mRNA_C-linearis_contig10.441.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: D7FTK3_ECTSI (Myb-like DNA-binding domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK3_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 1.630e-85
Identity = 137/167 (82.04%), Postives = 151/167 (90.42%), Query Frame = 2

Query:  797 SRDGRRTWTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDYKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEYMKLSRDAS 1297
            SRDGRRTWTDAESDRLREVVEH +AG++RKNWQWVAA+              CKMRWERILNPGVKRGLWTKEEDQKLKEVAAA +YKWSHVAK+MGGRTYKQCRERYTNYLK+GLNVGPW+KEED+LLL+MHA++GNKWAEIAR+LKDRSENMIKNEYMKLSRDA+
Sbjct:   69 SRDGRRTWTDAESDRLREVVEHRSAGDSRKNWQWVAAK--------------CKMRWERILNPGVKRGLWTKEEDQKLKEVAAAMEYKWSHVAKLMGGRTYKQCRERYTNYLKEGLNVGPWTKEEDQLLLSMHAKVGNKWAEIARYLKDRSENMIKNEYMKLSRDAN 221

[Close]

BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A024GD30_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GD30_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.830e-29
Identity = 77/166 (46.39%), Postives = 104/166 (62.65%), Query Frame = 2

Query:  812 RTWTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDYKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEYMKLSRDASHRRL 1309
            R WT  E + LR  VE S  GE  +NW+ +A +V      GR   +QC  RW ++L PG+ +G WT EED KLK + A     W HVA M+ GRT KQCRER+ N+L   +N G +S+EEDR++L M AR+GN+W+ IA+HLK R+E+ +K  +  L R   HR L
Sbjct:  115 RRWTKQEDEALRLAVERS--GE--RNWKTIADQV-----PGR-NHTQCLQRWTKVLKPGLIKGHWTIEEDAKLKGLVANGIRNWGHVASMIPGRTSKQCRERWCNHLDPNINKGSYSEEEDRIILEMQARLGNRWSVIAQHLKGRTEDAVKIRWKSLKR--GHRSL 268

[Close]

BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: F0W430_9STRA (Myblike DNAbinding protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W430_9STRA)

HSP 1 Score: 134 bits (336), Expect = 7.440e-29
Identity = 73/159 (45.91%), Postives = 101/159 (63.52%), Query Frame = 2

Query:  812 RTWTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDYKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEYMKLSR 1288
            R WT  E + LR  VE S  GE  +NW+ +A +V      GR   +QC  RW ++L PG+ +G WT EED KLK + A     W HVA M+ GRT KQCRER+ N+L   +N G +S+EEDR++L M A++GN+W+ IA+HLK R+E+ +K  +  L R
Sbjct:  122 RRWTKQEDEALRLAVERS--GE--RNWKTIADQV-----PGR-NHTQCLQRWTKVLKPGLIKGHWTIEEDNKLKGLVANVIRNWGHVASMIPGRTSKQCRERWCNHLDPSINKGSYSEEEDRIILEMQAKLGNRWSVIAQHLKGRTEDAVKIRWKSLKR 270

[Close]

BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A7S4EQR6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQR6_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.180e-28
Identity = 71/166 (42.77%), Postives = 103/166 (62.05%), Query Frame = 2

Query:  818 WTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAF-DYKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEYMK-----LSRDAS 1297
            WT+ E D LRE V    A    K+W+ +A R+      GR T  QC  RW+++L PG+ +G WT EED K+ E+     + KWS +A+ + GR  KQCRER+ N+L   +N G W+ +ED+LL+  H+ +GN+WAEIA+ LK R++N IKN +       +S+DAS
Sbjct:  170 WTEEEDDLLREAV----ANYGGKSWKKIAGRL-----TGR-TDVQCLHRWQKVLKPGLIKGPWTPEEDAKVVELVKVHGNKKWSFIARQLKGRLGKQCRERWYNHLNPDINKGEWTNDEDKLLIQAHSELGNRWAEIAKRLKGRTDNAIKNRWNSTLKRIMSKDAS 325

