mRNA_C-linearis_contig10.461.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_C-linearis_contig10.461.1 vs. uniprot
Match: D7G019_ECTSI (Similar to importin 11 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G019_ECTSI) HSP 1 Score: 1648 bits (4267), Expect = 0.000e+0 Identity = 894/1164 (76.80%), Postives = 964/1164 (82.82%), Query Frame = 3 Query: 84 MELPAALSTDDPSHAQTIFLAIEASTQSPLEGVRKPAELLLKACEELPGYTSVLSSIATTHAAPTDARATAVILLKNMVRVRWKSRGERGAVVDEAEKAALRELLSGGVAMEEPEARVASQLAVLMGKVARADWPRQXXXXXXXXXXXXVSGSPDRTRMALCGANEVLRELSTKRIGLDKAAFVKTSADLLPVLCQAWDAQWASIEGLLVAVAAGIVPS-GDSEAGVKAAEAISLGTVCVKIIRRLLQFGIPGLEHPTVEPLFSGLLQRMQAAATALSRHQEAAAKARQGASGALVEGGGKGYLQGEGPVLSELQELAERMACTAVDAQKDHPIGFRSRYLSAYLSFFCEQLSAIARARSASMSNTTAAEAAGVPRAAGGRGGLWRDAPETFGGVVDPQSIGPFCIQCMSFVANVVSCSSYREDVLQKAIATXXXXXXXXXXXXXATGIRPAAVGRGRIITGKGDAVITPGIALEISSAMGDFFTKARVLALLGLLLEGYLPLTADEVEDWTHQPEEYYLLQDSIEARESVRVSAQQVYMALLEASSNNVGGVLAEAVAKMLSQGVPEQIETCRQSTISPQVLACDALYLCTGLGAYTVKKHFDFSEWFGAFLGPALEALVSTMQTSARGNPAIVASRSPLILLRRLMWLLGCWAEQIPASLRPALVQATANVMKAKEADVVIRLSALGALRSLLALWDLDADQCLAPPLGWLVSALYGMFEDVAEMENRQEASLVLTVMSELLSRSGRLLVPHCQVAVAGLPAVWDATSSQTPLRCKCLQVMTHVVDALGSDKGPDLDRIALAMVDVATKVGSDEAIYLMETGLELWLALLRHSKDYVEGIHNLFPRIPQMLDTDLDNLKQAMLILEAHVVVGGTVFLQAHGPLLCTCFCRVVGQVKPKGAAFVSRALETVLRKFPVEASTMLADGGVLKQVAEACLVGVSDGSDSSREPDLVIVQHLTVLCSRVLLAAPDILRGVLQHLADSYPPTRTPGAGGNTGSASDGGGSPSSNPDWLLAELIGQMTGLFDSAGYSAAGVWRRRLWAMALLKLLPSANSGVIKNLDQIVNICVDVLTEEREDGGKRLKEGLEQLSSEEPEESNAPSPPSLLQARLQETLRADVAVTADLGLLVRGSMDALRATLGEQGWQAAVETVEPVVLRELQGMV 3572
MELP ALS D+P HAQTI+ AIEASTQSP+ VRKPAE LLKACEELPGYTSVL++IATTHAAPTDARATAVILLKNMVRVRW+SRG RGAVV + EKAALRE+L+G MEEPE RV SQLAVLMGK+AR DWP Q +SGSP R RM+LCG NEVL+ELS KRIG DKA+F+KTSADLLPVLCQAWD+QWA IEGLL VAAG VP G S+ A EA+ LGTVC+KIIRRLLQFGIPGL+HP++E LFSGLL RMQ+ AL +HQ AKAR AL G G GE L ELQELAERMACTAVDAQKDHPIGFR RYLSAYLSFFCEQLSA+AR R+ S AGV AGG GLWR+APETFGGVVDPQSIGPFCIQCMSFVANVV CSSYRE+VLQKAIA T RP A GRIITGKGDA+IT IA EISS M DFFTK RV ALLGLLLEGYLPLT E+ DW QPE+Y+LLQDS+EARESVRVSAQQVYMALLEAS NNVGGVLA AVA MLSQGV EQIETCRQ+TISPQVLACDALYLC GLGAYTVK+HFDF WF AFLGPALEALV+TMQ A PA+ S P++LLRRLMWLLGCWAEQIPASLRPALVQATANVMKA EAD+VIRLSAL ALRSLL+LWDLD +QCLAP LGWLV ALY MF+DV EM+NRQE VLTVMSE+L RSGRLLVPHCQ AVAGLP VW ATSSQTPLRC CLQVMTHVVDALG DKGPDLDRIALAMVDV+TKVGSDEAIYLMETGL LWLALLRH+ DY EG+HNLFPRIP+MLDTDLDNLKQ+MLILEAHVV+GGTVFLQAHGPL+CTCFCRVVGQVKPKGAAFVSRAL +VLRKFPVEAS ML DGGV++QVAEACLVGV+DGSDSSREPDLVIVQH+TVLC RVLL AP LRG LQHLADS+P R+ G G ASD +P++NPDWLLAEL+GQMT LFDSAGYS AGVWRRRLWAMALLKLLPSANSGVIKNLDQIVNICVDVLTEEREDGGKRLKE L Q EP+ ++A S P+LL +RL E L+ADVAVT DL LVR SMDALRATLG+QGWQ AVETVEPVVLRELQ MV
