mRNA_C-linearis_contig10.460.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.460.1

>prot_C-linearis_contig10.460.1 ID=prot_C-linearis_contig10.460.1|Name=mRNA_C-linearis_contig10.460.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=295bp
VFGRNVTSLHISGTSTLSENSASTAGGAFAAERSSLTMDTQRSEFANNTA
VSGDGGAISLDGRGDIVDDGTTALLIGGTTFFTGNAAKNSSGGALHVQSS
TLTVVGNTTFLFNVAGIDGGAVHTTQCREVGVRGDTLFESNTVPGSGGGF
YGGSCDKVSLEDATFRSNHATWGGAVALVSCGEDATVRGSAATTSACTFD
GNEASDGGGIYSASGFDQISDSTFVNNVAASSGGALAHSSVLLALTGSTF
RNNTAREEGYAVMSLGPLHSMDGLVFDANVQYCGVGTYGYERIEV
back to top

mRNA from alignment at C-linearis_contig10:886026..889056-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.460.1 ID=mRNA_C-linearis_contig10.460.1|Name=mRNA_C-linearis_contig10.460.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3031bp|location=Sequence derived from alignment at C-linearis_contig10:886026..889056- (Chordaria linearis ClinC8C monoicous)
GTTTTCGGACGGAATGTGACCAGCTTGCACATCAGCGGCACATCAACGCT
CTCGGAGAATTCGGCCAGCACCGCCGGAGGTATTATTTTGAGAACCTGTC
GGTTTCATTGGTTCATATGCTCTTATGCTCTTACTTGGTAGGCACACAGG
TCTTCATGTGGGCGGTGCGATGTAAAAATGATAAGGTGTATCCCCTCAAC
TCCTGGTCGCCGAATTCCGCACGTCAGTGCGCGCCTTACGGACGTGGCCG
GCGGCAGAGGGCATGCAACATGCCACAGGCACATAATGCGCACAACGATG
GAGGGGGCTTTTGCAAGCCGTCACCCAATCATCAACTAACCGCGCCTCTG
TCCGATGTATTTATATTAACGCATATTATTGCAGGTGCCGTATACACAGC
TGGGTGTGATACCACTGTCGAGGGCGACGCAAGCTTTGAGTTCAACTCGG
CGGGAACATTTGGAGGTGAGGAGGTTATTTTCATGGGGCTAGTTTGGAAT
AGCATGTCTTTCACCCGACCTGACCGAGCCTGACTGGCCGCTTTCTCTTT
TGCTTCTCTTGTCTCTTTCGCTTCTCTCTCTTTCTCTTTTGTTTCTCCGC
TCTCTCTCAATCTCCATGTGTCGGTTAATCCAGGCGCTTTCGCGGCGGAG
CGGAGTTCCCTGACAATGGATACCCAAAGGAGCGAGTTTGCAAACAACAC
AGCCGTATCGGGAGATGGAGGTAGATCAATCTCATGTGCAAATGTAAATG
TATGTACATAAATACGTAGAGCGTTTTAAATAGTGTTCCGAGTGGCGGGG
TGCTAGAGGAGTACATTCTGCTTTCCCGGAGATTGTATCATAGGCGGGTT
GATCTCTCATCATACAGCCTTATCGCTGCATGCACATCCTTCCAGTCGAG
TAGCCCGCTCCCTTCCACCAGTTTGGGCCGAAACCAATCTGTCTACCCGT
TGCTTGCTTGTGGTTTGTCTCGAGGAAACAGCGTTCCTCATTGTATCGGC
CATAGGCCATTAGTCTCTCCCCGGCGAGGAGGAGGACAGCACTGCGGCAG
TTGAACGCTCCGGGATAAATAACCCGTTGCCATATGTCATGAGCTATGAG