[Close]

BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: F0Y8W2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8W2_AURAN)

HSP 1 Score: 121 bits (304), Expect = 2.850e-28
Identity = 64/155 (41.29%), Postives = 95/155 (61.29%), Query Frame = 2

Query:  818 WTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKE-VAAAFD--YKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEY 1273
            WT  E ++LR+ +E S   E  ++W  +AA   E    G ++P QC+ RWE++L  G+ +G WT  ED+ ++  V A  D  + WS VAK++ GR  KQ RER+ N+L   L   PW+  ED LL+++ A +GN+W EI+R  + RSEN IKN +
Sbjct:    1 WTKREDEKLRQTIEASGPDEGARDWAKIAAAAFE----GGRSPGQCEDRWEKVLKLGLVKGPWTPHEDEVVRRAVGAGVDAAFNWSEVAKLLPGRLTKQVRERWQNHLDPQLVKTPWTPNEDYLLVSLQAVLGNRWNEISRAFQGRSENAIKNRW 151

[Close]

BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A2R6W541_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W541_MARPO)

HSP 1 Score: 125 bits (315), Expect = 3.920e-28
Identity = 65/154 (42.21%), Postives = 94/154 (61.04%), Query Frame = 2

Query:  815 TWTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDYK-WSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEY 1273
            +WT  E + LR  VE        +NW+ +AA +   S A      QC  RW+++LNP + +G W+KEED K+ E+   F  K W+ +A+ M GR  KQCRER+ N+L   +   PWS+EED +L+  H R+GN+WAEIA+ +  RS+N IKN +
Sbjct:   58 SWTAEEDETLRAAVEKFKG----RNWKQIAASLPNRSDA------QCLHRWQKVLNPILVKGYWSKEEDDKMLELVKTFGTKRWAAIARAMPGRNSKQCRERWCNHLDPKIKKEPWSEEEDMMLVMAHQRLGNRWAEIAKIIPGRSDNAIKNRW 201

[Close]

BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A6A7G5F5_9CRUS (Myb-related protein A n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G5F5_9CRUS)

HSP 1 Score: 132 bits (333), Expect = 4.780e-28
Identity = 65/153 (42.48%), Postives = 98/153 (64.05%), Query Frame = 2

Query:  818 WTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFD-YKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEY 1273
            WT AE   L++ V  +N     KNW+    R+    G  +KT  QC  RW+++LNP + +G WT EED K+ E+   F   KWS +AK + GR  KQCRER+ N+L  G+  GPW+K+E++L+++ H R+GN+WAEI++ L  R++N +KN +
Sbjct:   41 WTPAEDRALKDAVVSNNG----KNWK----RIASSFGVNKKTDVQCLHRWQKVLNPELVKGPWTHEEDSKVLEMVDKFGPKKWSSIAKYLPGRIGKQCRERWHNHLNSGICKGPWTKDEEKLIVSAHNRLGNRWAEISKLLPGRTDNAVKNHW 185

[Close]

BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A2V3J1G3_9FLOR (Transcription factor MYB3R-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1G3_9FLOR)

HSP 1 Score: 133 bits (334), Expect = 4.840e-28
Identity = 72/171 (42.11%), Postives = 101/171 (59.06%), Query Frame = 2

Query:  800 RDGRRTWTDAESDRLREVV-EHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDY-KWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEYMKLSRDASHRR 1306
            R  +  WT  E D LR VV EH     N KNW+ +A  +        +   QC  RW+++L PG+K+G WT+ ED  +  + A     KWS +AK + GR  KQCRER+ N+L   +N  PW++EE+R+L   H+RIGNKWA IA++L  R++N IKN Y    R A+ R+
Sbjct:  234 RSSKGGWTRDEDDMLRVVVMEH-----NEKNWKDIAKALNASFPGSSRNDVQCLHRWQKVLQPGLKKGPWTQHEDDTITRLVATLGANKWSLIAKQLPGRIGKQCRERWFNHLNPEINKDPWTEEEERILREAHSRIGNKWAVIAKYLPGRTDNAIKNHYNATQRRAATRK 399