Sbjct: 1 MELPDALSPDNPGHAQTIYQAIEASTQSPVPEVRKPAEQLLKACEELPGYTSVLAAIATTHAAPTDARATAVILLKNMVRVRWRSRGGRGAVVGDGEKAALREVLAGA-GMEEPEERVVSQLAVLMGKIARVDWPGQWPQLFPNLVASLLSGSPRRQRMSLCGTNEVLKELSMKRIGFDKASFIKTSADLLPVLCQAWDSQWAIIEGLLPLVAAGNVPDPGGSDGATAAVEAVPLGTVCIKIIRRLLQFGIPGLDHPSIELLFSGLLHRMQSVVAALEQHQ---AKARA----ALSPNVGGGKEDGEAAFLGELQELAERMACTAVDAQKDHPIGFR-RYLSAYLSFFCEQLSAMARVRATCPSKGVGGTGAGVGAVAGG--GLWREAPETFGGVVDPQSIGPFCIQCMSFVANVVCCSSYREEVLQKAIAAATVAPGGVAP---VTARRPGA---GRIITGKGDAIITADIAREISSVMTDFFTKERVEALLGLLLEGYLPLTPVELGDWEDQPEDYFLLQDSMEARESVRVSAQQVYMALLEASGNNVGGVLAAAVANMLSQGVQEQIETCRQTTISPQVLACDALYLCAGLGAYTVKQHFDFQAWFQAFLGPALEALVATMQARALQAPAVSDSCGPMVLLRRLMWLLGCWAEQIPASLRPALVQATANVMKATEADMVIRLSALSALRSLLSLWDLDPEQCLAPALGWLVPALYAMFKDVREMDNRQE---VLTVMSEMLERSGRLLVPHCQAAVAGLPDVWSATSSQTPLRCSCLQVMTHVVDALGRDKGPDLDRIALAMVDVSTKVGSDEAIYLMETGLGLWLALLRHATDYSEGLHNLFPRIPEMLDTDLDNLKQSMLILEAHVVIGGTVFLQAHGPLVCTCFCRVVGQVKPKGAAFVSRALNSVLRKFPVEASRMLDDGGVIRQVAEACLVGVNDGSDSSREPDLVIVQHITVLC-RVLLGAPATLRGALQHLADSHP-ARSGGPNSTNGGASDA--NPTANPDWLLAELVGQMTALFDSAGYSEAGVWRRRLWAMALLKLLPSANSGVIKNLDQIVNICVDVLTEEREDGGKRLKESLAQPPVGEPDSASA-SEPNLLHSRLLEALQADVAVTTDLKGLVRASMDALRATLGDQGWQVAVETVEPVVLRELQRMV 1139
BLAST of mRNA_C-linearis_contig10.461.1 vs. uniprot
Match: A0A6H5L766_9PHAE (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L766_9PHAE) HSP 1 Score: 546 bits (1408), Expect = 3.370e-178 Identity = 315/428 (73.60%), Postives = 346/428 (80.84%), Query Frame = 3 Query: 84 MELPAALSTDDPSHAQTIFLAIEASTQSPLEGVRKPAELLLKACEELPGYTSVLSSIATTHAAPTDARATAVILLKNMVRVRWKSRGERGAVVDEAEKAALRELLSGGVAMEEPEARVASQLAVLMGKVARADWPRQXXXXXXXXXXXXVSGSPDRTRMALCGANEVLRELSTKRIGLDKAAFVKTSADLLPVLCQAWDAQWASIEGLLVAVAAGIVP-SGDSEAGVKAAEAISLGTVCVKIIRRLLQFGIPGLEHPTVEPLFSGLLQRMQAAATALSRHQEAAAKARQGASGALVEGGGKGYLQGEGPVLSELQELAERMACTAVDAQKDHPIGFRSRYLSAYLSFFCEQLSAIARARSASMSNTTAAEAAGVPRAAGGRGGLWRDAPETFGGVVDPQSIGPFCIQCMSFVANVVSCSSYREDVLQK 1364
MELP ALS D+P H QTI+ AIEASTQSP+ VRKPAE LLKACEELPGYTSVL++IATTHAAPTDARATAVILLKNMVRVRW+SRG RGAVV + EKAALRE+L+G MEEPE RV SQLAVLMGK+AR DWP Q XXXXXXX VSG P R RM+LCG NEVL+ELS KRIG DKA+F+KTS DLLPVLCQAWD+QWA IEGLL +VAAG VP G S+ A EA+SLGTVC+KIIRRLLQFGIPGL+HP++E LFSGLL RMQ+ AL +HQ AKAR + L GGGK + E L ELQELAERMACTAVDAQKDHPIGFR RYLSAYLSFFCEQLSA+ R+R S + AGV AGG GLWR+APETFGGVVDPQSIGPFCIQCMSFVANVVSCSSYRE+VLQK
Sbjct: 1 MELPDALSPDNPGHTQTIYQAIEASTQSPVPEVRKPAEQLLKACEELPGYTSVLAAIATTHAAPTDARATAVILLKNMVRVRWRSRGGRGAVVGDREKAALREVLAGA-GMEEPEERVVSQLAVLMGKIARVDWPGQWXXXXXXXVASLVSGIPRRQRMSLCGTNEVLKELSMKRIGFDKASFIKTSVDLLPVLCQAWDSQWAIIEGLLPSVAAGNVPVPGGSDGATAAVEAVSLGTVCIKIIRRLLQFGIPGLDHPSIELLFSGLLHRMQSVVAALEQHQ---AKARAALNPNL--GGGKE--EREAVFLGELQELAERMACTAVDAQKDHPIGFR-RYLSAYLSFFCEQLSAMVRSRVTCPSKGVGGKGAGVGAVAGG--GLWREAPETFGGVVDPQSIGPFCIQCMSFVANVVSCSSYREEVLQK 417
BLAST of mRNA_C-linearis_contig10.461.1 vs. uniprot
Match: A0A6H5L8L7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8L7_9PHAE) HSP 1 Score: 315 bits (808), Expect = 1.000e-95 Identity = 158/187 (84.49%), Postives = 168/187 (89.84%), Query Frame = 3 Query: 2106 AKEADVVIRLSALGALRSLLALWDLDADQCLAPPLGWLVSALYGMFEDVAEMENRQEASLVLTVMSELLSRSGRLLVPHCQVAVAGLPAVWDATSSQTPLRCKCLQVMTHVVDALGSDKGPDLDRIALAMVDVATKVGSDEAIYLMETGLELWLALLRHSKDYVEGIHNLFPRIPQMLDTDLDNLKQ 2666
