mRNA_C-linearis_contig10.510.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.510.1 vs. uniprot
Match: A0A6H5KP75_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP75_9PHAE) HSP 1 Score: 1299 bits (3362), Expect = 0.000e+0 Identity = 769/1295 (59.38%), Postives = 873/1295 (67.41%), Query Frame = 1 Query: 373 HGGRSTALAAAVGLAALAGGPVAXXXXXXXXXXCVQLDGGSVKCWGENFHGQLGQNDALVRGKDNTTMGDNLPQVPLGTFSSVFVDSGGEFNCALDGVGAVKCWGRNEYGQLGLGDNGTRGGPLTDNDMGVNLTEVSLGTGVVVEKIALGGMHACAVIGEGELKCWGRNDRGQLGLNDTVFRGDNANEMGDNLPTVDLGTGVVVTSVAAGEAHTCAVIGDGDVKCWGNNDGGQLGYEDSLPRGTGAGQGLMGNALPVVDLGRDQKAITVAAGFFHTCAMLYTGVVKCWGFGSSGQLGQGNNVSIGNAAGTMGDDLPAVDLGTGRTAVALSLGATHSCAALDNFDLKCWGGNERGSLGLGDTMNRGALDGEMGDSLPAVELSFGAGGGEVSNVFAGRYHTCVSGTKGGLACFGINNGGQLGAETTDDALGDGPNEVNGISSITLGTGVVIADQPAPGADIELXXXXXXXXXXXXXXXXXXXXXXXXSPVPGNGTPAPTGRSGGNPGDNPGDTGVEESGGAPDSGSSDDGRTATVAAIATAAVLIPLIALCALFYCWRRRKQKEGEFKRGPTAAVSGGAGAAGGGSRGYGREDSFTSSENNAEANGEGGAETLSSKPLVKAHALQSTAPMTEGLENQGPAET------LENSSEGLPRPAXXXXXXXXXXXXXXXXXXXXXXXXXXXYSDXXESSRDESSTPSENPSELRRSGSGSSISTLGSTSTASSTWPSDHGFVTPARTDIARGVGG-QYGAGGAGRXXXXXXSGSVTGSGGLDGFRTPANRAATS-----TIPETXXXXXXXXXXXXXXXXPEMRLAQFARNGGAGAGGVDTNLYGLPEMEIGRSKSNVFDSNPVSTSWSVGSKAGGAPLTAASIAXXXXXXXXXXXXXXXXDSSSPHNSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKSSRTSTASPAGRVGGAGWADKEGGVGGAGAGMGAEAAAQAFTEEAELEALQIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSRGVVGEEVTRLYASFAQELRAMKGIRHDCVVAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKREGLTPTIRHRIIKDVARGMAYLSEQGVQHRNLHSHNVLITKDWGAKVADYGLARTSEVMLGAHDRAKAKSGGSKRRPRPSPTPLRPGTLRWMSPELLRPAAADGVDPFTEASDVYSVGVIAWEVLCGGSTLPYDGLPDDKVTSMILEGSTPPVSMETPLVYNKLMLLCWRKNPASRPTFSHIASVLLKDDPPLQKASPR 4221
HG +A V LAA P A C L GG++KCWGENF GQ+GQND LVRGK+ + MGD+LP V LG F + V SG EFNCA G VKCWGRN GQLGLGDN TRGG +MG +L V LGTGV VE I L G HACAV G +KCWG N+ GQLGL D + RG+ +MGD+LP VDLGTGV+ +SVA G HTCAV+ DG VKCWGNNDGGQLGYED+ RGT AG+ MG++LP VDLGRDQKA++VAAGFFHTCA+LYTG +KCWGFGS+GQLGQG N SIG +AGTMGD+LP +DLGTG TA+A+SLG THSCA LD++ +KCWGGN G+LGLGD +NRGA GEMGD+LPAV+L FG G G VSNVFAGR+HTCVSGT+GGL CFG+N+GGQLGA T + +GD P EV +SS++LGT V A APG + L SPV P GR G P D +EE G S ATAA+LIP L LF C+RRRK+KEGE KR P+AAV GAG+ G DSFTSSENN EANGEG +TL++KPLVK HALQSTAPMT G + G A T + +S+EGLPRP D +SSR + ENP LRR+GS SSISTLGSTSTASSTWP+D GFVTPAR +I RG GG +YG G X G G++TP N +A + TIPET P MR+AQF R GG GG DT+LYGLPEMEIGRS SN+++SNP +SW VGSK GGAP TAASIA XXX + SP N+ + +SSRT+ ASP G W D+EGG GMGAEAAAQAFTEEAELEALQIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFS GVVGEEVTRLY +FAQELRAMKGIRH+CV AVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKREGLTP IRH+IIKDVA GM YL EQG+QHRNLHSHNVL+TK+WGAKVADYGLARTSEVMLGAHDRAK KS P + G LRWM+PELL+ +A D FTEASDVYSVGVIAWEVLCGGS LPYDG+ DDKV SMI+EGSTPPVSMETP+VY+KLMLLCWRKNP+SRP+FS +ASVLL+D PP+ KASPR
Sbjct: 76 HGMAKVGVALGVALAAGCCAPAARAASAGASHSCTVLVGGTIKCWGENFWGQVGQNDNLVRGKNASDMGDDLPYVQLGIFEADMVASGSEFNCARSVDGEVKCWGRNTAGQLGLGDNETRGGVNDVFEMGNDLPVVDLGTGVTVESIGLAGSHACAVTLIGLVKCWGENEGGQLGLGDKLARGNLTGQMGDDLPYVDLGTGVLASSVALGARHTCAVVDDGGVKCWGNNDGGQLGYEDTAARGTAAGE--MGDSLPFVDLGRDQKAVSVAAGFFHTCALLYTGDIKCWGFGSNGQLGQGTNESIGTSAGTMGDNLPPIDLGTGSTAIAMSLGGTHSCAVLDDYTVKCWGGNSVGTLGLGDVLNRGAEPGEMGDNLPAVDLDFGTGTGAVSNVFAGRFHTCVSGTEGGLVCFGLNSGGQLGAGTDETNIGDEPGEVAALSSVSLGTDEVAAVIAAPGEGLALKTISPTPAPTAERLTTPPVIMTR-SPVALTDAPLGGGRDSG-----PAD--LEEGNG----DSXXXXXXXXXXXXATAAILIPGFVLVGLFCCYRRRKRKEGELKR-PSAAV--GAGSGGXXXXXXXXXDSFTSSENNVEANGEGPTDTLANKPLVKPHALQSTAPMTGGQQAGGEAATAATAATVGDSAEGLPRPPTAAAVMAPGAAIPAGTPAAGTAG-----GDDDDSSRSDL----ENPGRLRRTGSNSSISTLGSTSTASSTWPND-GFVTPARNNIPRGAGGGRYGLG---------XXXXXXXEGLPPGYKTPGNLSAATPNREMTIPETPSPRSVSSSVHGTPAPPGMRIAQFLRVGG---GGGDTSLYGLPEMEIGRSTSNLYESNPSGSSWPVGSK-GGAPPTAASIAAXXXATGSAQPTPGDGANPSPINNATATSPTAELDTGGRMS-----------------NRSSRTAGASPTTWGAGGAWGDREGG-----GGMGAEAAAQAFTEEAELEALQIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYEAFAQELRAMKGIRHECVAAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKREGLTPAIRHKIIKDVASGMGYLYEQGLQHRNLHSHNVLVTKEWGAKVADYGLARTSEVMLGAHDRAKRKSXXXXXXXXP-----KVGALRWMAPELLQASADRSADLFTEASDVYSVGVIAWEVLCGGSKLPYDGIADDKVKSMIIEGSTPPVSMETPIVYHKLMLLCWRKNPSSRPSFSQMASVLLRDPPPVGKASPR 1303
BLAST of mRNA_C-linearis_contig10.510.1 vs. uniprot
Match: D7FP43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP43_ECTSI) HSP 1 Score: 557 bits (1435), Expect = 4.550e-179 Identity = 279/428 (65.19%), Postives = 325/428 (75.93%), Query Frame = 1 Query: 472 CVQLDGGSVKCWGENFHGQLGQNDALVRGKDNTTMGDNLPQVPLGTFSSVFVDSGGEFNCALDGVGAVKCWGRNEYGQLGLGDNGTRGGPLTDNDMGVNLTEVSLGTGVVVEKIALGGMHACAVIGEGELKCWGRNDRGQLGLNDTVFRGDNANEMGDNLPTVDLGTGVVVTSVAAGEAHTCAVIGDGDVKCWGNNDGGQLGYEDSLPRGTGAGQGLMGNALPVVDLGRDQKAITVAAGFFHTCAMLYTGVVKCWGFGSSGQLGQGNNVSIGNAAGTMGDDLPAVDLGTGRTAVALSLGATHSCAALDNFDLKCWGGNERGSLGLGDTMNRGALDGEMGDSLPAVELSFGAGGGEVSNVFAGRYHTCVSGTKGGLACFGINNGGQLGAETTDDALGDGPNEVNGISSITLGTGVVIADQPAPGADIEL 1755
CV L GG +KCWGEN+ GQ+GQND LVRG D + MGD+LP VPLG F + V SG EF+CAL GAVKCWGRN GQLGLGDN TRGG +MG NL + LGTGV VE IAL G HACAV+ +G LKCWG N+ GQLGL DT+ RG+ +MGDNLP VDLG V+V+SVA G HTCAV+GDGDVKCWGNNDGGQLGYED+ RG GQ MG+ LP VDLG Q+AI VAAGFFHTCA+LYTG +KCWGFGS+GQLGQG+N SIGNA +MGD+ VDLG RTA+A+SLG THSCAALD+ +KCWGGN GSLGLGD++NRG GEMGD+LP V LSFG G G SNVFAGR+HTCVSG +GGLACFG+N GGQLG+ + + +GD P EV ++SI LG G V++ APG + L
