mRNA_A-nodosum_M_contig1020.18.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1020.18.1 vs. uniprot
Match: A0A6H5JSJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSJ9_9PHAE) HSP 1 Score: 497 bits (1280), Expect = 3.350e-166 Identity = 282/493 (57.20%), Postives = 350/493 (70.99%), Query Frame = 3
Query: 297 MYQPPIVSYPVFSVKWSKATDADGVTTPAVVAAGGGGAGKTGVGNKISLIAFKRGAKTPSHDIAFELETSPETSNYVAASENGQLIAAAFGKTVRVFSCNPSGFHKLHDLEADFAEKESGINSMEFSGDASHEGTDDARD---GVRL-ATGGEDGVLRVWDVSA---------AESERR-CLSDLQMFECKGHTKPITCVVFHAAGDMLLTASKDGTCRLWDWRRGVEMALFPTASGLP--SSVA-TPKVICRSCCFSPSKPDAVFTLQSGLRGSAYVTQWRYAQAATGVETPVAGPEGHGPGPGGERFTVGAVHVKRVSPHPATSMSVRTDGRRLAVANVEGTVVVYRLPGLAKVMEYRAHDLPVTGMEFASEQTGVALKGYDLLAGSADYKVTLLKSQGSAISVMFRQFLAFLWSIISAMATVIFWLVAAIFWVLQGFEVAVLIVVPIVGLVALGLALYHHPKELLSTIRRVIKLEGDDGQANNLDEDPLV 1724
MYQPPIV++PVFSV WS+ATDA+G +PAV+AAGGGGAG TGVGNKIS IAFK GA+ PSH IA ELETSPET N VAAS NGQL+AAAFGK VR+++ NPSGFH+L ++EADFA KESG+ SM F D ++ G+D +R+ GV L ATGGEDGVLRVW++ A E ER LS + CKGH KP+TCV FH +G ++LTASKDGTCRLWD RG E AL PT SGLP +S+A P ++CRSCCFSP +PDA+F++QS RG+AYVT+WRY+ P+ PG G V V V VSPHPATS+SVR+DG RLAV NVEGTV+VYRLPG AKVMEY AHDLPVTG+ FA+ + G AL GYDLLAGSADYK++L KSQGSA + RQ + LWS++ ++ AI W+++ L V+P++GLVAL LA+ + P+EL + +R +I E + G + D +P V
Sbjct: 2 MYQPPIVNFPVFSVVWSEATDANGAASPAVLAAGGGGAGNTGVGNKISSIAFKGGAQQPSHTIAHELETSPETCNCVAASGNGQLLAAAFGKNVRIYASNPSGFHQLAEVEADFATKESGVLSMAFL-DRNNGGSDGSRETDGGVMLMATGGEDGVLRVWELHADARTGGGDGREGERPPSLSVRMVHACKGHEKPVTCVRFHPSGALMLTASKDGTCRLWDCERGSEAALLPTTSGLPPTASIAKAPVIMCRSCCFSPDRPDAIFSVQSEGRGNAYVTEWRYSVR----------PDDDAPGGRGVACEVKPVKVSLVSPHPATSLSVRSDGARLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGLGFATREVGAALGGYDLLAGSADYKISLFKSQGSATKLALRQMMVLLWSLVV-------FVFKAISWLVRTALTLTLTVIPMMGLVALVLAVVYRPEELAAAVRVLIAQEENLGLEADPDSEPPV 476
BLAST of mRNA_A-nodosum_M_contig1020.18.1 vs. uniprot
Match: D7G743_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G743_ECTSI) HSP 1 Score: 463 bits (1192), Expect = 7.990e-154 Identity = 255/414 (61.59%), Postives = 304/414 (73.43%), Query Frame = 3
Query: 297 MYQPPIVSYPVFSVKWSKATDADGVTTPAVVAAGGGGAGKTGVGNKISLIAFKRGAKTPSHDIAFELETSPETSNYVAASENGQLIAAAFGKTVRVFSCNPSGFHKLHDLEADFAEKESGINSMEFSGDASHEGTDDARD---GVRL-ATGGEDGVLRVWDVSA----------AESERR-CLSDLQMFECKGHTKPITCVVFHAAGDMLLTASKDGTCRLWDWRRGVEMALFPTASGLPSSVAT---PKVICRSCCFSPSKPDAVFTLQSGLRGSAYVTQWRYAQAATGVETPVAGPEGHGPGPGGERFTVGAVHVKRVSPHPATSMSVRTDGRRLAVANVEGTVVVYRLPGLAKVMEYRAHDLPVTGMEFASEQTGVALKGYDLLAGSADYKVTLLKSQGS--AISVMFRQF 1478
