prot_A-nodosum_M_contig995.18.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig995.18.1
Unique Nameprot_A-nodosum_M_contig995.18.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length208
Homology
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: D8LC75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC75_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 1.290e-57
Identity = 129/198 (65.15%), Postives = 139/198 (70.20%), Query Frame = 0
Query:    1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAMEKSRKECEXXXXXXXXXXXXXXXXXXEGPAK---QARTEGAPKDSSSGSAGSGGSASDSGAT-----EEFVYIPLKDQAALGGDGGAPAAFKNDGSFLERMKKEL 190
            MGRYTTVQAYSDNNPKLVHVSYDQAKGKD+ +GKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRR E+HRVAAM+E A+  EA AKLHEA+EK + ECE      XXXXXXXXXXXX        QA+T        S                    +EFVYIP  D A  GGDGG+   FKNDGSFLE MKKEL
Sbjct:    1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDNDEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEEAQVAEATAKLHEAIEKGKNECEERTRKKXXXXXXXXXXXXXXXXXXXXQAKTGAXXXXXPSXXXXXXXXXXXXXXXXXXXEDEFVYIPEADLATAGGDGGS--GFKNDGSFLEMMKKEL 196          
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A835YZ44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ44_9STRA)

HSP 1 Score: 100 bits (250), Expect = 4.880e-23
Identity = 55/94 (58.51%), Postives = 66/94 (70.21%), Query Frame = 0
Query:    1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAME 94
            MGRYTTVQAYSD+NPK+  VSY+QA    +    A G+L  +K D VMGS AGAGSGEFH YRA RR EIHR+AA+E +AK +E    L   +E
Sbjct:    1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTASGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIE 94          
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A6S9D7T2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9D7T2_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.110e-22
Identity = 82/199 (41.21%), Postives = 93/199 (46.73%), Query Frame = 0
Query:    1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAGGKLVV--EKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAMEKSRKECEXXXXXXXXXXXXXXXXXXEGPAKQARTE----GAPKDSSSGSAGSGGSASDSGATEEFVYIPLKDQAALGGDG--GAPAAFKNDGSFLERMKKELA 191
            MGRYTTVQAY+DNNP +  VSYDQA GK +      G   V  EK D   GS AGAGSGEFH YR  R  E+ R+A +E     EE    LHE  EK + E E            X              +    G  +D + G    GG        EEF Y P   Q    GD        FKNDGSFLE MKK+LA
Sbjct:    1 MGRYTTVQAYADNNPNMRSVSYDQATGKTEPSSSTAGAGAVKPEKVDNPYGSTAGAGSGEFHVYRHARSREMARMAQLEY----EEKQQLLHEDFEKRKHEMETEEERKTAKRRKXRMRGKXXXXXXXNMKLGGVGLQEDGTGGENLEGGE-------EEFEYTPTHRQIENKGDNDDAEKIEFKNDGSFLEMMKKKLA 188          
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A7S2V2K9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2K9_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 9.610e-21
Identity = 55/110 (50.00%), Postives = 72/110 (65.45%), Query Frame = 0
Query:    1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDG----DGKA-----GGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAMEKSRKECE 101
            MGRYTTVQ Y+DNNPK+V VSY QA G+D      DG A      GK+ V K D VMGS AGAGSG+FH+YRA R  EI R+ A+E  A++++   +    +++ R+ CE
Sbjct:    1 MGRYTTVQTYTDNNPKVVQVSYAQAVGQDKATRAQDGGAMVEQKSGKVKVPKVDNVMGSTAGAGSGDFHSYRATRMREIKRMEAIEAGARQDDLVEEFQHRLQQKRQSCE 110          
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A4D9D064_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D064_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.400e-16
Identity = 46/80 (57.50%), Postives = 55/80 (68.75%), Query Frame = 0
Query:    1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESA 80
            MGRYT+VQAY DNNPK+  V+YD   G +D DG    +  +EK + V GS AGA S  FH YRAHRRTE+ R+A MEE A
Sbjct:    1 MGRYTSVQAYGDNNPKIASVAYD---GGEDRDGNPQ-RSKIEKLENVTGSTAGASSSSFHIYRAHRRTEMARLAEMEEKA 76          
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A0P1A6J8_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6J8_PLAHL)

