prot_A-nodosum_M_contig102.51.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig102.51.1
Unique Nameprot_A-nodosum_M_contig102.51.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length318
Homology
BLAST of mRNA_A-nodosum_M_contig102.51.1 vs. uniprot
Match: W2YNB0_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2YNB0_PHYPR)

HSP 1 Score: 118 bits (295), Expect = 2.840e-27
Identity = 66/193 (34.20%), Postives = 111/193 (57.51%), Query Frame = 0
Query:   12 TRNNLTEKQRHRLVEHLLKGSQKGKLARGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAK----EALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFMKPYLTDAGKERRLEWAKRWVREGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELP 200
            TR NLT  +R  ++ +LL  S +    +G +K     ++C   Q++ +W+R  + IQ G  ++  +GR G SGR+     + +    EA++ IP+++R  +R LAS LG+ ++TL+        R+ S  +KP LTD  +  R+E+A  +V  G G   + ++M + V +DEKWF++ K  QR+YLG  EE+P
Sbjct:   11 TRKNLTPAERAEVIAYLLSVSTELSPPQGAIKACTTKYACGDAQISRLWRRSVKAIQAGAPIDYESGRKGRSGRKSRLTSEFRVQLNEAIELIPLEDRADIRTLASSLGIAKSTLHDYYQAGAFRSHSAHVKPLLTDKQRAARVEFAAGFVHRGFGERLTFNSMMDFVHLDEKWFFLKKDKQRFYLGENEEVP 203          
BLAST of mRNA_A-nodosum_M_contig102.51.1 vs. uniprot
Match: A0A1R3HQ96_9ROSI (Transposase, Tc1-like protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3HQ96_9ROSI)

HSP 1 Score: 118 bits (295), Expect = 3.370e-27
Identity = 70/189 (37.04%), Postives = 114/189 (60.32%), Query Frame = 0
Query:   15 NLTEKQRHRLVEHLLKGSQKGKLARGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFMKPYLTDAGKERRLEWAKRWVREGHGGARSI--DNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPV 201
            NLT +QR  + E LLK S+ G L++G L   A  FS S + +  +WK+ K  ++NG  VN+ +   G+ GR+ + ++  K  +  IP++ RT +R++A  L M+++T++R + +  +RA S  +KP LTD  K+ RLE+    +   + G  +I  D M N V +DEKWF+M ++ +RYYL   E+ PV
Sbjct:   17 NLTNQQRQTIYEMLLKQSKDGVLSKGSLTSLATMFSVSPKTIGRIWKQAKLCMENGLIVNVSSKLTGNVGRKKILIDPRK--VSEIPLRRRTNIRSIAKALNMSKSTVHRRVKEGFIRAHSNAVKPDLTDENKKTRLEFCLSKLDLTNAGINTIPFDGMFNQVHIDEKWFFMTRESERYYLLPEEDEPV 203          
BLAST of mRNA_A-nodosum_M_contig102.51.1 vs. uniprot
Match: W2PWX2_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PWX2_PHYPN)

HSP 1 Score: 108 bits (271), Expect = 9.180e-24
Identity = 68/201 (33.83%), Postives = 110/201 (54.73%), Query Frame = 0
Query:    6 SAAPKATRN--NLTEKQRHRLVEHLLKGSQKGKLARGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKE----ALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFMKPYLTDAGKERRLEWAKRWVREGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELP 200
            ++AP  TR   NLT  +R  ++  LLK S + +   G +   +  + CS +Q+  +W+R  Q I++G  +N  + R G SGR+    E+ +     A++  P + RT +R LAS LG+ +++L+        R  +  +KP L+D  +  RL++A  +V  G    R  D+  N V +DEKWFY+ K+ QR+YLG  EE P
Sbjct:    3 TSAPMNTRKRKNLTPSERAEVIAFLLKVSIELEPPIGAIAACSTKYECSDDQIARLWRRALQDIKSGNAINYDSDRKGKSGRKTRLTEEFRHDLSHAIELTPFEERTDIRTLASSLGIAKSSLHDYFLAGAFRRHTTRLKPLLSDQHRADRLKFAYGFVHRGPRNTRVFDSFMNYVHLDEKWFYLKKENQRFYLGTHEEPP 203          
BLAST of mRNA_A-nodosum_M_contig102.51.1 vs. uniprot
Match: Q7X8C7_ORYSJ (OSJNBa0082E08.4 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7X8C7_ORYSJ)

