prot_A-nodosum_M_contig984.19.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig984.19.1
Unique Nameprot_A-nodosum_M_contig984.19.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length470
Homology
BLAST of mRNA_A-nodosum_M_contig984.19.1 vs. uniprot
Match: D8LDN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN9_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 6.700e-106
Identity = 206/487 (42.30%), Postives = 280/487 (57.49%), Query Frame = 0
Query:    1 VTEPEECESGSPRVPDYLQTKNTLPDWEYLGAAWKACYEGYRCEAWWGSLDGTTVTDEPIVLDAPLDWPDCCALCSKNDKNAL----ASSECVGWSFEPSTGGCQLMSTVSSTSGETGWGY---NKTVSGYPGYFEPPVSGCWSRTQFDLCRNMDLALIIPGCFVSFIGLALILWT--WTTESSRSRHLRNL-LKDTRGSRLEKVRPVQVKVERFVTSYPGKYKSEYGYGYTFTGTFATRDGRLMEVPSRGTVIRRDRKGAPTERYLEWEMLKVLFGTNLQPLSDPAVAANRLQTPDGLRSTFQLLASRVDKQLLDDQFSPIGFFRYSGTQTRSSPEV-----GSIGGRFHCLLLIN-DNNGRSAQASPAPT-VLLVGILDEDRITCVTAALRGYLRYTISGGLFCLFVGISLFTTLGVVLLTNEAAQVMASFTFPATNYRKGAYAGFAFCFCIPLAIWLRGLYRRAELMRLAKAFPGVAESGQEVS 470
            VT P +C   SP +P+  +T NTLP+WE LGAAWK CY+GYRCEAWWG L+G+    EP+VLDAPLDWPDCCALCS +          +S CV WSF+PSTG CQ MSTV+  S +  WG    N T+SGYPGYFE P++ CW R+Q+DLC N + A IIPG  V+FI L   +W   +   S+R+  LR L ++  + SRL KV   +V   + V S  GK  ++  Y  T+ GTF TRDG +  +P      RR  K     R +E  ML VL  T   P +DP++A  R +TPDGLR+ F  +   V ++  +   S   F+R   +     P V      ++  RF C+LL+  +  GR+      PT VLLVGIL EDRITCV   + G          FC  +  +L   + + LLTNEAAQ MA++TF   ++R GA  G   C C+PL++++    +  +L+R  +  P VAES + ++
Sbjct:   54 VTSPPDCPGESPYIPEGFKTDNTLPEWEALGAAWKECYDGYRCEAWWGGLEGSP-DGEPVVLDAPLDWPDCCALCSGSGSXXXXXXXTTSTCVAWSFDPSTGSCQRMSTVAEPSYDYSWGAWNSNNTISGYPGYFEAPLTDCWGRSQYDLCVNTNAAFIIPGVIVAFISLC-CMWASGFCAPSARAGLLRELAIEQPQSSRLVKVACAEVACTKTVKS-TGKGGTKITY--TYNGTFVTRDGAVFNLPP---PTRRP-KMHEASRRIEKRMLSVLHNTKRNPRADPSLA-RRCETPDGLRAEFSKMVRAVPRKP-EASRSGGSFYR---SHVLGHPNVPVERDAAVDHRFDCILLVGTEEPGRT------PTKVLLVGILGEDRITCVGEDVLGASVADFCCASFCFVLAAALLFIMCITLLTNEAAQNMAAWTFEG-DHRVGAIIGLVLCTCVPLSLFVWKCRKSGKLLRSIRECPLVAESDRVIN 519          
BLAST of mRNA_A-nodosum_M_contig984.19.1 vs. uniprot
Match: A0A6H5KRC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC3_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 3.260e-76
Identity = 177/476 (37.18%), Postives = 229/476 (48.11%), Query Frame = 0
Query:    1 VTEPEECESGSPRVPDYLQTKNTLPDWEYLGAAWKACYEGYRCEAWWGSLDGTTVTDEPIVLDAPLDWPDCCALCSK--NDKNALASSECVGWSFEPSTGGCQLMSTVSSTSGETGWG---YNKTVSGYPGYFEPPVSGCWSRTQFDLCRNMDLALIIPGCFVSFIGLALILWTWTTESSRSRHLRNLLKDTRGSRLEKVRPVQVKVERFVTSYPGKYKSEYGYGYTFTGTFATRDGRLMEVPSRGTVIRRDRKGAPTERY-LEWEMLKVLFGTNLQPLSDPAVAANRLQTPDGLRSTFQLLASRVDKQLLDDQFSPIGFFRYSGTQTRSSPEVGSIGGRFHCLLLINDNNGRSAQASPAPTVLLVGILDEDRITCVTAALRGYLRYTISGGLFCLFVGISLFTTLGVVLLTNEAAQVMASFTFPATNYRKGAYAGFAFCFCIPLAIWLRGLYRRA-ELMRLAKAFPGVAESGQEV 469