HSP 1 Score: 79.3 bits (194), Expect = 5.120e-15
Identity = 68/190 (35.79%), Postives = 88/190 (46.32%), Query Frame = 0
Query:    1 MGRYTTVQAYSDNNPKLVHVSYD-QAKGKDDGDGKA---GGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAMEKSRKECEXXXXXXXXXXXXXXXXXXEGPAKQARTEGAPKDSSSGSAGSGGSASDSGATEEFVYIPLKDQAALGGDGGAPAAFKNDGSFLERM 186
            MG YTT+Q +SD + +   V+YD  +  KD  D  +   GGKLVV + D V GS AGAGSGEFHTYRA RR E+ R+A+ME+  K  +A  +  +   K +++ E              XXX    AK +  E                          V   L  +  L   GG P    NDGSFLE M
Sbjct:    1 MGCYTTLQTFSDQDAQGAAVAYDADSNAKDSSDAASNVKGGKLVVNRVDNVSGSSAGAGSGEFHTYRAARRREMDRIASMEQQYKDNKAQQEFED---KRKRKAEIFEAKMQKRTEKRRXXXERAKAKTSEIE------------------------SVVNTVLSKEKMLETPGGVPE-IPNDGSFLETM 162          
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A7S2HD40_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HD40_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 3.310e-14
Identity = 49/111 (44.14%), Postives = 62/111 (55.86%), Query Frame = 0
Query:    1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGD----------GKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAMEKSRKECE 101
            MGRYTTVQAY+DNNP +  VSYDQA G+              G   G +  EK D   GS AGAGSGEFH YR  R  E+ R+A +E + K +     L E  +K +++ E
Sbjct:    1 MGRYTTVQAYADNNPSMRSVSYDQATGRSSSGVAAAASSSATGPGSGSVKPEKVDNPYGSTAGAGSGEFHVYRHARSREMARMAQLEHAEKNQ----LLEEEFQKKKRDLE 107          
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A225X3R8_9STRA (RNA-binding protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3R8_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.770e-13
Identity = 46/91 (50.55%), Postives = 57/91 (62.64%), Query Frame = 0
Query:    1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAGG------KLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEA 85
            MGRYT+VQ +SD + +   V+YD A  KD+    A G      K  V + D V GS AGAGSG+FHTYRA RR E+ RVAAME+  K  +A
Sbjct:    1 MGRYTSVQTFSDQDAQGAAVTYDAAS-KDESSAAASGADAKDGKFHVNRVDNVSGSSAGAGSGDFHTYRASRRREMERVAAMEQRYKDNKA 90          
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: K0SVX4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVX4_THAOC)

HSP 1 Score: 76.3 bits (186), Expect = 2.000e-13
Identity = 94/231 (40.69%), Postives = 114/231 (49.35%), Query Frame = 0
Query:    1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDD-------GDGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHR---VAAMEESAKKEEAAAKLHEAMEKSRKECEXXXXXXXXXXXXXXXXXXEGPAKQARTEGAPKDSSSGSAGSGGSASDSGATEEFVYIPLKDQAALGGDGGAPAA------------------------------FKNDGSFLERMKKELA 191
            MGRY++VQA++DNN  +  VSY+QA G+          D  + G +  EK     GS AGAGSGEFHTYR  R  E+ R   + A E   K +E   K  +AM  S  E E    XXXXXXXXXXXXXX    K  +  G  +  SSG+ G   SA D    EEF Y P+   +A GGD   PA                               F NDGSFLE+MKK+LA
Sbjct:    1 MGRYSSVQAFADNNANMRSVSYEQATGQXXXXXXXXXADSASRGPVQAEKVHNPYGSTAGAGSGEFHTYRHARAREMARWKKINADEAEKKAQEEFTK--KAMHDSNVEEEKTEKXXXXXXXXXXXXXXX---KNLKLGGVGEGVSSGAGGISTSAIDE---EEFEYTPI---SAPGGDDKLPAIPNDKQKDDNNSSCRDGINDDTKTKDGDDVPFANDGSFLEQMKKQLA 220          
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Match: A0A484DQI6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQI6_BRELC)

HSP 1 Score: 74.7 bits (182), Expect = 2.750e-13
Identity = 42/81 (51.85%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAG----GKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRTEIHRVAAME 77
            MGRYTTVQ +SD + ++  V+YD    + +  G       GKL V + D V GS AGAGSGEFH+YRA RR E+ RVA ME
Sbjct:    1 MGRYTTVQTFSDQDAQVATVAYDATVKEKEPSGTTSEIKDGKLHVNRVDNVSGSSAGAGSGEFHSYRAARRREMERVAVME 81          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig995.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC75_ECTSI1.290e-5765.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YZ44_9STRA4.880e-2358.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9D7T2_9STRA3.110e-2241.21Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S2V2K9_9STRA9.610e-2150.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D064_9STRA2.400e-1657.50Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A0P1A6J8_PLAHL5.120e-1535.79Uncharacterized conserved protein n=1 Tax=Plasmopa... [more]
A0A7S2HD40_9STRA3.310e-1444.14Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A225X3R8_9STRA1.770e-1350.55RNA-binding protein n=1 Tax=Phytophthora megakarya... [more]
K0SVX4_THAOC2.000e-1340.69Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A484DQI6_BRELC2.750e-1351.85Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..106
NoneNo IPR availablePANTHERPTHR13507:SF0PRKR-INTERACTING PROTEIN 1coord: 30..148
IPR009548PRKR-interacting protein 1PFAMPF06658DUF1168coord: 38..140
e-value: 2.1E-24
score: 85.9
IPR009548PRKR-interacting protein 1PANTHERPTHR13507UNCHARACTERIZEDcoord: 30..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig995contigA-nodosum_M_contig995:78828..84215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig995.18.1mRNA_A-nodosum_M_contig995.18.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig995 74201..84636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig995.18.1 ID=prot_A-nodosum_M_contig995.18.1|Name=mRNA_A-nodosum_M_contig995.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=208bp
MGRYTTVQAYSDNNPKLVHVSYDQAKGKDDGDGKAGGKLVVEKTDQVMGS
CAGAGSGEFHTYRAHRRTEIHRVAAMEESAKKEEAAAKLHEAMEKSRKEC
EERTRKKAEKRKRKKQAKREGPAKQARTEGAPKDSSSGSAGSGGSASDSG
ATEEFVYIPLKDQAALGGDGGAPAAFKNDGSFLERMKKELAGRDLDSSGG
SKAVAAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009548Prkrip1