mRNA_A-nodosum_M_contig1015.17.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1015.17.1
Unique NamemRNA_A-nodosum_M_contig1015.17.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1015.17.1 vs. uniprot
Match: A0A6H5K7K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K5_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 2.350e-112
Identity = 167/231 (72.29%), Postives = 195/231 (84.42%), Query Frame = 2
Query:  107 AAPLERTQAPRASASTAEAKTTQYTLDKKPIGGPLTPISSNILVKVRSKDDTSDGGIILPEKAKEKPTEGVVIAMGPGRTHPETGMPVPSPCAVGDKVLYGKYDGTAVDYMGEDHQFVRGQDILFVYAGERMQPDTIKMIRDEILVKVDPEATQSKSGLLLGNKEEDTGSGPSTGEVVAVGPGRTADTGDVVPMTVQTGDLIKFRDFAGSPVKMQGIDYRVMKIEEVLAKW 799
            AAP     +   S STAE +T QY LDKK IGGPLTPI++ ILVKVRSKD  S GGIILPEKA+ KPTEGVV++MGPG+THPETG+PV  PCAVGDKVLYG++DGTAVDY+G DHQFVR QDILFVY+GERM+P TIKMIRDE+LVKVDPEAT +KSGLLLG KEE+TG G +TGEVVA GPGR++  G++VPM+V TGD +KFR FAGS V +QG+DYRVMK+ EVLAK+
Sbjct:    8 AAPARPPASSLVSMSTAETETAQYLLDKKAIGGPLTPIANYILVKVRSKDVASQGGIILPEKAQVKPTEGVVVSMGPGKTHPETGVPVDMPCAVGDKVLYGEFDGTAVDYVGTDHQFVRDQDILFVYSGERMEPSTIKMIRDELLVKVDPEATTTKSGLLLGQKEENTGEGSTTGEVVATGPGRSSSDGEIVPMSVATGDFVKFRPFAGSEVSLQGVDYRVMKVNEVLAKY 238          
BLAST of mRNA_A-nodosum_M_contig1015.17.1 vs. uniprot
Match: A0A835YMZ7_9STRA (Chaperonin 10-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMZ7_9STRA)

HSP 1 Score: 239 bits (611), Expect = 2.530e-75
Identity = 122/220 (55.45%), Postives = 164/220 (74.55%), Query Frame = 2
Query:  152 TAEAKTTQYTLDKKPIGGPLTPISSNILVKVRSKDDTSDGGIILPEKAKEKPTEGVVIAMGPGRTHPETGMPVPSPCAVGDKVLYGKYDGTAVDYMGEDHQFVRGQDILFVYAGERMQPDTIKMIRDEILVKVDPEATQSKSGLLLGNKEEDTGSGPSTGEVVAVGPGRTADTGDVVPMTVQTGDLIKFRDFAGSPVKMQGID----YRVMKIEEVLAKW 799
            TAEA T +++L  KPIGGPL PIS+ ILV+V+ K  ++ GG+ L EK+ ++PTEG V+A+GPG+ H ETG+ +P PC VGDKVLYGK+DGT ++Y G+DHQF+R  D+LFVY+G+ M P+TIKM+ D+ILV+V+ +  ++ SGL L   +   G  P+ G+V+AVGPGRT   G+ VPMT+Q GDLIKFRDFAGS + M GI     YRVMK E+VL  +
Sbjct:    3 TAEAATAEHSLAGKPIGGPLMPISNAILVRVKDKAASTVGGVQLLEKSVDRPTEGTVVAVGPGKKHQETGVEIPMPCNVGDKVLYGKFDGTKLEYDGKDHQFIRDTDVLFVYSGDAMTPETIKMMGDQILVEVEDKEEKTSSGLFLAADDSGIGKKPTMGKVLAVGPGRTTADGNTVPMTLQPGDLIKFRDFAGSEISM-GIGLRTVYRVMKEEDVLVSY 221          
BLAST of mRNA_A-nodosum_M_contig1015.17.1 vs. uniprot
Match: W7TNB8_9STRA (20 kDa chaperonin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNB8_9STRA)

HSP 1 Score: 197 bits (500), Expect = 3.670e-58