MYQPPIV++PVFSV WS++TD++G ++PAV+AAGGGGAG TGVGNKIS IAFK GA+ PSH IA ELETSPET N VAAS NGQL+AAAFGK VR+++ NPSGFH+L ++EADFA KESG+ SM F D ++ G D +R+ GV L ATGGEDGVLRVW++ A E ER LS + CKGH KP+TCV FH +G ++LTASKDGTCRLWD RG E AL PT SGLP + +T P ++CRSCCFSP KPDA+F++QSG RG+AYVT+WRY+ P+ PG G V V V VSPHPATS+SVR+DG RLAV NVEGTV+VYRLPG AKVMEY AHDLPVTG+ FAS + G AL GYDLLAGSADYK++L KSQG ++ FR F
Sbjct: 1 MYQPPIVNFPVFSVVWSESTDSNGASSPAVLAAGGGGAGNTGVGNKISSIAFKGGAQQPSHAIAHELETSPETCNCVAASGNGQLLAAAFGKNVRIYASNPSGFHQLAEVEADFATKESGVLSMAFL-DRNNGGRDGSREPDGGVTLLATGGEDGVLRVWELHADARTAGSGDGREGERPPSLSVHMVHACKGHEKPVTCVRFHPSGALVLTASKDGTCRLWDCERGSEAALLPTTSGLPPTASTAKAPVIMCRSCCFSPDKPDAIFSVQSGGRGNAYVTEWRYSVR----------PDDDAPGGRGVACEVKPVKVSLVSPHPATSLSVRSDGARLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGLGFASREVGAALGGYDLLAGSADYKISLFKSQGDKPVLAATFRAF 403
BLAST of mRNA_A-nodosum_M_contig1020.18.1 vs. uniprot
Match: A0A7S2AI78_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI78_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.740e-33 Identity = 127/402 (31.59%), Postives = 186/402 (46.27%), Query Frame = 3
Query: 315 VSYPVFSVKWSKATDADGVTTPAVVAAGGGGAGKTGVGNKISLIAFKRGAKTPSHDIA--FELETSPETSNYVAASENGQLIAAAF-GKTVRVFSCNPSGFHKL----HDLEADFAEKESGINSMEFSGDASHEGTDDARDGVRLATGGEDGVLRVWDV------------SAAESERRCLSDLQM---FECKGHTKPITCVVFHAAGDMLLTASKDGTCRLWDWRRGVEMALFPTASGLPSSVA---TPKVICRSCCFSPSKPDAVFTLQSGLRGSAYVTQWRYAQAATGVETPVAGPEGHGPGPGGERFTVGAVHVKRVSPHPATSMSVRTDGRRLAVANVEGTVVVYRLPGLAKVMEYRAHDLPVTGMEFA-SEQTGVALKGYDLLAGSADYKVTLLKS 1442
V PVF+VKW + GV P ++ GGGG+ K+G+ N+ L+A K D+ ++ + A +NG IAA F G V ++ KL D E D A K++ ++ + F D + + R+A GE+GV+RVW + SA SE + S L++ E KGH KPI + F+ +G + +ASKDGTCR+WD +G + P A G+P+++ T V+CR C FSP VFT+Q RG +YVT+W +E VG + P +++R+DG A +V G +V++ L + H L VTG+ F S G A +DLL GSAD V L S
Sbjct: 11 VPSPVFNVKW---IERKGV--PHMLYCGGGGSAKSGIKNE--LVAKKMVTTKDGTDLKPLASVDCGERLCLSLDADKNGTFIAAGFYGGNVAIYGFRADD--KLAAVSDDFEGDKAVKDAAVDCVCF---------DPSENAARIAAAGEEGVVRVWAIEGKDEVMTSLADSADASEDKSSSLLKISKPLELKGHRKPIESICFNPSGLRVCSASKDGTCRIWDAVKGDCLHELPAADGIPATIVKKMTYNVMCRVCAFSPDGAK-VFTVQGACRGDSYVTRWDLTDDKVNLEK------------------VGKLSTGT----PIKCLAIRSDGLFAAAGDVTGNIVLFDTASLKTIKSEPLHQLTVTGLSFRPSASEGDA---FDLLTGSADKTVMLASS 368
BLAST of mRNA_A-nodosum_M_contig1020.18.1 vs. uniprot
Match: A0A485KKL2_9STRA (Aste57867_8575 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKL2_9STRA) HSP 1 Score: 119 bits (298), Expect = 5.360e-25 Identity = 116/438 (26.48%), Postives = 180/438 (41.10%), Query Frame = 3
Query: 315 VSYPVFSVKWSKATDADGVTTPAVVAAGGGGAGKTGVGNKISLIAFKR---GAKTPSHDIAFELETSPETSNYVAASENGQLIAAAFGKTVRVFSCNPSGFHK---LHDLEADFAEKESGINSMEFSGDASHEGTDDARDGVRLATGGEDGVLRVWDV---SAAESE---------------RRCLSDLQMFECKGHTKPITCVVFHAAGDMLLTASKDGTCRLWD--------WRRGVEMALFPTASGLPSSVATP--KVICRSCCFSPSKPD--AVFTLQSGLRGSAYVTQWRYAQAATGVETPVAGPEGHGPGPGGERFTVGAVHVKRVSPHPATSMSVRTDGRRLAVANVEGTVVVYRLPGLAKVMEYRAHDLPVTGMEF-------ASEQ--TGVALKGYD---LLAGSADYKVTLLKSQGSAISVMFRQFLA 1484
+ YP+F + W + D P V AGGGGA K+G+ N ++L P D+ E++T + + VA +L+A G V+ K + D + DFA+++S N ++FS DG +LATGGEDG++R+W + S E+E R+ +GH I + +HA G+ LL+ +KDG C LW W++ + L + AT K + R C F + D ++ TLQ+ RGS+Y+T+W G + V S+ + +A + +G V+VYR L V AH LP TG+ F +SE T L+ D ++ SADY + L+ + + F FLA
Sbjct: 12 IKYPIFGIDWQR----DRRGQPLVAIAGGGGAAKSGIKNCMTLARVPPPVDATSKPLLDVVMEIDTGEQLISGVAIGSKDELLALTMGNKTAVYRVTDGPKGKAIFVTDFQTDFAKEDSYQNVVKFS-----------PDGTQLATGGEDGIVRIWTLTIPSTDENEDDEDGDQADLDDAAYRKAFRVSAPIVLEGHNGCINGLSWHAMGNKLLSCAKDGQCILWSQTKKPPYTWKKAATLGLAGELALQKEDKATNRGKFVYRGCQFEVADDDDASIVTLQTPARGSSYLTKWSVDVDKNGKAV--------------------VEELSSVRLKDTIICSIAISDKYIACGSSDGQVLVYRFETLTHVKTTTAHYLPSTGIAFFPPLSSDSSEDADTSNGLEFADDITFISASADYSLYLVSGMQPSRVIYFLIFLA 414
BLAST of mRNA_A-nodosum_M_contig1020.18.1 vs. uniprot
Match: A0A067CDC6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CDC6_SAPPC) HSP 1 Score: 108 bits (270), Expect = 1.550e-21 Identity = 117/417 (28.06%), Postives = 189/417 (45.32%), Query Frame = 3
Query: 297 MYQPPIVS--YPVFSVKWSKATDADGVTTPAVVAAGGGGAGKTGVGNKISLIAFKRGAKT---PSHDIAFELETSPETSNYVAASENGQLIAAAFG-KTV--RVFSCNPSGFHKLHDLEADFAEKESGINSMEFSGDASHEGTDDARDGVRLATGGEDGVLRVWDVSAAESERRCLSDLQMFEC-------KGHTKPITCVVFHAAGDMLLTASKDGTCRLWDWRRGVEMALFPTAS-GLPSSVATPKV---------ICRSCCFSPSKPDAVFTLQSGLRGSAYVTQWRYAQAATGVETPVAGPEGHGPGPGGERFT-VGAVHVKRVSPHPATSMSVRTDGRRLAVANVEGTVVVYRLPGLAKVMEYRAHDLPVTGMEFA-------SEQTGVALKGYD----LLAGSADYKVTLL 1436
M + IVS YPVF + W + D D V+ A+ AGGGG+ K+G+ N ++L P+ E++T + + V+ G L+A G KTV RV + + + + + DFA+ +S + + FS DG +LATGGEDG++RVW ++ + + + + F+ GH+ I+ + +HA LL+ +KDG C LW + T GL +A K+ I R+C F D + TLQ+ RGS+Y+T+W A GG+ F V +V +K V SM++ R +A + +G ++++ L + AH LP TG+ F S ++ Y+ +L+GSADY + L+
Sbjct: 1 MTEGKIVSLKYPVFGLDWQR--DPDDVSFVAI--AGGGGSAKSGIKNCVTLARLPHALDASIKPTLVPFHEIDTGDDLVSGVSIGTKGGLVALTMGNKTVIYRVRHGSKTTSTYVTEFQTDFAKDDSYQSVLRFS-----------PDGTKLATGGEDGIVRVWQLTLPDDDSNDETFAKKFKATEIAKLDNGHSGCISGLSWHATSTKLLSCAKDGQCILWALTDKKKKTWTKTGKLGLAGELALQKLDVKANRGKFIYRACHF---HHDEIVTLQTPARGSSYLTKWAAAD-------------------GGKLFLEVASVPIKDVI---VCSMAINL--RYIACGSSDGQLLLFTYDALRLLKTISAHYLPSTGLAFLPPMLLDPSAHEDDRIREYEDDMTVLSGSADYSLYLV 375
BLAST of mRNA_A-nodosum_M_contig1020.18.1 vs. uniprot
Match: W4FSB6_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FSB6_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.540e-20 Identity = 111/416 (26.68%), Postives = 175/416 (42.07%), Query Frame = 3
Query: 315 VSYPVFSVKWSKATDADGVTTPAVVAAGGGGAGKTGVGNKISLIAFKRGAKT----PSHDIAFELETSPETSNYVAASENGQLIAAAFGKTVRVF----SCNPSGFHKLHDLEADFAEKESGINSMEFSGDASHEGTDDARDGVRLATGGEDGVLRVWDVSAAESE---------RRCLSDLQMFECKGHTKPITCVVFHAAGDMLLTASKDGTCRLWD-----WRRGVEMALFPTASGLPSSVATPK--VICRSCCFSPSK------------PDAVFTLQSGLRGSAYVTQWRYAQAATGVETPVAGPEGHGPGPGGERFTVGAVHVKRVSPHPATSMSVRTDGRRLAVANVEGTVVVYRLPGLAKVMEYRAHDLPVTGMEF---ASEQTGVALKGYD---LLAGSADYKVTLL 1436
+ YP+F + W + DA G P V AGGGGA K+G+ N ++L T PS ++T + + VA G LIA G ++ P+ + + DFA +S N+++FS DG +ATGGEDGV+R+W ++ S+ R+ GH I + +HA+G +++ +KDG C +W W++ + L T K I R C F P + + T+Q+ RGS+Y+T+W G T E T AV V S+ + +A + +G V+++R+ LA + + AH LP TG+ F A++ T L D L++ SADY V ++
Sbjct: 10 IKYPIFGIDWKR--DAQG--KPFVAIAGGGGAVKSGIKNCVTLARVPPPKLTSRAPPSLAPYLIIDTVDDLVSGVAIGSKGGLIALTMGSKTAIYRVTSGATPTASFVVA-FQTDFAATDSYQNAVKFS-----------PDGGTIATGGEDGVVRLWTLTIPPSKSEVDVDNKYRKSFKVSAPVLLNGHNGCINGLSWHASGTKVVSCAKDGQCIVWTRVESTWKKAATLGLAGELDVQKPDKPTNKGNFIYRGCAFVPRRFPLHASKKXXXXXXEIVTVQTPARGSSYLTKWSCVVDDQGKGTI-------------EELTSIAVKDTIVC-------SLAVSAKYVATGSSDGQVLIHRVDTLAHLKTFAAHFLPSTGLAFFPFAADATRDPLDFIDDLSLMSASADYSVFVI 389
BLAST of mRNA_A-nodosum_M_contig1020.18.1 vs. uniprot
Match: W4FQG8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQG8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.970e-15 Identity = 80/294 (27.21%), Postives = 126/294 (42.86%), Query Frame = 3
Query: 315 VSYPVFSVKWSKATDADGVTTPAVVAAGGGGAGKTGVGNKISLIAFKRGAKT----PSHDIAFELETSPETSNYVAASENGQLIAAAFGKTVRVF----SCNPSGFHKLHDLEADFAEKESGINSMEFSGDASHEGTDDARDGVRLATGGEDGVLRVWDVSAAESE---------RRCLSDLQMFECKGHTKPITCVVFHAAGDMLLTASKDGTCRLWD-----WRRGVEMALFPTASGLPSSVATPK--VICRSCCFSPSK------------PDAVFTLQSGLRGSAYVTQW 1088