Sbjct: 28 CVVLVGGKIKCWGENYWGQVGQNDNLVRGDDASDMGDSLPYVPLGEFEASLVASGSEFSCALAVDGAVKCWGRNSSGQLGLGDNETRGGQDDAFEMGDNLPVLDLGTGVAVESIALAGSHACAVLADGNLKCWGENEGGQLGLGDTLTRGNAMGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAVGQ--MGDLLPAVDLGTKQRAIAVAAGFFHTCALLYTGDIKCWGFGSNGQLGQGSNASIGNAVDSMGDNFGPVDLGADRTAIAVSLGGTHSCAALDDSTVKCWGGNSVGSLGLGDSLNRGLGPGEMGDNLPTVGLSFGPGLGAASNVFAGRFHTCVSGAEGGLACFGLNAGGQLGSGSDETNIGDEPGEVKELTSIDLGAGEVVSVPDAPGLGVAL 453
BLAST of mRNA_C-linearis_contig10.510.1 vs. uniprot
Match: A0A6H5JFU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU1_9PHAE) HSP 1 Score: 489 bits (1259), Expect = 8.730e-151 Identity = 258/430 (60.00%), Postives = 310/430 (72.09%), Query Frame = 1 Query: 472 CVQLDGGSVKCWGENFHGQLGQNDALVRGKDNTTMGDNLPQVPLGTFSSVFVDSGGEFNCALDGVG-AVKCWGRNEYGQLGLGDNGTRGGPLTDN--DMGVNLTEVSLG--TGVVVEKIALGGMHACAVIGEGELKCWGRNDRGQLGLNDTVFRGDNANEMGDNLPTVDLGTGVVVTSVAAGEAHTCAVIGDGDVKCWGNNDGGQLGYEDSLPRGTGA---GQGLMGNALPVVDLGRDQKAITVAAGFFHTCAMLYTGVVKCWGFGSSGQLGQGNNVSIGNAAGTMGDDLPAVDLGTGRTAVALSLGATHSCAALDNFDLKCWGGNERGSLGLGDTMNRGALDGEMGDSLPAVELSFGAGGGEVSNVFAGRYHTCVSGTKGGLACFGINNGGQLGAETTDDALGDGPNEVNGISSITLGTGVVIADQPAP 1737
C L +VKC+G+N GQLGQ D+L RG + T MGDNLP VPLGTF + V SG EFNCA+ G +VKCWG+N+ GQLGLGD RGG L D +MG NL V +G+ VE ++LGG ACA++ G ++CWG N+ GQLGL DT RGD +EMGD+LP VDLGTG VV+SVA G H CA + DG VKCWGNNDGGQLGYED LPRGTG G G MG+AL VDLG Q+AI V AGFFHTCA+LY G +KCWGFGSSGQLGQG+N SIG+A TMGD+L +DLGTGRTAVA++LG TH+CA LDN LKCWG N GSLGLGD + RG GEMGD+L +V L+FG G G SNVFAG +H+CV+G++GGLACFG N GQLGA T++ +GD P EV ++S+ LG + +P
Sbjct: 34 CAVLSDATVKCFGDNLLGQLGQLDSLSRGLNATDMGDNLPTVPLGTFQAAAVYSGNEFNCAVSVDGDSVKCWGQNDGGQLGLGDTEARGG-LNDEVFEMGENLPTVDFSGNSGLSVESMSLGGSAACALLTGGSVRCWGANEAGQLGLGDTENRGDEPDEMGDDLPFVDLGTGAVVSSVAVGAKHACATMEDGVVKCWGNNDGGQLGYEDRLPRGTGVEIDGVGGMGDALAAVDLGLGQRAIAVEAGFFHTCALLYEGDIKCWGFGSSGQLGQGSNASIGDALNTMGDNLAPIDLGTGRTAVAVALGGTHTCAVLDNETLKCWGSNSLGSLGLGDAIPRGTGPGEMGDNLESVPLTFGDGEGAASNVFAGSFHSCVTGSEGGLACFGYNILGQLGAGTSE-TIGDEPGEVEALASVDLGERATVVAPVSP 461
BLAST of mRNA_C-linearis_contig10.510.1 vs. uniprot
Match: A0A6H5JPT1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT1_9PHAE) HSP 1 Score: 403 bits (1035), Expect = 2.420e-114 Identity = 385/1274 (30.22%), Postives = 533/1274 (41.84%), Query Frame = 1 Query: 574 MGDNLPQVPLGTFSSVFVDSGGEFNCALDGVGAVKCWGRNEYGQLGLGDNGTRGGPLTDNDMGVNLTEVSLGTGVVVEKIALGGMHACAVIGEGELKCWGRNDRGQLGLNDTVFRGDNANEMGDNLPTVDLGTGVVVTSVAAGEAHTCAVIGDGDVKCWG-NNDG----GQLGYEDSLPRGTGAGQGLMGNALPVVDLGRDQKAITVAAGFFHTCAMLYTGVVKCWGFGSSGQLGQGNNVSIGNAAGTMGDDLPAVDLGTGRTAVALSLGATHSCAALDNFDLKCWGGNER-----GSLGLGDTMNRGALDGEMGDSLPAVELSFGAGGGEVSNVFAGRYHTCVSGTKGGLACFGINNGGQLGAETTDDALGDGPNEVNGISSITLGTGVVIADQPAPGADIELXXXXXXXXXXXXXXXXXXXXXXXXSPVPGNGTPAPTGRSGGNPGDNPGDTGVEESGGAPDSGSSDDGRTATVAAIATAAVLIPLIALCALFYCWRRRKQKEGEF-----KRGPTAAVSGGAGAAG----GGSRGYGREDSFTSSENNAEANGEGGAETLSSKPLVKAHALQSTAPMTEGLENQGPAETLENSSEGLPRPAXXXXXXXXXXXXXXXXXXXXXXXXXXXYSDXXESSRDESSTPSENPSELRRSGSGSSISTLGSTSTASSTWPSDHGFVTPARTDIARGVG-GQYGAG---------GAGRXXXXXXSGSVTGSGGLDG------------------------FRTPANRAATSTIPETXXXXXXXXXXXXXXXXPEMRLAQFA--RNGGAGAGGVDTNLYG-LPEMEIGRSKSNVFDSNPVSTSWSVGSKAGGAPLTAASIAXXXXXXXXXXXXXXXXDSSSPHNSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKSSRTSTASPAG----RVGGAGWADKEGGVGGAGAGMGAEAAAQAFTEEAELEALQIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSRGVVGEEVTRLYASFAQELRAMKGIRHDCVVAVYGAVATPSELTIVTDLVKRGPLRTLLTDKKKREGLTPTIRHRIIKDVARGMAYLSEQGVQHRNLHSHNVLITKDWGAKVADYGLARTSEVMLGAHDRAKAKSGGSKRRPRPSPTPLRPGTLRWMSPELLRPAAADGVDPFTEASDVYSVGVIAWEVLCGGSTLPYDGLPDDKVTSMILEGSTPPVSMETPLVYNKLMLLCWRKNPASRPTFSHIASVLLKD-DPPLQKA 4212
M NLPQV LG + + V +G C L G V CWG NEYGQLGLGD RG + +DMG L V LGTG IA G H CA++ G LKCWGRN+ G LGL DT RG + MGD LP+VDLGTG +VAAG HTCA++ + +KCWG ND GQLG ++ GT GQ MG+ LP VDLG ++ A+ + G++HTC +L + C+G GQLGQG++ G A MGDD+ AVDLG GR VA++ G H+C +DN ++KC+G N G LGL DT+NRG +GD+LP V+L G G V FAG HTCV L C+G+N GQLG E TDD D +++I LG G+ +A P+P D + D+ G+ V G + T + AIA V ++A+ +F C RR ++G K P SG AG GG G ED + P A+++T P G + G DE+ + S + SE+R G V A IA G+ G G G + SV + G + N A + + LAQ+A R+ DT L G L ++ +G+ + VG G + + + S S S +S SP+G R G +E +G E +L+ LQI K D+ RPFA G SEVYQV H G +AAK +L GV +++ R++ F +EL + + D VV++YGA+A+P+ELT+V + ++RG +RT+L D ++R+ +TP RH ++ D A GMAYL + GVQHR+L S N L+T DW K++D+GL++T + + + SG R GT+ +M+PELL P A G P E SD YS GV+ W+V+CG P+ G+ + S++ +G + +E Y +LM+ CW K+P RPTF I K+ D P A
Sbjct: 1 MSSNLPQVDLGGNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTQHRG--TSSSDMGEGLAVVDLGTGRTATHIACGQYHTCAILDIGSLKCWGRNNYGALGLGDTDDRGQTNDTMGDQLPSVDLGTGHTALAVAAGRHHTCAILNNEALKCWGAKNDTMTNYGQLGQGNTDGIGTAPGQ--MGDNLPEVDLGTNRTAVALETGWYHTCVILDNKELHCFGRNFDGQLGQGDDEDRGCKAEQMGDDMVAVDLGEGRHPVAVAAGRWHTCVLMDNDEVKCFGANTAEDLGGGQLGLEDTINRGGSLDTIGDNLPPVDLGTGRVAGWV---FAGFDHTCVIFEDSSLKCWGLNASGQLGLEDTDDRGADIETMGVDLAAIELG-GLEVAIPPSPVFDAD--------------------------------------------DDDDGEVVV---------GDDEVLSTEWIIAIALTGVAGAIVAVGIMFLCCCRRLGRQGGKSGFCKKMNPFVTTSGTHHEAGHRTGGGDDARGLED------------------FAAFGPTDMVGAMRNTHPPNHGGQTPG----------------------------------------------------DETHSVSLSGSEVRV------------------------GAVVSAGATIAGGMALGLNMVGVLAESLPWIGVACHMLNHIADSVDTRDAMQGNMAKIKSWAICLRDVLVQMSRQMQTQPTVNARALQHMSTDVMSSLQTLVDTVASYNAKGTLAQYACSRSCQRAVDAADTALRGALTKLSVGQGAELIT---------MVGRLQGVGLVVDEKLDMIIEQLRKQEENAAKMELSLAKYSASMAEVLGRV-----------------------------SSVGSPSGDGKERPRSNGKTLRE---------LGKE----------QLDKLQISKEDVTYASKRPFASGSYSEVYQVIHEGVVKAAKKTNLARLGVGKKDIDRVFERFVKELYILSQMHSDRVVSMYGAIASPTELTLVMEFLERGSIRTILDDDRQRQSMTPVARHGLLLDTAEGMAYLYKNGVQHRDLKSANCLVTHDWRVKISDFGLSKTIDAI--STGSTSTMSGN-----------FRGGTMTYMAPELL-PGGAGGDVP-AELSDAYSFGVVVWDVVCGEGRTPWAGVRIYDLPSLLRKGERLDIPVECGRFYRRLMVSCWNKDPHRRPTFDSILKDTRKEADRPFSAA 1047
BLAST of mRNA_C-linearis_contig10.510.1 vs. uniprot
Match: D7FQH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH4_ECTSI) HSP 1 Score: 375 bits (964), Expect = 6.180e-114 Identity = 199/313 (63.58%), Postives = 232/313 (74.12%), Query Frame = 1 Query: 472 CVQLDGGSVKCWGENFHGQLGQNDALVRGKDNTTMGDNLPQVPLGTFSSVFVDSGGEFNCAL--DGVGAVKCWGRNEYGQLGLGDNGTRGGPLTDN-DMGVNLTEVSLG--TGVVVEKIALGGMHACAVIGEGELKCWGRNDRGQLGLNDTVFRGDNANEMGDNLPTVDLGTGVVVTSVAAGEAHTCAVIGDGDVKCWGNNDGGQLGYEDSLPRGTGA---GQGLMGNALPVVDLGRDQKAITVAAGFFHTCAMLYTGVVKCWGFGSSGQLGQGNNVSIGNAAGTMGDDLPAVDLGTGRTAVALSLGATHSCA 1386
C L +VKC+G+N GQLGQ D+L RG + T MGDNLP VPLGTF + V SG EFNCA+ DG G+VKCWG+NE GQLGLGD RGGP D +MG NL V +G+ VE ++LGG ACAV+ G ++CWG N+ GQLGL DT RGD +EMGD+LP VDLGTG VV+SVA G H CA + DG VKCWGNNDGGQLGYED LPRGTG G+G MG+AL VDLG Q+AI V AGFFHTCA+LY G VKCWGFGSSGQLGQG+N SIG+ TMGD+L +DLGTGRTAVA++LG TH+CA
Sbjct: 36 CAVLSDATVKCFGDNTLGQLGQLDSLSRGLEATDMGDNLPTVPLGTFEAAAVYSGNEFNCAVSVDG-GSVKCWGQNEGGQLGLGDTEARGGPNDDIFEMGENLPTVDFSGNSGLSVESMSLGGSAACAVLTGGSVRCWGANEVGQLGLGDTENRGDEPDEMGDDLPFVDLGTGSVVSSVAVGAKHACATMEDGTVKCWGNNDGGQLGYEDRLPRGTGVEIDGRGGMGDALAAVDLGLGQRAIAVEAGFFHTCALLYEGDVKCWGFGSSGQLGQGSNASIGDVLNTMGDNLAPIDLGTGRTAVAVALGGTHTCA 347
BLAST of mRNA_C-linearis_contig10.510.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO) HSP 1 Score: 372 bits (956), Expect = 2.670e-111 Identity = 207/426 (48.59%), Postives = 256/426 (60.09%), Query Frame = 1 Query: 472 CVQLDGGSVKCWGENFHGQLGQNDALVRGKDNTTMGDNLPQVPLGTFSSVFVDSGGEFN-CALDGVGAVKCWGRNEYGQLGLGDNGTRG-GPLTDNDMGVNLTEVSLGTGVVVEKIALGGMHACAVIGEGELKCWGRNDRGQLGLNDTVFRGDNANEMGDNLPTVDLGTGVVVTSVAAGEAHTCAVIGDGDVKCWGNNDGGQLGYEDSLPRGTGAGQGLMGNALPVVDLGRDQKAITVAAGFFHTCAMLYTGVVKCWGFGSSGQLGQGNNVSIGNAAGTMGDDLPAVDLGTGRTAVALSLGATHSCAALDNFDLKCWGGNERGSLGLGDTMNRGALDGEMGDSLPAVELSFGAGGGEVSNVFAGRYHTCVSGTKGGLACFGINNGGQLGAETTDDALGDGPNEVNG-ISSITLGTGVVIADQPAPG 1740