Identity = 102/211 (48.34%), Postives = 139/211 (65.88%), Query Frame = 2
Query:  167 TTQYTLDKKPIGGPLTPISSNILVKVRSKDDTSDGGIILPEKAKEKPTEGVVIAMGPGRTHPETGMPVPSPCAVGDKVLYGKYDGTAVDYMGEDHQFVRGQDILFVYAGERMQPDTIKMIRDEILVKVDPEATQSKSGLLLGNKEEDTGSGPSTGEVVAVGPGRTADTGDVVPMTVQTGDLIKFRDFAGSPVKMQGIDYRVMKIEEVLAKW 799
            T  + LD + I GPL P+++ +LVKV+  +D S GGI+LP++AKEKPTEG V+A GPGR HPET + +P P   G KVLYGK+DG +V Y G  H  +R  DIL  + G  M  D ++ +RD ILVKV     +S  G+LL      T + P+ GEV+ VGPGR A TG+V  + V+ GD +KF+DFAG+ +K+Q  +Y VM   +VLA+W
Sbjct:   45 TRAHNLDGQEIPGPLEPLANVLLVKVKDAEDMSAGGIVLPDQAKEKPTEGEVVAAGPGRQHPETAVLMPMPVKPGSKVLYGKFDGMSVIYDGAPHVLIRDDDILLTWTGSSMTLDAVETVRDRILVKVKKAQEKSAGGILLAPSM--TKARPTEGEVIKVGPGRIASTGEVADVKVKPGDGVKFKDFAGTEIKIQDENYLVMYSVDVLARW 253          
BLAST of mRNA_A-nodosum_M_contig1015.17.1 vs. uniprot
Match: A0A8J2WID0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WID0_9STRA)

HSP 1 Score: 191 bits (484), Expect = 6.210e-56
Identity = 95/210 (45.24%), Postives = 141/210 (67.14%), Query Frame = 2
Query:  176 YTLDKKPIGGPLTPISSNILVKVRSKDDTSDGGIILPEKAKEKPTEGVVIAMGPGRTHPETGMPVPSPCAVGDKVLYGKYDGTAVDYMGEDHQFVRGQDILFVYAGER-MQPDTIKMIRDEILVKVDPEATQSKSGLLLG-NKEEDTGSGPSTGEVVAVGPGRTADTGDVVPMTVQTGDLIKFRDFAGSPVKMQGIDYRVMKIEEVLAKW 799
            YTLD  PIGGPL P+++ ILVK+    D + GG+ LP++AKEKP+ G+V+A G G+ HP+TG+ VP+P   GD+VLYGK+DGT+V Y GEDHQ ++  DIL  +AG+  M    +K + D +LV+V     ++ SG+ L     E T +  ++G VV  G GR A  G  VP+ V+ G+ +KF+D+AG+ +++ G DY V+++ + LAKW
Sbjct:   31 YTLDDAPIGGPLEPVANYILVKIDDGIDATKGGVFLPDQAKEKPSAGIVVAAGAGKAHPDTGVVVPNPVTEGDRVLYGKFDGTSVKYCGEDHQLIKDDDILLSWAGDASMTLGEVKCVADNVLVQVTKVEEETASGIALAAGVSEQTRT--TSGVVVKTGTGRVAADGASVPVPVEVGESVKFKDYAGADIRLDGEDYIVVRVPDCLAKW 238          
BLAST of mRNA_A-nodosum_M_contig1015.17.1 vs. uniprot
Match: K0T1C8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T1C8_THAOC)

HSP 1 Score: 185 bits (469), Expect = 1.170e-53
Identity = 91/206 (44.17%), Postives = 139/206 (67.48%), Query Frame = 2
Query:  182 LDKKPIGGPLTPISSNILVKVRSKDDTSDGGIILPEKAKEKPTEGVVIAMGPGRTHPETGMPVPSPCAVGDKVLYGKYDGTAVDYMGEDHQFVRGQDILFVYAGERMQPDTIKMIRDEILVKVDPEATQSKSGLLLGNKEEDTGSGPSTGEVVAVGPGRTADTGDVVPMTVQTGDLIKFRDFAGSPVKMQGIDYRVMKIEEVLAKW 799
            L+ + I G LTP ++ +LVK+   +D ++GGI+L   AK K TEG VI+ GPG+TH E+G+  P P   GD V+YGKYDGT V+Y G+ H  +R  DIL  + G+++  DT  +I D +LVKVD +  ++ SGLL+    +  G  PSTG VV VGPGR A  G+++ + +  GD++K+RDFAG+ V ++G ++ V+++ ++LAK+
