prot_A-nodosum_M_contig1025.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1025.9.1
Unique Nameprot_A-nodosum_M_contig1025.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length184
Homology
BLAST of mRNA_A-nodosum_M_contig1025.9.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 57.8 bits (138), Expect = 4.620e-8
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   52 NQGKYDGVEALHKRALAIRENTLGPRHPDVASSLNNLAGL 91
            +QGKY+  E L++RAL IRE  LGP HP VA++LNNLAGL
Sbjct:    3 SQGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42          
BLAST of mRNA_A-nodosum_M_contig1025.9.1 vs. uniprot
Match: U9W4Q0_9CYAN (Kinesin light chain 1 (Fragment) n=1 Tax=Leptolyngbya sp. Heron Island J TaxID=1385935 RepID=U9W4Q0_9CYAN)

HSP 1 Score: 58.2 bits (139), Expect = 4.750e-8
Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   53 QGKYDGVEALHKRALAIRENTLGPRHPDVASSLNNLAGL 91
            QG+Y+  E L++R+L IRE  LGP+HPDV +SLNNLAGL
Sbjct:    2 QGRYEEAEPLYQRSLGIREEQLGPQHPDVVTSLNNLAGL 40          
BLAST of mRNA_A-nodosum_M_contig1025.9.1 vs. uniprot
Match: UPI001F0F39F4 (tetratricopeptide repeat protein n=1 Tax=Thiorhodococcus mannitoliphagus TaxID=329406 RepID=UPI001F0F39F4)

HSP 1 Score: 56.6 bits (135), Expect = 5.820e-7
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0
Query:   53 QGKYDGVEALHKRALAIRENTLGPRHPDVASSLNNLA 89
            QG+Y   E L KRALA+RE TLGP+HPDVA SL+N+A
Sbjct:    8 QGRYTEAEPLQKRALALREETLGPKHPDVAMSLSNMA 44          
BLAST of mRNA_A-nodosum_M_contig1025.9.1 vs. uniprot
Match: D7G180_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G180_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 6.010e-7
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0
Query:   51 VNQGKYDGVEALHKRALAIRENTLGPRHPDVASSLNNLAGLLKS 94
            V QGKY+  E LH+R+LAI E   GP HP+VA+ L+NLAGLL+S
Sbjct:  152 VAQGKYEEAEPLHRRSLAIDEEVYGPDHPNVATGLSNLAGLLES 195          
BLAST of mRNA_A-nodosum_M_contig1025.9.1 vs. uniprot
Match: UPI0013D05A06 (tetratricopeptide repeat-containing protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D05A06)

HSP 1 Score: 57.8 bits (138), Expect = 8.230e-7
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   52 NQGKYDGVEALHKRALAIRENTLGPRHPDVASSLNNLAGL 91
            +QGKY+  E L++RAL IRE  LGP HP VA++LNNLAGL
Sbjct:    3 SQGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42          
BLAST of mRNA_A-nodosum_M_contig1025.9.1 vs. uniprot
Match: UPI0004B72C22 (tetratricopeptide repeat protein n=1 Tax=Chloroflexus sp. Y-396-1 TaxID=867845 RepID=UPI0004B72C22)

HSP 1 Score: 57.8 bits (138), Expect = 1.750e-6
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   54 GKYDGVEALHKRALAIRENTLGPRHPDVASSLNNLAGLLK 93
            G+Y     L++RALAIRE TLGP HPD A+SLNNLAGLL+
Sbjct:  773 GEYAVARPLYERALAIRERTLGPDHPDTATSLNNLAGLLE 812          
BLAST of mRNA_A-nodosum_M_contig1025.9.1 vs. uniprot
Match: A0A1I3XVU7_9DELT (Tfp pilus assembly protein PilF (Fragment) n=1 Tax=Desulfomicrobium apsheronum TaxID=52560 RepID=A0A1I3XVU7_9DELT)

