Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 306 |
| Cds size | 306 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927325.5175936-CDS-C-linearis_contig10:1002136..1002442 | 1622927325.5175936-CDS-C-linearis_contig10:1002136..1002442 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1002137..1002442 + |
| 1690879627.5593848-CDS-C-linearis_contig10:1002136..1002442 | 1690879627.5593848-CDS-C-linearis_contig10:1002136..1002442 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1002137..1002442 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.473.1 >prot_C-linearis_contig10.473.1 ID=prot_C-linearis_contig10.473.1|Name=mRNA_C-linearis_contig10.473.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=102bp
DSTVDTTTTTTEDEEGDEDLEHDRIVESPSSAAVATANVVAGKTEERRAA
KPASVAWTLKDTQRPGYTPTFTPFYFTLVKALTGTATGKGSETGKRKRLD
K* back to topmRNA from alignment at C-linearis_contig10:1002137..1002442+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.473.1 ID=mRNA_C-linearis_contig10.473.1|Name=mRNA_C-linearis_contig10.473.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=306bp|location=Sequence derived from alignment at C-linearis_contig10:1002137..1002442+ (Chordaria linearis ClinC8C monoicous)
GACAGCACCGTGGACACCACCACCACCACCACCGAGGATGAGGAGGGGGA
TGAGGACTTGGAGCACGACAGAATTGTAGAGTCGCCGTCGTCGGCGGCTG
TTGCGACTGCCAATGTTGTTGCGGGAAAAACCGAGGAGCGGCGTGCTGCG
AAGCCGGCGAGCGTTGCCTGGACTCTGAAGGATACCCAACGCCCAGGGTA
CACCCCGACATTCACCCCGTTCTATTTCACGTTGGTCAAGGCCTTGACCG
GCACCGCCACCGGCAAGGGAAGCGAAACTGGCAAGCGGAAGCGGCTCGAC
AAGTAG back to topCoding sequence (CDS) from alignment at C-linearis_contig10:1002137..1002442+ >mRNA_C-linearis_contig10.473.1 ID=mRNA_C-linearis_contig10.473.1|Name=mRNA_C-linearis_contig10.473.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at C-linearis_contig10:1002137..1002442+ (Chordaria linearis ClinC8C monoicous)
GACAGCACCGTGGACACCACCACCACCACCACCGAGGATGAGGAGGGGGA
TGAGGACTTGGAGCACGACAGAATTGTAGAGTCGCCGTCGTCGGCGGCTG
TTGCGACTGCCAATGTTGTTGCGGGAAAAACCGAGGAGCGGCGTGCTGCG
AAGCCGGCGAGCGTTGCCTGGACTCTGAAGGATACCCAACGCCCAGGGTA
CACCCCGACATTCACCCCGTTCTATTTCACGTTGGTCAAGGCCTTGACCG
GCACCGCCACCGGCAAGGGAAGCGAAACTGGCAAGCGGAAGCGGCTCGAC
AAGTAGGACAGCACCGTGGACACCACCACCACCACCACCGAGGATGAGGA
GGGGGATGAGGACTTGGAGCACGACAGAATTGTAGAGTCGCCGTCGTCGG
CGGCTGTTGCGACTGCCAATGTTGTTGCGGGAAAAACCGAGGAGCGGCGT
GCTGCGAAGCCGGCGAGCGTTGCCTGGACTCTGAAGGATACCCAACGCCC
AGGGTACACCCCGACATTCACCCCGTTCTATTTCACGTTGGTCAAGGCCT
TGACCGGCACCGCCACCGGCAAGGGAAGCGAAACTGGCAAGCGGAAGCGG
CTCGACAAGTAG back to top
|