A EAD+VIRLSAL ALRSLL+LWDLD +QCLAP LGWLV ALY MF+DV EM+NRQE VLTVMSE+L RSGRLLVPHCQ AVAGLP VW ATSSQTPLRC CLQVMTHVVDALG DKGPDLDRIALAMVDV+TKVGSDEAIYLMETGL LWLALLRH+ DY EG+HNLFPRIP+MLDTDLDNLKQ
Sbjct: 2 ATEADMVIRLSALSALRSLLSLWDLDPEQCLAPALGWLVPALYAMFKDVREMDNRQE---VLTVMSEMLERSGRLLVPHCQAAVAGLPDVWSATSSQTPLRCSCLQVMTHVVDALGRDKGPDLDRIALAMVDVSTKVGSDEAIYLMETGLGLWLALLRHATDYSEGLHNLFPRIPEMLDTDLDNLKQ 185
BLAST of mRNA_C-linearis_contig10.461.1 vs. uniprot
Match: A0A835Z4X2_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X2_9STRA) HSP 1 Score: 291 bits (744), Expect = 2.100e-79 Identity = 213/681 (31.28%), Postives = 326/681 (47.87%), Query Frame = 3 Query: 1290 FCIQCMSFVANVVSCSSYREDVLQKAIATXXXXXXXXXXXXXATGIRPAAVGRGRIITGKGDAVITPGIALEISSAMGDFFTKARVLALLGLLLEGYLPLTADEVEDWTHQPEEYYLLQDSIEARESVRVSAQQVYMALLEASSNNVGGVLAEAVAKMLSQGVPEQIET-CRQSTISPQVLACDALYLCTGLGAYTVKKHFDFSEWFGAFLGPALEALVSTMQTSARGNPAIVASRSPLILLRRLMWLLGCWAEQIPASLRPALVQATANVMK--AKEADVVIRLSALGALRSLLALWDLDADQCLAPPLGWLVSALYGMFEDVAEMENRQEASLVLTVMSELLSRSGRLLVPHCQVAVAGLPAVWDATSSQTPLRCKCLQVMTHVVDALGSDKGPD--LDRIALAMVDVATKVGSDEA-IYLMETGLELWLALLRHSKDYVEGIHNLFPRIPQMLDTDLDNLKQAMLILEAHVVVGGTVFLQAHGPLLCTCFCRVVGQVKPKGAAFVSRALETVLRKFPVEASTMLADGGVLKQVAEACLVGV--SDGSDSSREPDLVIVQHLTVLCSRVLLAAPDILRGVLQHLADSYPPTRTPGAGGNTGSASDGGGSPSSNPDWLLAELIGQMTGLFDSAGYSAAGVWRRRLWAMALLKLLPSANSGVIKNL-DQIVNICVDVLTEE 3305
F IQ + F++NVV CSSYR D LQ A+A G + G GD+ I A I A+ F+T AR+ L + LPL+ +++ W+ PE + L QDS++ ES+RV+ + +++ ++E+ + G + V ML+ P+Q+E S I+ V DALYL GL ++ W LGP +++ A+ +P +LLRR +W +GC A + A + + A V+ A + D ++L+AL L ++ W D + L P LG L+ L+ + + E+E RQ+ L + E++S + L+P + +P VW A QTPLR CL +M +V A+G+ G L + + M+ +A V + +A Y++ G+ELWL R Y +H LF + +L+ D++ +K ML+LEA+ ++G L A+ + QVKP GA FV+RALE +L P E + +L V E LV V S +SS EPD+VIVQH+TVL + VLLAAPD+ +L+ + + +L M LFD+ G RRR W +ALL LP ++ L DQ+VNICV L +E
Sbjct: 157 FAIQSVVFLSNVVGCSSYRADTLQSAVAK---------------GKMAGSAG--------GDSPINAETATAIRQALDAFWTPARISQLCEWTIRHLLPLSPSDLQYWSDDPEAFVLEQDSLDVTESLRVAGEHLFLGMVESPDH--GRQVVGIVEDMLTASAPQQLEAFATTSGITDTVFLVDALYLAVGLATMSLSGDM-LRIWVQEVLGPGTRRMLA-------------ATTAPPLLLRRALWAVGCVANHLTAPIAADVASLVAAVLGGGAAQGDAAVQLAALSTLHGIVEQWVYDPSEALVPALGPLLDGLFSVLGRMRELEPRQQVLDALVAVIEIVSTA---LLPFANKLLEVMPLVWSAAEEQTPLRITCLTLMAQIVLAVGTTPGAAQALAPVVVPMIALACHVDARDADAYMITGGMELWLQYTRRCPAYTAELHALFLLLAGVLERDMECVKTGMLLLEAYALLGQQAMLSAYAEHVVRSLQTCAAQVKPDGAQFVTRALEAILNVAPREGAALLLP------VLERLLVSVLASARGESSCEPDIVIVQHVTVL-AHVLLAAPDVCAELLRRCSVG------------------------------VVDLAHVMVHLFDAVGGGTPH--RRRSWCLALLACLPQLRPEQVQELMDQVVNICVSALNDE 756
BLAST of mRNA_C-linearis_contig10.461.1 vs. uniprot