            VT P +C   S  +P+  +T NTLP+WE  GAAWK   E  RC+AWWG L G+    EP+VLDAPLDWPDCCALCS   +D  A   + C  WSF+PSTG CQ MS V STS    WG   Y  TV GYPGYFE P++ CWSR ++DLC N  + LI+PG FV+F  +  + +    +    +  +  +K                                 Y YT+ GTFA  DG L  +P    +       AP   + +E  ML+VL+ TNL P +DP VA+    + D           +  +Q+                   S+P V               ++ R         VLLVGIL EDRITC+   L G      S   FCL +   +  T+ V LLTNEAAQ MA +TF   +YR GA  G     C+PL+      YR + +L RL K  P VAES + V
Sbjct:   33 VTSPPDCPGDSLYIPEGFKTDNTLPEWEDEGAAWK---EWDRCDAWWGGLGGSP-NGEPVVLDAPLDWPDCCALCSGGGDDDGANTETTCAAWSFDPSTGSCQRMSAVESTSQNNTWGAWQYKGTVKGYPGYFEAPINDCWSRMKYDLCVNPSMGLIVPGMFVAFWSILCMYFPVGCQKLAQKSGKGGIK---------------------------------YFYTYKGTFAACDGALFVLPPPTRL-----SNAPRSSHKIEKRMLRVLYNTNLNPRADPGVASRAGDSCD-----------KRKRQI-------------------SNPIV--------------PHDAR---------VLLVGILGEDRITCIDHELLGSSSCCRSCASFCLVLAAVMLVTMCVALLTNEAAQHMAEWTFEG-DYRIGAVVGLMLRSCVPLSFAWN--YRNSNKLFRLVKDCP-VAESDRVV 409          
BLAST of mRNA_A-nodosum_M_contig984.19.1 vs. uniprot
Match: A0A6H5K6X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6X7_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.740e-33
Identity = 67/130 (51.54%), Postives = 84/130 (64.62%), Query Frame = 0
Query:    1 VTEPEECESGSPRVPDYLQTKNTLPDWEYLGAAWKACYEGYRCEAWWGSLDGTTVTDEPIVLDAPLDWPDCCALCSKNDKN----ALASSECVGWSFEPSTGGCQLMSTVSSTSGE---TGWGYNKTVSG 123
            VT P +    SP +P+  +T NTLP  E  GAAWK CY+G RC+AWWG L+G+    EP+VLDAPLDWPDCCALC+    N    +  +S CV WSF+PSTG CQ M TV  TS +   T W  + T++G
Sbjct:   13 VTSPPDFPGESPYIPEGFKTDNTLPLREANGAAWKECYDGNRCDAWWGGLEGSP-DGEPVVLDAPLDWPDCCALCNGGGDNDGDGSGTNSTCVAWSFDPSTGWCQRMPTVEETSYDYSWTTWQNSNTING 141          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig984.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDN9_ECTSI6.700e-10642.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRC3_9PHAE3.260e-7637.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6X7_9PHAE1.740e-3351.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig984contigA-nodosum_M_contig984:282833..284576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig984.19.1mRNA_A-nodosum_M_contig984.19.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig984 282833..284576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig984.19.1 ID=prot_A-nodosum_M_contig984.19.1|Name=mRNA_A-nodosum_M_contig984.19.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=470bp
VTEPEECESGSPRVPDYLQTKNTLPDWEYLGAAWKACYEGYRCEAWWGSL
DGTTVTDEPIVLDAPLDWPDCCALCSKNDKNALASSECVGWSFEPSTGGC
QLMSTVSSTSGETGWGYNKTVSGYPGYFEPPVSGCWSRTQFDLCRNMDLA
LIIPGCFVSFIGLALILWTWTTESSRSRHLRNLLKDTRGSRLEKVRPVQV
KVERFVTSYPGKYKSEYGYGYTFTGTFATRDGRLMEVPSRGTVIRRDRKG
APTERYLEWEMLKVLFGTNLQPLSDPAVAANRLQTPDGLRSTFQLLASRV
DKQLLDDQFSPIGFFRYSGTQTRSSPEVGSIGGRFHCLLLINDNNGRSAQ
ASPAPTVLLVGILDEDRITCVTAALRGYLRYTISGGLFCLFVGISLFTTL
GVVLLTNEAAQVMASFTFPATNYRKGAYAGFAFCFCIPLAIWLRGLYRRA
ELMRLAKAFPGVAESGQEVS
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