Sbjct:   38 LEGREIEGALTPTNNFVLVKIAPIEDETEGGILLTGSAKIKKTEGTVISAGPGKTHQESGLLFPMPVESGDGVVYGKYDGTEVEYDGDKHTLIRDDDILVKFKGDKLTLDTADVISDNVLVKVDDDGEETASGLLIAASAKKGGK-PSTGTVVKVGPGRMASNGEIMTVDIGVGDMVKYRDFAGNEVTIEGDEFSVVRMTDILAKF 242          
BLAST of mRNA_A-nodosum_M_contig1015.17.1 vs. uniprot
Match: D7FNY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY7_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 6.010e-51
Identity = 83/103 (80.58%), Postives = 94/103 (91.26%), Query Frame = 2
Query:  329 MGPGRTHPETGMPVPSPCAVGDKVLYGKYDGTAVDYMGEDHQFVRGQDILFVYAGERMQPDTIKMIRDEILVKVDPEATQSKSGLLLGNKEEDTGSGPSTGEV 637
            MGPG+THPETG+PV  PCA+GDKVLYG++DGTAVDYMG DHQFVR QDILFVY+GERM+P TIKMIRDE+LVKVDPEAT +KSGLLLG KEE+TG G +TGEV
Sbjct:    1 MGPGKTHPETGVPVDIPCALGDKVLYGEFDGTAVDYMGTDHQFVRDQDILFVYSGERMEPSTIKMIRDELLVKVDPEATTTKSGLLLGQKEENTGEGSTTGEV 103          
BLAST of mRNA_A-nodosum_M_contig1015.17.1 vs. uniprot
Match: A0A835YHA6_9STRA (Chaperonin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHA6_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.060e-50
Identity = 88/208 (42.31%), Postives = 132/208 (63.46%), Query Frame = 2
Query:  176 YTLDKKPIGGPLTPISSNILVKVRSKDDTSDGGIILPEKAKEKPTEGVVIAMGPGRTHPETGMPVPSPCAVGDKVLYGKYDGTAVDYMGEDHQFVRGQDILFVYAGERMQPDTIKMIRDEILVKVDPEATQSKSGLLLGNKEEDTGSGPSTGEVVAVGPGRTADTGDVVPMTVQTGDLIKFRDFAGSPVKMQGIDYRVMKIEEVLAKW 799
            +TLD K I GPL P+S+ ILVK+R     + GGI+LP+++ +KP+EG V+A GPGR+HP T   +P   A G +V+Y KY G  V Y G DH  +   D+L VY GE+     +KMIRD++LVK+     ++ +G+++  +        S G+VVAVGPGRTA  G + P  VQ G+ +KFR++AG  + ++   Y V+++ + L+KW
Sbjct:   54 HTLDDKVIRGPLQPVSNFILVKIRDSASLTTGGIVLPDQSIDKPSEGEVVATGPGRSHPHTAELIPMCVAPGQRVMYSKYSGKKVKYDGLDHTLITDDDLLLVYEGEKPTAANLKMIRDQVLVKITRSEGRTDTGIVISAQTAGKEL-KSEGQVVAVGPGRTASNGQLTPCYVQPGEFVKFREYAGIEITLESESYAVVRMVDCLSKW 260          
BLAST of mRNA_A-nodosum_M_contig1015.17.1 vs. uniprot
Match: A0A1Z5KFF1_FISSO (Chaperonin GroES n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFF1_FISSO)

HSP 1 Score: 174 bits (442), Expect = 1.240e-49
Identity = 87/206 (42.23%), Postives = 136/206 (66.02%), Query Frame = 2
Query:  182 LDKKPIGGPLTPISSNILVKVRSKDDTSDGGIILPEKAKEKPTEGVVIAMGPGRTHPETGMPVPSPCAVGDKVLYGKYDGTAVDYMGEDHQFVRGQDILFVYAGERMQPDTIKMIRDEILVKVDPEATQSKSGLLLGNKEEDTGSGPSTGEVVAVGPGRTADTGDVVPMTVQTGDLIKFRDFAGSPVKMQGIDYRVMKIEEVLAKW 799
