mRNA_C-linearis_contig10.503.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 491 bits (1265), Expect = 2.590e-161 Identity = 263/436 (60.32%), Postives = 315/436 (72.25%), Query Frame = 3 Query: 42 EGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEI------------QQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGTYQMLDAHSTFAREKLMDRG 1313 +G+I L R+ L D+ L GIA + K + ++ + Q +L T IL +LP P K+A VPKGT HK WHVERR+V TV +AL DG P LVGLVG SG+GKTTAAS I+ S VR F+ GIVWL VN+G + LP LM QLA+MV+E +G SVGR P+ SDDG AY+K+ VE GHGGKG KCLVVADNVWE +V+S+LLETGM +L+STR EELV A GE V VDELSE +AE +L +AAEL ARLPD A DL+ELCGRVAMDLAFVGRWSTVRGR+DR AWS+AA KV AE+DK G E+ +E S V R+AIL+AGFEDLA+GS+D+RV RLYL+L+V+PDGH FTVKDAAVLL+DRE EDEASVG VV+ LE WTI+R + TY+M DAHS FARE LMDRG Sbjct: 124 KGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEATYRMHDAHSNFARESLMDRG 559
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 490 bits (1262), Expect = 3.530e-161 Identity = 268/435 (61.61%), Postives = 319/435 (73.33%), Query Frame = 3 Query: 48 EIAGLHVRIDQLTSDMGLVGIAMIVKRVDE----IQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGTYQML---------DAHSTFAREKLMDRG 1313 EIA + I L +D+ L G+A++ + + +++ QA Q IL NT +I+DRL KLAK+PK T K WHVER +VM V EALT G P LVGLVG SGSGKTTAASEI+RS+EVR AF+ G+VWLTVN GAK+RLP LM QLA M+ E VG GR PA SDDG AYIK ++RGHGGKG KCLVVADNVWE+EV+ KLLETGM VL+STR EELV G+ GE V VDE+SE +AE +L KA+ELP RLPD AVDL+ELCGRVAMDLAFVGRWSTVRGR DR AWS+AAGKV AE+ KI + + T + RKA+L+AGFEDLA GS+D+RV RLYL+L+V+PDG FTVKDAAVLL+DR+ SAEDEAS VV+ILE W++LR +G Y+M DAHS FAREKLMDRG Sbjct: 134 EIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVG---GRRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRG 565
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 476 bits (1226), Expect = 5.890e-156 Identity = 248/422 (58.77%), Postives = 317/422 (75.12%), Query Frame = 3 Query: 48 EIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGTYQMLDAHSTFAREKLMDRG 1313 EIAGL+ +D+LT+D+GL GIA++ +VD++++ L L+ LP KLA VP G K WHVERRH M TVL+AL +V L G SGSGKTT A+EI+RS EVR AF+ GIVWL VN+GAK+RLP LM QLARMV+E +G SVGR P+ S+D YIK+ +E GH G+ KCLVVADNVWEE+V+SKL+ETGM VL+STR E +V + G+AV VDELS+ DAE +L +AAELP+ +RLPD AVDL++LCGRVAMD+AFVGRWSTVRGR D +WS+AA + E++K+G DP+N++AE+ RKAIL+ GFEDLA+GS+D+RV RLYL+L+V+PDGH F++KDAAVLL+DR S EDEAS G VVD+LE W+I+R +GTY+M DAH+ FARE L+DRG Sbjct: 126 EIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKK-----------TLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGTYRMHDAHTDFARECLLDRG 536
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 472 bits (1214), Expect = 3.790e-155 Identity = 252/388 (64.95%), Postives = 294/388 (75.77%), Query Frame = 3 Query: 159 QANVQAHILVNTTAILD---RLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGTYQMLDAHSTFAREKLMDRG 1313 QA Q IL N + ILD +L KL KVPKGT A K W+V+RRHVM+TV E L DG P LVGLVGGSGSGKTT ASE +RS EV+ AF+ GI WL+VNDGAKERL LM QLAR+VYE +G SVGR P SDD AYI++ +++G GGK KCLVVADNVWE+EV+SKLLETGM VL+STR+ LVT A GE V VDELSE DA +L +AAELP ++P AVDL+ELCGRVAMDLAFVGRWSTVRGR+DR AWS+A KV E+ K+G +E + RKAILRAGFEDLA+GS+D+RV RLYL+L+V PDGH FTV+DAAVLL+DRE AEDEASV VVD LE WT+LR ++G Y+M DAHS FARE LMD G Sbjct: 5 QAASQERILENQSKILDHMDQLSKTQAKLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGAYRMHDAHSIFARETLMDHG 392
