mRNA_C-linearis_contig10.503.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.503.1

>prot_C-linearis_contig10.503.1 ID=prot_C-linearis_contig10.503.1|Name=mRNA_C-linearis_contig10.503.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=431bp
MWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANV
QAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEAL
TRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAK
ERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSK
CLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEE
DAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGRED
RDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGS
EDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDIL
ESWTILRPKKGTYQMLDAHSTFAREKLMDRG
back to top

mRNA from alignment at C-linearis_contig10:1524488..1526347-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.503.1 ID=mRNA_C-linearis_contig10.503.1|Name=mRNA_C-linearis_contig10.503.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1860bp|location=Sequence derived from alignment at C-linearis_contig10:1524488..1526347- (Chordaria linearis ClinC8C monoicous)
AGAAAAGCGTAGGGGCAGAAATGTGGAGGTCTGGTGAGATCGAGGGTGAA ATCGCAGGACTGCACGTAAGGATCGACCAGCTGACAAGCGACATGGGTTT AGTGGGCATCGCCATGATCGTGAAAAGGGTCGACGAAATACAGCAACACT CGGTGAGATGCTCTTTCGGAGTATAGCTTTCTTTTGCTCACCGCTACATA CTCCAGACCCATGATCACAACACGCGAAACACCGCTCCGGCTTCATTGCC CCGCCACCGCGTGAGAGTTGGTTCCGACGAAATTTTCGCAATCCTTCACG CATCGTTTGGTTGCAAGTATTGTGAACAGTCTAGTGCGATAATGACCCCG CGGTAAGAACAGTGGCTAAGCGCGAAGGTGGATGGTTCCCAGAACCTTAT GTGTGCGGTTTGATCTTGAAATAGTTTCCTACACCAAGCGGCCGGTCCGC TGGAGTATTTCTCGAGATACGTCGACCCCCTGCTTGCAGTACGGGCTAAA CAAGGAATAGGCGTTTTTCACCATATGACTTTCGAATTGCACGTTCGAAG GAAGAAGTTGGTTTGTTCTTCCGAGCAGACTGGGGGATGCTCTTGTTCGG AGACACCACCATTCGAAACCCAATGCTCATAGATCGCGATATATTCTGTC TTGAAACCACAACCTTCCTGCATCTATCTTGTGAATCGTACATCCTCAGG AAGCTCAAGCCAACGTTCAGGCCCACATCCTGGTAAACACTACCGCCATT TTGGACCGTCTCCCTCCGCCAATGGTCAAGCTAGCCAAAGTCCCCAAGGG CACGCTGGCACACAAACCCTGGCACGTGGAACGCCGCCATGTCATGAACA CGGTGTTGGAGGCGCTCACACGTGATGGCGCGCCGCCGCTAGTGGGGCTC GTGGGCGGTAGTGGGTCAGGCAAGACCACGGCCGCGTCCGAGATCATCAG GAGCGACGAGGTCCGTTCGGCCTTCGCCGGCGGTATCGTGTGGCTAACGG TCAACGACGGCGCAAAAGAGCGTCTCCCGCCCTTGATGCGACAGCTGGCT CGCATGGTGTACGAAATTGTCGGGAAAAGCGTGGGGCGCCCGCCGGCTCA ATCGGACGACGGCACGGCCTATATCAAGCGATTCGTGGAGAGAGGTCATG GTGGGAAAGGGTCGAAGTGTCTCGTGGTGGCCGACAACGTGTGGGAGGAG GAGGTAATCTCGAAGCTGCTGGAGACGGGAATGTCGGTTCTGGTGTCGAC CCGCCATGAAGAGCTGGTGACGGGTGCAGGTGGCGAAGCCGTGAGAGTTG ACGAGCTGTCCGAAGAGGATGCTGAGTTGTTGTTGACGAAAGCGGCGGAG CTACCCCAGGCGGCACGCTTGCCCGACGCGGCCGTAGACCTCGTCGAGTT GTGCGGCCGTGTGGCGATGGACCTGGCATTTGTGGGCCGGTGGAGCACCG TTCGCGGCAGGGAAGACCGTGATGCTTGGTCCGAAGCGGCGGGAAAAGTC CATGCAGAGATCGACAAAATTGGATGCGATCCTGAAAACGAAACGGCTGA GAGCTCTCATGTAACATGGCGGAAGGCCATTCTGCGGGCCGGCTTCGAGG ATCTCGCGGTTGGCTCGGAGGACAAGAGAGTACCTCGGCTGTATTTGGCG CTTTCCGTGATACCGGATGGCCATGAGTTCACCGTGAAGGATGCTGCTGT CCTGCTGTTCGATCGGGAGTTTAGCGCCGAAGACGAGGCATCGGTGGGGA AAGTGGTGGACATCCTCGAAAGCTGGACCATTCTCAGGCCCAAGAAAGGG ACGTATCAAATGCTCGACGCCCACTCGACCTTTGCGAGGGAGAAGTTGAT GGACCGTGGG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig10:1524488..1526347-