            LD + I G + P+++ ILVK     D ++GGI+L  KAK   TEG V A+GPG+TH ++G+ V  P  VG+ V+YGK+DGT +D  G+ H  +R  D+L  + G+++  +++ ++ D +LV VD   + ++ G+LL      T    STGEVV VGPG+ A  G+++ M V  GD+IKFRDFAG+ V+++G +Y V+K+ ++LAK+
Sbjct:   37 LDGRKIKGDVVPLNNFILVKKAPAQDKTEGGILLTGKAKIVKTEGTVQAVGPGKTHQDSGITVQMPVKVGESVVYGKFDGTEIDLDGQPHTLIRDDDVLVKFHGDQLTLESVNVVFDNVLVAVDSSESATEGGILLAKSSSQT-KRASTGEVVKVGPGKMASNGELMTMDVTPGDMIKFRDFAGNEVEIEGKEYSVVKMVDILAKY 241          
BLAST of mRNA_A-nodosum_M_contig1015.17.1 vs. uniprot
Match: B8CCQ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCQ7_THAPS)

HSP 1 Score: 173 bits (438), Expect = 4.770e-49
Identity = 89/206 (43.20%), Postives = 136/206 (66.02%), Query Frame = 2
Query:  182 LDKKPIGGPLTPISSNILVKVRSKDDTSDGGIILPEKAKEKPTEGVVIAMGPGRTHPETGMPVPSPCAVGDKVLYGKYDGTAVDYMGEDHQFVRGQDILFVYAGERMQPDTIKMIRDEILVKVDPEATQSKSGLLLGNKEEDTGSGPSTGEVVAVGPGRTADTGDVVPMTVQTGDLIKFRDFAGSPVKMQGIDYRVMKIEEVLAKW 799
            L+ + I G LTP ++ +LVKV   ++ + GGI+L   AK K TEG VI+ GPG+TH E+G+  P P   G+ V+YGKYDGT + Y G+ H  +R  DIL  + G ++  D + ++ D +LVKV+ +   +  GLL+    +  GS PSTGEVV VGPGR A  G+++ + +  GD +KFRDFAG+ V+++G +Y V+++ ++LAK+
Sbjct:   37 LEGREIDGVLTPTNNFVLVKVAEIEEETAGGILLTGSAKIKKTEGTVISTGPGKTHQESGILFPMPVTPGNGVVYGKYDGTEIVYDGDRHTLIRDDDILVKFDG-KLTLDNVDVVSDNVLVKVNDDQEATSGGLLIAATSK-KGSKPSTGEVVKVGPGRMASNGEIMTVDISVGDEVKFRDFAGNEVQIEGEEYAVVRMTDILAKF 240          
BLAST of mRNA_A-nodosum_M_contig1015.17.1 vs. uniprot
Match: A0A7R9UAA2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAA2_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.190e-48
Identity = 91/230 (39.57%), Postives = 142/230 (61.74%), Query Frame = 2
Query:  110 APLERTQAPRASASTAEAKTTQYTLDKKPIGGPLTPISSNILVKVRSKDDTSDGGIILPEKAKEKPTEGVVIAMGPGRTHPETGMPVPSPCAVGDKVLYGKYDGTAVDYMGEDHQFVRGQDILFVYAGERMQPDTIKMIRDEILVKVDPEATQSKSGLLLGNKEEDTGSGPSTGEVVAVGPGRTADTGDVVPMTVQTGDLIKFRDFAGSPVKMQGIDYRVMKIEEVLAKW 799
            AP  RT  PR  A +A        LD +PI   L P+S+ +LVK+R     + GGII+PE AK++P +G+ +A+GPGR HPETG  +P     G++V+YG+Y GT + Y  EDH  VR  ++L  Y G+ ++ DT++ + D++LV++  E  Q+ SG++L    E + S    G ++  GPGR +  G+ +PM V+  D IKFR++ G  V ++G +Y V++  ++LAKW
Sbjct:   10 APSARTP-PRGLAVSAAETDVPPNLDGRPITSDLQPVSNFVLVKLRDAMAQTAGGIIMPETAKKRPNDGLAVAVGPGRYHPETGKLMPVSVKAGERVMYGEYMGTKIKYNEEDHVLVREDEVLLRYTGDIIKKDTVEPVGDKVLVEMTKEEKQTASGIVL--SPEASKSRVCEGIILQCGPGRMSSEGETIPMPVKPDDKIKFREYGGEEVNIEGTEYMVVRANDILAKW 236          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1015.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7K5_9PHAE2.350e-11272.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YMZ7_9STRA2.530e-7555.45Chaperonin 10-like protein n=1 Tax=Tribonema minus... [more]
W7TNB8_9STRA3.670e-5848.3420 kDa chaperonin n=2 Tax=Monodopsidaceae TaxID=42... [more]
A0A8J2WID0_9STRA6.210e-5645.24Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
K0T1C8_THAOC1.170e-5344.17Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
D7FNY7_ECTSI6.010e-5180.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YHA6_9STRA2.060e-5042.31Chaperonin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A1Z5KFF1_FISSO1.240e-4942.23Chaperonin GroES n=2 Tax=Fistulifera solaris TaxID... [more]
B8CCQ7_THAPS4.770e-4943.20Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7R9UAA2_9STRA1.190e-4839.57Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1015contigA-nodosum_M_contig1015:125201..129487 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog159749.K0T1C8
PFAMsCpn10
Model size981
Max annot lvl2836|Bacillariophyta
KEGG koko:K04078
Hectar predicted targeting categoryother localisation
Exons6
Evalue3.11e-41
EggNOG OGsCOG0234@1|root,KOG1641@2759|Eukaryota,2XGQX@2836|Bacillariophyta
Ec32 ortholog descriptionChaperonin Cpn10
Ec32 orthologEc-10_004830.1
DescriptionBelongs to the GroES chaperonin family
Cds size474
COG categoryO
BRITEko00000,ko03029,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1015.17.1prot_A-nodosum_M_contig1015.17.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1015 125380..127887 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866374.7843285-UTR-A-nodosum_M_contig1015:125200..1253791680866374.7843285-UTR-A-nodosum_M_contig1015:125200..125379Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1015 125201..125379 -
1680866374.8593593-UTR-A-nodosum_M_contig1015:127887..1279231680866374.8593593-UTR-A-nodosum_M_contig1015:127887..127923Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1015 127888..127923 -
1680866374.8707051-UTR-A-nodosum_M_contig1015:128536..1286911680866374.8707051-UTR-A-nodosum_M_contig1015:128536..128691Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1015 128537..128691 -