CV LD G +KCWG N GQLG D RG D MG+ LP V LGT + S G + CAL G++KCWG N GQLGLGD +RG GP +MG L ++LGTG I++GG+H CA++ G +KCWG N GQLGL DT RGD EMGD LP + LGTG +++ G HTCA++ +G +KCWG N GQLG D+ RG G G+ MG+ LP + LG + A ++AG +HTCA+L G VKCWG +GQLG G+ + G MGD LPAV LGTGRTA A+S G H+CA LDN +KCWG N G LGLGDT RG GEMGD+LPA+ L G +FAG YHTC G + C+G N GQLG T D GDGP E+ + +++LG G A G
Sbjct: 55 CVLLDNGYIKCWGANGAGQLGLGDTSYRGDDRGEMGNRLPAVALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLGDTSSRGDGP---GEMGDTLPAITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGE--MGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVKCWGANGNGQLGLGDTSYRSDGPGEMGDTLPAVVLGTGRTATAISAGYYHTCALLDNGYVKCWGYNSDGQLGLGDTSYRGNGPGEMGDTLPAITLGTGR---TAMAIFAGGYHTCALLDNGSVKCWGYNGNGQLGLGNTSDR-GDGPGEMGDMLPAVSLGMGRTATGNSAGG 471
BLAST of mRNA_C-linearis_contig10.510.1 vs. uniprot
Match: A0A0K1EHP4_CHOCO (Uncharacterized protein n=2 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EHP4_CHOCO) HSP 1 Score: 362 bits (928), Expect = 1.080e-105 Identity = 204/394 (51.78%), Postives = 242/394 (61.42%), Query Frame = 1 Query: 472 CVQLDGGSVKCWGENFHGQLGQNDALVRGKDNTTMGDNLPQVPLGTFSSVF-VDSGGEFNCALDGVGAVKCWGRNEYGQLGLGDNGTRG-GPLTDNDMGVNLTEVSLGTGVVVEKIALGGMHACAVIGEGELKCWGRNDRGQLGLNDTVFRGDNANEMGDNLPTVDLGTGVVVTSVAAGEAHTCAVIGDGDVKCWGNNDGGQLGYEDSLPRGTGAGQGLMGNALPVVDLGRDQKAITVAAGFFHTCAMLYTGVVKCWGFGSSGQLGQGNNVSIGNAAGTMGDDLPAVDLGTGRTAVALSLGATHSCAALDNFDLKCWGGNERGSLGLGDTMNRGALDGEMGDSLPAVELSFGAGGGEVSNVFAGRY-HTCVSGTKGGLACFGINNGGQLGAETT 1644
C L G VKCWG N GQLG D RG MGD LP V LGT +V + +G CAL G G+VKCWG N GQLGLGD RG GP +MG L V+LGTG I G H CA++ +G +KCWG N G+LGL DT RGD EMGD L VDLG G +++ G +H CA++ DG VKCWG N GQLG D+ RG GAG+ MG+ALP VDLG + A+ V AG FHTCA+L G +KCWG SG+LG G+ G+AAG MGD LPAVDLGTG+ AVALS+G SCA L++ KCWG N G+LGLGDT RG GEMGD+LPA++L GA + + RY HTC G L C+G N GQLG T
Sbjct: 204 CALLHDGRVKCWGRNVQGQLGLGDTEPRGDAADEMGDALPAVDLGTGVTVVGLAAGDNHTCALLGGGSVKCWGANTSGQLGLGDTAPRGDGP---GEMGDALPTVNLGTGRTALAIGGGDRHTCALLDDGSVKCWGFNTGGKLGLGDTAPRGDGPGEMGDALLAVDLGAGRTAAALSVGGSHACALLDDGSVKCWGGNGQGQLGLGDAEHRGDGAGE--MGDALPAVDLGTGKTAVAVHAGHFHTCALLNDGSLKCWGGNDSGELGLGDTAHRGDAAGEMGDALPAVDLGTGKKAVALSVGVFRSCALLEDASFKCWGNNTAGALGLGDTSRRGDGPGEMGDALPAIDLGAGAS----TTLVVTRYTHTCARLEAGNLKCWGGNTSGQLGLGDT 588
BLAST of mRNA_C-linearis_contig10.510.1 vs. uniprot