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 451 bits (1159), Expect = 1.600e-147 Identity = 247/427 (57.85%), Postives = 305/427 (71.43%), Query Frame = 3 Query: 48 EIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQ---QHSEA-QANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGA-GGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGTYQMLDAHSTFAREKLMDRG 1313 EIAGL R++ L D+ L GIA + +V++++ +H + QA + L N + R+ LA VP GT A K WHVERRHVM V +AL +G P LVGLVG SGSGKTTAA+EI+RS EVR AF+ GIVWL+VNDGA ERL LM LAR+V+E +G SVGR PA DDG AY ++ ++ GHGGKG KCLVVADNVWEE VISKLLETGM VL+STR E LV A GG V VDELSEEDA +L +A+EL RLPD AV+LVELCGRVAMD+AFVGRWSTVRGR DR AWS+AA KV ++I++ ++ RKA+L+AGFEDLA+GS+D+R+PRLYL+L+V+PDGH FT KDA LL+DR EDE S +++ LE W+ LR + G Y+M DAHS FAR+ +MDRG Sbjct: 112 EIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRV---SDNVWDIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDCVMDRG 535
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 439 bits (1128), Expect = 2.440e-146 Identity = 239/394 (60.66%), Postives = 291/394 (73.86%), Query Frame = 3 Query: 138 IQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSD-DGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKG-TYQMLDAHSTFAREKLMDRG 1313 ++Q + QA + +L N I+DRLP P +K A VP+GT K WHVER HV TV+EALT + P LVGLVG SG+GKTTAA+E++RS+ VR +F+ GIVWLTVN GA +RLP LM QLARMV E +G VG P +S + AYIK+ +E GHGGKG KCL VADNVWE+EV+S LL+TGM+VL+STRHEELVTGA G VR+DELS DAE +L AAELP A RLPD AVDL++LCGRVAMDLAFVGRWSTVRGR DR AWS+AA KV AEI KI D + + + RKAIL+AG EDLA+GS+D+RV RLYL+L+V+PD V DAA+LL+DR+ +AEDE SV +V+D+LE W++LR Y M D S FAR LMDRG Sbjct: 66 MEQMVQNQAAARKELLANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVER-HVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGD---DIVDGARGNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRG 455
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 424 bits (1091), Expect = 1.360e-136 Identity = 243/435 (55.86%), Postives = 291/435 (66.90%), Query Frame = 3 Query: 48 EIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVQAH----ILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGTYQML---------DAHSTFAREKLMDRG 1313 +IA + I L +++ L G+A++ + +++ E A +QA IL NT I DRL K AK+PK T K WHVER V+ V E LT DG PPLVGLVG SGSGKTTAASEI+RS+E +RLP LM QLA MVYE +G GR PA SDDGTAYIK + RGHGG+G KCL V DNVWE+EV+ +LLE GM VL+STR EELVTG GE V V+ELSE +AE +L KAAELP RLPD AVDL+ELCGRVAMDLAF GR STVRGR DR AWS+AA KV E+ K C+ T + RKA+++AGF DLA+GS+D+RV RLYL+L+V+PDG FTVKDAAVL++DR SAEDEAS VV+ILE W+ L +G Y+M DAHS FAREKLMDRG Sbjct: 108 QIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEIG---GRRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRG 520
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 271 bits (693), Expect = 1.100e-78 Identity = 183/452 (40.49%), Postives = 249/452 (55.09%), Query Frame = 3 Query: 48 EIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEII------------------RSDEVRSAFAGGIVWLTVN--DGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDG--TAYIKRFVERGHGGKGS-----KCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETA-ESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEAS------VGKVVDILESWTILRPKKGTYQMLDAHSTFAREKL 1301 E+ L+ R+D LT D+GL GIA + +VD+++ + A ++ T P V +A VP G WHV R V++ V E L+ P +VGLVG SGSGKTT A+ I+ R + VR F G+VWL V G+ ER+P LM QLA+ V+E + S G P S G +A+I FV GKGS +CLVVAD+VWE +++ +L TGM VL ++R +LV G V VD+LS+ +AE LL AAEL + LP AA ++E C R+A L FVGRWSTV+G +D + W+EA + AE+ + + + + E R AILRAGF DLA +++ P LYL+L+V+PDG F K+AAV LFD AE+ AS KVV LE W ++ ++M DAHS FAR KL Sbjct: 170 ELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKA-------MLAEVIAQNTM------PASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVR----GKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLA--AQNGFNPLLYLSLAVMPDGRAFGAKEAAVFLFDDW--AEERASQRRTRQAAKVVANLEQWAVVTMHGNLFRMHDAHSDFARNKL 600
