mRNA_C-linearis_contig10.459.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.459.1

>prot_C-linearis_contig10.459.1 ID=prot_C-linearis_contig10.459.1|Name=mRNA_C-linearis_contig10.459.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=585bp
MLPSTGDTGVGPENAPGDMLSTCADVVPDVFGFSPIDDDDVVPWNNSSDE
PFCGAEGERFPSALASVVPSTGVFPPTNTGVVTFLDGSVMQIPYTLEGLR
LGSDVLNIFLDEGDMEFVPNGDYGEYANGPLSDTAAALLLRAFAAIAPKR
RPFRVGPTTNALEINYFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPC
VLVKGARAHTPRAGGRASEPGVTYHLDLCGAVTASLCGCMYLLVVVDSFS
RFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTEWTSDPFR
MFCANAGIRMEFTAPNTPQQNAPVENAIWRLMKGGTVCRRSAVLEFGIDY
SGIPNMDSRGDRLWLESVRFTAACFNRSGTKANPGNMSPYEVFTGTKPDA
IIVPFLQPLIMRKQRVIKLDDQGEPGYYLGQSHQHGRSTVRVLKVSTGRP
CHSRDIVFISGAAASAGKGEKLAPEFPPRSSVRRSAQLCHLHRQHRRIRR
RPTLRRRRSPRCRLRRPRNRSRCCRGRMAACGLAACDASAYSAVTHAAPA
AACAAARGRWATCGFADTGGDNASALSGGVAASIQ
back to top

mRNA from alignment at C-linearis_contig10:862363..864590+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.459.1 ID=mRNA_C-linearis_contig10.459.1|Name=mRNA_C-linearis_contig10.459.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2228bp|location=Sequence derived from alignment at C-linearis_contig10:862363..864590+ (Chordaria linearis ClinC8C monoicous)
GTGCGTGGTGATGACATTCCTATGCCTCTGAGATTCGTGCAAGTAGGGAG TGGTGAAATGCTGCGAGTTGTGACGAGAGGTAGCCTGATCGTTGACTTCC ACCGACGAAATTCTGATGACGTATGCGAGGATGTGCGAGTGGTTTTGACT GGAGTGTCCGCCGTCGAGGGCATGGGATTCAATTTGCTTTCTCTGCATGC ATTGTCTGAAACGATGGCCATCACGATCGACCCCCTTGGAGTGCACCTTC CCGCCAATGCTGTATCCCCAATGGGTTGACTTTCCCCCGGAATTCGTCCG GCGCGTCCTTGTATGCAACGCGTGTGCAATTCACCGGCACGGCTTTCGCT GCCTCTGGTGTTTCCTCTGGTTCGGTTTACCCCCACGAACCCCCCCCCGG TGATTTCCCCCCCGACCCGTCGCTGCTGCCGTTCAATGGTGGTGGCAACG GGGGTGGAGGGGCACCAAATGTGATGCTTCCATCCACCGGCGATACCGGA GTTGGGCCAGAAAATGCCCCCGGTGATATGCTTTCCACTTGCGCCGATGT AGTGCCTGACGTGTTTGGTTTCTCGCCCATCGATGACGACGATGTAGTGC CCTGGAATAACTCCTCTGACGAACCGTTTTGCGGGGCGGAAGGGGAGAGG TTTCCGTCCGCTCTCGCGAGCGTAGTACCTTCGACTGGCGTTTTTCCGCC CACAAACACGGGTGTAGTGACTTTTCTCGACGGGAGTGTGATGCAAATCC CATACACGCTTGAGGGGTTGAGGCTGGGTTCTGACGTGCTGAATATTTTT TTGGATGAGGGGGACATGGAATTTGTGCCCAACGGCGACTACGGCGAATA CGCCAATGGCCCTTTGTCTGACACAGCAGCTGCGCTTTTGTTGAGGGCTT TTGCTGCGATTGCCCCCAAACGTCGACCTTTCCGTGTTGGCCCGACCACT AACGCTTTGGAGATAAATTATTTCCACCGTTGCTCCGGCCACCTCTGCGA GTACCTGTTGAGGGAAACTGCAAAACAACAGGGTATCAAGCTCACGGGGA GGTTGGAGACGTGCGTGCCGTGCGTGTTGGTGAAGGGGGCGCGGGCTCAC ACCCCGAGGGCTGGCGGACGAGCGAGCGAGCCGGGTGTTACGTACCACCT GGACCTCTGTGGCGCCGTGACCGCGTCGCTCTGTGGCTGTATGTACTTGC