HSP 1 Score: 110 bits (276), Expect = 1.330e-23
Identity = 66/174 (37.93%), Postives = 105/174 (60.34%), Query Frame = 0
Query:   28 LLKGSQKGKLARGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFMKPYLTDAGKERRLEWAKRWV-REGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELP 200
            LL  S+ GKL + D    AA F    + V  +WKR K Q+ N   V + + + G  GR+ + V+   EAL++IP+K RTT+  ++++L M+++ + R L K  LR  S  +KPYLT+A K+ RL+W    + R+ HGG R  D   + V++DEKWFY+ ++ ++YYL   ++ P
Sbjct:   13 LLARSKNGKLGKKDTSIVAAQFGLGIQSVQRLWKRGKIQLANSIPVVVSSLKKGRVGRKKIPVDL--EALRSIPLKERTTIEDVSAKLNMSKSKIQRYLRKGFLRRHSSSIKPYLTEANKKSRLKWCVDMIKRDLHGGPRFKD-FFDFVLIDEKWFYLSQKSEKYYLLPEQDDP 183          
BLAST of mRNA_A-nodosum_M_contig102.51.1 vs. uniprot
Match: A0A834HDF7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HDF7_RHOSS)

HSP 1 Score: 110 bits (274), Expect = 1.520e-23
Identity = 69/204 (33.82%), Postives = 117/204 (57.35%), Query Frame = 0
Query:    1 MPGSGSAAPKATRNNLTEKQRHRLVEHLLKGSQKGKLARGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGV--DVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFMKPYLTDAGKERRLEWAKRWVREGHGGARSI-DNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPV 201
            +P S S+A   ++  LT +QR ++ E LLK S++GKL RG + + A  FS + + V  +WKR    ++NG  V++     G  GR+ +  DV K  E    +P++ RT++R+LA  + + +TTL R + +  +R  +  +KP+LT+ GK+ RL +    +         +  NM+N V +DEKWF++ ++ +RYYL   E  P+
Sbjct:    3 IPMSHSSAHPISQKKLTNQQRQQIFEALLKQSERGKLKRGCIPEVAKLFSVNAKSVRRIWKRAVFCMENGVAVDVSRRLHGRVGRKRIHFDVNKVSE----VPLRRRTSIRSLAKAVTVPQTTLFRRIKEGDIRPHTIAVKPHLTEEGKKARLRFCFSMLEPSSLANDPVFKNMYNYVHIDEKWFFLSREVERYYLLPREREPL 202          
BLAST of mRNA_A-nodosum_M_contig102.51.1 vs. uniprot
Match: W4H8S5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8S5_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.760e-23
Identity = 67/204 (32.84%), Postives = 115/204 (56.37%), Query Frame = 0
Query:    1 MPGSGSAAPKATRNNLTEKQRHRLVEHLLKGSQKGKLARGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDV-NLRNGRFGHSGRRGVDV-EKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLG-LRAASRFMKPYLTDAGKERRLEWAKRWVREGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPV 201
            +PG+  A     R NLT +QR  + E LL+ S  G L  G L   A  F C +  ++ VW R +  ++NG DV ++ +   G+ GR+     E+ ++A+KT+P   R T+R++A +  + ++T+ R++ +   L+A S ++KP LT+   + RL++A  +VR    G     +MH  V VDEKWFY+ K  + +Y+   E++ +
Sbjct:   18 LPGATRA-----RENLTSQQRRAIYETLLEQSTDGGLPYGALHDLAVKFRCHWRTISRVWTRGRASLRNGNDVADVASRLQGNVGRKKTRTSEEIEQAIKTVPHFARQTLRSVAHQSNIPKSTIIRHIRETKRLKARSSYVKPLLTEDNLKTRLKFAMNFVRPSASGTHIFASMHQYVHVDEKWFYLTKVKRNFYVYDDEDIAL 216          
BLAST of mRNA_A-nodosum_M_contig102.51.1 vs. uniprot
Match: UPI0007EF543B (uncharacterized protein LOC108212812 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF543B)