HSP 1 Score: 57.4 bits (137), Expect = 2.140e-6
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   52 NQGKYDGVEALHKRALAIRENTLGPRHPDVASSLNNLAGL 91
            NQG Y   E+L+KR+LAIRE  LGP HPDVA+SL+NLA L
Sbjct:    4 NQGDYAQAESLYKRSLAIREKALGPDHPDVATSLSNLAEL 43          
BLAST of mRNA_A-nodosum_M_contig1025.9.1 vs. uniprot
Match: A0A6P0R2E4_9CYAN (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Microcoleus sp. SIO2G3 TaxID=2607795 RepID=A0A6P0R2E4_9CYAN)

HSP 1 Score: 53.9 bits (128), Expect = 3.680e-6
Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 0
Query:   52 NQGKYDGVEALHKRALAIRENTLGPRHPDVASSLNNLAGLLKS 94
            +QG+Y   E+L+ +ALA+R   LG  HP++ASSLNNLAGL +S
Sbjct:    1 SQGRYSEAESLYVQALALRRQLLGEEHPNLASSLNNLAGLYRS 43          
BLAST of mRNA_A-nodosum_M_contig1025.9.1 vs. uniprot
Match: UPI001E5491FA (tetratricopeptide repeat protein n=1 Tax=Pseudanabaena sp. 'Roaring Creek' TaxID=1681830 RepID=UPI001E5491FA)

HSP 1 Score: 52.4 bits (124), Expect = 4.000e-6
Identity = 22/40 (55.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   52 NQGKYDGVEALHKRALAIRENTLGPRHPDVASSLNNLAGL 91
            +QG+Y   E L+K+A+A+ +  LG RHP+VA+S+NNLAGL
Sbjct:    4 SQGRYKEAEPLYKQAIALMQEILGERHPNVATSINNLAGL 43          
BLAST of mRNA_A-nodosum_M_contig1025.9.1 vs. uniprot
Match: A0A7S1C9P3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9P3_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 4.240e-6
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:   53 QGKYDGVEALHKRALAIRENTLGPRHPDVASSLNNLAGLL 92
            Q ++D  EA+H+RALA+RE  LGP H D+A SLNNLA LL
Sbjct:  171 QRRFDEAEAMHRRALAMREELLGPSHVDIALSLNNLANLL 210          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1025.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0013D295284.620e-865.00tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
U9W4Q0_9CYAN4.750e-864.10Kinesin light chain 1 (Fragment) n=1 Tax=Leptolyng... [more]
UPI001F0F39F45.820e-767.57tetratricopeptide repeat protein n=1 Tax=Thiorhodo... [more]
D7G180_ECTSI6.010e-761.36TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
UPI0013D05A068.230e-765.00tetratricopeptide repeat-containing protein n=1 Ta... [more]
UPI0004B72C221.750e-667.50tetratricopeptide repeat protein n=1 Tax=Chlorofle... [more]
A0A1I3XVU7_9DELT2.140e-667.50Tfp pilus assembly protein PilF (Fragment) n=1 Tax... [more]
A0A6P0R2E4_9CYAN3.680e-655.81Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
UPI001E5491FA4.000e-655.00tetratricopeptide repeat protein n=1 Tax=Pseudanab... [more]
A0A7S1C9P3_9STRA4.240e-662.50Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 55..73
score: 34.74
coord: 164..183
score: 45.24
coord: 120..137
score: 48.89
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 124..157
e-value: 0.029
score: 23.5
coord: 82..115
e-value: 0.036
score: 23.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 82..115
score: 9.1454
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 124..157
score: 8.8209
NoneNo IPR availablePFAMPF13424TPR_12coord: 80..156
e-value: 7.0E-23
score: 80.7
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 107..179
coord: 52..113
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 43..182
e-value: 2.1E-54
score: 186.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 51..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1025contigA-nodosum_M_contig1025:145525..164071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1025.9.1mRNA_A-nodosum_M_contig1025.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1025 145525..164071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1025.9.1 ID=prot_A-nodosum_M_contig1025.9.1|Name=mRNA_A-nodosum_M_contig1025.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=184bp
GQSSFLPAALIDFRDKSKREERHQETIPGNIGEMATTGGSTTAGISSASR
VNQGKYDGVEALHKRALAIRENTLGPRHPDVASSLNNLAGLLKSQGKYDD
AGQLYKRALAIRENTLGPRHPDVASSLNDLAGLLQSQSKYDDAEQLYKRA
LAIRENTLVPRHPDVASSLNNLAGLLKSQVMWH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf