Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 475 |
| Cds size | 471 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927325.484678-CDS-C-linearis_contig10:841393..841864 | 1622927325.484678-CDS-C-linearis_contig10:841393..841864 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 841394..841864 + |
| 1690879627.546031-CDS-C-linearis_contig10:841393..841864 | 1690879627.546031-CDS-C-linearis_contig10:841393..841864 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 841394..841864 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.456.1 >prot_C-linearis_contig10.456.1 ID=prot_C-linearis_contig10.456.1|Name=mRNA_C-linearis_contig10.456.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=157bp
SKQERPTNPKNLKLLLSPTEVQVQVPDGPLWNLCTHATGNQENTQPDVSC
QNRCLSISFRLRILFLLHASGHAIGCRRLRIVEEVEGAFSLQQVLVFPRK
TPGKTRADILRSDHGWGWHRTWGCFRSLLRGTSSSPPNRPGRNPHCSSGR
MSLASQY back to topmRNA from alignment at C-linearis_contig10:841394..841866+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.456.1 ID=mRNA_C-linearis_contig10.456.1|Name=mRNA_C-linearis_contig10.456.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=473bp|location=Sequence derived from alignment at C-linearis_contig10:841394..841866+ (Chordaria linearis ClinC8C monoicous)
TCAAAACAGGAACGGCCAACAAATCCTAAAAACTTAAAACTACTCCTGAG
TCCAACTGAAGTACAAGTGCAAGTACCGGACGGACCACTTTGGAACTTGT
GCACCCACGCGACCGGTAACCAGGAAAATACCCAGCCAGATGTATCGTGT
CAGAACAGATGTCTCTCGATATCATTCCGCCTAAGAATCCTATTCCTCCT
CCATGCCAGCGGACATGCCATCGGCTGTCGGCGCCTCCGTATTGTTGAGG
AGGTCGAAGGTGCTTTCAGCCTCCAACAAGTCCTTGTCTTCCCCCGAAAA
ACGCCCGGGAAGACACGAGCGGATATTCTTCGGAGCGATCATGGATGGGG
ATGGCACCGTACGTGGGGATGCTTTCGAAGTTTGCTTAGAGGAACATCAT
CATCTCCACCCAATCGGCCAGGTCGGAACCCGCACTGCTCCTCCGGAAGG
ATGTCGTTGGCTTCGCAGTATGC back to topCoding sequence (CDS) from alignment at C-linearis_contig10:841394..841866+ >mRNA_C-linearis_contig10.456.1 ID=mRNA_C-linearis_contig10.456.1|Name=mRNA_C-linearis_contig10.456.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at C-linearis_contig10:841394..841866+ (Chordaria linearis ClinC8C monoicous)
TCAAAACAGGAACGGCCAACAAATCCTAAAAACTTAAAACTACTCCTGAG
TCCAACTGAAGTACAAGTGCAAGTACCGGACGGACCACTTTGGAACTTGT
GCACCCACGCGACCGGTAACCAGGAAAATACCCAGCCAGATGTATCGTGT
CAGAACAGATGTCTCTCGATATCATTCCGCCTAAGAATCCTATTCCTCCT
CCATGCCAGCGGACATGCCATCGGCTGTCGGCGCCTCCGTATTGTTGAGG
AGGTCGAAGGTGCTTTCAGCCTCCAACAAGTCCTTGTCTTCCCCCGAAAA
ACGCCCGGGAAGACACGAGCGGATATTCTTCGGAGCGATCATGGATGGGG
ATGGCACCGTACGTGGGGATGCTTTCGAAGTTTGCTTAGAGGAACATCAT
CATCTCCACCCAATCGGCCAGGTCGGAACCCGCACTGCTCCTCCGGAAGG
ATGTCGTTGGCTTCGCAGTATTCAAAACAGGAACGGCCAACAAATCCTAA
AAACTTAAAACTACTCCTGAGTCCAACTGAAGTACAAGTGCAAGTACCGG
ACGGACCACTTTGGAACTTGTGCACCCACGCGACCGGTAACCAGGAAAAT
ACCCAGCCAGATGTATCGTGTCAGAACAGATGTCTCTCGATATCATTCCG
CCTAAGAATCCTATTCCTCCTCCATGCCAGCGGACATGCCATCGGCTGTC
GGCGCCTCCGTATTGTTGAGGAGGTCGAAGGTGCTTTCAGCCTCCAACAA
GTCCTTGTCTTCCCCCGAAAAACGCCCGGGAAGACACGAGCGGATATTCT
TCGGAGCGATCATGGATGGGGATGGCACCGTACGTGGGGATGCTTTCGAA
GTTTGCTTAGAGGAACATCATCATCTCCACCCAATCGGCCAGGTCGGAAC
CCGCACTGCTCCTCCGGAAGGATGTCGTTGGCTTCGCAGTAT back to top
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