Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 286 |
| Cds size | 282 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927322.529088-CDS-C-linearis_contig10:1059372..1059514 | 1622927322.529088-CDS-C-linearis_contig10:1059372..1059514 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1059373..1059514 + |
| 1690879625.913727-CDS-C-linearis_contig10:1059372..1059514 | 1690879625.913727-CDS-C-linearis_contig10:1059372..1059514 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1059373..1059514 + |
| 1622927322.5381734-CDS-C-linearis_contig10:1060261..1060401 | 1622927322.5381734-CDS-C-linearis_contig10:1060261..1060401 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1060262..1060401 + |
| 1690879625.9243577-CDS-C-linearis_contig10:1060261..1060401 | 1690879625.9243577-CDS-C-linearis_contig10:1060261..1060401 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1060262..1060401 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.475.1 >prot_C-linearis_contig10.475.1 ID=prot_C-linearis_contig10.475.1|Name=mRNA_C-linearis_contig10.475.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=94bp
PTHNSPHTLVNTSQQQQQQEKQQQQQQQQPISAHAHHASSHTCATRKVLG
QQQLLLLHTPGNYRSAVYWYYCCSARPSPDSQLSQHMSRSRSSS back to topmRNA from alignment at C-linearis_contig10:1059373..1060403+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.475.1 ID=mRNA_C-linearis_contig10.475.1|Name=mRNA_C-linearis_contig10.475.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1031bp|location=Sequence derived from alignment at C-linearis_contig10:1059373..1060403+ (Chordaria linearis ClinC8C monoicous)
CCCACACACAACAGCCCACACACCCTCGTAAACACTTCACAGCAGCAGCA
GCAGCAGGAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATTTCAGCTC
ACGCACACCACGCTTCCTCACACACGTGCGCGACAAGGAAAGGTGAGAGG
ACAGACCCAGTGGCAAGTGCCCCGCCGCACGGGTAAGGTTCTGATGCCGC
GGCCCTCGAGGTGTGTTGCGGTCCGTGGCAGCCAATAATAGCGCGTGCAC
ATGTTTGTTTATACCACAGGCTCCGGCTGGGCGGTCCCATCTTTGTGTAT
GCTTGAGACCGGTAGCAACTGCCCGATTGATGGCCGCATGTGCGATACAC
CGGAGTAACACATGTCGTGAGATTGCTTCGTTACTTGCTGGCCCACCACG
GGGTGCTTTTTCTCTCTCGCTCCTCAGACAGAACACATATATATATATGC
ACCCGCCTTTGAAAAACTGCGTTTTTCATGTGCTGCTGCTGCTGCTGCTG
CAGTCTACGCTGGCTACGCTGGCGGGTGTTGTGCGTACTCCTACAGAAGG
AATAGTTTTGGTTCTCTTACCTGCGGCGCACACCACAAACCACCTGCTCC
CTCCCTGCTGTGTGCGCCGCGCGGTGCATATCATACAACAAGTTATTGCT
GGTTGTGGGTATCCATGGTTGATTGCATACCAGCATCCAGAATTTGCCTG
CGTGTCGAAATTCGCCATAAAAGCGAGTCTGGAACAGCACTTGGGAGCGA
CAAGACTGCAGCCCGCGGGCTTGCCCCACAGATACTAGGGCCCTTTTCAC
GCCAGAGCCAGAAACTGTACCGAAAGCTGACGACGCTGCACCTGCTGTGC
CCTTTGCTGCTGCTGACCGATGTCATGCCGCGTTCTCAGTTCTGGGGCAG
CAGCAGCTTTTGCTCTTGCACACACCGGGCAACTACCGTTCTGCTGTTTA
CTGGTACTACTGCTGTTCTGCCCGGCCCAGCCCAGATAGCCAGCTCTCTC
AGCACATGAGTCGGAGCCGCAGCAGCAGCAG back to topCoding sequence (CDS) from alignment at C-linearis_contig10:1059373..1060403+ >mRNA_C-linearis_contig10.475.1 ID=mRNA_C-linearis_contig10.475.1|Name=mRNA_C-linearis_contig10.475.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=564bp|location=Sequence derived from alignment at C-linearis_contig10:1059373..1060403+ (Chordaria linearis ClinC8C monoicous)
CCCACACACAACAGCCCACACACCCTCGTAAACACTTCACAGCAGCAGCA
GCAGCAGGAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATTTCAGCTC
ACGCACACCACGCTTCCTCACACACGTGCGCGACAAGGAAAGCCCACACA
CAACAGCCCACACACCCTCGTAAACACTTCACAGCAGCAGCAGCAGCAGG
AGAAGCAGCAGCAGCAGCAGCAGCAGCAGCCCATTTCAGCTCACGCACAC
CACGCTTCCTCACACACGTGCGCGACAAGGAAAGTTCTGGGGCAGCAGCA
GCTTTTGCTCTTGCACACACCGGGCAACTACCGTTCTGCTGTTTACTGGT
ACTACTGCTGTTCTGCCCGGCCCAGCCCAGATAGCCAGCTCTCTCAGCAC
ATGAGTCGGAGCCGCAGCAGCAGCTTCTGGGGCAGCAGCAGCTTTTGCTC
TTGCACACACCGGGCAACTACCGTTCTGCTGTTTACTGGTACTACTGCTG
TTCTGCCCGGCCCAGCCCAGATAGCCAGCTCTCTCAGCACATGAGTCGGA
GCCGCAGCAGCAGC back to top
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