Match: A0A7R9TMU8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TMU8_9VIRI) HSP 1 Score: 254 bits (649), Expect = 8.580e-66 Identity = 314/1148 (27.35%), Postives = 493/1148 (42.94%), Query Frame = 3 Query: 153 ASTQSPLEGVRKPAELLLKACEELPGYTSVLSSIATTHAAPTDA-RATAVILLKNMVRVRWKSR-GERGAV-VDEAEKAALRELLSGGVAMEEPEARVASQLAVLMGKVARADWPRQXXXXXXXXXXXXVSGS--PDR--TRMALCGANEVLRELSTKRIGLDKAAFVKTSADLLPVLCQAWDAQWA-SIEGLLVAVAAGIVPSGDSEAGVKAAEAISLGTVCVKIIRRLLQFGIPGLEHPTVE--PLFSGLLQRMQAAATALSRHQEAAAKARQGASGALVEGGGKGYLQGEGPVLSELQELAERMACTAVDAQKDHPIGFRSRYLSAYLSFFCEQLSAIARARSASMSNTTAAEAAGVPRAAGGRGGLWRDAPETFGGVVDPQSIGPFCIQCMSFVANVVSCSSYREDVLQKAIATXXXXXXXXXXXXXATGIRPAAVGRGRIITGKGDAVITPGIALEISSAMG-DFFTKARVLALLGLLLEGYLPLTADEVEDWTHQPEEYYLLQDSIEARESVRVSAQQVYMALLE----ASSNNVGGVLAEAVAKM-LSQGVPEQIETCRQSTISPQVLACDALYLCTGLGAYTVKKHFDFSEWFGAFLGPALEALVSTMQTSARGNPAIVAS-RSPLILLRRLMWLLGCWAEQIPASLRPALVQATANVMKAKEADVVIRLSALGALRSLLALWDLDADQCLAPPLGWLVSALYGMFEDVAEMENRQEASLVLTVMSELLSRSGRLLVPHCQVAVAGLPAVWDATSSQTPLRCKCLQVMTHVVDALGSDKGPDLDRIALAMVDVATKVGSDEAIYLMETGLELWLALLRHSKDYVEGIHNLFPRIPQMLDT-DLDNLKQAMLILEAHVVVGGTVFLQAHGPLLCTCFCRVVGQVKPKGAAFVSRALETVLRKFPVEASTMLADGGVLKQVAEACLVGVSDGSDSSREPDLVIVQHLTVLCSRVLLAAPDILRGVLQHLADSYPPTRTPGAGGNTGSASDGGGSPSSNPDWLLAELIGQMTGLFDSAGYSAAGVWRRRLWAMALLKLLPSANSGV-IKNLDQIVNICVDVLTEEREDGGKRLKEG------LEQLSSEEPEESNAPSPPSLLQARLQETLRADVAVTADLGLLVRGSMDALRATLGEQGWQA 3521
A+ QS VR PAE L+A PGY L + A DA R AV+ LKN + W+ R G GAV V AEKA++R L A++EP +VA QLAV++ +VAR D+PR+ S PD + + VL+EL++KR+ D+ F + +A L + W A + + EG+ A+ A G + A A+ + +K +RRL+ G G + T++ PL L+ A + ++AA+ +GA V P+ +++ A + T VD Q HP F L + A + AA G PR I CM+ + NV+ YR+ + A RG +T G V E+ +G D + VL L+ GYLPLTA+++E+W PE + QD + +++ +R A+ ++ +LE A + V +L EAV +M + E R S LA +A+Y GLG Y++ + DF F L P L AI A+ R+P+ RR WL+G W + A +R A +++ D +RL+ALGAL +L W + ++ P L ++ A + + E++ + ++ V+ E + S VA LP W A+ SQ LR + + V+ +V +LG GP L + +V T EA+ L+E GL+LWLA+LR++ + LFP IP+++ + ++L+ +LEA+V++GG FLQ HG + T +VG+VK G V +++ +L FP +A +L +G + K VA +++ ++S R V + +RVL A +L + R A AS GG L+ G++ A S V +R+L ++AL LL SA+ V + NL+ I+ + L E DGG G ++ + E+ +A + RL+ AD A ADL +R ++ A AT G QA
Sbjct: 17 AAAQSADAAVRAPAEGALQAAAAQPGYCEALLRVVAARRAGGDAERWMAVLCLKNAIGRHWRVRAGANGAVSVTAAEKASVRSALLA--ALDEPSPQVAVQLAVVVARVARLDFPREWPGFFQALMGRLQQPSAVPDGLLVQRVYLTLHHVLKELASKRLAADQRVFAEVAAQLFEGVWAQWCADTSVAFEGVPAALDA--AARGSAGADQPLLLALERWLLALKCLRRLVLHGF-GPDARTLDDVPLVRRLVPACMEALGRMRSWRDAAS------AGAAV------------PLAPAIEKCALKALKTVVDLQHTHPWSF---------------LGCLGTTFDACAAEVLAAPEGGRPR------------------------FDRLLIHCMTLLQNVLKNRGYRKALADSAAPNELTQ-------------------RGERLTALGKEV-----RAELQVRVGADAMARLCVL-----LVRGYLPLTAEDLEEWEADPEAFAHEQDVVGSKDRLRPCAESLFATVLETAREACAPGVVAMLNEAVVEMGAAAPAAESTGAARARAAS---LALEAVYNAVGLGEYSLYDYVDFKSLFPNVLVPEL---------------AIDAAWRAPV--RRRAAWLIGRWVSALDAPMRQVAYGALTPLLRVD--DFAVRLAALGALHALCDDWSFE-EEGFVPYLAPVLDACFALCPQSTELDTQTRVFALVGVLVERMPNSAAAAADR---VVAQLPGAWAASESQPLLRIQVVSVVQRMVASLGLQGGP-LQAMIAPVVAYCTNPDEREALSLLEDGLQLWLAVLRNAPTMSPELMALFPNIPRIIASMGFEHLQPCARLLEAYVLLGGAEFLQTHGGSVVTFLGAIVGEVKEAGLLMVLPSMDMMLMLFPADAPALL-EGVLAKLVAL-----LAERTESMRA-----VAEACCVLARVLFANARAFERLLSPTGPAAALLRPTVA---ASVASTGG-------------LMRTFVGVWLEACDSLRSVHQRKLCSLALCVLLTSADPAVAVANLEPIIVVATGALAEL--DGGAASGSGGVLGQQWQRGCDGDDEDEDAGEGGA---QRLRAAHAADQAAQADLRAALRDALRAAEATHGAAFAQA 1014