1680866374.879817-UTR-A-nodosum_M_contig1015:129350..1294871680866374.879817-UTR-A-nodosum_M_contig1015:129350..129487Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1015 129351..129487 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866374.8035662-CDS-A-nodosum_M_contig1015:125379..1255471680866374.8035662-CDS-A-nodosum_M_contig1015:125379..125547Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1015 125380..125547 -
1680866374.8216207-CDS-A-nodosum_M_contig1015:126063..1261501680866374.8216207-CDS-A-nodosum_M_contig1015:126063..126150Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1015 126064..126150 -
1680866374.839309-CDS-A-nodosum_M_contig1015:126938..1270881680866374.839309-CDS-A-nodosum_M_contig1015:126938..127088Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1015 126939..127088 -
1680866374.8502676-CDS-A-nodosum_M_contig1015:127818..1278871680866374.8502676-CDS-A-nodosum_M_contig1015:127818..127887Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1015 127819..127887 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1015.17.1

>prot_A-nodosum_M_contig1015.17.1 ID=prot_A-nodosum_M_contig1015.17.1|Name=mRNA_A-nodosum_M_contig1015.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=158bp
MGPGRTHPETGMPVPSPCAVGDKVLYGKYDGTAVDYMGEDHQFVRGQDIL
FVYAGERMQPDTIKMIRDEILVKVDPEATQSKSGLLLGNKEEDTGSGPST
GEVVAVGPGRTADTGDVVPMTVQTGDLIKFRDFAGSPVKMQGIDYRVMKI
EEVLAKW*
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mRNA from alignment at A-nodosum_M_contig1015:125201..129487-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1015.17.1 ID=mRNA_A-nodosum_M_contig1015.17.1|Name=mRNA_A-nodosum_M_contig1015.17.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4287bp|location=Sequence derived from alignment at A-nodosum_M_contig1015:125201..129487- (Ascophyllum nodosum dioecious)
GAGCCTGCGGAGATCTATATGCACCGCCCTTGTGGTCGCCGTGACCGCAA GTATTGGCCTCGAGGGTGTTTTCGGTTTCTTCCCTCCTCAACCGTCGGCG ACGAGAGCAGCCCCCCTCGAACGAACACAAGCACCTCGTGAGTAGTGTCA TGCCCTGCTCTGTTCTGTCCTATTCTGTCATATCCTGTACTGGGCGGCGC GGCGCGGTGCGACGCGTCTCGATTTCGTTTTTGTTTGTTGTTGCCGCCGT GTCCCTGTTCAATTTTGTATTAATAGGTCATAGCGCCGATGCAGTAACGA ACGGACTGAACACTGATGTTAAAGACTGTCTGTTTGTCCGCGCAAATTTG GAATCACCTCTTCACGAACATCCTTCCCAAATCCGACGTAACCTATTGGA GGAAAATGGAGGGAGTTGGTACGTAAGTGCATTTGCATCTGCCGGGGCGT GTTACATACACCGCCACCTCTCTCTTGCACGAGGCGGACTGGTGCTCCAC CCCGCGGGTGATGACGGAACACCGAACCTCGCGAGAACAGCTTGCGCGCG