HSP 1 Score: 108 bits (271), Expect = 7.360e-23
Identity = 61/188 (32.45%), Postives = 110/188 (58.51%), Query Frame = 0
Query:   15 NLTEKQRHRLVEHLLKGSQKGKLARGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFMKPYLTDAGKERRLEWAKRWV-REGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPV 201
            NL+ + R R+ + LL  S  GKL RG +++ +A FS S   V  +WK+  Q   NG  +N+ + R  + GR+ ++++   E +K +P+  RT++ +LA  + ++++TL+RN     LR  S  +KPYL D+ K+ R +++   + +          +M++++ +DEKWFY+ K+ ++YYL   E  PV
Sbjct:   91 NLSNEDRRRIYQTLLTKSVDGKLRRGTIREVSAIFSISSRTVARIWKQATQSSNNGA-INVSHKRSKNCGRKRIEIDP--EQIKKVPLSRRTSLESLAYAINVSKSTLHRNFKSGRLRRHSNHVKPYLKDSNKKARAQFSLSMIDKSSLPHDPHFKDMNDMIHIDEKWFYISKKAEKYYLLPEESDPV 275          
BLAST of mRNA_A-nodosum_M_contig102.51.1 vs. uniprot
Match: UPI001036D506 (uncharacterized protein LOC114270614 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036D506)

HSP 1 Score: 105 bits (261), Expect = 9.110e-23
Identity = 66/190 (34.74%), Postives = 106/190 (55.79%), Query Frame = 0
Query:   12 TRNNLTEKQRHRLVEHLLKGSQKGKLARGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFMKPYLTDAGKERRLEWAKRWVREGH-GGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELP 200
            T+ NLT   R  + E LL  S+ GKL RG   K  A FS   + V  +W+R    ++NG  VN+ + +  +SGR+ V +   K A   IP++ RT +R+L+  L + ++T++R + +  +R  S  +KPYL++  K  RL +    +      G    ++M++ V +DEKWFY+ K+ +RYYL   EE P
Sbjct:   24 TKKNLTNHLRQSIFETLLIRSKDGKLKRGCQTKVVAKFSVHVKTVRRIWQRGIACMENGLVVNV-SSKLTNSGRKRVQLNFGKVA--EIPLRRRTNIRSLSKTLNLPKSTVHRRIKEGKIRPHSNALKPYLSEENKRARLRFCLSMLEPNSLQGQPMFNSMYDYVHIDEKWFYISKEAERYYLLLEEEEP 210          
BLAST of mRNA_A-nodosum_M_contig102.51.1 vs. uniprot
Match: A0A6A4ZHN9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZHN9_9STRA)

HSP 1 Score: 105 bits (261), Expect = 9.850e-23
Identity = 67/198 (33.84%), Postives = 109/198 (55.05%), Query Frame = 0
Query:    9 PKATRNNLTEKQRHRLVEHLLKGSQKGKLARGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRF-GHSGRR-GVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNR---NLPKLGLRAASRFMKPYLTDAGKERRLEWAKRWVREGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPV 201
            P     NLT+ +R  + E LL  S  G L +G     A DF CS   V  VW R KQ ++ G  V + + +  G+ G +  +  +  + A+KT+P ++R T+R +++   + ++TL+R   N P+   R++  ++KP LTD  K  R+++ K ++R          NMHN+V VDEKWFY+ K  +R+Y+   EEL +
Sbjct:    5 PSRRPRNLTDVERRVVYERLLAASIGGILPQGATADVARDFGCSTRTVARVWVRGKQSLREGSLVAVVDAKMRGNCGPKFKLSDDDIEVAVKTVPHEDRQTLRTMSAACQVAKSTLHRRMKNNPRFNARSS--YVKPLLTDKHKATRVDFVKSFLRPALNSYHVFANMHNIVHVDEKWFYLSKIKRRFYVFHDEELAL 200          
BLAST of mRNA_A-nodosum_M_contig102.51.1 vs. uniprot
Match: UPI000BBEA021 (uncharacterized protein LOC111210763 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBEA021)

HSP 1 Score: 103 bits (257), Expect = 1.470e-22
Identity = 70/207 (33.82%), Postives = 113/207 (54.59%), Query Frame = 0
Query:    9 PKATRNNLTEKQRHRLVEHLLKGSQKGKLARGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFMKPYLTDAGKERRLEWAKRWV-REGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKAAQITHPEGHV 214
            PK TRN L+ ++RH +   LL+ S  GKLA    +  +  FS S   V  +WKR K    +G  VN+ + R G+ GR+ + +E  + A   +P+  RTT+R+++  L ++ TTL R   +  +R  +  +KP L +A    RL++    + ++         +M+N+V +DEKWFYM K+ ++YYL   EE P H+  Q  +  G V
Sbjct:   16 PKKTRNFLSNEKRHEIFSALLERSIGGKLANNVTRDVSLQFSVSIATVQRIWKRAKATANSGR-VNVSHRRTGNCGRKRITIEPTQVA--GVPLCRRTTLRSMSMALNVSLTTLFRRKKEGFIRRHTNSIKPLLKEANIRGRLQFCISMLDKDSLPHEPKFVDMYNIVHIDEKWFYMTKKTEKYYLLPIEEEP-HRTCQSKNYIGKV 218          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig102.51.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W2YNB0_PHYPR2.840e-2734.20Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A1R3HQ96_9ROSI3.370e-2737.04Transposase, Tc1-like protein n=1 Tax=Corchorus ol... [more]
W2PWX2_PHYPN9.180e-2433.83Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
Q7X8C7_ORYSJ1.330e-2337.93OSJNBa0082E08.4 protein n=2 Tax=Oryza sativa subsp... [more]
A0A834HDF7_RHOSS1.520e-2333.82Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
W4H8S5_9STRA1.760e-2332.84Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI0007EF543B7.360e-2332.45uncharacterized protein LOC108212812 n=1 Tax=Daucu... [more]
UPI001036D5069.110e-2334.74uncharacterized protein LOC114270614 n=1 Tax=Camel... [more]
A0A6A4ZHN9_9STRA9.850e-2333.84Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
UPI000BBEA0211.470e-2233.82uncharacterized protein LOC111210763 n=1 Tax=Brass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 133..221
e-value: 2.0E-9
score: 39.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..317
NoneNo IPR availablePANTHERPTHR33889OS04G0681850 PROTEINcoord: 10..156
NoneNo IPR availablePANTHERPTHR33889:SF7OS04G0681850 PROTEINcoord: 10..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig102contigA-nodosum_M_contig102:242516..243469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig102.51.1mRNA_A-nodosum_M_contig102.51.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig102 242138..243500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig102.51.1 ID=prot_A-nodosum_M_contig102.51.1|Name=mRNA_A-nodosum_M_contig102.51.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=318bp
MPGSGSAAPKATRNNLTEKQRHRLVEHLLKGSQKGKLARGDLKKAAADFS
CSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTI
PMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFMKPYLTDAGKERR
LEWAKRWVREGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELP
VHKAAQITHPEGHVSGSRRAAALGHRRQPQLRRENRHLPVHEAGACPTQQ
QEQGCRHHGDEDGRGDESGLQAEDAGRGVSRHQAHVAGWPIARQRATGQR
AGPQDQRRPGHRGGGHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf