKNACGSGYDFDVYLHRGAGAY+CGEETALIESLEG+QGKPRLKPPFPANVGVFGCP+TVTNVET+AVAPTI RRGA+WFA FGRKNN+GTKLF ISGHVNNPIVVEEEMSI+L+ELL+KHCGGVRGGW+NLQAVIPGGSSVPV++ + + +MDFDDLK GS LGTAAVTVMDKSVDM+AAIRRLAHFY+HESCGQCTPCREGTGWLE++L++MEKG+AD REIPMLEEI+R IEGHTICALGDAAAWPVQ GLI++F+P +E R+ + + D +FQ AWSG F NKD+ ++ GDGK Y
Sbjct: 46 TYGGLKDTDRIFTNIYGEKDWRLKDAMLRGDWYRTKDIMWMGPDWMVQEIKDSGLRGRGGAGFPSGLKWSFMPKATDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYAA---------GFLGKNACGSGYDFDVYLHRGAGAYVCGEETALIESLEGKQGKPRLKPPFPANVGVFGCPSTVTNVETIAVAPTIFRRGANWFASFGRKNNTGTKLFGISGHVNNPIVVEEEMSISLQELLEKHCGGVRGGWNNLQAVIPGGSSVPVMNFEQSSVALMDFDDLKAHGSALGTAAVTVMDKSVDMVAAIRRLAHFYRHESCGQCTPCREGTGWLEEILVRMEKGDADVREIPMLEEITRQIEGHTICALGDAAAWPVQ---------GLIKQFKPEMEARLT---DFDSFDPDAHFQRAWSGSEFSNKDYAEKFGDGKTY 501
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match:
B8CBG7_THAPS (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=3 Tax=Ochrophyta TaxID=2696291 RepID=B8CBG7_THAPS)
HSP 1 Score: 779 bits (2012), Expect = 2.940e-274
Identity = 376/477 (78.83%), Postives = 414/477 (86.79%), Query Frame = 2
Query: 176 VYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAY 1606
YGGL DQDRIFTNLYGEQDWR+ DA+KRGD+H TK++MWMGPDWIVQE+KDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLVVNADESEPGTCKDREIMRKDPHKL+EGCL+AGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY A GL+GKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPA VG+FGCP+TVTNVETVAV+PTILRRGASWFAGFG NN GTKLFAISGHV NPIVVEE MSI L+EL++KHCGG+R GWD LQA IPGGSSVPVL+ C + +M+FDDL+ GSGLGTAAVT+ D SVDM+ AIRRL+HFYKHESCGQCTPCREGT WLE +LI+MEKG+AD REIPMLEEISR IEGHTICALGDAAAWPVQ GL+R F+ IE+RI P ++ AEK FQ AWSG+PF N +WVD+HGDG +Y
Sbjct: 40 AYGGLSDQDRIFTNLYGEQDWRLKDALKRGDYHLTKEMMWMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKESDGRPSFLVVNADESEPGTCKDREIMRKDPHKLIEGCLIAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYAA---------GLIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPAGVGLFGCPSTVTNVETVAVSPTILRRGASWFAGFGNPNNRGTKLFAISGHVKNPIVVEESMSIPLQELIEKHCGGMRNGWDTLQACIPGGSSVPVLNKAQCDEALMEFDDLRAKGSGLGTAAVTMFDNSVDMVGAIRRLSHFYKHESCGQCTPCREGTSWLEDILIRMEKGDADKREIPMLEEISRQIEGHTICALGDAAAWPVQ---------GLLRHFKKDIEDRI-DDPSSFDAEKA--FQYAWSGDPFDNSEWVDKHGDGMSY 495
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match:
A0A7S3L3M6_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3M6_9STRA)
HSP 1 Score: 778 bits (2009), Expect = 6.700e-274
Identity = 382/488 (78.28%), Postives = 418/488 (85.66%), Query Frame = 2
Query: 167 PARVYGG-----LKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAYSRS 1615
PA VY LKD+DRIFTNLYGEQDWR+ DAMKRGD+H TK+IMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAY A GL+GKNACGSGYDFD+YLHRGAGAYICGEETALIESLEG+QGKPRLKPPFPA VGVFGCP+TVTNVET+AV+PTILRRGASWFA FGR+NN GTKLFAISGHV +P VVEE MSI LR+L++KHCGG+R GWD++QA IPGGSSVPVL+ C + +MDFDDL+ GSGLGTAAVT+ DKSVDM+AAIRRL+HFYKHESCGQCTPCREGTGWLE +LI+MEKG+AD REIPMLEEISR IEGHTICALGDAAAWPVQ GLIR F+ IE+RI P ++ E FQ AWSG+PF N +W QHG GK Y ++
Sbjct: 27 PAEVYVSSDFSFLKDEDRIFTNLYGEQDWRLKDAMKRGDYHMTKEIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYSA---------GLIGKNACGSGYDFDIYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPAGVGVFGCPSTVTNVETIAVSPTILRRGASWFASFGRENNRGTKLFAISGHVKSPKVVEESMSIPLRDLIEKHCGGMRNGWDSVQACIPGGSSVPVLNKALCDEALMDFDDLRSKGSGLGTAAVTMFDKSVDMVAAIRRLSHFYKHESCGQCTPCREGTGWLEDVLIRMEKGDADKREIPMLEEISRQIEGHTICALGDAAAWPVQ---------GLIRHFKKDIEDRI-DNPASFDHEAA--FQKAWSGDPFDNAEWTKQHGGGKTYVKN 493
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 0.00e+0 / Id = 92.31 Expect = 5.92e-290 / Id = 80.75 Expect = 1.97e-287 / Id = 80.16 Expect = 1.54e-286 / Id = 82.23 Expect = 1.79e-282 / Id = 80.54 Expect = 1.70e-279 / Id = 79.55 Expect = 3.64e-279 / Id = 80.63 Expect = 5.36e-278 / Id = 79.25 Expect = 2.94e-274 / Id = 78.83 Expect = 6.70e-274 / Id = 78.28 Sequence D7FZX3_ECTSI A0A835ZC73_9STRA A0A7S1TYU1_9STRA A0A7S3MFV3_9STRA F0Y5S2_AURAN A0A7S2V010_9STRA A0A7S3K1X1_9STRA A0A7S2B9D4_9STRA B8CBG7_THAPS A0A7S3L3M6_9STRA
Match Name E-value Identity Description
D7FZX3_ECTSI 0.000e+0 92.31 NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more] A0A835ZC73_9STRA 5.920e-290 80.75 NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more] A0A7S1TYU1_9STRA 1.970e-287 80.16 NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more] A0A7S3MFV3_9STRA 1.540e-286 82.23 NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more] F0Y5S2_AURAN 1.790e-282 80.54 NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more] A0A7S2V010_9STRA 1.700e-279 79.55 NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more] A0A7S3K1X1_9STRA 3.640e-279 80.63 NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more] A0A7S2B9D4_9STRA 5.360e-278 79.25 NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more] B8CBG7_THAPS 2.940e-274 78.83 NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more] A0A7S3L3M6_9STRA 6.700e-274 78.28 NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 941.8 Seed ortholog evalue 1.4e-271 Seed eggNOG ortholog 2880.D7FZX3 Preferred name Ndufv1 KEGG rclass RC00061 KEGG ko ko:K03942 KEGG TC 3.D.1.6 KEGG Reaction R11945 KEGG Pathway ko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016 KEGG Module M00143 Hectar predicted targeting category mitochondrion GOs GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0016020,GO:0019866,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0070469,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1902494,GO:1990204 EggNOG free text desc. FMN binding EggNOG OGs COG1894@1,KOG2658@2759 Ec32 ortholog description NB-ARC and TPR repeat-containing protein Ec32 ortholog Ec-22_003750.1 EC 1.6.5.3,1.6.99.3 COG Functional cat. C Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko01000 Exons 11 Model size 2776 Cds size 1605 Stop 1 Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927336.334978-UTR-C-linearis_contig10:1622967..1622980 1622927336.334978-UTR-C-linearis_contig10:1622967..1622980 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1622968..1622980 + 1690879634.1873987-UTR-C-linearis_contig10:1622967..1622980 1690879634.1873987-UTR-C-linearis_contig10:1622967..1622980 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1622968..1622980 + 1622927336.4645932-UTR-C-linearis_contig10:1631527..1632685 1622927336.4645932-UTR-C-linearis_contig10:1631527..1632685 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1631528..1632685 + 1690879634.3090847-UTR-C-linearis_contig10:1631527..1632685 1690879634.3090847-UTR-C-linearis_contig10:1631527..1632685 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1631528..1632685 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927336.3476558-CDS-C-linearis_contig10:1622980..1623078 1622927336.3476558-CDS-C-linearis_contig10:1622980..1623078 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1622981..1623078 + 1690879634.1990137-CDS-C-linearis_contig10:1622980..1623078 1690879634.1990137-CDS-C-linearis_contig10:1622980..1623078 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1622981..1623078 + 1622927336.356468-CDS-C-linearis_contig10:1624791..1624950 1622927336.356468-CDS-C-linearis_contig10:1624791..1624950 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1624792..1624950 + 1690879634.2085845-CDS-C-linearis_contig10:1624791..1624950 1690879634.2085845-CDS-C-linearis_contig10:1624791..1624950 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1624792..1624950 + 1622927336.3654408-CDS-C-linearis_contig10:1625284..1625477 1622927336.3654408-CDS-C-linearis_contig10:1625284..1625477 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1625285..1625477 + 1690879634.2183926-CDS-C-linearis_contig10:1625284..1625477 1690879634.2183926-CDS-C-linearis_contig10:1625284..1625477 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1625285..1625477 + 1622927336.37744-CDS-C-linearis_contig10:1625833..1626016 1622927336.37744-CDS-C-linearis_contig10:1625833..1626016 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1625834..1626016 + 1690879634.227847-CDS-C-linearis_contig10:1625833..1626016 1690879634.227847-CDS-C-linearis_contig10:1625833..1626016 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1625834..1626016 + 1622927336.388903-CDS-C-linearis_contig10:1626359..1626476 1622927336.388903-CDS-C-linearis_contig10:1626359..1626476 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1626360..1626476 + 1690879634.2368004-CDS-C-linearis_contig10:1626359..1626476 1690879634.2368004-CDS-C-linearis_contig10:1626359..1626476 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1626360..1626476 + 1622927336.4028413-CDS-C-linearis_contig10:1627137..1627290 1622927336.4028413-CDS-C-linearis_contig10:1627137..1627290 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1627138..1627290 + 1690879634.2444704-CDS-C-linearis_contig10:1627137..1627290 1690879634.2444704-CDS-C-linearis_contig10:1627137..1627290 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1627138..1627290 + 1622927336.4148216-CDS-C-linearis_contig10:1627790..1627931 1622927336.4148216-CDS-C-linearis_contig10:1627790..1627931 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1627791..1627931 + 1690879634.2547793-CDS-C-linearis_contig10:1627790..1627931 1690879634.2547793-CDS-C-linearis_contig10:1627790..1627931 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1627791..1627931 + 1622927336.4242675-CDS-C-linearis_contig10:1628276..1628488 1622927336.4242675-CDS-C-linearis_contig10:1628276..1628488 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1628277..1628488 + 1690879634.2708964-CDS-C-linearis_contig10:1628276..1628488 1690879634.2708964-CDS-C-linearis_contig10:1628276..1628488 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1628277..1628488 + 1622927336.4331994-CDS-C-linearis_contig10:1629015..1629193 1622927336.4331994-CDS-C-linearis_contig10:1629015..1629193 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1629016..1629193 + 1690879634.2828126-CDS-C-linearis_contig10:1629015..1629193 1690879634.2828126-CDS-C-linearis_contig10:1629015..1629193 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1629016..1629193 + 1622927336.4433017-CDS-C-linearis_contig10:1630119..1630242 1622927336.4433017-CDS-C-linearis_contig10:1630119..1630242 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1630120..1630242 + 1690879634.2927885-CDS-C-linearis_contig10:1630119..1630242 1690879634.2927885-CDS-C-linearis_contig10:1630119..1630242 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1630120..1630242 + 1622927336.4545858-CDS-C-linearis_contig10:1631479..1631527 1622927336.4545858-CDS-C-linearis_contig10:1631479..1631527 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1631480..1631527 + 1690879634.300938-CDS-C-linearis_contig10:1631479..1631527 1690879634.300938-CDS-C-linearis_contig10:1631479..1631527 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1631480..1631527 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.511.1
>prot_C-linearis_contig10.511.1 ID=prot_C-linearis_contig10.511.1|Name=mRNA_C-linearis_contig10.511.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=535bp
MMYKAAARAAAAATASASAPSARAAVRSVAAVGRARSMSAAAKEAKEETP back to top mRNA from alignment at C-linearis_contig10:1622968..1632685+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.511.1 ID=mRNA_C-linearis_contig10.511.1|Name=mRNA_C-linearis_contig10.511.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9718bp|location=Sequence derived from alignment at C-linearis_contig10:1622968..1632685+ (Chordaria linearis ClinC8C monoicous)AAAAAAGAGAGCA ATGATGTACAAGGCGGCGGCGCGCGCTGCTGCCGCAG
CGACGGCTTCGGCCTCGGCGCCCTCGGCCAGGGCGGCCGTAAGAAGCGTG
GCAGCAGTAGG GTGAGTCCGCTTTCACGTATGCGACTGTTCTACTCTGTG
TTTTTCTGTCCATCAGACTCCAAACCAACCCTCTTGCGTGGCAGTAAAAG
TTTCGCTTATTTTGTAGAGCGCGGCGTGCGCTCTGATTCATCGCCGCTTA
CATAGTACCTGGTACAGCAGTCGCAGCAGTGGTAGGTGTTTTGCAAGCGC
CCTCTGAGTAAGAGGCCATATCCGCCGCGCCCCGGCTTTTACGCGTGGAG
GGCGTGTCTGAGGGTTTGATGGGGGGGCCTTGGGATAAGTTTGGCCTCCA
TTGCCGCATATGATTAGCCCCAGCAGCAGGAATGCTGCCTGAAAGAGCAG
CAGCTGTTGGCATGACAACAGACGTCGTCGGTGTTGACTCACGTGCACCC
AAGTTTTGTTGCGTCGGCTGTCTGTTCCTTACGTCAACCGGAAGTCATTT
GCTGCCGTTTGACATGAACTGCAGGGTTGGAAGGAAACGACCCCACGTGA
CACGTTCAAGCCTTTTTTGCACACCCTCGCGCACAAGCTCGGAGATTGAC
ACACGCGAAGCACAGCTCTCTTCGATCTGTGCGTATGTGGCGGCTCTCTA
AATAACTCTCTTGTGGAGCAGTATTGGCAGGACGAAGTGCGTCGTGGTTT
GCACACGCCGTGGCAAAAAATGCAACCCAAGAAGCGGCATATTTAATACC
ACTCCGTATTTAGCATCCTCATTCCGCATCATTGTTTTGTGTAGATACTA
ATACTAGTACGACGTATGTAACTTATGTACTACAAGCGGTGCTGCGCGCC
AGTGACATCTCAAAGCTGTCCACAACCTCTGCAGCATGTGGCGGTTGCCT
CTTGTCTTTTCATTTTATTTGGGAACGTCGCTAGGAGGATGGGCGTGGGC
ATGGTTTACGCACGTATGTACACAGCGTACAGCAGTGCGTACCGGCCCAA
TCATATGTAAGTTATCTGAAATCGGGCTCAGGCTGACTTTTTTCTGCGAG
GCCAGGGATGATTGCCTTCGTTTTTAAAGGATTTAGTGTGGTGCTCGCCA
CGGAGCCCCCGTGCTTTCTTAATTTTGTGAAAATATCGGGCTGATTTTCT
TGTAAACCCACTCTGAGGATTGGGGGACTGCCTTCGCGAAGAAATTACTG
TACATCTGTGATTTAGACTACAGGGGGCTCCGTAACCCTAACCCCAACCA
CCGACCCCCCACCAGTTAGCCAATTCCAAACTTCATCCCACATGTTTTCT
TATTACAAGCCTGCGTAGACTACCGGGATTGGGCCGGCCGGTACTCTGTG
TACAGCAGCGGTGTGGTTGTGTTTCACTCATTTCGGCCGCGAGGGGCTCT
CTCTGCCTCGGAAGGGTGACAATGCCGTCTGTGTCTTTTGTCCCCACATG
ATTTGGATTTAACGCCGGCGGATGCAGCGTTGCTGCATCTTGGTGTGAGA
TCGCTCTCCGACACGCACACTCCGGTGCGTAGCTGGCGCCAAAAGTCGTG
CGTGTTGCGACGACGACAACCACCTACCCAGAGGACGAACAAAAAAACCA
GCAGCGTTGATGATACGCCCCGCCCCGGGAGAGCGAAAACCCTCATAACT
GTATGTACACCGCCGTAACCAGAAAGCAACACCACCGCCAGCACGACAAC
GACAACAGCATCAACGACAACACCACCACCCCTGACGTCCCCCTCCCCTC
CTGCACTCACCATCGCGGAAACAGCAGGGCCCGTTCTATGAGCGCCGCGG
CGAAGGAGGCGAAGGAAGAGACCCCGGAGCCGGCGCGCGTGTACGGCGGG
CTGAAGGACCAGGACAGGATCTTCACCAACCTCTACGGGGAGCAGGACTG
GCGCGTAGGAGACGCCATGAAGCGTGGAGACTG GTGAGGGCTGCTTGCGT
TCGTGTGTGTGTGTGTGTGTGTCGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGCCCCTGGTGGCTGTTATTTACGCGAGAAAATAGTGCCGTTTCG
TCCGCAAGACACAAAGACGCTCGGGTGTACGCCTCGTGTCCAGACAAACC
AAGCACCGAGCCGTGTACGCGTACAAACTCCTCCGTATTTACTCACATGG
ATCTCTCTTTATTGCGGTATACATATACATACTTCGCGGTATACATACAT
ATACTTCAAAGTAGTATTCGAGTACGCCAGTTCACACGCTCGTTGTCTCA
CAAAAACCAAAACTCAGGCACAAGACGAAGGACATCATGTGGATGGGCCC
CGACTGGATCGTGCAGGAGATGAAGGACTCCGGCCTCCGGGGCAGGGGCG
GCGCCGGCTTCCCGTCGGGGCTGAAGTGGTCCTTCATGCCCAAGAACACC
GATGGGCGCCCGTCGTTTCTTGTCGTCAACGCCGACGAGTCCGAGCCGGG
GACGTGCAAG GTTGGTTCGTGCGTCTTGGTTGTGGTTGTGGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTGGTAGT
GGTGTCGAAGTACTCCACTAAGGCCGCCAAGCTGGTGGGACTAGCGAAGC
AAACACCATTAACTAACGTGTACTCTCTTTACGCCGGACCTTGGTGATCG
CGCGCGCAAGAAACGAACCGCTGATGGAGCGCTGAAAATGTCCGCAGCAA
AACAGGTACTGGCATGCGATGTTGTACAGCGAGTTTGACAGCAAAACTGA
TCTGGTTCATCACGCGATGGTAATGGTTTCAACCTCTTTGTGCACTGCCC
GTGGCTGGCTCGTCAGGACCGCGAGATCATGCGCAAGGACCCCCACAAGC
TGGTGGAGGGCTGCCTGCTCGCCGGGTACGCCATGCGCGCGCGTGCCGCC
TACATCTACATCCGCGGGGAGTACTTCAACGAGGCCGTGGTGATGGACGA
AGCCATCCACGAAGCCTACGAGGCAAGCCCCTTCCGCTTGCTTGCAAAA G
TCAAAAGTGTACCGCAGAAAAACATTTACTTTGTTCAATCCCCGCAGTCT
TGTTTTGCGTGCTACTGCTGTAGTGCCATGATCACGGGCCGGCCCACACA
GTTCAGGAAAGCCAGCTGTCCGCTTTGAGCTGCATATTTTGATAATTTAC
CTTCGCTCTTGATAATACGAAGCATACATTTAAGTGCGCTGTGGGTAAAA
ATAAGTCAACAGCCTGTCAAAACCCGAACCCTAAACCTTAGTGGCTTCTG
AAATACACGCCTCTTCTTTAGCTCGTCGTCCTTGTGAATTTTTGGTGTTT
TTTTGTCATGTTTTTCGTGTTTGTTGTGTGTTGTGTGTTCAGAGAGGGTT
GCTGGGCAAGAACGCTTGCGGTTCGGGCTACGACTTCGACGTCTACCTTC
ACCGAGGGGCCGGGGCCTACATCTGCGGCGAGGAGACGGCGCTCATCGAG
AGTCTCGAG GTGGGTCTAAAGGGTCAGGATTGGGGGCAGGGGATTAAGGA
TTTCGAGTTTTCGAGGGTCTCGGAGTTGCAATCTGTGGGGTCATGGGTAC
GGGTTCGGGTTGCGGCCTATCTGCCGTACCCCCAACCACCGCTCACCAGG
GCGCCGGTTGGCATTGTCATCACTCCTCGCGTGTGCGTGTCCGTTTTCTG
GCGCCATCGCTGTTGTCGTTGCTGTTAGAAGTACTGCTGTAACCGTCGAC
ATTCTATATTTCCGTTTCTGTTCCAGCCGCCGCCGCCGTTGCTGAACGGA
ACGGCCCTGCCGCCGGCCTTTCTTCCCTTCCTTGCGTTTGCTGTTTTTGT
TCATCAATGCAGCATCAAAGAAAGAGCCTCCCCTCGAAGAGATACATCTC
GAAGCGGTGGATCAACAGTTCAATACAGCAGTGATGTAATATGGGATAGA
TAGGTGGAGAACGGCAAAAATGGCGGCGCCATGACGAAACGGCAGCCCTA
CTACCGAGAGATTGTTCACGATGAACCACAGCTTTTCGGTGGGCTTATCC
CCCGCTGTATTTGCTGTTTGTTGGCCCGGCAGAGAGTTGCAGGGAGGGGG
GGTTGGCGTTTTTTTCAAGCTTTTGTTGTCCGTTTCCGCCGGCGCCGCCG
TTGTTTTTGCTGTTCCGCAGGGCCGTCAGGGCAAGCCGCGCCTGAAGCCG
CCGTTCCCGGCCAACGTGGGCGTCTTCGGCTGCCCCACCACTGTCACCAA
CGTCGAGACCGTCGCCGTCGCGCCCACGATCCTCCGCCGCGGGGCGAGCT
GGTTCGCGGGCTTCGGACGCAAG GTGTGCCCGATCTCCGTAGATGTTTCC
TTGGCGATCACGGACGGTTACGGACGCGACTTTTTTTCTTTTTTCTTTTT
TGCTTTGCTGTCTGTAGCGCGCTGATCGCGACCCCCTTCTTTTTGCGCGT
TGCTCGAACCCCTTGAGTTAATTCCGAGCCTTTCGTGGCTCGTCCGTGCT
TCATCGTTGCCCGGCTGTTTGTTTCCCGTGTCGGGGTGCCTTTCTTTAAG
GTCAAGAGTTTAGTCCTACTCGGGAGCTTTTTGAGCACTATTTATCGGCT
GTGCACCGTGTTTTGGGTGCCTTGCAGAGGCCATGCTTGGCGGGTAACTT
ATTTGAGGCAATGCGTATGTGCTAGACGAGTTCGGCGTTGTTCAGAGCTC
ACGCTCGTCCCGATTCTTTTGGCGGGTAGTTGATGGTGAGGATGCTGAAA
CCCTGACCCTTGCTCTGCCTGGCGTCACTTTCGCGCCCGATGCTTCTCTC
CCGTCTCGTGTCTTGCACGGCAGAACAACAGCGGCACGAAGCTGTTCGCC
ATCTCGGGGCACGTGAACAACCCCATCGTGGTGGAGGAGGAGATGTCCAT
CACTCTCAGAGAGTTGCTAGACAAGCACTGCGGCGGCGTCAGGGGAGGGT
GGGACAACCTCCAG GTATTGGCGGCGTTTGCTCTTTGCACATTATTTTGG
CTTGATGGTCTTCTCATCAAGTAACCCAAAAAACACAGGACAATGCCCCC
CCCCCCTCGTCTTCCTGTCTTGGGCCCGTCCCCGTCGTCAATACTGGTGG
TTGATATGTTTGTTTGCCCGTGACCGCTGGAATCGATCGCATCGCGTGAT
TGGATGAGAGTGCGGAGTACTCGCAGGTAGATTCAGGAGCAGAAATATAG
AAACATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGA
CAACCAACGACAGCCGACCGCCGTGCCCATCATCAATGAACGCACCGCAA
AACCGGCAGGCGGTCATCCCCGGAGGGTCCTCGGTTCCCGTACTGGACAT
CGACGACTGCGCAGACGTGATGATGGACTTCGACGACCTCAAAAAGGCCG
GCTCGGGGCTGGGCACGGCCGCCGTGACCGTCATGGACAAGAGCGTCGAC
ATGATCGCCGCCATCCGGCGCCTGGCACACTTCTACAAGCACGAGTCCTG
CGGGCAGTGCACCCCCTGCAG GTGAGTTGGCCTCTGGGGGTGTGAAGGGG
TGTTGGATTTTTGGGGGATGCGCATCGTAATGCGCGACTTCTAATTTTTT
GAAGCGCGATTTCTTCAAAGGATAAACTGGCTCGTCGCGGCCCGCCCCCT
CAGGCGACGCTGCCTATCCTAAAAGAGTGGAGTTTTTTCGCGCTTGTTTA
GATTGTACCGATTCCGTTGGCGCTTCTGTTGGTTGTCCTCCCATTCTTGC
GAGCGGTCCAAGTGGCGAGACATGTCCCCACGCGCGTTTGCGTTGCGGCT
GCGAACAAAAAACAATTGACCCGGCAGAGAGTCGCAGGGGAGTTTTTTTT
TTACTCTTCCCAAGTCCTGGGCGTTTTTTCTGCTTCACCTACATCCCATA
TTACGTCACTGCTGTATTAAGCTGTTAATCCGCCGCTTCGAGATTTGTCT
CTCTGAGGGGGGGGTTCTTTCCTCAGGTGCCGTTTTGTTTAATACTTTTT
TTACTCCAGTAAAAAACAAAATGCCGCTGTTTTTTTCGCTTCCGGCAGGG
AGGGCACCGGCTGGTTGGAGCAGATGCTCATCAAGATGGAGAAGGGCGAG
GCTGACACGCGCGAGATACCCATGCTCGAGGAGATCTCCCGGGCCATCGA
GGGGCACACCATCTGCGCGCTCGGCGACGCCGCCGCCTGGCCCGTGCAGG
CGTGTAAATTTCGACCGAGACGCGGC GTATTCTTGTGTCTTGTATCTTGT
GTTTCGCGGCGTGGCGAACTCTTGTATCTTGTATCTTGTGTTTCGCGGCG
TGGCGAATGGTCTGGAGTTTCCTCCGATTTTGTTGCTGTGACTGTGGCCC
GATCGGGAGGCCCGTGCACCGCCGGGTTCGGTGAGAAGGGGTTTTTCTCT
CGTGTGAATCTGAGATGAAGTCTGCTACAGGCAGTACCGGCCCAATCATA
AGAAAGTCAAGCCTGAGATTTTTCACAACATTAAGAAAGTACGGGGGCTC
CGTGGCGATTACCACACTAAATCCTGTATATATGATGGCGATGATCTCTG
GCCTCGCAGAAGAAAGTCAGCCTGAGCCCGATTTCAGTTTTTTTATGATT
GGGCCGGTACTGCTGTAGCACTTGGGGTGATTTTCCTCAAGTGGAGAGTT
GGAGTTCTGATGTGCGATGCGATTACGGTTCCCGTGCAGGTAGATAGCTT
GCACCGCAGAGCAGGCTTGAGTTGCCCGCCCTGCCGTGTTTTCGACTGCA
TCATGACGTACTACTGTGGGTGTTGTTTTGATAACGAGGCGTTCACTTCT
CGAAGCCCCGAACAAACTGCGGCGGTGGCGCCAATTTCAAGTTTTGAAGA
AGTATCCACATACTCCTACTCCTATCATAGTGTTTTTCTGCAGGAGGTTT
TCTGTAGGAGATATTTCGTTCCACTGCTGTATCGGTTGAGAGCTTTCATC
AACACTCGTGCATGAACACAGTTGCCCTGGCGACGCACCACGGCGCCCCC
GCATTTGTTTTGTCTCCTATTCAAAGGCGTTTTTTGTGTTGTTTTTTAAT
CCCACCCCGCCATCATCGTCACACGGCTTTCTTCGTCCGTCTGCATTAAC
GTGTGCTAATATGTTCCTCGCCGCCGTTGGTCTTGTGTGTTTCGGGTCGC
AGGGCCTGATCAGGCGTTTTCAGCCGGTGATCGAGGAGCGCATCGCCGGC
GGGCCGGAGGCGTACCAGGCTGAGAAAGACAAGTACTTCCAGGGGGCTTG
GAGCGGGGAGCCCTTCAAGAACAAG GTACGGGTTATGCCAGGCGATATGT
ATATGTAGGGTTACGGTAGAATGCATGCCCTCTTTCATGCTACTTACTGT
CAGCCCCGAACCAAAAAACAAATAATCAAAAAATAAAATAAGATAAAAAC