Match: A0A520PN85_9PROT (Big_5 domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A520PN85_9PROT) HSP 1 Score: 361 bits (926), Expect = 1.700e-105 Identity = 197/409 (48.17%), Postives = 251/409 (61.37%), Query Frame = 1 Query: 472 CVQLDGGSVKCWGENFHGQLGQNDALVRGKDNTTMGDNLPQVPLGTFSSVFVDSGGEF-NCALDGVGAVKCWGRNEYGQLGLGDNGTRGGPLTDNDMGVNLTEVSLGTGVVVEKIALGGMHACAVIGEGELKCWGRNDRGQLGLNDTVFRGDNANEMGDNLPTVDLGTGVVVTSVAAGEAHTCAVIGDGDVKCWGNNDGGQLGYEDSLPRGTGAGQGLMGNALPVVDLGRDQKAITVAAGFFHTCAMLYTGVVKCWGFGSSGQLGQGNNVSIGNAAGTMGDDLPAVDLGTGRTAVALSLGATHSCAALDNFDLKCWGGNERGSLGLGDTMNRGAL---DG--EMGDSLPAVELSFGAGGGEVSNVFAGR-YHTCVSGTKGGLACFGINNGGQLGAETTDDALGDGPNEV 1677
C L+ SVKCWG+N GQLG D RG MG NL V LGT + + CA+ ++KCWG+N+ GQLG G+ + G ++MG NLT + LGTG IA GG H CA++ +KCWG N GQLG+ T RGD ANEMGDNLP++DLGTG T++AAG AH+CA++ + VKCWG ND GQLG D+ RG GA + MG+ L VDLG + A+++ AG+ HTCA+L VKCWG + GQ+G G +G+AAG MGD L A+DLGTGRTA A+S G +H+CA LDN +KCWG N+ G LGLGDT NRG DG +MGD+LP+++L G V G HTC + C+G N GQLG TD + GDG NE+
Sbjct: 197 CTILENSSVKCWGKNDSGQLGLGDTNSRGDGANEMGANLSSVDLGTGRTAKAIAANRVATCAILDNSSIKCWGKNDRGQLGQGNTNSLGD--AGSEMGDNLTPIDLGTGRTATAIAGGGWHNCAILDNSSIKCWGINSAGQLGIGSTDDRGDGANEMGDNLPSIDLGTGRTATAIAAGGAHSCAILDNSAVKCWGKNDAGQLGLGDTNNRGDGADE--MGDDLDAVDLGTGRTAVSITAGYAHTCALLDNYSVKCWGDAAEGQMGTGKTFDLGDAAGEMGDSLTAIDLGTGRTATAISAGRSHTCAMLDNSSIKCWGSNDSGQLGLGDTSNRGNTVQGDGSSQMGDNLPSIDLGTGR---TARGVITGEGLHTCTIMDNSSIKCWGYNASGQLGIGDTD-SRGDGANEM 597
BLAST of mRNA_C-linearis_contig10.510.1 vs. uniprot
Match: A0A835T094_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T094_9CHLO) HSP 1 Score: 383 bits (983), Expect = 1.760e-104 Identity = 213/415 (51.33%), Postives = 257/415 (61.93%), Query Frame = 1 Query: 472 CVQLDGGSVKCWGENFHGQLGQNDALVRGKDNTTMGDNLPQVPLGTFSSVFVDSGGEFN-CALDGVGAVKCWGRNEYGQLGLGDNGTRGGPLTDNDMGVNLTEVSLGTGVVVEKIALGGMHACAVIGEGELKCWGRNDRGQLGLNDTVFRGDNANEMGDNLPTVDLGTGVVVTSVAAGEAHTCAVIGDGDVKCWGNNDGGQLGYEDSLPRGTGAGQGLMGNALPVVDLGRDQKAITVAAGFFHTCAMLYTGVVKCWGFGSSGQLGQGNNVSIGNAAGTMGDDLPAVDLGTGRTAVALSLGATHSCAALDNFDLKCWGGNERGSLGLGDTMNRGALDGEMGDSLPAVELSFGAGGGEVSNVFAGRYHTCVSGTKGGLACFGINNGGQLGAETTDDALGDGPNEVNG-ISSITLGTG 1710
C LD GSVKCWG N+ GQLG D RG MGD LP V LGT + S G ++ CAL G+VKCWG N+YG LGLGD RG L +MG L V+LGTG I+ GG H CA++ G +KCWG N GQLGL DT RGD EMGD LP V LGTG T+++AG HTCA++ +G VKCWG ND G LG D+ PRG G G+ MG+ LP V LG + A + AG HTCA+L G VKCWG G LG G+ G+ G MGD LPAV LGTGRTA A+S G+ ++CA LDN +KCWG N+ G LGLGDT RG GEMGD+LPAVEL G +S AG +HTC G + C+G N+ GQLG T + GDGP+E+ + ++ LGTG
Sbjct: 1520 CALLDNGSVKCWGYNYDGQLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAISVGSWHTCALLDNGSVKCWGYNDYGYLGLGDTSRRGNEL--GEMGDRLPAVALGTGRTATAISAGGWHTCALLDNGSVKCWGWNQFGQLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAISAGVLHTCALLDNGSVKCWGCNDYGYLGLGDTSPRGDGPGE--MGDTLPAVALGTGRTATAIFAGVLHTCALLDNGSVKCWGCNDYGYLGLGDTSYRGDGPGEMGDTLPAVALGTGRTATAISAGSRYTCALLDNGSVKCWGWNDDGQLGLGDTSRRGDGPGEMGDTLPAVELGTGRTATAIS---AGGWHTCALLDNGSVKCWGYNDAGQLGLGDTSNR-GDGPSEMGDTLPAVALGTG 1926