ACAGTCGAGCGATGAAACCGTGGCTGGAAGCACTCATAACGCGGCACTAC TACTGTTTGTGTTGTGTAGACTCGGGAACCTGGTTGGACCCTTTTGAACT TGCGGCCGGGAGCTTTGCTTGCGCGCCGCGCGGGGCCGCCCGTTTTTTTT GGGGAGGGGGGAGGGGGATCCCTTTTTAGCAACCCTCCCACTACTATTTT ATGTACTGTAATACTGTTGTGTTATGCTACAATCGGCGCACTGCAGGGGC AAGCGCGTCGACGGCGGAGGCGAAGACCACCCAGTACACACTGGACAAAA AGCCCATAGGCGGGCCCCTTACTCCAATCTCGAGTAATATCCTCGTCAAG GTGCGGTCGAAGGACGATACTTCGGACGGGGGGATCATCCTGCCAGAGAA GGTGAGATTTTTTTTTTTTTCTCCCTTCATACTTGTTATAGTCTCTTGTC CCCCGGGCTTTATTTTACTGCGCAGATCTCCGGCTAGGGGCGTGCGTCGA ATCGTCCACCGCTCCTCGGTCGGCTGTGATCGTCAAGGCATCATCCTATC CAGAGATTGCACGCTAGACACAATCGTCTGACTCCAATCGCCTTTGGCTG ATACGGCGAGGGACTCGAGAGGTCAGCGGACGCCGTGCGACGCGTTCGTA TGCTACAGTAGACATTACAGGAAGCCATCTGGTTGTATTGACATAATAAC ACAACGAACAAGTGTATTGGTACCAAACAATTGTACTAGTACCAAACAAG TGTACTAGTACCAAACAAGTGTACAAGTATCAAACAAGTGTACTAGTGCC AAACAAGTGTACCTGGGAACCTTTTCTTTTCCCACTTAGAAGGGAGGATA TTTCGCCTTCGGCGCCAGCAAAGCCATGATTCTGTCCCAGGTCGCATCCA ACCTGGAAGAAGAAAAAAAATGCCCAGAGTTAGCGTAGTTAAATCTCGGC AAATCGTCACTCGCCTCTGCTCTCCCCTGTGCAACTCCTTGACGGCGTCT GCATCCACATGCAGGCGAAAGAAAAGCCCACCGAGGGTGTGGTGATCGCG ATGGGCCCAGGCAGGACACACCCCGAGACGGGAATGCCAGTTCCGTCGCC TTGCGCCGTGGGGGACAAGGTGACAAGGTTGACCTATTAATAGCTCACTT ATTTCGCGCCGTTCGTTCGCGTTGTATTGTATATCATAGGTCAGAGAGGG GGGTAGCCGCCCATGGCCGGAAGACGCGTCCGCCCTTGCTAGGATTGCTA CTTTTTGTTTCGGTCCGGAGGAGTTTTCTACTATGGTAGTTGGTGGTCCC AGGCTTTAAATAAACTTGGTCTTGGGCGCGCCCAGGGTGCGGAGAGATCG TGCAGAAAAGTGGGTTGATGGGGGGGGAGGGGGTTGGCTAAGACATTCCC CAACGCCCGTCCGCATGTCCCGTGAATCAACTGCTGCTTGAGCCCCCGCC AGATGTCTGATTTGAAGACCCCCCCCCCCGCCAAGCATTGCCTCTTCAGC TTCAGCAGCAAATCTTTTCGTGACCACGTTTTAGCCTCTTGAGGTCAACG TCTGTTGCCTGCTGTTCGTGTGGCTGCATCGTTATAATAATAATATATCC CCACACCTACCTATACACGCAAGTGCTGTATTATATTATGTAGTTAATAA GTTCACGCGCGGCAAGCGTTTCAAAAATGAAAGTTGACCTCCGCTTAACT TTCTGCGGCAAGCGTTACATGGCGTTACATGGTACTATTCTATTAAAGAC AGGGTGAAGGATGCTACGGATAGACTGCTTGCATGATGCGTTTGCCTCTT CGGTGTGTTTGTCTGTGGGGTGGGGGCTATCGTCCCTGCTGAAACCCAGG TGCTGTACGGCAAGTACGATGGCACCGCCGTGGACTACATGGGCGAGGAC CACCAGTTCGTTCGCGGTCAGGACATCCTCTTCGTCTACGCGGGGGAGCG GATGCAGCCGGACACGATTAAGATGATCCGAGATGAGATCCTCGTCAAGG TACAGTATAATACAGTATAATAGAGTACAAGAGTACAGTAGCTAAAGCTA TAGTTTTACTAGTGTCTTCGGTCAAAAACTGCTGAGAGATGTTGAGGAAA CGCGCACCGGCGCCACAGTCGTTGCTGCTAAATACTGGTAAATACTGCTA TATATGATACGGTAGTACAATGTAACAGGAAAAATAATAGTAATACTTAT AGTACTGCATTTTCAAGGAGAGAAAACGCCTCGTCCCTTACGGACGCTTC GATGGTCTGGCCCGCTGACCTCTTCCTCTGTTATTATTTTTTTTTTGTGT