BLAST of mRNA_C-linearis_contig10.461.1 vs. uniprot
Match: A0A7S2WRP2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRP2_9STRA) HSP 1 Score: 234 bits (598), Expect = 3.040e-63 Identity = 161/525 (30.67%), Postives = 273/525 (52.00%), Query Frame = 3 Query: 2013 RRLMWLLGCWAEQIPASLRPALVQATANVM----KAKEADVVIRLSALGALRSLLALWDLDADQCLAPPLGWLVSALYGMFEDVAEMENRQEASLVLTVMSELLSRSGRLLVPHCQVAVAGLPAVWDATSSQTPLRCKCLQVMTHVVDALGSDKGPDLDRIALAMVDVATKVGSDEAIYLMETGLELWLALLRHSKDYVEGIHNLFPRIPQMLDTDLDNLKQAMLILEAHVVVGGTVFLQAHGPLLCTCFCRVVGQVKPKGAAFVSRALETVLRKFPVEASTMLADGGVLKQVAEACLVGVSDGSDSSREPDLVIVQHLTVLCSRVLLAAPDILRGVLQHLADSYPPTRTPGAGGNTGSASDGGGSPSSNPDWLLA---ELIGQMTGLFDSAG-YSAAGVWRRRLWAMALLKLLPSANSGVIKNLDQIVNICVDVLTEEREDGGKRLKEGLEQLSSEEPEESNAPSPPSLLQARLQETLRADVAVTADLGLLVRGSMDALRATLGEQGWQAAVETVEPVVLRELQ 3563
RR++WL+G W ++ +RP L + ++ E + + L+ L L+ W A A G V+ LY + ++ E+R + ++ ++ E + +G ++PH + + LP +W++T+ Q LR L + T VV +LGS + L L M+ +AT + YL+E GLELWL++++ + Y E +HNLFP + +ML+ D++ +KQAM + EA++ +GG FL+ H + F VG+VKPK FV++A+ET+LR+FP + + ML +GG+L ++ E CL +++S + + HL VL +RV+ AP+ ++ L S PP SDG + D +L +L+ G FD+ G S+AG W R+L +AL+ L+P A+ G+ LDQ+++ C+DVL+E GG L S + P P + +++D +T +L + M A +G + +Q A+ V+P +L +LQ
Sbjct: 1 RRIIWLIGPWLHELNEEVRPQLYTSLVALLFDSRLCSEQEKAVVLTLQSTLHGLVDNWSF-APAAFASVTGDAVNGLYRVCFILSNFESRLQILSLIHLILERVGSAG--ILPHVESIMQPLPQIWESTADQNLLRKSVLNITTLVVSSLGS-QASHLFGFVLPMLSLATDPTRPDTEYLLEDGLELWLSVMQQTPSYTEPLHNLFPHVQRMLERDMEFVKQAMALTEAYIAMGGAQFLETHVQAVVQAFSLTVGEVKPKAVVFVTQAIETLLRRFPADGAAMLREGGILGKLLEPCL-----STEASAANGMTL--HLAVL-ARVMFTAPEQMQAFL-----SAPPI------------SDG------SADQVLGRVLQLVDLWLGNFDTLGAISSAGSWHRKLVTLALVSLMP-ASPGMFSRLDQVLDKCIDVLSEIETSGGDAAFTLLG--SPVRAKAPGVPDAPDFYTQCQRGMVQSDPVLTTNLRGFLEQKMAEAEAAVGSENFQQAMAAVDPALLAQLQ 487
BLAST of mRNA_C-linearis_contig10.461.1 vs. uniprot
Match: A0A7S4RPQ8_9STRA (Hypothetical protein n=8 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RPQ8_9STRA) HSP 1 Score: 244 bits (623), Expect = 4.010e-62 Identity = 275/1033 (26.62%), Postives = 473/1033 (45.79%), Query Frame = 3 Query: 582 VLRELSTKRIGLDKAAFVKTSADLLPVLC-QAWDAQWASIEGLLVAVAAGIVPSGDSEAGVKAAEAISLGTVCVKIIRRLLQFGIPGL--------EHPTVEPLFSGLLQRMQAAATALSRHQEAAAKARQGASGALVEGGGKGYLQGEGPVLSELQELAERMACTAVDAQKDHPIGFRSRYLSAYLSFFCEQLSAIARARSASMS-NTTAAEAAGVPRAAGGRGGLWRDAPETFGGVVDPQSIGPFCIQC-MSFVANVVSCSSYREDV-LQKAIATXXXXXXXXXXXXXATGIRPAAVGRGRIITGKGDAVITPGIALE--ISSAMGDFFTKARVLALLGLLLEGYLPLTADEVEDWTHQPEEYYLLQDSIEARESVRVSAQQVYMALLEASSNNVGGVLAEAVAKML----SQGVPEQIETCRQSTISPQ--VLACDALYLCTGLGAYTVKK--HFDFSEWFGAFLGPALEALVSTMQTSARGNPAIVASRSPLILLRRLMWLLGCWAEQIPASLRPALVQATANVMKAKEA---DVVIRLSALGALRSLLAL-WDLDADQCLAPPLGWLVSALYGMFEDVAEMENRQEASLVLTVMSELLSRSGRLL-VPHCQVAVAGLPAVWD-ATSSQTPLRCKCLQVMTHVVDALGSDKGPDLDRIALAMVDVATKVG-SDEAIYLMETGLELWLALLRHSKDYVEGIHNLFPRIPQMLDTDLDNLKQAMLILEAHVVVGGTVFLQAHGPLLCTCFCRVVGQVKPKGAAFVSRALETVLRKFPVEASTMLADGGVLKQVAEACLVGVSDGSDSSREPDLVIVQHLTVLCSRVLLAAPDILRGVLQHLADSYPPTRTPGAGGNTGSASDGGGSPSSNPDWLLAELIGQMTGLFDSAGYSAAGVWRRRLWAMALLKLLPSANSGVIKN------LDQIVNICVDVLTEEREDGGKRLKE-GLEQLSSEEPEESNAPSPPSLLQARLQETLRADVAVTADLGLLVRGSMDALRATLGEQGWQAAVETVEPVVLRELQGMV 3572
+L EL +KR+ +DK K S + + +L + W + I + A + + PS + + I + KI+ L +P L V+ +++ +L+ A AL R E R G++ V G + + + +L L + + V+ Q HP+ SR++ +L F L RA S+ ++ N +E A P A APE F + C M F+AN+VSCS Y D +AIA ++ G R+IT +GD +I +A++ + + DFFT+ R+ L + ++ ++ L+A+ +++W PE + + + + + AQ +Y++L+E+ + ++A V ML SQ +IE + + VL +++Y GL + + F+ WF L P L +++ R ++ +L RL+WL+ C A I + + AL Q +++ + + DV +RL A+ AL S+L + +DL + L ++S+LY + D E+ R ++ ++++ + SGR + AV LPA+W+ AT LR L +++ V A+G + L I L M++ + D + L+E L LWL LLR + Y +LF R+ +L+ DL++LK MLI E ++++GG FL AH L VVGQ KP+GAA+ + E +LR FPVE T+L GG+++ + +C + + +S+ EP+ VIV +LT + +R LL P +L ++ P T T S+ G + S P ELI +F ++ G ++LW + +L LLP S + + +DQ++ IC+ VL + + G + EE + +A L + D+ TAD+ + M L +TLG +Q + TVEPV+L++L+ +V
Sbjct: 244 ILSELCSKRLLVDKKYIAKISHESVGILVGEGWMMAMSYIGAYITASSTEVQPSSSPQ---RTLCVIKYALLLSKILSHLFHSALPTLLTEDGSTPSSAIVDQVYTAILE----AVPALLRFLEE----RIGSNDKDV--GRNAPVHDKEAIAGDLDTLLDVLGSLVVEVQHAHPLPC-SRFVGPFLDMFYSNLM---RAVSSQIAVNGQVSEVA--PTAL--------TAPECF-------------LMCAMRFLANIVSCSHYMPDEEANEAIAAMRSETI-------------SSSGDRRVITSRGDTIIDR-VAIQTIVQTVWFDFFTEDRLRQLADVSIKHFMILSAERLDEWEADPESFVITESQRNVDDDLAACAQNLYLSLVESKAGKP--IIAPLVVTMLGDIGSQLNAAKIEAGEVTADAGNRNVLLWNSIYTAAGLSVNVLIECEGFEIDTWFEKTLVPCLASILQ-----GRNKVNVLP-----VLRHRLVWLICCIAHCI-SDTKTAL-QVLISIINNEPSSLNDVAVRLGAVEALTSILNVHYDLIDE--FYHLLEIIISSLYRLVNDCTEINTRAQSLSCISLLLFHVVASGRKVDYATANAAVQPLPALWEVATDQNILLRRDVLSILSGVGLAVGRTQVGHLYPIVLPMINSSLDPSCQDRDVCLVEDVLALWLNLLRLATSYELHWESLFSRVKDILEQDLEHLKILMLITEGYILLGGASFLNAHYSTLQNILILVVGQTKPRGAAYTALVFEALLRTFPVEGGTLLLQGGIMRTMLSSCALNYQN--NSACEPERVIVLYLTAI-ARSLLGNPALLD-------ETLPITST----------SNEGVTLSYGP----RELIHMYIVMFKGIESNSNGALHKKLWLLLMLSLLPPTPSPTVYSTHLLQMMDQLLEICLSVLAHQPASSNPEPYDVGFDS------EEETIETGKDAYRAMLDVEAKKDITNTADVQSAFQLKMAGLASTLGNDVYQLILSTVEPVILQQLERIV 1176
BLAST of mRNA_C-linearis_contig10.461.1 vs. uniprot
Match: A0A6H5L7G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G0_9PHAE) HSP 1 Score: 214 bits (546), Expect = 8.000e-61 Identity = 117/143 (81.82%), Postives = 124/143 (86.71%), Query Frame = 3 Query: 3144 MTGLFDSAGYSAAGVWRRRLWAMALLKLLPSANSGVIKNLDQIVNICVDVLTEEREDGGKRLKEGLEQLSSEEPEESNAPSPPSLLQARLQETLRADVAVTADLGLLVRGSMDALRATLGEQGWQAAVETVEPVVLRELQGMV 3572
MT LFDSAGYS AGVWRRRLWAMALLKLLPSANSGVIKNLDQIVNICVDVLTEEREDGGKRLKE L Q EP+ ++A S P+LLQ+RL E L+ADVAVT DL LVR SMDALRATLG+QGWQ AVETVEPVVLRELQ MV
Sbjct: 1 MTALFDSAGYSEAGVWRRRLWAMALLKLLPSANSGVIKNLDQIVNICVDVLTEEREDGGKRLKESLAQPPVGEPDSASA-SEPNLLQSRLLEALQADVAVTTDLKGLVRASMDALRATLGDQGWQVAVETVEPVVLRELQRMV 142
BLAST of mRNA_C-linearis_contig10.461.1 vs. uniprot