ACCCATACAGCAAGTATATACCATCGGAGTATTTTTTATTGTCTGCCCCA
AACCACAAAACTATTTATTCAAGGATAAAATAAAACACCCATGTATATAT
ACGAAGTAGCTGCTCAGGACACTTAACATATACGCAAAAGTCTAGTCAGA
TGCAATGGAATCAAGGTAATACTCCCAGTATACAGTTGTCGCTTCGCCGT
CCGTTCGCCCATTGGTGAAGGTTATTGCGGCGAAATAATTGCATAGAGGC
AAGTTCGCTTGGCGCTTGGGTTACAGCCCTGAAGCATCGGCAGATTTCAC
GAACATGTAGTGTTCCGCAGCCGTTCAAGGGTAGACGTCGTGGTGCGTCG
TCCGGCGGACAGGGCAGTTTTAGTTTTGCCTGCCAGGGCGAAACCCCGGA
GTACCCCGGAGTGTCGTGTGCGGCCGACCTGACAAGTCGTTCCACATGCT
GCTGCTGTGAGACGCCCCCTTAAGAAAAGGGCGGGTGGCCGTCACCCTGT
GGTAGTCTTGGGGGTATGCACACGGGCCAGCCGTCCCAAGGGTGATTACG
CGGCCGCTCCCTACGATGATTTGTAAGTTTTTGTTCCTCCGGCTCGTGTC
GGGACGCTTTTTTCTGATTCTTGTTTTGTTTTCGTCATCAGCCCTGTCCC
TAAAATACCGTAAGTATTCGAGCGATGGCACACCTGTGCGATCGTTTTTC
AAAGCGTGATTTCTCCACAACCAGGAAGGTGCGAACACCAAACGATCCGT
CATACGAAAGCTCTCGACGAGATCTACGTAGATCTTTCCAAACCACAAAA
CCACCCTTTTCGGCAGTGATACCCTCCTGCTTGAGGAGAAATCACGCTCT
GAAAAAAAACGATCGCACAGACAGGCGTGCCATCGCTCCAACACTTTCTC
GCCAAGCGTGTACCATCCCGAAACTCCTGCGAGTAGTCTGCCCGCGTTGT
GGATTTCTTTCTCAGCGTTTGGCGGATTCCTGTTAAGAGGCTTGCGTCGA
TCTATGTATGCCCTTTTGAATGAGCACTCTTTGTCCACCCCTTCCCCCTC
GATTTGACGTTCCCACTGCCCCTCCCACCAAACCTGGCTCTTTTTGCTAT
CTCTGCCGACAGGACTGGGTTGACCAGCACGGCGATGGCAAGGCCTACAG
CCGATCATAA TCATGCCACGACCGGGTCGGCTTTTGTCTCGGGCGCGATT
TGCAAGCAAGTATTATGGACGGATCACTGCTGTTGCTTGGAGCGAGGGGG
CGGGGGCAAAGGATGGCGCGGCAGACGCGGTGTGTACGGCAGCCTTTTGG
GTACTGCTCTCGTGCACTGGTCTCGTGCACTGGTATTGTTTTTTTCGGTG
GGGGCGAAAATCGTGCAAAAGGATGGCGTTGGCAAAAGGAGCTGCTGCGC
GCGTGCGATTGGATGCTGAGTTTTTCTGGGTGGCCACACCAGCGTAGTTC
GGACGCAATAATAGAGTACACGTGTGGGCACGGAACTCGTCTGGCCCACT
TGGTCCGCTTGGTACATACTGTAGCGCGCGGCACTTTTTTTTTTTTTTTT
CGTGTGCGATGCCCTTTGGGGAGGGTGTGTTCATGTGGCTTAGCCGCACC
TCACCAGCCGCGTTGCTCTGCTTCGAAAATGATTGGGAGATGTCGATGGC
ACGTACGATAGGTAGGGGTATCGCATGGCCGTGGACATGCTCCGGCAACA
GGGGCGACGCGGTTTCGCACTTGGATGTTTTTTGGTGCAATTGATGTGGA
AAATATCCTGCTTCTTTTTGTGGGATGGAATGCAGCTCATTTTGTTCTGA
GATGCAGCTTCAATTTTTCTCTGAGTTCCAGTCGCACGCACGCCCATCAT
TTCACCCGCGAGATGGAATTAACCGTGCGAGCCACGAGCCCACAATGATC
AACTCAACCGCGAACACAAAATCGAACCCGTAGTTTGGCGAGCCCGTTTT
GCTACGTTAGATGTAGGCGCCCCCTTAACATGCTTCCTGGCCGATTTCGG
CACAATTGCGTAGTGGTCGCAACTGGGGCGCCCTTTGGTACGTCAGATGG
AGGACTTCATCTTGCCCCCTGTGGCCTATTTGGCGTCATGACCGCCCGAC
CTCTCCCAGACAGCTCCTCCGCCTCCTTCAGGGGCCCTGCCTCTCTGGCG
CACAAGGCTAGGTGTTTCAAAATATTGCCAACCCCCACATTCTTTGGGCC
CAGCTTGGCCTCCACGATCCCCAGACAGCGCCTCCTCCAACCCCTCCGCC
TCCTCCAACCGCCCCGCCTCTCGCGCACCCTCCCAGCTCGAACAAAGTTC
GCGCTGCTTCAACGTTTC back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1622968..1632685+
>mRNA_C-linearis_contig10.511.1 ID=mRNA_C-linearis_contig10.511.1|Name=mRNA_C-linearis_contig10.511.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3210bp|location=Sequence derived from alignment at C-linearis_contig10:1622968..1632685+ (Chordaria linearis ClinC8C monoicous) back to top