GTTTGTGTTGTTGTTGTTTCTCACATTCAGCGTTTTGGTTGACAACCCGT GTGTGTGTGTGTGTGTGTGTGTGTATTTATTAAATTGCACATAACCGCGC AATCCGGCCCTGTCATCCTAGTGATTCTATGCCACTCGCATTAATCCTCC CAAGGGGGGATCAATGATACTTGTTAAAAACCTCTGATCAAACGCGACAA AGGGTGTGTGTGTGTGTGTGTATTTATTAAATTGCACATAACCGCGCAAT CCGGCCCTGTCATCCTCGTCATTCTACGCCACTCGCATTGATCCTCCCAA GGTGTGTGTGTGTGTGTGTGTGTGTATTTATTAAATTGAACATAACCGCG CAATCCGGCCCTGTCATCCTAGTCATTCTATGCCACTCGCATTGATGTGT GTCTGTGTGTGTGCTGTCTCGTGGGCCGCACGCGTTTGTTGACCGATCGG CCGCCGTCGCATGGGGGGGGGGGGCGTTGGCAAAAAGGTTGACCCCGAGG CGACTCAGTCGAAATCGGGGCTTTTGCTGGGGAATAAGGAAGAAGACACA GGCTCCGGCCCAAGCACTGGCGAGGTACTCGGACAGAACAAAAAGCATCG CACGCACCTCCATATATTGTCTCACCTTCCTTCTTTCGACCCCCGAGTTG CTTGCGTGCCACCACTGCGCGGTGGCGGACGTGTATTTTTTATCTGCGCA CTCTGCAACCTCTCTCTGCACTTTGCCGATCGTGGGAACACCCACAAGAG TATAATATACTGTAAATAGACTGTAAATAGAGCACGGACGTTGGGAAAGG AAAAAGGCAATGTCCCTCTCGCAGTTTTCTTTCTTTCGGAGCTTATCTCG CCCATGAAACGCATTGCCTCGCCGACCTTTTGCCTTCTTTAGTCTCCGCG TGTTTCCTTGATCTGTCGAACGGCCTCGACGGTGCCACCAGAATCCTGCG GCTGATTCGGGAGCCCGCAGATGTCCCACAGCAGCGCGGCGTCGTCTTCC GCCTGATCGTCATTTTTCTAGCCACCCCCCCCCTTGCTTGATGCTGAACC GCCGTCGCCGCAATCACCACTCTTATTCCGCCATGAACAGGTGGTGGCCG TCGGCCCGGGGCGAACTGCGGATACCGGAGACGTGGTCCCCATGACGGTC CAGACCGGCGACCTTATCAAGTTCCGCGATTTCGCGGGGTCCCCGGTGAA GATGCAGGGGATCGACTACCGCGTCATGAAGATCGAGGAGGTGCTCGCAA AGTGGTGACGGAGGGCTGAGCGGTTGACGGAGTGTGACCATGACGTGACC GCTCTCTTTTTCTAAGACGATTTTTTTTATGGCCGCTCTTCTATTTTTGA AGACGATTTTTTTTTGTCTTCTGGTCTAGCTATTGATAGTACTGTACTTG GGGGTAGTTTCTCCCGGCAAAGGATCAATAAGGCGCC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1015:125201..129487-

>mRNA_A-nodosum_M_contig1015.17.1 ID=mRNA_A-nodosum_M_contig1015.17.1|Name=mRNA_A-nodosum_M_contig1015.17.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=474bp|location=Sequence derived from alignment at A-nodosum_M_contig1015:125201..129487- (Ascophyllum nodosum dioecious)
ATGGGCCCAGGCAGGACACACCCCGAGACGGGAATGCCAGTTCCGTCGCC
TTGCGCCGTGGGGGACAAGGTGCTGTACGGCAAGTACGATGGCACCGCCG
TGGACTACATGGGCGAGGACCACCAGTTCGTTCGCGGTCAGGACATCCTC
TTCGTCTACGCGGGGGAGCGGATGCAGCCGGACACGATTAAGATGATCCG
AGATGAGATCCTCGTCAAGGTTGACCCCGAGGCGACTCAGTCGAAATCGG
GGCTTTTGCTGGGGAATAAGGAAGAAGACACAGGCTCCGGCCCAAGCACT
GGCGAGGTGGTGGCCGTCGGCCCGGGGCGAACTGCGGATACCGGAGACGT
GGTCCCCATGACGGTCCAGACCGGCGACCTTATCAAGTTCCGCGATTTCG
CGGGGTCCCCGGTGAAGATGCAGGGGATCGACTACCGCGTCATGAAGATC
GAGGAGGTGCTCGCAAAGTGGTGA
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