TGGTGGTGGTGGACAGCTTCTCGAGGTTCATGCTCGCGTACGGCCTGCGG CGGAAGTCGGCTGCGCTCGACGGGTTCAAGGTGGCCATCACGGACCTCGC CAAGTACGGCCGCGGCGACATCCAGACCATCCGCGTCGACATGGGCACCG AGTGGACCTCCGACCCGTTCCGCATGTTCTGCGCCAATGCTGGGATCCGC ATGGAGTTTACCGCCCCAAACACACCACAACAGAACGCCCCCGTCGAGAA TGCGATTTGGCGTTTGATGAAGGGCGGGACCGTGTGCCGCAGGAGCGCTG TCTTGGAGTTCGGCATCGACTACTCCGGCATCCCGAACATGGACTCCCGC GGGGATCGTCTCTGGTTGGAGTCGGTGCGATTTACGGCCGCGTGCTTTAA TCGCAGCGGCACCAAGGCCAACCCCGGCAACATGTCGCCGTACGAGGTCT TCACGGGCACCAAGCCGGACGCCATCATCGTGCCGTTTCTGCAACCGCTC ATTATGCGGAAGCAGAGGGTGATCAAGCTCGACGACCAGGGCGAGCCTGG GTACTACCTCGGTCAGAGCCACCAACACGGGCGGTCCACGGTGCGGGTGC TCAAGGTGTCTACCGGGCGGCCATGCCACAGCAGGGACATCGTGTTCATT TCCGGCGCCGCCGCGTCTGCCGGGAAGGGGGAGAAGCTGGCGCCAGAGTT CCCGCCACGCAGCAGCGTCCGTCGTTCGGCCCAGCTCTGCCACCTCCATC GCCAGCACCGCCGTATACGCCGCCGTCCAACATTGCGCCGCCGCCGCTCG CCACGCTGCCGCCTACGCCGTCCTCGCAATCGCTCACGCTGTTGCCGGGG CCGCATGGCCGCATGCGGGCTTGCCGCCTGCGACGCTTCCGCTTACTCCG CCGTCACTCATGCCGCCCCCGCAGCCGCTTGCGCCGCTGCCCGGGGCCGC TGGGCCACGTGCGGGTTCGCCGATACCGGAGGAGACAACGCTTCCGCACT CAGCGGGGGTGTTGCCGCCTCTATCCAG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig10:862363..864590+

>mRNA_C-linearis_contig10.459.1 ID=mRNA_C-linearis_contig10.459.1|Name=mRNA_C-linearis_contig10.459.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3510bp|location=Sequence derived from alignment at C-linearis_contig10:862363..864590+ (Chordaria linearis ClinC8C monoicous)
ATGCTTCCATCCACCGGCGATACCGGAGTTGGGCCAGAAAATGCCCCCGG
TGATATGCTTTCCACTTGCGCCGATGTAGTGCCTGACGTGTTTGGTTTCT
CGCCCATCGATGACGACGATGTAGTGCCCTGGAATAACTCCTCTGACGAA
CCGTTTTGCGGGGCGGAAGGGGAGAGGTTTCCGTCCGCTCTCGCGAGCGT
AGTACCTTCGACTGGCGTTTTTCCGCCCACAAACACGGGTGTAGTGACTT
TTCTCGACGGGAGTGTGATGCAAATCCCATACACGCTTGAGGGGTTGAGG
CTGGGTTCTGACGTGCTGAATATTTTTTTGGATGAGGGGGACATGGAATT
TGTGCCCAACGGCGACTACGGCGAATACGCCAATGGCCCTTTGTCTGACA
CAGCAGCTGCGCTTTTGTTGAGGGCTTTTGCTGCGATTGCCCCCAAACGT
CGACCTTTCCGTGTTGGCCCGACCACTAACGCTTTGGAGATAAATTATTT
CCACCGTTGCTCCGGCCACCTCTGCGAGTACCTGTTGAGGGAAACTGCAA
AACAACAGGGTATCAAGCTCACGGGGAGGTTGGAGACGTGCGTGCCGTGC
GTGTTGGTGAAGGGGGCGCGGGCTCACACCCCGAGGGCTGGCGGACGAGC
GAGCGAGCCGGGTGTTACGTACCACCTGGACCTCTGTGGCGCCGTGACCG
CGTCGCTCTGTGGCTGTATGTACTTGCTGGTGGTGGTGGACAGCTTCTCG
AGGTTCATGCTCGCGTACGGCCTGCGGCGGAAGTCGGCTGCGCTCGACGG
GTTCAAGGTGGCCATCACGGACCTCGCCAAGTACGGCCGCGGCGACATCC
AGACCATCCGCGTCGACATGGGCACCGAGTGGACCTCCGACCCGTTCCGC
ATGTTCTGCGCCAATGCTGGGATCCGCATGGAGTTTACCGCCCCAAACAC
ACCACAACAGAACGCCCCCGTCGAGAATGCGATTTGGCGTTTGATGAAGG
GCGGGACCGTGTGCCGCAGGAGCGCTGTCTTGGAGTTCGGCATCGACTAC
TCCGGCATCCCGAACATGGACTCCCGCGGGGATCGTCTCTGGTTGGAGTC
GGTGCGATTTACGGCCGCGTGCTTTAATCGCAGCGGCACCAAGGCCAACC
CCGGCAACATGTCGCCGTACGAGGTCTTCACGGGCACCAAGCCGGACGCC
ATCATCGTGCCGTTTCTGCAACCGCTCATTATGCGGAAGCAGAGGGTGAT
CAAGCTCGACGACCAGGGCGAGCCTGGGTACTACCTCGGTCAGAGCCACC
AACACGGGCGGTCCACGGTGCGGGTGCTCAAGGTGTCTACCGGGCGGCCA
TGCCACAGCAGGGACATCGTGTTCATTTCCGGCGCCGCCGCGTCTGCCGG
GAAGGGGGAGAAGCTGGCGCCAGAGTTCCCGCCACGCAGCAGCGTCCGTC
GTTCGGCCCAGCTCTGCCACCTCCATCGCCAGCACCGCCGTATACGCCGC
CGTCCAACATTGCGCCGCCGCCGCTCGCCACGCTGCCGCCTACGCCGTCC
TCGCAATCGCTCACGCTGTTGCCGGGGCCGCATGGCCGCATGCGGGCTTG
CCGCCTGCGACGCTTCCGCTTACTCCGCCGTCACTCATGCCGCCCCCGCA
GCCGCTTGCGCCGCTGCCCGGGGCCGCTGGGCCACGTGCGGGTTCGCCGA
TACCGGAGGAGACAACGCTTCCGCACTCAGCGGGGGTGTTGCCGCCTCTA
TCCAGATGCTTCCATCCACCGGCGATACCGGAGTTGGGCCAGAAAATGCC
CCCGGTGATATGCTTTCCACTTGCGCCGATGTAGTGCCTGACGTGTTTGG
TTTCTCGCCCATCGATGACGACGATGTAGTGCCCTGGAATAACTCCTCTG
ACGAACCGTTTTGCGGGGCGGAAGGGGAGAGGTTTCCGTCCGCTCTCGCG
AGCGTAGTACCTTCGACTGGCGTTTTTCCGCCCACAAACACGGGTGTAGT
GACTTTTCTCGACGGGAGTGTGATGCAAATCCCATACACGCTTGAGGGGT
TGAGGCTGGGTTCTGACGTGCTGAATATTTTTTTGGATGAGGGGGACATG
GAATTTGTGCCCAACGGCGACTACGGCGAATACGCCAATGGCCCTTTGTC
TGACACAGCAGCTGCGCTTTTGTTGAGGGCTTTTGCTGCGATTGCCCCCA
AACGTCGACCTTTCCGTGTTGGCCCGACCACTAACGCTTTGGAGATAAAT
TATTTCCACCGTTGCTCCGGCCACCTCTGCGAGTACCTGTTGAGGGAAAC
TGCAAAACAACAGGGTATCAAGCTCACGGGGAGGTTGGAGACGTGCGTGC
CGTGCGTGTTGGTGAAGGGGGCGCGGGCTCACACCCCGAGGGCTGGCGGA
CGAGCGAGCGAGCCGGGTGTTACGTACCACCTGGACCTCTGTGGCGCCGT
GACCGCGTCGCTCTGTGGCTGTATGTACTTGCTGGTGGTGGTGGACAGCT
TCTCGAGGTTCATGCTCGCGTACGGCCTGCGGCGGAAGTCGGCTGCGCTC
GACGGGTTCAAGGTGGCCATCACGGACCTCGCCAAGTACGGCCGCGGCGA
CATCCAGACCATCCGCGTCGACATGGGCACCGAGTGGACCTCCGACCCGT
TCCGCATGTTCTGCGCCAATGCTGGGATCCGCATGGAGTTTACCGCCCCA
AACACACCACAACAGAACGCCCCCGTCGAGAATGCGATTTGGCGTTTGAT
GAAGGGCGGGACCGTGTGCCGCAGGAGCGCTGTCTTGGAGTTCGGCATCG
ACTACTCCGGCATCCCGAACATGGACTCCCGCGGGGATCGTCTCTGGTTG
GAGTCGGTGCGATTTACGGCCGCGTGCTTTAATCGCAGCGGCACCAAGGC
CAACCCCGGCAACATGTCGCCGTACGAGGTCTTCACGGGCACCAAGCCGG
ACGCCATCATCGTGCCGTTTCTGCAACCGCTCATTATGCGGAAGCAGAGG
GTGATCAAGCTCGACGACCAGGGCGAGCCTGGGTACTACCTCGGTCAGAG
CCACCAACACGGGCGGTCCACGGTGCGGGTGCTCAAGGTGTCTACCGGGC
GGCCATGCCACAGCAGGGACATCGTGTTCATTTCCGGCGCCGCCGCGTCT
GCCGGGAAGGGGGAGAAGCTGGCGCCAGAGTTCCCGCCACGCAGCAGCGT
CCGTCGTTCGGCCCAGCTCTGCCACCTCCATCGCCAGCACCGCCGTATAC
GCCGCCGTCCAACATTGCGCCGCCGCCGCTCGCCACGCTGCCGCCTACGC
CGTCCTCGCAATCGCTCACGCTGTTGCCGGGGCCGCATGGCCGCATGCGG
GCTTGCCGCCTGCGACGCTTCCGCTTACTCCGCCGTCACTCATGCCGCCC
CCGCAGCCGCTTGCGCCGCTGCCCGGGGCCGCTGGGCCACGTGCGGGTTC
GCCGATACCGGAGGAGACAACGCTTCCGCACTCAGCGGGGGTGTTGCCGC
CTCTATCCAG
back to top