prot_A-nodosum_M_contig1022.28.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1022.28.1
Unique Nameprot_A-nodosum_M_contig1022.28.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length536
Homology
BLAST of mRNA_A-nodosum_M_contig1022.28.1 vs. uniprot
Match: A0A6H5JV51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV51_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 9.350e-49
Identity = 220/662 (33.23%), Postives = 284/662 (42.90%), Query Frame = 0
Query:   32 DEAAAVTSAVPAAREFAAKMGELASVAPGLSALLVAVTGTLGEAA---QSTPTTGEPVARGQGTEVPRTQSVDACNDLHEILKVVLPTLAQLLSFDHLRASPSIARNLVHALANLYVRVGRTAAGNVGDGGSQQGGHGSTRSSPEGTPSRS---HKSPESSLGSLGPPSTDGSGS---------------------------MNVSG------NNKLQRERMGKKTASWVSSILTQAFAPKVYGGRTVRSSGLDALLGENGVDSAEHHRAVQAEILHNTLALQDLAAEGL-AFRRGRRREAGWR-------------------------IKHQEDSREI--------------------LFETILKAFGSVLRTGED---------EDGEAPAMQL----LLARL-REDSYRLLAGREIDWEAEDGEIKR--PRESLPEG---------APLQGGD---------CL----------------------RDQQATLPISPSIWSQSIAASSSGTRRKHPEFYLPTPTRKRRSFLGPFLAPHPLP--------------HEWESRVRDCLAALKHRPFLCPDELLRSTGAVPNLVPEAYTGEAWRRTPSTVD-------RFSDGFRLSDVCLLLALDVLEEAVLEEGGGELEAGLLRALRTPR 531
            +E+ A+ +A+P A+EFA KM ELASV PGLS  LV +T      +    STP+      RG G   PR+ S D  + + E++KV  P LA+LLSF+HLRAS S  R+LV AL NLYV V     G+       Q   GS+ +S     SR    HK P  + GS  P S     S                           M+VSG      +    RE++ KK ASWV+SIL QA APKVYGG+ VRS GLD LLG  GV +A H RAVQAE+L +T  L  L AE L + R+  +R  G                           ++ +  SR+                     L  T++ A       G            +  AP   +      +RL R++   LL   E D     G  +   P E L E          AP+ GG          CL                      R+    +P S    S S+AAS++  +   PE       ++ R      L P PLP               EWE RV+ CL+ LK RP  CPD LLR+TGAVP+L  E        R   +V          + GF LS+ CLL+ L+V+EEAVL  GG E  AGLLRA RT R
Sbjct:   85 EESPAMAAALPPAQEFADKMVELASVVPGLSRSLVELTAATTSTSVDGHSTPSADTAGKRG-GLAQPRSSSADF-DYVQEVIKVAPPVLARLLSFEHLRASESTGRDLVQALVNLYVGVRSPGLGSA----VFQASRGSSATSLLPASSRDSCLHKPPAPAAGSSTPSSAGSHASSRARMSASVDTSTAPSTVSPAGTIGATMSVSGVRATSISQAHHREKLAKKAASWVASILKQAVAPKVYGGKLVRSKGLDELLGRRGVTAAHHDRAVQAELLKSTEVLLGLTAEDLHSKRKTNKRSIGLSNRGVPSAYIPNKSHININSMNNNESVQQERPSRKRPRPAFTSASSRATPKASPVRLGATMIMAGARQQSLGAGTPHCCANPTHNTSAPGFPVEAGARTSRLFRDEGDFLLEACEEDMGLRLGSARTESPSELLLEHTVRVLSVMLAPMGGGSQLPSQLLHSCLQQNAYHLLGGPICSGKASSQVGREPPLLIPNSDHRGSASLAASAAPKQLMSPE------KQQGRQEFRSGLQPLPLPPTSLLLPKDHSSALSEWEERVQGCLSTLKSRPLRCPDALLRATGAVPSLHSEVCVRGGMARESRSVSVDAAKGRNSTRGFALSEACLLVGLNVVEEAVLGTGG-EAAAGLLRAFRTVR 733          
BLAST of mRNA_A-nodosum_M_contig1022.28.1 vs. uniprot
Match: D7FWC0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC0_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 3.040e-32
Identity = 180/648 (27.78%), Postives = 240/648 (37.04%), Query Frame = 0