AACCTTGGCCAGTTGCGTTGAATTCCCACGCCCTAAGCCGTAGTTTCTTC
GTCGCTGCCACCCGGTGAAAAGAACCACGAGCTTGTAATATTTCGACACC
ATGACCTGGCCGCAAACAGGTGCGATTTCCTTGGACGGACGCGGGGATAT
CGTCGACGACGGCACCACAGCGTTGCTCATCGGCGGGACTACATTTTTTA
CAGGGAACGCGGCGAAAAACAGCAGCGGGGGTAAGGGATGAACTAAACTG
AACGGCAGGTTTGCATGTTTGCAGGTGGATTGAGCTGTCATGACCTGACT
CGAGCAGGTGGTCGGTGAGAAGCAGTGCAACATTGGGCTCTACGAAGCAC
ATTCCCGCGCTCTCGCCGCGGCTGAATGTCCGGAATGTGCGGAGATCACT
CACGTGTCTTTGCGCACGGGTTACCTCGTGCTGCTGGTCAGATTTGATAC
AGCACGACACCCATGTGGCACGGCGGTGACGCCAACATTTCCCCGCACGT
TGCATTACGTCTTCGCTCGTCAAACAAGGTGCTCTTCACGTGCAAAGTTC
CACCCTCACAGTCGTCGGCAACACGACATTCCTCTTCAACGTCGCAGGGA
TCGACGGAGGTGAGTGAGGCGTGAGGGGCGAGGGGTGAGGCAGGTTGAGG
TCAAACCTATTTCTAAATCATACTCTACAATCTAATCCTTCTTTTCCGTA
GGGTGCTCATGGTACAGTTTGCCACGAATTGGTCACACGTTTATTTCTCA
TTCCGTCAACGCGCTGCAAAATCTGCCTGTTTAATTTAGGCGAAAGGTAG
AGTTGCAGCAATGTTGTTGGTTTCAAGAAAATAAAGTATGAAGCCGCACC
GTGTTACTGCAGGGGGCCGAAAAACACCTCTCTGTTTGTCTTTTCTATTC
CAATGGCTCTCCTTCTTACTGTACGAATCTTCCCTTCTCCCACTGTAATT
ACCTGCATTCGTGACTACGGTGAAACGATAGGAGCGGTGCACACAACGCA
GTGCCGAGAGGTCGGGGTTAGAGGCGACACTCTGTTCGAGTCTAACACCG
TACCCGGTTCGGGCGGAGGCTTCTACGGCGGGAGTTGCGACAAGGTGTCT
CTAGAAGACGCCACCTTCCGCTCCAACCACGCCACATGGGGAGGTGAGAG
AGACACCCGACGGGATTAAGCACGTAACATGTTGTCACTTTGACGTCTAC
GATGCCCTATTTACTGCCGAATGTGCCACATTGGAGCCAACGCGCTTTCG
AAGACTCAAGGTCCTCACGCTGTCATCGGGTTGACGGGACCCTGACGAGC
AGAACGATGTTCGTTCGTTGCCCCTCCCCTGATCCTGTCCGTCTTCAGGA
GCAGTGGCGCTGGTCTCATGTGGCGAGGATGCGACCGTGCGGGGTTCGGC
AGCTACAACGAGTGCGTGTACCTTTGACGGGAACGAAGCCAGTGACGGCG
GGGGCATTTACTCCGCTTCTGGATTCGATCAGATCTCCGACTCTACGTTC
GTGAACAACGTCGCAGGTATCTCGGGACAGGCGCCAGAAGAGCAGTTTGG
CATTTGTTTTTGCGGTTTAGGGCGCGCGGCGTAATACCCCCCACCTTCCA
CCTTCCACCTTCCACCTTCCACCTTCCACCTTCCGGGGCATGCATGTGTT
CTCTTGTCGCCGAGTATGAGAGATGGGCAATTTAATGTTTAATGTACCTG
ACCACCCCCGCATCATATCGAAATTATCCTTCAGCATCCTCGGGAGGTGC
GTTGGCGCACTCTTCGGTGCTCCTGGCCTTGACGGGCAGCACGTTCCGAA
ACAACACGGCCAGAGAAGAAGGCTACGCGGTCATGAGTCTAGGGCCACTT
CACTCCATGGACGGCCTCGTGTTCGATGCCAACGTGCAGTATTGCGGCGT
CGGAACTTACGGCTACGAGAGAATCGAGGTA
back to top

Coding sequence (CDS) from alignment at C-linearis_contig10:886026..889056-