Match: A0A2D4CE50_PYTIN (Importin N-terminal domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CE50_PYTIN) HSP 1 Score: 227 bits (578), Expect = 6.220e-57 Identity = 189/703 (26.88%), Postives = 321/703 (45.66%), Query Frame = 3 Query: 1299 QCMSFVANVVSCSSYREDVLQKAIATXXXXXXXXXXXXXATGIRPAAVGRGRIITGKGDAVITPGIALEISSAMGDFFTKARVLALLGLLLEGYLPLTADEVEDWTHQPEEYYLLQDSIEARESVRVSAQQVYMALLEASSNNVGGVLA-------EAVAKMLSQGVPEQIETCRQSTISPQVLACDALYLCTGLGAYTVKKHFDFSEWFGAFLGPALEALVSTMQTSARGNPAIVASRSPLILLRRLMWLLGCWAEQIPASLRPALVQATANVMKAKEADVVIRLSALGALRSLLALWDLDADQCLAPPLGWLVSALYGMFEDVAEMENRQEASLVLTVMSELLSRSGRLLVPHCQVAVAGLPAVWDATS-SQTPLRCKCLQVMTHVVDALGSDKGPD-----LDRIALAMVDVATKVGSDEAIYLMETGLELWLALLRHSKDYVEGIHNLFPRIPQMLDTDLDNLKQAMLILEAHVVVGGTVFLQAHGPLLCTCFCRVVGQVKPKGAAFVSRALETVLRKF--PVEASTMLADG--GVLKQVAEACLVGVSDGSDSSREPDLVIVQHLTVLCSRVLLAAP-------DILRGVLQHLADSYPPTRTPGAGGNTGSASDGGGSPSSNPDWLLAELIGQMTGLFDSAGYSAAGVWRRRLWAMALLKLLPSANSGVIKNLDQIVNICVDVLTEEREDGGKRLKE 3335
+ + F+ANV SC Y+ + L ++IT GD ++ + LE ++A+ FF AR+ AL+ ++ ++ L +++DW PE + L +S+ A ES+RV A+ +++ LLE + ++ VL EA+A++ V + ++ VL DA+ L GLG Y + + FDF WF + L P L A ARG P +L R++WL+ CW Q+ +R L A V A+ +D ++ L L ++L+ W DAD L P L + L F +++ + VL + L++ G + Q A LPA+W +++ +R + LQ++ ++ A+ + L ++L ++ +AT V + + ++LME+GLELWL + + Y + +H LFP Q+LD DL++++ +L+LE +V +GG F Q + + + VVG VK + A ++R LE VL VEA+ L VL++V AC+ D +RE VI +L V+ ++A+ D+L+G L L + WL + ++ + +R+LWA L +L V++ L QI+ CV+V EE E +R +E
Sbjct: 342 EALQFLANVWSCRLYKRESLSTDETRVLT----------------------KVITASGDVALSDAMVLEANAALASFFDGARIAALVERVVLQFMRLQPSDLDDWRDDPEAFVTLSESLTAAESLRVCAENLFLTLLEHARDDTIPVLTRLTATATEALARLRKDSVDDSVDA--------TVLDVDAVLLALGLGCYDLHECFDFEPWFLSHLVPLLVA-------DARGLP---------VLRARVVWLVSCWLAQLSGDVRVPLYDALLCV-SAQSSDAALQRRVLQTLEAMLSDWGFDADAFL-PFLPRAIERLVAFFPQARASDSKLK---VLACLEALVTACGPRVATAAQQLCAPLPAMWQTGGEAESLVRAQILQLLAALLRAVKTSSHSSSELCALHEMSLQVIALATDVRNPDELFLMESGLELWLETVASATQYSDALHALFPNAVQLLDRDLEHVQLVLLLLERYVRLGGAAFWQTYHADVQRLWLGVVGNVKLEAARQLARTLELVLALGGDSVEATQALVASCAPVLQRVVAACVA--FQRRDDARESHGVITAYLGVVARLWVVASGQPRVVVVDVLQGDLATLLEVL-------------------------ELWLHQAF---------TVAPASLRLPQRKLWAAGLCGVLDVPEPPVLEKLGQILEACVEVADEEAEQASERARE 957
BLAST of mRNA_C-linearis_contig10.461.1 vs. uniprot
Match: A0A8K1C546_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C546_PYTOL) HSP 1 Score: 217 bits (552), Expect = 9.840e-54 Identity = 215/875 (24.57%), Postives = 386/875 (44.11%), Query Frame = 3 Query: 1008 VLSELQELAERMACTAVDAQKDHPIGFRSRYLSAYLSFFCEQLSAIARARSASMSNTTAAEAAGVPRAAGGRGGLWRDAPETFGGVVDPQSIGPFCIQCMSFVANVVSCSSYREDVLQKAIATXXXXXXXXXXXXXATGIRPAAVGRGRIITGKGDAVITPGIALEISSAMGDFFT-----KARVLALLGLLLEGYLPLTADEVEDWTHQPEEYYLLQDSIEARESVRVSAQQVYMALLEASSNNVGGVLAEAVAKMLSQGVPE--QIETCRQSTISPQVLACDALYLCTGLGAYTVKKHFDFSEWFGAFLGPALEALVSTMQTSARGNPAIVASRSPLILLRRLMWLLGCWAEQIPASLRPALVQATANVMK--AKEADVVIRLSALGALRSLLALWDLDADQCLAPPLGWLVSALYGMFEDVAEMENRQEASLVLTVMSELLSRSGRLLVPHCQVAVAGLPAVWDATSSQTPLRC-KCLQVMTHVV-DALGSDKG---------PDLDRIALAMVDVATKVGSDEAIYLMETGLELWLALLRHSKDYVEGIHNLFPRIPQMLDTDLDNLKQAMLILEAHVVVGGTVFLQAHGPLLCTCFCRVVGQVKPKGAAFVSRALETVLRKFPVEASTMLADGGVLKQVAEACLVGVSDGSDSSREPDLVIVQHLTVLCSRVLLAAPDILRGVLQHLADSYPPTRTPGAGGNTGSASDGGGSPSSNPDWLLAELIGQMTGLFDSAGYSAAGVWRRRLWAMALLKLLPSANSGVIKNLDQIVNICVDVLTEEREDGGKRLKEGLEQLSSEEPEESNAPSPPSLLQARLQETLRADVAVTA---DLGLLVRGSMDALRATLGEQGWQAAVETVEPVVLRELQ 