Query:   32 DEAAAVTSAVPAAREFAAKMGELASVAPGLSALLVAVTGTLGEAA---QSTPTTGEPVARGQGTEVPRTQSVDACNDLHEILKVVLPTLAQLLSFDHLRASPSIARNLVHALANLYVRVGRTAAGNVGDGGSQQGGHGSTRSSPEGTPSRSHKSPESSLGSLGPPSTDGSGSMNVSGNNKLQRERMGKKTASWVSSILTQAFAPKVYGGRTVRSSGLDALLGENGVDSAEHHRAVQAEILHNTLALQDLAAEGLAFRRGRRREA----------------------------------------------------------------------------------------------------------------------------GWRIKHQEDSREILFETILKAFGSVLRTGEDEDGEAPAMQLLLARLREDSYRLLAGREIDWEAEDGEIKRPRESLPEGAPLQGGDCLRDQQATLPISPSIWSQSIAASSSGTRRKHPEFYLPTPTRKRRSFLGPFLAPHPLP--------------HEWESRVRDCLAALKHRPFLCPDELLRSTGAVPNLVPEAYTGEAWRRTPSTVD-------RFSDGFRLSDVCLLLALDVLEEAVLEEGGGELEAGLLRALRTPR 531
            +E+ A+ +A+P A+EFA KM ELASV PGLS  LV +T      +    STP+  +   +G G   P   S D  + + E++KV  P LA+LLSF+HLRAS +  R+LV AL NLYV V                                 +SP   LGS                                           +VYGG+ VRS GLD LLG  GV +A H RAVQAE+L NT  L  L AEGL  +R   + +                                                                                                                            G R    E   E+L E  ++A  ++L        + P+ QLL A L++D+Y LLAG           I+  + S   G         R+    +P +    S S++AS++  +   PE       ++ R      + P PLP               EWE RV+ CL+ L+ RP LCPD LLR+TGA P+L  E        R   +V          + GF LS+ CL + LDV+EEAVL  GG E  AGLLRA RT R
Sbjct:  174 EESPAMAAALPLAQEFADKMVELASVVPGLSRSLVELTAATTSTSVDGHSTPS-ADTAGKGGGLTQPPLPSADF-DYVQEVIKVAPPVLARLLSFEHLRASETTGRDLVQALVNLYVGV---------------------------------RSP--GLGSA----------------------------------------VSQVYGGKLVRSKGLDELLGRRGVTAAHHDRAVQAELLKNTEVLLGLTAEGLRSKRKANKRSIGLSDQCVPSAYIPNNKSHINISSINNNGSGPQERPSRKRPRPAFTSASSRATPKASPARLGATMTTAGAGQQSLAAGTPDCCVNPTHNTSVPGFPVEAGAGTSRLFRDEGGFLLEACEEDMGLGLRSPKTEGPPELLLEHTVRALSAML-VPMGGGSQLPS-QLLHACLQQDAYHLLAG----------PIRSGKASSQVG---------REPPFLIPNNDHRGSASLSASAAPQQLMSPE------KQQGRQEFRSGVQPLPLPPASLLLPKDHSPALSEWEERVQGCLSTLESRPLLCPDALLRATGAAPSLPSEVCVRGGMAREGRSVSVDAAKGRNNNRGFPLSEACLFVGLDVVEEAVLGRGG-EAAAGLLRAFRTVR 716          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1022.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JV51_9PHAE9.350e-4933.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWC0_ECTSI3.040e-3227.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1022contigA-nodosum_M_contig1022:175069..178949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1022.28.1mRNA_A-nodosum_M_contig1022.28.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1022 174397..178949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1022.28.1 ID=prot_A-nodosum_M_contig1022.28.1|Name=mRNA_A-nodosum_M_contig1022.28.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=536bp
MEGAMLRTEEGSSALNCSATSTIAVGESASEDEAAAVTSAVPAAREFAAK
MGELASVAPGLSALLVAVTGTLGEAAQSTPTTGEPVARGQGTEVPRTQSV
DACNDLHEILKVVLPTLAQLLSFDHLRASPSIARNLVHALANLYVRVGRT
AAGNVGDGGSQQGGHGSTRSSPEGTPSRSHKSPESSLGSLGPPSTDGSGS
MNVSGNNKLQRERMGKKTASWVSSILTQAFAPKVYGGRTVRSSGLDALLG
ENGVDSAEHHRAVQAEILHNTLALQDLAAEGLAFRRGRRREAGWRIKHQE
DSREILFETILKAFGSVLRTGEDEDGEAPAMQLLLARLREDSYRLLAGRE
IDWEAEDGEIKRPRESLPEGAPLQGGDCLRDQQATLPISPSIWSQSIAAS
SSGTRRKHPEFYLPTPTRKRRSFLGPFLAPHPLPHEWESRVRDCLAALKH
RPFLCPDELLRSTGAVPNLVPEAYTGEAWRRTPSTVDRFSDGFRLSDVCL
LLALDVLEEAVLEEGGGELEAGLLRALRTPRIAEVG
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