[Close]

BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A7R9TWF4_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TWF4_MICPS)

HSP 1 Score: 124 bits (310), Expect = 6.510e-28
Identity = 69/167 (41.32%), Postives = 94/167 (56.29%), Query Frame = 2

Query:  776 GAAGGLNSRDGRRTWTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDYK-WSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEY 1273
            G  GG   R  +  WT  E D LR  V H       KNW+ +A    E      +T  QC  RW+++LNP + +G WTKEED K+ E+  A   K WS +A+ + GR  KQCRER+ N+L   +    WS+EED+ L+  HA  GN+WAEIA+    R++N IKN +
Sbjct:   30 GRTGGPTRRSAKGGWTPDEDDILRRAVAHYKG----KNWKKIAEYFEE------RTDVQCLHRWQKVLNPELVKGPWTKEEDDKIIELVKALGAKQWSKIAQQLPGRIGKQCRERWYNHLNPEIKREEWSREEDQKLIVAHAEYGNRWAEIAKTFVGRTDNAIKNHW 186

[Close]

BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: E1ZCZ2_CHLVA (Uncharacterized protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZCZ2_CHLVA)

HSP 1 Score: 120 bits (300), Expect = 9.830e-28
Identity = 61/159 (38.36%), Postives = 95/159 (59.75%), Query Frame = 2

Query:  800 RDGRRTWTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKL-KEVAAAFDYKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEY 1273
            R+GR  W+  E + LR +V    A    KNW+ +A    +      +T  QC  RW+++LNP V +G WT +ED+ + + VA     KW+ +A+ + GR  KQCRER+ N+L   +  G W++ ED +++  H R GN+WA +A+HLK R++N IKN +
Sbjct:    2 RNGRGGWSKQEDELLRRMVAQYGA----KNWKKIAEHFAD------RTDVQCLHRWQKVLNPEVHKGPWTPDEDEAIIRLVALHGPQKWTMIAEYLPGRIGKQCRERWHNHLNPAIKRGQWTRHEDEVIVRFHRRFGNQWARMAQHLKGRTDNAIKNHW 150

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot

BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7FTK3_ECTSI	1.630e-85	82.04	Myb-like DNA-binding domain n=1 Tax=Ectocarpus sil...	[more]
A0A024GD30_9STRA	2.830e-29	46.39	Uncharacterized protein n=1 Tax=Albugo candida Tax...	[more]
F0W430_9STRA	7.440e-29	45.91	Myblike DNAbinding protein putative n=1 Tax=Albugo...	[more]
A0A7S4EQR6_9STRA	2.180e-28	42.77	Hypothetical protein n=1 Tax=Pseudo-nitzschia aust...	[more]
F0Y8W2_AURAN	2.850e-28	41.29	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
A0A2R6W541_MARPO	3.920e-28	42.21	Uncharacterized protein n=3 Tax=Marchantia polymor...	[more]
A0A6A7G5F5_9CRUS	4.780e-28	42.48	Myb-related protein A n=1 Tax=Hirondellea gigas Ta...	[more]
A0A2V3J1G3_9FLOR	4.840e-28	42.11	Transcription factor MYB3R-3 n=1 Tax=Gracilariopsi...	[more]
A0A7R9TWF4_MICPS	6.510e-28	41.32	Hypothetical protein (Fragment) n=1 Tax=Micromonas...	[more]
E1ZCZ2_CHLVA	9.830e-28	38.36	Uncharacterized protein (Fragment) n=1 Tax=Chlorel...	[more]

ZOOM

x 1

POSITION

0

Pages