BLAST of mRNA_C-linearis_contig10.510.1 vs. uniprot
Match: A0A812PTZ1_9DINO (UVR8 protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812PTZ1_9DINO) HSP 1 Score: 348 bits (892), Expect = 7.050e-101 Identity = 190/381 (49.87%), Postives = 236/381 (61.94%), Query Frame = 1 Query: 490 GSVKCWGENFHGQLGQNDALVRGKDNTTMGDNLPQVPLGTFSSVFVDSGGEFNCALDGVGAVKCWGRNEYGQLGLGDNGTRGGPLTDNDMGVNLTEVSLGTGVVVEKIALGGMHACAVIGEGELKCWGRNDRGQLGLNDTVFRGDNANEMGDNLPTVDLGTGVVVTSVAAGEAHTCAVIGDGDVKCWGNNDGGQLGYEDSLPRGTGAGQGLMGNALPVVDLGRDQKAITVAAGFFHTCAMLYTGVVKCWGFGSSGQLGQGNNVSIGNAAGTMGDDLPAVDLGTGRTAVALSLGATHSCAALDNFDLKCWGGNERGSLGLGDTMNRGALDGEMGDSLPAVELSFGAGGGEVSNVFAGRYHTCVSGTKGGLACFGINNGGQLG 1632
G+VKCWG N GQLG D RG T MGD LP V LG +V V +GG CA+ VKCWG N YGQLGLGD+ RG ++G L V LG+G +V ++A G H CA + + KCWGRND GQLG+ DT RGD EMGD LP+VD+GTG V +A G+ HTCA++ D VKCWG+ GQLGYE + RG A + +G+ LPVVD+G + + + AG HTCA L G KCWG G LG +N + G+AAG MGD+LPAVDLG GR+AV L G H+CA LDN +LKCWG N G LGLGD RG L MG++LP+++L GA ++ G YHTC G + C+G N+ GQLG
Sbjct: 36 GTVKCWGSNGSGQLGLGDNSDRGDTATEMGDALPTVDLGLKLAVNVVAGGTHTCAILDDLTVKCWGLNTYGQLGLGDSSARGNQA--GELGDVLPPVDLGSGNLVIEVAAGASHTCARLFDNTTKCWGRNDYGQLGVGDTSNRGDATGEMGDALPSVDVGTGRSVLGLAVGDLHTCALLDDSSVKCWGSASDGQLGYESTYGRGHKAEE--LGDHLPVVDVGTGRSVLQIVAGDSHTCARLDDGTAKCWGKNGLGNLGLEDNSNRGDAAGQMGDNLPAVDLGAGRSAVWLDAGGEHTCAVLDNLELKCWGYNAYGQLGLGDASTRGYLSNSMGENLPSLDLGSGA---VPMHLSTGLYHTCA-GLGDAIKCWGYNSDGQLG 408 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.510.1 >prot_C-linearis_contig10.510.1 ID=prot_C-linearis_contig10.510.1|Name=mRNA_C-linearis_contig10.510.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1356bp MESPATCADGARRHRRNRHGSSIGSTSSRDTAACCRRPAAGVAPQTRKSDback to top mRNA from alignment at C-linearis_contig10:1598487..1622672- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.510.1 ID=mRNA_C-linearis_contig10.510.1|Name=mRNA_C-linearis_contig10.510.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=24186bp|location=Sequence derived from alignment at C-linearis_contig10:1598487..1622672- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1598487..1622672- >mRNA_C-linearis_contig10.510.1 ID=mRNA_C-linearis_contig10.510.1|Name=mRNA_C-linearis_contig10.510.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=8136bp|location=Sequence derived from alignment at C-linearis_contig10:1598487..1622672- (Chordaria linearis ClinC8C monoicous)back to top |