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE) HSP 1 Score: 253 bits (645), Expect = 3.680e-71 Identity = 175/464 (37.72%), Postives = 255/464 (54.96%), Query Frame = 3 Query: 15 AEMWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVQAHILVNTTAILDRLPP-PMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRS-----------------------DEVRSAFAGGIVWLTVN--DGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVE-LCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDR---EFSAEDEASVGKVVDILESWTILRPK-KGTYQMLDAHSTFAREKLMDRG 1313 A+ R G+ +I L RI+ + MGL G+ I+ R+++++Q IL RL P P KLA VP G A + WH R HV + V + L+ D P + L G SG+GK+TAA++++R+ + VR+ F+ G+V+L V +GA +RLP LMR+LA+ ++E V K P + G +Y+K+ + R +CLVVAD+VWE V++KL ETGM VL++TR E+V E V VD+L+ +AE +L AAELP+ RL D A+ +++ +CG VAMD+AFVG WS VR +D AW+EA K++ I + D + S V R ILRAGF+ L E +LY+A++V PDG+ F V DAAVLL D + + + ++ILE W +L G Y+M D H FAR+K+ D+G Sbjct: 197 AQFRRDGD---DIQRLRARIEAIVPIMGLAGVVNIMDRLEDVRQ------------------ILARLQPRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYKILSGD-EPAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEAGEKGESYVKKMMTR----TKKRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVEP--NEGVDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDSGAWAEAVSKINDTIVDVREDADG--MNDSQVK-RLGILRAGFDYLGE-EEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASGKYRMHDTHMDFARDKIRDQG 628
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 239 bits (611), Expect = 4.240e-66 Identity = 173/443 (39.05%), Postives = 240/443 (54.18%), Query Frame = 3 Query: 15 AEMWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEII--RSDEVRSAFAGGIVWLTVND--GAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGR----EDRDAWSEAAGKVHAEIDKIGCDPE--NETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGT-YQMLDAHSTFAREKLMDR 1310 A+ R GE +I L RI+ + MGL G+ +++D+I L RL P KLA VPK K +HV R V++ V + L DG P + L GGSG+GKTT+A+ ++ R D VR+ F G+VWL V G +RLP LM LA+ ++E V K P DDG +Y+++ V + + +CLVVAD+VWE V+ KL ETGM VL++TR E+ G E V +D L +AE +L AAELP RL DA++ ++E+CGRVAMD AFVG W++VR + AW ++ A+ID + + N ++ R A+LRAGF+ +G ED LY+ L+V P+G F DAAVLL E+E + ILE W +LR Y+ DAH+ FAR+KLMDR Sbjct: 119 AQFRRDGE---DIQRLRKRIEDVVPIMGLSGVVNNGEKLDQI---------------------LARLQPGP-KLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPT-GDDGVSYVRKIVSQ----EKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEM--GEPEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFK--YIGREDPLAQELYVKLAVFPEGFLFGESDAAVLL-------ENEEVAKGPISILERWGVLRTDASEKYRTHDAHADFARKKLMDR 520 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.503.1 >prot_C-linearis_contig10.503.1 ID=prot_C-linearis_contig10.503.1|Name=mRNA_C-linearis_contig10.503.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=431bp MWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVback to top mRNA from alignment at C-linearis_contig10:1524488..1526347- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.503.1 ID=mRNA_C-linearis_contig10.503.1|Name=mRNA_C-linearis_contig10.503.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1860bp|location=Sequence derived from alignment at C-linearis_contig10:1524488..1526347- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1524488..1526347- >mRNA_C-linearis_contig10.503.1 ID=mRNA_C-linearis_contig10.503.1|Name=mRNA_C-linearis_contig10.503.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2586bp|location=Sequence derived from alignment at C-linearis_contig10:1524488..1526347- (Chordaria linearis ClinC8C monoicous)back to top |