+ YP+F + W + DA G P V AGGGGA K+G+ N ++L T PS ++T + + VA G LIA G ++ P+ + + DFA +S N+++FS DG +ATGGEDGV+R+W ++ S+ R+ GH I + +HA+G +++ +KDG C +W W++ + L T K I R C F P + + T+Q+ RGS+Y+T+W
Sbjct: 10 IKYPIFGIDWKR--DAQG--KPFVAIAGGGGAVKSGIKNCVTLARVPPPKLTSRAPPSLAPYLIIDTVDDLVSGVAIGSKGGLIALTMGSKTAIYRVTSGATPTASFVVA-FQTDFAATDSYQNAVKFS-----------PDGGTIATGGEDGVVRLWTLTIPPSKSEVDVDNKYRKSFKVSAPVLLNGHNGCINGLSWHASGTKVVSCAKDGQCIVWTRVESTWKKAATLGLAGELDVQKPDKPTNKGNFIYRGCAFVPRRFPLHASKKXXXXXXEIVTVQTPARGSSYLTKW 287
BLAST of mRNA_A-nodosum_M_contig1020.18.1 vs. uniprot
Match: A0A1V9ZEL2_9STRA (60S ribosomal protein L24 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEL2_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.070e-13 Identity = 75/303 (24.75%), Postives = 130/303 (42.90%), Query Frame = 3
Query: 615 LHDLEADFAEKESGINSMEFSGDASHEGTDDARDGVRLATGGEDGVLRVW-----DVSAAESERRCLSDLQMFECKGHTKPITCVVFHAAGDMLLTASKDGTCRLWD---------WRRGVEMALFPTASGLPSSVATP--KVICRSCCFSPSKPD--AVFTLQSGLRGSAYVTQWRYAQAATGVETPVAGPEGHGPGPGGERFTVGAVHVKRVSPHPATSMSVRTDGRRLAVANVEGTVVVYRLPGLAKVMEYRAHDLPVTGMEFA-----------SEQTGVALKGYDLLAGSADYKVTLL 1436
+ + E DFA +S + ++FS +G+ LATGG+DG +R+W D S +S ++ ++ GHT I+ + +H++ LL+ +KDGTC LW W++ ++ L S + K I R+C F D + TLQ+ RGS+Y+T+W+Y+ + + + S+ T+ R +A + +G + +Y L + AH LP TG+ F +++ G +L+GSADY + L+
Sbjct: 5 ITEFETDFAPDDSHQSVVKFS-----------PNGLYLATGGQDGKVRIWQIVVPDESTEDSFKKAFKVNEVATLDGHTGCISGISWHSSNTKLLSCAKDGTCFLWSLDKKGKKTQWKKCGKLGLAGELSIQTQQKQSNRGKFIYRACHFHELSSDHFELLTLQTPARGSSYLTKWQYSSDTKSI-----------------------TELTSLVIKDTILCSMATNLRYIACGSSDGQLFLYSYRELLAIKTIAAHYLPSTGIAFLPRSQSSNNVEDNDKDGEYHDELTILSGSADYSIYLI 273
BLAST of mRNA_A-nodosum_M_contig1020.18.1 vs. uniprot
Match: A0A2R6WPP9_MARPO (ANAPC4_WD40 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WPP9_MARPO) HSP 1 Score: 75.5 bits (184), Expect = 1.050e-10 Identity = 88/328 (26.83%), Postives = 132/328 (40.24%), Query Frame = 3
Query: 414 KTGVGNKISLIAFKRGAKTPSHDIAFELETSPETSNYVAASENGQLIAAAFGKTVRVFSCNPSGFHKLHDLEA------DFAEKESGINSMEFSGDASHEGTDDARDGVRLATGGEDGVLRVWDVSAAESERRCLSDLQMFECKGHTKPITCVVFHAAGDMLLTASKDGTCRLWDWRRGVEMALFPTASGLPSSVATPKVICRSCCFSP--SKPDAVFTLQSGLRGSAYV---TQWRYAQAATGVETPVAGPEGHGPGPGGERFTVGAVHVKRVSPHPATSMSVRTDGRRLAVANVEGTVVVYRLPGLAKVMEYR-AHDLPVTGMEFA 1361
K+GV NK+ L+A A + + L T + +A I + K R+ N KL + D E+ N + FSGD G RLATGGEDG LRV++ + E L M + HT + + F G +L++ G CR+WD + AS + S A+ C FS +KP T++ G +G + T W+ + + KR+S +P ++ ++ DGR LA+ N EG V V L VM+ + AH + VT MEF+
Sbjct: 59 KSGVKNKL-LLAHYDFASDMLSEAVYTLSTDDDPPYRLAVHPGSNKIVCSISKDCRLLELNAEEDLKLEVSKRVVQPLQDIGEQ----NCLVFSGD-----------GTRLATGGEDGHLRVFEWPSLE--------LVMDQAGAHTA-VKDIDFSLDGSLLVSTGDAGPCRVWDLSK---------ASAVTSLSASKGANLGLCRFSRDGTKPFLFITMREGSKGVISIWNSTTWKMSTS------------------------------KRLSEYPISAFAISPDGRFLAIGNSEGDVKVLNANNLGVVMQVKSAHMVFVTSMEFS 322
BLAST of mRNA_A-nodosum_M_contig1020.18.1 vs. uniprot
Match: A0A6T5VQI7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A6T5VQI7_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 6.610e-10 Identity = 65/248 (26.21%), Postives = 109/248 (43.95%), Query Frame = 3
Query: 726 LATGGEDGVLRVWDVSAAESERRCLSDLQMFECKGHTKPITCVVFHAAGDMLLTASKDGTCRLWDWRRGVEMALFPTASGLPSSVATPK--VICRSCCFSPSKPDAVFTLQSGLRGSAYVTQWRYAQAATGVETPVAGPEGHGPGPGGERFTVG--AVHVKRVSPHPATSMSVRTDGRRLAVANVEGTVVVYRLPGLAKVMEYRAHDLPVTGMEFA------SEQTGVALKGYDLLAGSADYKVTLLK 1439
+ T + G +++W+++ + + Q++ H I + H +++++SKDG+C+LW+ G + P A L + PK + CR CFS ++++QSG RGS Y+ R T + TV + V VS P T + LA+ + +G++VV L KV + HDLPVTG+ FA E+ + SADYK+T ++
Sbjct: 72 IITAEDFGNIKLWNLTQLNDDEWKID--QVYSITAHKAAIMDLSIHPLEPIVVSSSKDGSCKLWNIDNGELINEIPNARNLMKK-SDPKLSIECRGSCFSIDGLH-LYSIQSGKRGSTYLFD-RLITIQRDNST--------------SKLTVDIKVLKVIEVSRVPCTKLKTNDKTSHLAIGSSDGSIVVVTTSNLKKVYSKQFHDLPVTGLGFAPIILADEEEVDCIVNSC-----SADYKLTTIR 295 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1020.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1020.18.1 >prot_A-nodosum_M_contig1020.18.1 ID=prot_A-nodosum_M_contig1020.18.1|Name=mRNA_A-nodosum_M_contig1020.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=478bp MYQPPIVSYPVFSVKWSKATDADGVTTPAVVAAGGGGAGKTGVGNKISLIback to top mRNA from alignment at A-nodosum_M_contig1020:223735..234254- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1020.18.1 ID=mRNA_A-nodosum_M_contig1020.18.1|Name=mRNA_A-nodosum_M_contig1020.18.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10520bp|location=Sequence derived from alignment at A-nodosum_M_contig1020:223735..234254- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1020:223735..234254- >mRNA_A-nodosum_M_contig1020.18.1 ID=mRNA_A-nodosum_M_contig1020.18.1|Name=mRNA_A-nodosum_M_contig1020.18.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1434bp|location=Sequence derived from alignment at A-nodosum_M_contig1020:223735..234254- (Ascophyllum nodosum dioecious)back to top |