3563
V++ L ++A RMA V QK +PI FR+ YLS +++ F L + +S++ + VP+ I+ + F ANV+SC Y+ + L + TG + V + +IT GD +T + LE SA+ FF+ ++R+ LL L++ Y+ L ++++W++ E + +L +++ A+ES+R A+ +++ +L+ VL + A S + E Q + +VL DA+ L GLG Y + F+F WF + L P L Q+++ G+ V +L R++WL+ CW Q+ A++R L A N EAD ++L + +L S++ W D L P L V LY F E E++ + VL + ++ G ++ ++ + LPA+W + L K LQ++ ++ +A D L ++L +V AT V + + ++LME+GLELW+ L S Y E +H LF ++++ D +++K M +LE +V +G F Q++ + VVG VK + + ++R +E ++ + ++ ++ ++ Q+ AC +S REP+ VIV +L V+ +LR L+ + N ++ + F + G + + RR++WA+ + L V++ L QI+ C DVL EE E +E + S ++ ES Q + +D V+A DL +V+ + A+ LG + ++T++ VL + Q
Sbjct: 291 VVAVLDKVAFRMASLIVGIQKAYPIEFRA-YLSPFMNLFWNVL--VQPMQSSATDHR-------VPKR--------------------------LQIESLQFFANVLSCRLYKRESLSSEL----------------TGDSSSVVTK--VITATGDVSLTDSMVLEAQSAVDSFFSASMGEESRLEMLLRLVVLHYMKLQPSDLDEWSNDSEAFVILSENLTAQESIRACAENLFLTVLQNFPQQTIPVLTQLTAAA-SSWLAEITQRSDGPSPDVQQRVLESDAVLLAIGLGCYDLHDCFEFEPWFLSNLVPLL-----VNQSASIGSINDVP-----VLKYRVVWLVSCWLAQLTANIRAPLYDALLNASAFFKPEADAALKLRIVQSLESMVNDWGFDRSVFL-PFLPRAVECLYAFFPQTDESESKMK---VLGCLDAIVQACGGDIISFSELISSPLPAMWTSGGEAENLVLGKILQLLAKLLSNAKECDASVAAQHAVALETLKEMSLQVVRFATDVSNPDEVFLMESGLELWVETLEISTVYTENLHVLFQNAIRLMERDYEHIKLVMTLLERYVRLGTEQFWQSYHASVENLLQNVVGNVKAEASIQIARTVELIVAAY--SSAQLVGCRELVTQLVAAC--AAYQRKESGREPENVIVAYLVVIAQ--------LLRRHLELVVVQI----------------------FGNDLATFVAVLDLLVNKFFTVGSVSMSLARRKVWAVGMCAALDVIEQPVLEKLGQIMECCADVLDEEVE----AAQEANKPSSDDDESESGGAYRAYKSHRTKQSSEMSDTVVSATNIDLKAMVQTKLSAIATKLGPDLFGQLLQTIDSSVLTKFQ 1058 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.461.1 >prot_C-linearis_contig10.461.1 ID=prot_C-linearis_contig10.461.1|Name=mRNA_C-linearis_contig10.461.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1169bp MELPAALSTDDPSHAQTIFLAIEASTQSPLEGVRKPAELLLKACEELPGYback to top mRNA from alignment at C-linearis_contig10:901184..916406- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.461.1 ID=mRNA_C-linearis_contig10.461.1|Name=mRNA_C-linearis_contig10.461.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15223bp|location=Sequence derived from alignment at C-linearis_contig10:901184..916406- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:901184..916406- >mRNA_C-linearis_contig10.461.1 ID=mRNA_C-linearis_contig10.461.1|Name=mRNA_C-linearis_contig10.461.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7014bp|location=Sequence derived from alignment at C-linearis_contig10:901184..916406- (Chordaria linearis ClinC8C monoicous)back to top |