>mRNA_C-linearis_contig10.503.1 ID=mRNA_C-linearis_contig10.503.1|Name=mRNA_C-linearis_contig10.503.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2586bp|location=Sequence derived from alignment at C-linearis_contig10:1524488..1526347- (Chordaria linearis ClinC8C monoicous)
ATGTGGAGGTCTGGTGAGATCGAGGGTGAAATCGCAGGACTGCACGTAAG
GATCGACCAGCTGACAAGCGACATGGGTTTAGTGGGCATCGCCATGATCG
TGAAAAGGGTCGACGAAATACAGCAACACTCGATGTGGAGGTCTGGTGAG
ATCGAGGGTGAAATCGCAGGACTGCACGTAAGGATCGACCAGCTGACAAG
CGACATGGGTTTAGTGGGCATCGCCATGATCGTGAAAAGGGTCGACGAAA
TACAGCAACACTCGGAAGCTCAAGCCAACGTTCAGGCCCACATCCTGGTA
AACACTACCGCCATTTTGGACCGTCTCCCTCCGCCAATGGTCAAGCTAGC
CAAAGTCCCCAAGGGCACGCTGGCACACAAACCCTGGCACGTGGAACGCC
GCCATGTCATGAACACGGTGTTGGAGGCGCTCACACGTGATGGCGCGCCG
CCGCTAGTGGGGCTCGTGGGCGGTAGTGGGTCAGGCAAGACCACGGCCGC
GTCCGAGATCATCAGGAGCGACGAGGTCCGTTCGGCCTTCGCCGGCGGTA
TCGTGTGGCTAACGGTCAACGACGGCGCAAAAGAGCGTCTCCCGCCCTTG
ATGCGACAGCTGGCTCGCATGGTGTACGAAATTGTCGGGAAAAGCGTGGG
GCGCCCGCCGGCTCAATCGGACGACGGCACGGCCTATATCAAGCGATTCG
TGGAGAGAGGTCATGGTGGGAAAGGGTCGAAGTGTCTCGTGGTGGCCGAC
AACGTGTGGGAGGAGGAGGTAATCTCGAAGCTGCTGGAGACGGGAATGTC
GGTTCTGGTGTCGACCCGCCATGAAGAGCTGGTGACGGGTGCAGGTGGCG
AAGCCGTGAGAGTTGACGAGCTGTCCGAAGAGGATGCTGAGTTGTTGTTG
ACGAAAGCGGCGGAGCTACCCCAGGCGGCACGCTTGCCCGACGCGGCCGT
AGACCTCGTCGAGTTGTGCGGCCGTGTGGCGATGGACCTGGCATTTGTGG
GCCGGTGGAGCACCGTTCGCGGCAGGGAAGACCGTGATGCTTGGTCCGAA
GCGGCGGGAAAAGTCCATGCAGAGATCGACAAAATTGGATGCGATCCTGA
AAACGAAACGGCTGAGAGCTCTCATGTAACATGGCGGAAGGCCATTCTGC
GGGCCGGCTTCGAGGATCTCGCGGTTGGCTCGGAGGACAAGAGAGTACCT
CGGCTGTATTTGGCGCTTTCCGTGATACCGGATGGCCATGAGTTCACCGT
GAAGGATGCTGCTGTCCTGCTGTTCGATCGGGAGTTTAGCGCCGAAGACG
AGGCATCGGTGGGGAAAGTGGTGGACATCCTCGAAAGCTGGACCATTCTC
AGGCCCAAGAAAGGGACGTATCAAATGCTCGACGCCCACTCGACCTTTGC
GAGGGAGAAGTTGATGGACCGTGGGGAAGCTCAAGCCAACGTTCAGGCCC
ACATCCTGGTAAACACTACCGCCATTTTGGACCGTCTCCCTCCGCCAATG
GTCAAGCTAGCCAAAGTCCCCAAGGGCACGCTGGCACACAAACCCTGGCA
CGTGGAACGCCGCCATGTCATGAACACGGTGTTGGAGGCGCTCACACGTG
ATGGCGCGCCGCCGCTAGTGGGGCTCGTGGGCGGTAGTGGGTCAGGCAAG
ACCACGGCCGCGTCCGAGATCATCAGGAGCGACGAGGTCCGTTCGGCCTT
CGCCGGCGGTATCGTGTGGCTAACGGTCAACGACGGCGCAAAAGAGCGTC
TCCCGCCCTTGATGCGACAGCTGGCTCGCATGGTGTACGAAATTGTCGGG
AAAAGCGTGGGGCGCCCGCCGGCTCAATCGGACGACGGCACGGCCTATAT
CAAGCGATTCGTGGAGAGAGGTCATGGTGGGAAAGGGTCGAAGTGTCTCG
TGGTGGCCGACAACGTGTGGGAGGAGGAGGTAATCTCGAAGCTGCTGGAG
ACGGGAATGTCGGTTCTGGTGTCGACCCGCCATGAAGAGCTGGTGACGGG
TGCAGGTGGCGAAGCCGTGAGAGTTGACGAGCTGTCCGAAGAGGATGCTG
AGTTGTTGTTGACGAAAGCGGCGGAGCTACCCCAGGCGGCACGCTTGCCC
GACGCGGCCGTAGACCTCGTCGAGTTGTGCGGCCGTGTGGCGATGGACCT
GGCATTTGTGGGCCGGTGGAGCACCGTTCGCGGCAGGGAAGACCGTGATG
CTTGGTCCGAAGCGGCGGGAAAAGTCCATGCAGAGATCGACAAAATTGGA
TGCGATCCTGAAAACGAAACGGCTGAGAGCTCTCATGTAACATGGCGGAA
GGCCATTCTGCGGGCCGGCTTCGAGGATCTCGCGGTTGGCTCGGAGGACA
AGAGAGTACCTCGGCTGTATTTGGCGCTTTCCGTGATACCGGATGGCCAT
GAGTTCACCGTGAAGGATGCTGCTGTCCTGCTGTTCGATCGGGAGTTTAG
CGCCGAAGACGAGGCATCGGTGGGGAAAGTGGTGGACATCCTCGAAAGCT
GGACCATTCTCAGGCCCAAGAAAGGGACGTATCAAATGCTCGACGCCCAC
TCGACCTTTGCGAGGGAGAAGTTGATGGACCGTGGG
back to top