>mRNA_C-linearis_contig10.460.1 ID=mRNA_C-linearis_contig10.460.1|Name=mRNA_C-linearis_contig10.460.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1770bp|location=Sequence derived from alignment at C-linearis_contig10:886026..889056- (Chordaria linearis ClinC8C monoicous)
GTTTTCGGACGGAATGTGACCAGCTTGCACATCAGCGGCACATCAACGCT
CTCGGAGAATTCGGCCAGCACCGCCGGAGGTTTTCGGACGGAATGTGACC
AGCTTGCACATCAGCGGCACATCAACGCTCTCGGAGAATTCGGCCAGCAC
CGCCGGAGGCGCTTTCGCGGCGGAGCGGAGTTCCCTGACAATGGATACCC
AAAGGAGCGAGTTTGCAAACAACACAGCCGTATCGGGAGATGGAGGCGCT
TTCGCGGCGGAGCGGAGTTCCCTGACAATGGATACCCAAAGGAGCGAGTT
TGCAAACAACACAGCCGTATCGGGAGATGGAGGTGCGATTTCCTTGGACG
GACGCGGGGATATCGTCGACGACGGCACCACAGCGTTGCTCATCGGCGGG
ACTACATTTTTTACAGGGAACGCGGCGAAAAACAGCAGCGGGGGTGCGAT
TTCCTTGGACGGACGCGGGGATATCGTCGACGACGGCACCACAGCGTTGC
TCATCGGCGGGACTACATTTTTTACAGGGAACGCGGCGAAAAACAGCAGC
GGGGGTGCTCTTCACGTGCAAAGTTCCACCCTCACAGTCGTCGGCAACAC
GACATTCCTCTTCAACGTCGCAGGGATCGACGGAGGTGCTCTTCACGTGC
AAAGTTCCACCCTCACAGTCGTCGGCAACACGACATTCCTCTTCAACGTC
GCAGGGATCGACGGAGGAGCGGTGCACACAACGCAGTGCCGAGAGGTCGG
GGTTAGAGGCGACACTCTGTTCGAGTCTAACACCGTACCCGGTTCGGGCG
GAGGCTTCTACGGCGGGAGTTGCGACAAGGTGTCTCTAGAAGACGCCACC
TTCCGCTCCAACCACGCCACATGGGGAGGAGCGGTGCACACAACGCAGTG
CCGAGAGGTCGGGGTTAGAGGCGACACTCTGTTCGAGTCTAACACCGTAC
CCGGTTCGGGCGGAGGCTTCTACGGCGGGAGTTGCGACAAGGTGTCTCTA
GAAGACGCCACCTTCCGCTCCAACCACGCCACATGGGGAGGAGCAGTGGC
GCTGGTCTCATGTGGCGAGGATGCGACCGTGCGGGGTTCGGCAGCTACAA
CGAGTGCGTGTACCTTTGACGGGAACGAAGCCAGTGACGGCGGGGGCATT
TACTCCGCTTCTGGATTCGATCAGATCTCCGACTCTACGTTCGTGAACAA
CGTCGCAGGAGCAGTGGCGCTGGTCTCATGTGGCGAGGATGCGACCGTGC
GGGGTTCGGCAGCTACAACGAGTGCGTGTACCTTTGACGGGAACGAAGCC
AGTGACGGCGGGGGCATTTACTCCGCTTCTGGATTCGATCAGATCTCCGA
CTCTACGTTCGTGAACAACGTCGCAGCATCCTCGGGAGGTGCGTTGGCGC
ACTCTTCGGTGCTCCTGGCCTTGACGGGCAGCACGTTCCGAAACAACACG
GCCAGAGAAGAAGGCTACGCGGTCATGAGTCTAGGGCCACTTCACTCCAT
GGACGGCCTCGTGTTCGATGCCAACGTGCAGTATTGCGGCGTCGGAACTT
ACGGCTACGAGAGAATCGAGGTACATCCTCGGGAGGTGCGTTGGCGCACT
CTTCGGTGCTCCTGGCCTTGACGGGCAGCACGTTCCGAAACAACACGGCC
AGAGAAGAAGGCTACGCGGTCATGAGTCTAGGGCCACTTCACTCCATGGA
CGGCCTCGTGTTCGATGCCAACGTGCAGTATTGCGGCGTCGGAACTTACG
GCTACGAGAGAATCGAGGTA
back to top